View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15160_high_3 (Length: 511)
Name: NF15160_high_3
Description: NF15160
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15160_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 393; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 4 - 499
Target Start/End: Complemental strand, 36635441 - 36634942
Alignment:
| Q |
4 |
taatatattacatggaatatgaaacataaaagtaaaataaatattgca-atgatatataaagagattaagaagcatacataaattcatgctgtaggagac |
102 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36635441 |
taatatattacatggaatatgaaacataaaagtaaaataaatattgcatatgatatataaagagattaagaagcatacataaattcatgctgtaggagac |
36635342 |
T |
|
| Q |
103 |
agaatgactaataaataaataaataaactacaaaaggtgcgatgatgggaacatatatagtgtaaatgtgaagtaattaattataa-ttaaaaacctacc |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||| |
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| T |
36635341 |
agaatgactaataaataaataaataaactacaaaaggtgcgatgatgggaacatatatagtgtaaatgtgaactaatcaattataatttaaaaacctacc |
36635242 |
T |
|
| Q |
202 |
accaa-atttcatag-nnnnnnnnntattacagttaagataaaactctactcactagagttagaggtttccactttattatatccacgtaataagtaata |
299 |
Q |
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||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36635241 |
accaatttttcatagaaaaaaaaaatattacagttaagataaaactctactcactagagttagaggtttccactttattatatccacgtaataagtaata |
36635142 |
T |
|
| Q |
300 |
aaaactacatgccgacctacttttgaagcagacataaggnnnnnnnntgttcagttcatactaggtaacagattctatgttgaaacaactttagaaaagt |
399 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |
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| T |
36635141 |
aaaactacatgccgacctacttttgaagcagacataaggaaaaaaaatgttcagttcatactgggtaacagattctatgttgaaacaactttaggaaagt |
36635042 |
T |
|
| Q |
400 |
ttaaagatttgaagacagcatgcaactcttatatacagataattactgtttttagttctctttttccaatgatttgcaggatatcacagcttgtttgttt |
499 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36635041 |
ttaaagatatgaagacagcatgcaactcttatatacagataattactgtttttagttctctttttccaatgatttgcaggatatcacagcttgtttgttt |
36634942 |
T |
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