View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15163_high_113 (Length: 248)
Name: NF15163_high_113
Description: NF15163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15163_high_113 |
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Alignment Details
Target: chr3 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 16 - 238
Target Start/End: Complemental strand, 1289682 - 1289460
Alignment:
| Q |
16 |
cttgtggtgagattaggtgaagagattgtttatggtgcagcttctggcaataatggaccaggggtatgtcatgagaagtttagaaaattaattttatttt |
115 |
Q |
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| T |
1289682 |
cttgtggtgagattaggtgaagagattgtttatggtgcagcttctggcgataatgaaccaggggtatgtcatgagaagtttagaaaattaattttatttt |
1289583 |
T |
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| Q |
116 |
ctggaaatgattatttaggcctgagttcccatccgactattggaaaggctgctgcaaaggtatgccttgtgaattttgaatgatatttttatcttattct |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1289582 |
ctggaaatgattatttaggcctgagttcccatccgactattggaaaggctgctgcaaaggtatgccttgtgaattttgaatgatatttttatcttattct |
1289483 |
T |
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| Q |
216 |
gaattttaatctacgggcctttg |
238 |
Q |
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||||||||||||||||| ||||| |
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| T |
1289482 |
gaattttaatctacgggtctttg |
1289460 |
T |
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