View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15159_low_5 (Length: 301)
Name: NF15159_low_5
Description: NF15159
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15159_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 18 - 288
Target Start/End: Complemental strand, 7897938 - 7897668
Alignment:
| Q |
18 |
gagacatcattattatgggatttcttgagaaactttgggacgaaacgttggcgggtcccacacctgaaacaggtttgggtaagcttcggaagtacaactc |
117 |
Q |
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| T |
7897938 |
gagacatcattattatgggatttcttgagaaactttgggacgaaacgttggcgggtcccacacctgaaacaggtttgggtaagcttcggaagtacaactc |
7897839 |
T |
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| Q |
118 |
tttttctgctgctagctccggcgtacggttgccgccggtgaaggatcatgatgttcctgttgttactcgtagcattatgattattaggaacactgtttct |
217 |
Q |
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| T |
7897838 |
tttttctgctgctagctccggcgtacggttgccgccggtgaaggatcatgatgttcctgttgttactcgtagcattatgattattaggaacactgtttct |
7897739 |
T |
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| Q |
218 |
gaacctgtttctccttcttcttctgctgccacaacacctcgtacccctaatacacgtacgtaattttattc |
288 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
7897738 |
gaacctgtttctccttcttcttctgctgctacaacacctcgtacccctaatacacgtacgtaattttattc |
7897668 |
T |
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