View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15158_low_3 (Length: 259)
Name: NF15158_low_3
Description: NF15158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15158_low_3 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 48021049 - 48021299
Alignment:
| Q |
1 |
ctttgataaactactctttgctctacgcagtttatgttgtttaaggtttgaatgtagtacacaatttgagatgaatcacttgttagtgttgattaagaat |
100 |
Q |
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| T |
48021049 |
ctttgataaactactctttgctctacacagtttatgttgtttaaggtttgaaggtggtacacaatttgagatgaatcacttgttagtgttgattaagaat |
48021148 |
T |
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| Q |
101 |
accaatttgtctcaagtttctcaaccgtttcacttatgattagttagttagttagtttctcaagtctcaatttctcaagtatatctcaggctcttagctg |
200 |
Q |
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| T |
48021149 |
aacaatttgtctcaagtttctcaaccgtttcacttatga--------ttagttagtttctcaagtctcaatttctcaagtatatctcaggctcttagctg |
48021240 |
T |
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| Q |
201 |
tagagtgtttgaacttgatcatcgccaaacctaatgcgattatgttttgattttgatga |
259 |
Q |
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| T |
48021241 |
tagagtgtttgaacttgatcatcgccaaacctaatgcgattatgttttgattttgatga |
48021299 |
T |
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