View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1515_high_10 (Length: 235)
Name: NF1515_high_10
Description: NF1515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1515_high_10 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 15 - 235
Target Start/End: Original strand, 35208516 - 35208736
Alignment:
| Q |
15 |
atattcttcaaaaaccgcacattgatcggggagctaagcacctttcgtttgcaatctaactctcgtaggcaagcaattgcggaaaattctccacataaag |
114 |
Q |
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| T |
35208516 |
atattcttcaaaaaccgcacattgatcggggagctaagcacctttcatttgcaatctaactctcgtaggcaagcaattgcggaaaattctccacataaag |
35208615 |
T |
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| Q |
115 |
ttgtttaccttcgatggcaacttcaatttccaaattttgttccaattcccgacacacgttgttgttgagcttctaaattatgattcatgaattccatgta |
214 |
Q |
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| T |
35208616 |
ttgtttaccttcaatggcaacttcaatttccaaattttgttccaattcccgacacacgttgttgttgagcttctaaattatgattcatgaattccatgta |
35208715 |
T |
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| Q |
215 |
cacactcctgaccatataacc |
235 |
Q |
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| T |
35208716 |
cacactcctgaccatataacc |
35208736 |
T |
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