View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15163_high_121 (Length: 239)

Name: NF15163_high_121
Description: NF15163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15163_high_121
NF15163_high_121
[»] chr4 (45 HSPs)
chr4 (14-221)||(27501272-27501479)
chr4 (14-221)||(27498370-27498577)
chr4 (17-222)||(27486941-27487146)
chr4 (17-218)||(27526093-27526294)
chr4 (18-221)||(27513754-27513957)
chr4 (20-221)||(27557450-27557651)
chr4 (17-221)||(27505680-27505884)
chr4 (20-222)||(27444771-27444973)
chr4 (20-222)||(27554270-27554472)
chr4 (17-222)||(27479859-27480064)
chr4 (43-222)||(27431125-27431304)
chr4 (18-221)||(27469419-27469622)
chr4 (17-222)||(27523380-27523585)
chr4 (14-222)||(27476642-27476850)
chr4 (17-221)||(27516587-27516791)
chr4 (127-221)||(27502113-27502207)
chr4 (17-206)||(27466779-27466968)
chr4 (40-197)||(27506679-27506836)
chr4 (17-218)||(27473850-27474051)
chr4 (81-197)||(27412686-27412802)
chr4 (17-218)||(27500319-27500520)
chr4 (18-197)||(27425771-27425950)
chr4 (24-198)||(27565952-27566126)
chr4 (40-197)||(27478885-27479042)
chr4 (40-197)||(27485945-27486102)
chr4 (40-197)||(27497324-27497481)
chr4 (17-198)||(27502808-27502989)
chr4 (24-206)||(27415589-27415768)
chr4 (70-221)||(27460489-27460640)
chr4 (18-197)||(27570051-27570230)
chr4 (43-206)||(27421924-27422091)
chr4 (43-173)||(27527145-27527275)
chr4 (88-206)||(27585717-27585835)
chr4 (43-206)||(17970283-17970446)
chr4 (82-195)||(27489983-27490096)
chr4 (101-197)||(27468329-27468425)
chr4 (101-197)||(27503964-27504060)
chr4 (89-197)||(27563348-27563456)
chr4 (101-206)||(27514933-27515038)
chr4 (43-185)||(27424528-27424670)
chr4 (101-182)||(27524566-27524647)
chr4 (101-197)||(27475581-27475677)
chr4 (43-182)||(27423206-27423345)
chr4 (103-182)||(27508896-27508975)
chr4 (43-185)||(27414318-27414460)
[»] chr5 (4 HSPs)
chr5 (14-221)||(1754220-1754426)
chr5 (43-197)||(1756759-1756913)
chr5 (70-221)||(1759259-1759414)
chr5 (40-182)||(1754669-1754811)
[»] chr3 (11 HSPs)
chr3 (58-206)||(55084785-55084933)
chr3 (43-209)||(38024865-38025031)
chr3 (43-209)||(38031317-38031483)
chr3 (70-197)||(38043914-38044041)
chr3 (43-206)||(50904785-50904948)
chr3 (43-182)||(50911886-50912025)
chr3 (43-207)||(38028758-38028922)
chr3 (43-175)||(38033803-38033935)
chr3 (43-197)||(38036795-38036949)
chr3 (43-207)||(38040073-38040237)
chr3 (43-206)||(48840705-48840867)
[»] chr8 (1 HSPs)
chr8 (43-182)||(21607313-21607452)
[»] chr2 (1 HSPs)
chr2 (43-206)||(3073553-3073716)


Alignment Details
Target: chr4 (Bit Score: 196; Significance: 1e-107; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 27501272 - 27501479
Alignment:
Q  14 ggacatcatcttcaaaaggtgtcgaggttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27501272 ggacatcatcttcaaaaggtgtcgaggttccaaagggatgtctagcagtatatgttggagaggaaatgaaacggtttgtgatcccaatatcatacttaaa 27501371  T
Q  114 ccaaccattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaagacatgttc 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27501372 ccaaccattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcactattccttgtagagaagacatgttc 27501471  T
Q  214 ttagatat 221  Q
    ||||||||    
T  27501472 ttagatat 27501479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 27498370 - 27498577
Alignment:
Q  14 ggacatcatcttcaaaaggtgtcgaggttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaa 113  Q
    ||||||| ||||||||||| || ||  | |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| ||    
T  27498370 ggacatcgtcttcaaaaggcgtggacatgccaaagggatatctagcagtatatgttggagaggaaatgaaacgttttgtgatccctatatcatacttgaa 27498469  T
Q  114 ccaaccattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaagacatgttc 213  Q
    |||||||| ||| |||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||||||||  ||||||||||||||    
T  27498470 ccaaccatcgttccaagacttgttgaaccaagccgaggaacaattcgaatatgatcatccaatgggtggtctcactattccttgcggagaagacatgttc 27498569  T
Q  214 ttagatat 221  Q
    ||||||||    
T  27498570 ttagatat 27498577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 17 - 222
Target Start/End: Original strand, 27486941 - 27487146
Alignment:
Q  17 catcatcttcaaaaggtgtcgaggttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaacca 116  Q
    ||||||||||||||| ||| || ||||||||||||||||||||||| || || |||||| ||||||| ||||||||||||||  ||||||||||||||||    
T  27486941 catcatcttcaaaagctgtggacgttccaaagggatatctagcagtgtacgtaggagagaaaatgaagcggtttgtgatccctttatcatacttaaacca 27487040  T
Q  117 accattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaagacatgttctta 216  Q
    ||||| ||||||||| |||||||||||||| || |||||||||||||| |||||||||| |||||||||  |||||||||| | ||||||||| ||||||    
T  27487041 accatcgtttcaagaattgttgaaccaagctgaagaacaatttgaatatgatcatccaatgggtggtcttactattccttgcaaagaagacattttctta 27487140  T
Q  217 gatatt 222  Q
    ||||||    
T  27487141 gatatt 27487146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 17 - 218
Target Start/End: Complemental strand, 27526294 - 27526093
Alignment:
Q  17 catcatcttcaaaaggtgtcgaggttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaacca 116  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| ||||||| ||||||||||| ||  |||||||||| |||||    
T  27526294 catcatcttcaaaaggtgtcgatgttccaaagggatatctagcagtgtatgttggagagaaaatgaagcggtttgtgattcctgtatcatacttgaacca 27526195  T
Q  117 accattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaagacatgttctta 216  Q
    | | |  || ||||| ||||||| |||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||| | ||||||    
T  27526194 aacctcattccaagaattgttgagccaagctgaggaacaatttgaatatgatcatccaacgggtggtctcactattccttgcagagaagacgttttctta 27526095  T
Q  217 ga 218  Q
    ||    
T  27526094 ga 27526093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 18 - 221
Target Start/End: Complemental strand, 27513957 - 27513754
Alignment:
Q  18 atcatcttcaaaaggtgtcgaggttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaa 117  Q
    |||||||||||||| ||| || || ||||| |||||||||||||| ||||| |||||| ||||||| |||||||||||||||||||||||||| ||||||    
T  27513957 atcatcttcaaaagctgttgacgtgccaaaaggatatctagcagtgtatgtaggagagaaaatgaagcggtttgtgatcccaatatcatacttgaaccaa 27513858  T
Q  118 ccattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaagacatgttcttag 217  Q
     | | ||| ||||| |||||||||||||| || ||||||| |||||| |||||||||| |||||||||| |||||||||| ||||||||  | |||||||    
T  27513857 acctcgttccaagaattgttgaaccaagctgaagaacaatatgaatatgatcatccaatgggtggtctcactattccttgcagagaagaagtattcttag 27513758  T
Q  218 atat 221  Q
    ||||    
T  27513757 atat 27513754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 27557450 - 27557651
Alignment:
Q  20 catcttcaaaaggtgtcgaggttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaacc 119  Q
    |||||||||| ||||| || || |||| ||||||||| || |||||||| ||||||||||||||  |||||||||||||||| |||||||||||||||||    
T  27557450 catcttcaaagggtgtggatgtgccaaggggatatcttgccgtatatgttggagaggaaatgaagaggtttgtgatcccaatgtcatacttaaaccaacc 27557549  T
Q  120 attgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaagacatgttcttagat 219  Q
    ||  |||||||| ||| |||| ||||| ||||||||||||||||| | |||||||| |||||||||| ||||||| || ||||||||  | |||||||||    
T  27557550 atcatttcaagaattgctgaatcaagctgaggaacaatttgaatatgttcatccaatgggtggtctcactattccatgcagagaagatgttttcttagat 27557649  T
Q  220 at 221  Q
    ||    
T  27557650 at 27557651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 17 - 221
Target Start/End: Complemental strand, 27505884 - 27505680
Alignment:
Q  17 catcatcttcaaaaggtgtcgaggttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaacca 116  Q
    ||||||||||||||||| | ||||| |||||||| ||||||||||| || || |||||| ||||||| ||||||||||| ||  |||||||||| |||||    
T  27505884 catcatcttcaaaaggtttggaggtgccaaaggggtatctagcagtgtacgtaggagagaaaatgaagcggtttgtgattcctgtatcatacttgaacca 27505785  T
Q  117 accattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaagacatgttctta 216  Q
    | | |  || ||||| |||||||||||||| ||||||||||||||||| || ||||||| |||||||||| |||||||||| |||||||| || ||||||    
T  27505784 aacctcattccaagaattgttgaaccaagctgaggaacaatttgaatatgaccatccaatgggtggtctcactattccttgcagagaagagattttctta 27505685  T
Q  217 gatat 221  Q
    |||||    
T  27505684 gatat 27505680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 20 - 222
Target Start/End: Complemental strand, 27444973 - 27444771
Alignment:
Q  20 catcttcaaaaggtgtcgaggttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaacc 119  Q
    ||||||||||||| || || || |||||||||||||| |||||||| || ||||||||||||||  ||||||||||||||||||||||||| | |||| |    
T  27444973 catcttcaaaaggcgtggatgtgccaaagggatatcttgcagtatacgttggagaggaaatgaagaggtttgtgatcccaatatcatacttgagccaatc 27444874  T
Q  120 attgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaagacatgttcttagat 219  Q
    ||  |||||||| || ||||| ||||||||||||||||| | ||| || ||||||| |||||||||| | |||||||| ||||||||| | |||||||||    
T  27444873 atcatttcaagaattattgaatcaagccgaggaacaattcggatatgaccatccaatgggtggtctcacaattccttgcagagaagacgttttcttagat 27444774  T
Q  220 att 222  Q
    |||    
T  27444773 att 27444771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 20 - 222
Target Start/End: Original strand, 27554270 - 27554472
Alignment:
Q  20 catcttcaaaaggtgtcgaggttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaacc 119  Q
    ||||||||||||| || || || ||||||||||| || ||||||||||| |||||||||||||| |||||||||||  |||| || |  |||| ||||||    
T  27554270 catcttcaaaaggagtggatgtgccaaagggataccttgcagtatatgttggagaggaaatgaagcggtttgtgatatcaatttctttgttaagccaacc 27554369  T
Q  120 attgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaagacatgttcttagat 219  Q
    || ||||||||| ||| |||| ||||| ||||||||||||| ||| ||||||||||||||| ||||| | |||||||||||||||||| | |||||||||    
T  27554370 atcgtttcaagaattgctgaatcaagctgaggaacaatttggatatgatcatccaacgggtagtctcacaattccttgtagagaagacgttttcttagat 27554469  T
Q  220 att 222  Q
    |||    
T  27554470 att 27554472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 17 - 222
Target Start/End: Original strand, 27479859 - 27480064
Alignment:
Q  17 catcatcttcaaaaggtgtcgaggttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaacca 116  Q
    ||||||||||||||||| | || || ||||| || |||||||||||||| || |||||| ||||||| || |||||||| ||  |||||||||| |||||    
T  27479859 catcatcttcaaaaggtttggacgtgccaaaaggctatctagcagtatacgtaggagagaaaatgaagcgttttgtgattcctgtatcatacttgaacca 27479958  T
Q  117 accattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaagacatgttctta 216  Q
    | |||  || ||| | |||||||||||||| ||||||||||||||||| |||||||||| |||||||||| | |||||||| ||||||||||| ||||||    
T  27479959 aacatcattccaaaagttgttgaaccaagctgaggaacaatttgaatatgatcatccaatgggtggtctcaccattccttgcagagaagacattttctta 27480058  T
Q  217 gatatt 222  Q
    ||||||    
T  27480059 gatatt 27480064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 43 - 222
Target Start/End: Complemental strand, 27431304 - 27431125
Alignment:
Q  43 ccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaacc 142  Q
    |||||||||||| | ||||||||||| || || ||||||||  ||||||||||||||||||||||||| |||||||| |  |||||||| |||||||| |    
T  27431304 ccaaagggatatattgcagtatatgttggggatgaaatgaagaggtttgtgatcccaatatcatacttgaaccaaccgtcatttcaagaattgttgaatc 27431205  T
Q  143 aagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaagacatgttcttagatatt 222  Q
    |||||||||||||||||| ||| || |||||||| ||||||||| | |||||||| ||||||||| | |||||| |||||    
T  27431204 aagccgaggaacaatttggatatgaccatccaaccggtggtctcacaattccttgcagagaagacgttttcttaaatatt 27431125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 221
Target Start/End: Original strand, 27469419 - 27469622
Alignment:
Q  18 atcatcttcaaaaggtgtcgaggttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaa 117  Q
    |||||||||||||| ||| || ||||||||||||||||||||||| || || |||||| ||||||| |||||||||||||| |||||||| || || |||    
T  27469419 atcatcttcaaaagctgtggacgttccaaagggatatctagcagtgtacgtaggagagaaaatgaagcggtttgtgatccctatatcatatttgaagcaa 27469518  T
Q  118 ccattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaagacatgttcttag 217  Q
     |||  || |||||  |||||| |||||| || |||||||||||||| || ||||||| |||||||||  |||||||||| |||||||| || |||||||    
T  27469519 acatcattacaagaactgttgagccaagctgaagaacaatttgaatatgaacatccaatgggtggtctaactattccttgcagagaagaaattttcttag 27469618  T
Q  218 atat 221  Q
    ||||    
T  27469619 atat 27469622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 222
Target Start/End: Complemental strand, 27523585 - 27523380
Alignment:
Q  17 catcatcttcaaaaggtgtcgaggttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaacca 116  Q
    ||||||||||||||| ||| || ||||||||||| ||||||||||| || || |||||| ||||||| ||||||||||| ||  ||||||| || |||||    
T  27523585 catcatcttcaaaagctgtggacgttccaaagggctatctagcagtgtacgtaggagagaaaatgaagcggtttgtgattcctgtatcatatttgaacca 27523486  T
Q  117 accattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaagacatgttctta 216  Q
    | | |  || ||||| ||||||| | |||||||||||||||||||||| || ||||||| |||||||||  |||||||||| | ||||||||| ||||||    
T  27523485 aacttcattccaagaattgttgagcgaagccgaggaacaatttgaatatgaccatccaatgggtggtctaactattccttgcaaagaagacattttctta 27523386  T
Q  217 gatatt 222  Q
    ||||||    
T  27523385 gatatt 27523380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 222
Target Start/End: Original strand, 27476642 - 27476850
Alignment:
Q  14 ggacatcatcttcaaaaggtgtcgaggttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaa 113  Q
    |||||||||||||||||   || || ||||||||||||||||||||||| ||||| || ||| ||||||| ||||||||||| ||  |||||||||| ||    
T  27476642 ggacatcatcttcaaaaaccgtggacgttccaaagggatatctagcagtgtatgttggtgagaaaatgaagcggtttgtgattcctgtatcatacttgaa 27476741  T
Q  114 ccaaccattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaagacatgttc 213  Q
    |||| | |  || |||||  || ||| ||||   ||||||||||||||||| |||||||||| |||||||||  |||||||||| ||||||||||| |||    
T  27476742 ccaaacctcattccaagaactgctgagccaaagtgaggaacaatttgaatatgatcatccaatgggtggtctaactattccttgcagagaagacattttc 27476841  T
Q  214 ttagatatt 222  Q
    || ||||||    
T  27476842 ttggatatt 27476850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 221
Target Start/End: Complemental strand, 27516791 - 27516587
Alignment:
Q  17 catcatcttcaaaaggtgtcgaggttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaacca 116  Q
    ||||||||||||||  ||| |  |||||||||||||||||||| || ||||| ||| |||| |||||  | ||||||||||| |||||||| || || ||    
T  27516791 catcatcttcaaaatctgtgggcgttccaaagggatatctagctgtgtatgtaggaaaggacatgaagagatttgtgatccctatatcatatttgaagca 27516692  T
Q  117 accattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaagacatgttctta 216  Q
    |  ||  || ||||| |||||||||||||| ||||||||||||||||| || ||||||| ||| |||||| |||||||||| | ||||||  | ||||||    
T  27516691 aaaatcattccaagaattgttgaaccaagctgaggaacaatttgaatatgaccatccaatggggggtctcactattccttgcaaagaagaagttttctta 27516592  T
Q  217 gatat 221  Q
    |||||    
T  27516591 gatat 27516587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 127 - 221
Target Start/End: Complemental strand, 27502207 - 27502113
Alignment:
Q  127 caagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaagacatgttcttagatat 221  Q
    ||||| |||||||||||||| ||||||||||||||||| |||||||||| |||||||||  |||||||||| ||||||||||| |||||||||||    
T  27502207 caagaattgttgaaccaagctgaggaacaatttgaatatgatcatccaatgggtggtctaactattccttgcagagaagacattttcttagatat 27502113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 17 - 206
Target Start/End: Original strand, 27466779 - 27466968
Alignment:
Q  17 catcatcttcaaaaggtgtcgaggttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaacca 116  Q
    ||||||||||||||  ||| |  ||||||||||||||||||||||| || || ||| |||| |||||  | ||||||||||| |||||||| || || ||    
T  27466779 catcatcttcaaaatctgtgggcgttccaaagggatatctagcagtgtacgtaggaaaggagatgaagagatttgtgatccctatatcatatttgaagca 27466878  T
Q  117 accattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaaga 206  Q
    |  ||| || |||||  || ||| ||||   ||||||||||||||||| |||||||||| |||||||||| |||||||||| ||||||||    
T  27466879 aaaattattccaagaactgctgagccaaagtgaggaacaatttgaatatgatcatccaatgggtggtctcactattccttgcagagaaga 27466968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 40 - 197
Target Start/End: Original strand, 27506679 - 27506836
Alignment:
Q  40 gttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttga 139  Q
    ||||||||||| ||| | ||||||||||| |||||| ||  ||  ||||||||||||||||||||||||||||||||||||||||||||||| ||| |      
T  27506679 gttccaaagggctatgttgcagtatatgtcggagagaaacagacgcggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagaattgctac 27506778  T
Q  140 accaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttg 197  Q
    | ||||| || ||| |||||| ||| |||||||| | |||||| ||| | ||||||||    
T  27506779 atcaagcggaagaagaatttggatatgatcatcccatgggtggactcaccattccttg 27506836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 218
Target Start/End: Original strand, 27473850 - 27474051
Alignment:
Q  17 catcatcttcaaaaggtgtcgaggttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaacca 116  Q
    ||||||||||||||  ||| |  |||||||||||||||||||| || || || |||||||| |||||  | ||||||||||| |||||||| || || ||    
T  27473850 catcatcttcaaaatctgtgggtgttccaaagggatatctagctgtgtacgtaggagaggagatgaagagatttgtgatccctatatcatatttgaagca 27473949  T
Q  117 accattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaagacatgttctta 216  Q
    |  ||  || ||||| ||| ||| ||||   ||||||||||||||||| |||||||||| |||||||||| | ||||||||  |||||||| | ||||||    
T  27473950 aaaatcattccaagaattgctgagccaaagtgaggaacaatttgaatatgatcatccaatgggtggtctcaccattccttgcggagaagacgttttctta 27474049  T
Q  217 ga 218  Q
    ||    
T  27474050 ga 27474051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 81 - 197
Target Start/End: Original strand, 27412686 - 27412802
Alignment:
Q  81 gaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggt 180  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||  ||||| || ||| | |||| ||| |||||||||| ||||    
T  27412686 gaaacggtttgtgatcccaatatcatacttgaaccaaccattatttcaagacttattgagtcaagctgaagaagagtttggatatgatcatccaatgggt 27412785  T
Q  181 ggtctcgctattccttg 197  Q
    || ||| | ||||||||    
T  27412786 ggcctcaccattccttg 27412802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 218
Target Start/End: Complemental strand, 27500520 - 27500319
Alignment:
Q  17 catcatcttcaaaaggtgtcgaggttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaacca 116  Q
    ||||||||||||||  ||| || || ||||| |||||||||||||| || || |||||| ||||||| || ||||||||||| |||||||||||||||||    
T  27500520 catcatcttcaaaatctgtggacgtaccaaaaggatatctagcagtgtacgtaggagagaaaatgaagcgatttgtgatccctatatcatacttaaacca 27500421  T
Q  117 accattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaagacatgttctta 216  Q
    |   |  || ||||| ||| ||| |||| | || ||||| || | ||| || ||||||| ||||||  || |||||||||| ||||||||| | ||||||    
T  27500420 aagttcattccaagaattgctgagccaatctgaagaacagttcggatatgaccatccaatgggtggcatcactattccttgcagagaagaccttttctta 27500321  T
Q  217 ga 218  Q
    ||    
T  27500320 ga 27500319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 27425771 - 27425950
Alignment:
Q  18 atcatcttcaaaaggtgtcgaggttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaa 117  Q
    |||| |||| |||| ||| || || |||||||||||||| ||||||||||| |||||| ||   || |||| ||||||||||||||||||||| ||||||    
T  27425771 atcagcttcgaaagctgtggacgtgccaaagggatatcttgcagtatatgttggagagaaacaaaagcggtatgtgatcccaatatcatacttgaaccaa 27425870  T
Q  118 ccattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttg 197  Q
    ||||  ||||||||||| ||||  |||   |||||| | |||| ||| |||||||| | |||||| ||| | ||||||||    
T  27425871 ccatcatttcaagacttattgagtcaatttgaggaagagtttggatatgatcatcccatgggtggcctcaccattccttg 27425950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 27566126 - 27565952
Alignment:
Q  24 ttcaaaaggtgtcgaggttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattg 123  Q
    |||||||| ||| || || |||||||||||||| ||||| ||||| |||||| ||   || || ||||||||||| ||||||||| | ||||||||||||    
T  27566126 ttcaaaagttgtggacgtgccaaagggatatcttgcagtgtatgttggagagaaacaaaagcgatttgtgatccccatatcatacctgaaccaaccattg 27566027  T
Q  124 tttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgt 198  Q
    |||||||||||| |||  ||||  |||||| |   || ||| |||||||||| |||||| ||| | |||||||||    
T  27566026 tttcaagacttgctgatacaagttgaggaagagcatggatatgatcatccaatgggtggcctcaccattccttgt 27565952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 40 - 197
Target Start/End: Complemental strand, 27479042 - 27478885
Alignment:
Q  40 gttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttga 139  Q
    ||||||||||| ||| | ||||| ||||| |||||| ||  ||| ||||||||  |||||||||||||||| |||||||||||||||||||| ||| |      
T  27479042 gttccaaagggctatgttgcagtgtatgttggagagaaacagaagcggtttgttgtcccaatatcatacttgaaccaaccattgtttcaagaattgctac 27478943  T
Q  140 accaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttg 197  Q
    | ||||| || ||| |||||| ||| |||||||| | |||||| ||| | ||||||||    
T  27478942 atcaagcggaagaagaatttggatatgatcatcccatgggtggcctcaccattccttg 27478885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 40 - 197
Target Start/End: Complemental strand, 27486102 - 27485945
Alignment:
Q  40 gttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttga 139  Q
    ||||||||||| ||| | ||||| ||||| |||||| ||  ||| ||||||||  |||||||||||||||| |||||||||||||||||||| ||| |      
T  27486102 gttccaaagggctatgttgcagtgtatgttggagagaaacagaagcggtttgttgtcccaatatcatacttgaaccaaccattgtttcaagaattgctac 27486003  T
Q  140 accaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttg 197  Q
    | ||||| || ||| |||||| ||| |||||||| | |||||| ||| | ||||||||    
T  27486002 atcaagcggaagaagaatttggatatgatcatcccatgggtggcctcaccattccttg 27485945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 40 - 197
Target Start/End: Complemental strand, 27497481 - 27497324
Alignment:
Q  40 gttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttga 139  Q
    ||||||||||| ||| | ||||| ||||| |||||  ||   || |||||||||||||| || ||||||||||||||||||||||||||| | |||||||    
T  27497481 gttccaaagggctatgttgcagtgtatgttggagataaacaaaagcggtttgtgatccctatctcatacttaaaccaaccattgtttcaatatttgttga 27497382  T
Q  140 accaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttg 197  Q
      ||||| |||||| | |||| ||| |||||||| || ||||| ||| | ||||||||    
T  27497381 gtcaagctgaggaagagtttggatatgatcatcccacaggtggcctcaccattccttg 27497324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 27502989 - 27502808
Alignment:
Q  17 catcatcttcaaaaggtgtcgaggttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaacca 116  Q
    ||||||||||||||||  | || || ||||| |||||||| || || ||||| |||||| | ||||| ||||||||||| ||||| ||||| || || ||    
T  27502989 catcatcttcaaaaggcttggatgtgccaaaaggatatcttgccgtttatgtaggagagaagatgaagcggtttgtgattccaatgtcatatttgaatca 27502890  T
Q  117 accattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgt 198  Q
    | | |  |||||||||||| ||| |||||| | |||| |||||| ||| || ||||||| |||||||||  |||||||||||    
T  27502889 aacttcatttcaagacttgctgagccaagctgtggaagaatttggatatgaccatccaatgggtggtcttactattccttgt 27502808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 206
Target Start/End: Original strand, 27415589 - 27415768
Alignment:
Q  24 ttcaaaaggtgtcgaggttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattg 123  Q
    |||||||| ||| || || |||||||||||||| ||||| ||||| ||| |  ||| |   || ||||||||||| ||||||||||| |||||||||| |    
T  27415589 ttcaaaagttgtggatgtgccaaagggatatcttgcagtgtatgttggaaaacaaaag---cgatttgtgatccccatatcatacttgaaccaaccatcg 27415685  T
Q  124 tttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaaga 206  Q
    ||||||||||||||||  ||||| |||||| | |||| ||| |||||| | | |||||| ||| | |||||||| | ||||||    
T  27415686 tttcaagacttgttgagtcaagctgaggaagagtttggatatgatcattccatgggtggcctcaccattccttgcacagaaga 27415768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 70 - 221
Target Start/End: Original strand, 27460489 - 27460640
Alignment:
Q  70 ggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatc 169  Q
    |||||||| |||||  | ||||||||||| |||||||| || || |||  ||  || ||||| ||| ||| ||||   ||||||||||||||||| ||||    
T  27460489 ggagaggacatgaagagatttgtgatccctatatcatatttgaagcaaaaatcattccaagaattgctgagccaaagtgaggaacaatttgaatatgatc 27460588  T
Q  170 atccaacgggtggtctcgctattccttgtagagaagacatgttcttagatat 221  Q
    |||||| |||||||||| | |||||||| ||||||||||| ||||| |||||    
T  27460589 atccaatgggtggtctcaccattccttgcagagaagacattttcttggatat 27460640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 27570230 - 27570051
Alignment:
Q  18 atcatcttcaaaaggtgtcgaggttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaa 117  Q
    |||| ||||||||| ||| || || |||||||||||||| ||||||||||| |||||| ||  ||  |||| |||||||||  |||||||||||| ||||    
T  27570230 atcagcttcaaaagctgtggatgtgccaaagggatatcttgcagtatatgttggagagaaacagacgcggtatgtgatccccgtatcatacttaagccaa 27570131  T
Q  118 ccattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttg 197  Q
    || |  |||||||||||| |||  ||||| |||||| | || | ||| |||||||| | |||||| ||| | ||||||||    
T  27570130 ccttcatttcaagacttgctgagtcaagctgaggaagagttcggatatgatcatcccatgggtggcctcaccattccttg 27570051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 206
Target Start/End: Complemental strand, 27422091 - 27421924
Alignment:
Q  43 ccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaacc 142  Q
    ||||| || ||||| ||||| ||||| |||||   |||||||||||| ||||| ||| |||||||||| ||||||||||| |||||||| ||  | || |    
T  27422091 ccaaaaggctatctcgcagtctatgttggagatagaatgaaacggttcgtgattccagtatcatacttgaaccaaccattatttcaagaattactaaatc 27421992  T
Q  143 aagccgaggaacaatt----tgaatacgatcatccaacgggtggtctcgctattccttgtagagaaga 206  Q
    |||| || ||| ||||    || ||||||||||||||||||||||||| | |||||||| || |||||    
T  27421991 aagcagaagaagaatttggatggatacgatcatccaacgggtggtctcacaattccttgcagtgaaga 27421924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 27527145 - 27527275
Alignment:
Q  43 ccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaacc 142  Q
    |||||||| ||||| || || ||||| |||||  ||  ||||||||||||||||||||||||| ||||||||||||||| ||||| ||| ||| |||  |    
T  27527145 ccaaagggctatcttgcggtgtatgttggagataaacagaaacggtttgtgatcccaatatcacacttaaaccaaccatcgtttctagagttgctgagtc 27527244  T
Q  143 aagccgaggaacaatttgaatacgatcatcc 173  Q
    |||| |||||| | |||| ||| ||||||||    
T  27527245 aagctgaggaagagtttggatatgatcatcc 27527275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 27585717 - 27585835
Alignment:
Q  88 tttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcg 187  Q
    |||||||||||  |||||||||| |||||||||||||||||||| ||| |||  |||||||| ||| | |||| ||| |||||||||| ||| ||||||     
T  27585717 tttgtgatccccgtatcatacttgaaccaaccattgtttcaagatttgatgagtcaagccgaagaagagtttggatatgatcatccaatgggaggtctca 27585816  T
Q  188 ctattccttgtagagaaga 206  Q
    | |||||||| | ||||||    
T  27585817 ccattccttgcacagaaga 27585835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 206
Target Start/End: Original strand, 17970283 - 17970446
Alignment:
Q  43 ccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaacc 142  Q
    |||||||||||||| || || || || |||||||||||||| |||||||||||||| |  |||||||| |||||| | |  |||||| ||||| |||  |    
T  17970283 ccaaagggatatcttgcggtgtacgttggagaggaaatgaagcggtttgtgatccctacgtcatacttgaaccaaacttcatttcaatacttgctgagtc 17970382  T
Q  143 aagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaaga 206  Q
      || |||||| |||| | |||||||||||||| |||||| ||| | |||||||| | ||||||    
T  17970383 gggcagaggaagaattcggatacgatcatccaatgggtggcctcacaattccttgcacagaaga 17970446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 195
Target Start/End: Original strand, 27489983 - 27490096
Alignment:
Q  82 aaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtg 181  Q
    |||||||||||  ||||  | |||||||||||| ||||||  |||||||| |||||||| |||||||||||| | |||| ||| |||||||||| |||||    
T  27489983 aaacggtttgtagtccctgtgtcatacttaaacaaaccatcatttcaagatttgttgaatcaagccgaggaagagtttggatatgatcatccaatgggtg 27490082  T
Q  182 gtctcgctattcct 195  Q
    | ||| | ||||||    
T  27490083 gcctcaccattcct 27490096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 27468425 - 27468329
Alignment:
Q  101 tatcatacttaaaccaaccattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttg 197  Q
    ||||||||||||||||||| |  ||||||||||||||||  ||| |||||||| |||||| ||| |||||||| | |||||| ||| | ||||||||    
T  27468425 tatcatacttaaaccaaccttcatttcaagacttgttgagtcaatccgaggaagaatttggatatgatcatcccatgggtggcctcaccattccttg 27468329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 27503964 - 27504060
Alignment:
Q  101 tatcatacttaaaccaaccattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttg 197  Q
    |||||||||| |||||||| |  ||||||||||||||||  |||||||||||| | |||| ||| |||||||||| |||||| ||| | ||||||||    
T  27503964 tatcatacttgaaccaaccttcatttcaagacttgttgagtcaagccgaggaagagtttggatatgatcatccaatgggtggcctcaccattccttg 27504060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 27563456 - 27563348
Alignment:
Q  89 ttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgc 188  Q
    ||||||||||  |||||||||| |||||| ||||||||||||| ||| |||  |||||||| ||| | |||| ||| |||||||||| |||||| ||| |    
T  27563456 ttgtgatccccgtatcatacttgaaccaaacattgtttcaagatttgctgagtcaagccgaagaagagtttggatatgatcatccaatgggtggcctcac 27563357  T
Q  189 tattccttg 197  Q
     ||||||||    
T  27563356 aattccttg 27563348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 27514933 - 27515038
Alignment:
Q  101 tatcatacttaaaccaaccattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtag 200  Q
    |||||||||| || ||||| |  ||||||||||||||||  ||| |||||||| |||||| ||| |||||||| | |||||| ||| | ||||||||||     
T  27514933 tatcatacttgaatcaaccttcatttcaagacttgttgagtcaatccgaggaagaatttggatatgatcatcccatgggtggcctcaccattccttgtac 27515032  T
Q  201 agaaga 206  Q
    ||||||    
T  27515033 agaaga 27515038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 185
Target Start/End: Complemental strand, 27424670 - 27424528
Alignment:
Q  43 ccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaacc 142  Q
    ||||| || ||||| ||||| ||||| |||||  ||||||  ||||||||||| ||| |||||||||| |||||||| |  |||||||| ||| | || |    
T  27424670 ccaaaaggctatctcgcagtctatgttggagatcaaatgaggcggtttgtgattccagtatcatacttgaaccaaccttcatttcaagaattgctaaatc 27424571  T
Q  143 aagccgaggaacaatttgaatacgatcatccaacgggtggtct 185  Q
    || | || ||| ||| || ||| |||||||||| |||||||||    
T  27424570 aatctgaagaagaatatggatatgatcatccaatgggtggtct 27424528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 27524566 - 27524647
Alignment:
Q  101 tatcatacttaaaccaaccattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtgg 182  Q
    ||||||| || |||||||| |  ||||||||||||||||| ||||| |||||| | |||| ||| |||||||||| ||||||    
T  27524566 tatcatatttgaaccaaccttcatttcaagacttgttgaatcaagctgaggaagagtttggatatgatcatccaatgggtgg 27524647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 27475677 - 27475581
Alignment:
Q  101 tatcatacttaaaccaaccattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttg 197  Q
    |||||||||| || ||||| |  ||||||||||||||||  |||||||||||| | |||| ||| |||||||| | |||||| ||| | ||||||||    
T  27475677 tatcatacttgaatcaaccttcatttcaagacttgttgagtcaagccgaggaagagtttggatatgatcatcccatgggtggcctcaccattccttg 27475581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 182
Target Start/End: Original strand, 27423206 - 27423345
Alignment:
Q  43 ccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaacc 142  Q
    |||||| ||||||| || |||||||| ||| || ||  || ||||  ||||||||  ||||||||||| |||||||| |  |||||||| |||||||  |    
T  27423206 ccaaagagatatcttgctgtatatgttggatagaaacagacacggcatgtgatccgcatatcatacttgaaccaaccttcatttcaagaattgttgagtc 27423305  T
Q  143 aagccgaggaacaatttgaatacgatcatccaacgggtgg 182  Q
    ||||||||||| | ||||  ||| ||||||| | ||||||    
T  27423306 aagccgaggaagagtttggttacaatcatcccatgggtgg 27423345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 182
Target Start/End: Original strand, 27508896 - 27508975
Alignment:
Q  103 tcatacttaaaccaaccattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtgg 182  Q
    ||||| || |||||||| |  ||||||||||||||||| || || |||||| | |||| ||| |||||||||||||||||    
T  27508896 tcatatttgaaccaaccttcatttcaagacttgttgaatcaggctgaggaagagtttggatatgatcatccaacgggtgg 27508975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 185
Target Start/End: Complemental strand, 27414460 - 27414318
Alignment:
Q  43 ccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaacc 142  Q
    ||||| || ||||| ||||| || || |||||  |||||| |||||||||||| ||  |||||||||| |||||||| |  |||||||| ||  | || |    
T  27414460 ccaaaaggctatcttgcagtctacgttggagataaaatgagacggtttgtgattcctgtatcatacttgaaccaaccctcatttcaagaattactaaatc 27414361  T
Q  143 aagccgaggaacaatttgaatacgatcatccaacgggtggtct 185  Q
    || | || ||| |||||| ||| |||||||||| |||||||||    
T  27414360 aatcagaagaagaatttggatatgatcatccaatgggtggtct 27414318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 221
Target Start/End: Complemental strand, 1754426 - 1754220
Alignment:
Q  14 ggacatcatcttcaaaaggtgtcgaggttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaa 113  Q
    ||||||||||  ||||||| || || |  ||||| ||||||||||| |||||||| ||||| |||||||| ||||||||||||||  |||||||||| ||    
T  1754426 ggacatcatccccaaaaggcgtggacgagccaaaaggatatctagctgtatatgttggagaagaaatgaagcggtttgtgatccccgtatcatacttgaa 1754327  T
Q  114 ccaaccattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaagacatgttc 213  Q
    |||| | |  |||||| | ||| | ||| || | |||||||| |||||||| |||||||| | |||||||||| ||||||||||||||||| || | |||    
T  1754326 ccaatcgtcatttcaaaaattgctaaacaaatctgaggaacagtttgaatatgatcatccgatgggtggtctcactattccttgtagagaa-accttttc 1754228  T
Q  214 ttagatat 221  Q
    ||||||||    
T  1754227 ttagatat 1754220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 197
Target Start/End: Complemental strand, 1756913 - 1756759
Alignment:
Q  43 ccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaacc 142  Q
    |||||||| ||||| |||||  |||| |||||| ||  ||| |||||||||||||||||||||||||| |||||||||| ||||||| |||||||||  |    
T  1756913 ccaaagggctatcttgcagtgaatgttggagagaaacagaagcggtttgtgatcccaatatcatacttgaaccaaccatcgtttcaatacttgttgagtc 1756814  T
Q  143 aagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttg 197  Q
    |||| || ||| |||||| ||| ||||| || | |||||| ||| | ||||||||    
T  1756813 aagctgaagaagaatttggatatgatcaccccatgggtggcctcaccattccttg 1756759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 70 - 221
Target Start/End: Original strand, 1759259 - 1759414
Alignment:
Q  70 ggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaaccaagcc----gaggaacaatttgaatac 165  Q
    |||||| ||||||| ||||||||||| ||  ||||||| ||||||||| |||  || ||||| ||||||| ||||||     ||||||||||||||||||    
T  1759259 ggagagaaaatgaagcggtttgtgattcctgtatcatatttaaaccaaacatcattccaagaattgttgagccaagcaagctgaggaacaatttgaatac 1759358  T
Q  166 gatcatccaacgggtggtctcgctattccttgtagagaagacatgttcttagatat 221  Q
     | ||||||| |||||||||| | |||| ||| ||||||||  | |||||||||||    
T  1759359 aaccatccaatgggtggtctcaccattctttgcagagaagaagttttcttagatat 1759414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 182
Target Start/End: Original strand, 1754669 - 1754811
Alignment:
Q  40 gttccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttga 139  Q
    ||||||||||| ||| | ||||| ||| | |||||| ||  |||||||  ||||||||||||||||||||| || ||||||| |||||||  ||||||||    
T  1754669 gttccaaagggctatgttgcagtgtatattggagagaaacagaaacggcatgtgatcccaatatcatacttgaatcaaccatcgtttcaatccttgttga 1754768  T
Q  140 accaagccgaggaacaatttgaatacgatcatccaacgggtgg 182  Q
      ||||| | |||| | |||| ||| |||||||||| ||||||    
T  1754769 gtcaagctgcggaagagtttggatatgatcatccaatgggtgg 1754811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 6e-24; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 58 - 206
Target Start/End: Original strand, 55084785 - 55084933
Alignment:
Q  58 gcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaaccaagccgaggaacaat 157  Q
    ||||| ||||| |||||| ||||||| |||||||||||||| || || ||||| ||||||||||  ||||||||||||||||  |  || |||||| |||    
T  55084785 gcagtgtatgttggagagaaaatgaagcggtttgtgatccctatgtcttacttgaaccaaccatcatttcaagacttgttgagtcgggcggaggaagaat 55084884  T
Q  158 ttgaatacgatcatccaacgggtggtctcgctattccttgtagagaaga 206  Q
    ||| |||||||||||||| |||||| ||| | |||||||| | ||||||    
T  55084885 ttggatacgatcatccaatgggtggcctcacaattccttgcacagaaga 55084933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 209
Target Start/End: Complemental strand, 38025031 - 38024865
Alignment:
Q  43 ccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaacc 142  Q
    |||||||| ||||| ||||||||||| |||||| ||||||| |||||||| ||||| || |||||||| |||||| | |  |||||| |||| ||||  |    
T  38025031 ccaaagggctatcttgcagtatatgttggagagcaaatgaagcggtttgttatccccatgtcatacttgaaccaagcttcctttcaaaacttattgagtc 38024932  T
Q  143 aagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaagacat 209  Q
    |||| |||||| |||||| ||| ||||| |||| |||||| ||| | |||||||| | |||||||||    
T  38024931 aagcagaggaagaatttggatatgatcacccaatgggtggcctcacgattccttgcacagaagacat 38024865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 209
Target Start/End: Complemental strand, 38031483 - 38031317
Alignment:
Q  43 ccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaacc 142  Q
    |||||||| ||||| ||||||||||| |||||| ||||||| |||||||| ||||| || |||||||| |||||| | |  |||||| |||| ||||  |    
T  38031483 ccaaagggctatcttgcagtatatgttggagagcaaatgaagcggtttgttatccccatgtcatacttgaaccaagcttcctttcaaaacttattgagtc 38031384  T
Q  143 aagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaagacat 209  Q
    |||| |||||| |||||| ||| ||||| |||| |||||| ||| | |||||||| | |||||||||    
T  38031383 aagcagaggaagaatttggatatgatcacccaatgggtggcctcacgattccttgcacagaagacat 38031317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 70 - 197
Target Start/End: Original strand, 38043914 - 38044041
Alignment:
Q  70 ggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaaccaagccgaggaacaatttgaatacgatc 169  Q
    |||||||||||||| |||||||||||||| || |||||||| || ||| | | ||||||||||||| |||  ||||| |||||| |||||| ||| ||||    
T  38043914 ggagaggaaatgaagcggtttgtgatccctatgtcatacttgaatcaaacttcgtttcaagacttgctgagtcaagcagaggaagaatttggatatgatc 38044013  T
Q  170 atccaacgggtggtctcgctattccttg 197  Q
    |||||| ||| || ||| | ||||||||    
T  38044014 atccaatgggcggcctcacaattccttg 38044041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 206
Target Start/End: Complemental strand, 50904948 - 50904785
Alignment:
Q  43 ccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaacc 142  Q
    |||||||||||||| ||||| || || ||||| |||||||| |||||||||||||  || || ||||| |||||| | |  ||||||||||||||||  |    
T  50904948 ccaaagggatatcttgcagtgtacgttggagaagaaatgaagcggtttgtgatccatatgtcctacttgaaccaaacttcatttcaagacttgttgagtc 50904849  T
Q  143 aagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaaga 206  Q
     ||| |||||  |||| | ||| |||||||||| |||||| ||| | |||||||| ||||||||    
T  50904848 gagcagaggatgaattcggatatgatcatccaatgggtggcctcaccattccttgcagagaaga 50904785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 182
Target Start/End: Complemental strand, 50912025 - 50911886
Alignment:
Q  43 ccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaacc 142  Q
    |||||||| ||||| || |||||||| |||||  | |||||||||||||||||||| |  |||||||| |||||| | |  |||||| |||||||||  |    
T  50912025 ccaaagggctatcttgcggtatatgttggagacaagatgaaacggtttgtgatccccaagtcatacttgaaccaagcttcatttcaaaacttgttgagtc 50911926  T
Q  143 aagccgaggaacaatttgaatacgatcatccaacgggtgg 182  Q
    |||| |||||| |||||| ||| ||||| |||| ||||||    
T  50911925 aagcagaggaagaatttggatatgatcacccaatgggtgg 50911886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 207
Target Start/End: Complemental strand, 38028922 - 38028758
Alignment:
Q  43 ccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaacc 142  Q
    |||||||| ||||| ||||| || || |||||| ||||||| || ||||| ||||| |  |||||||| |||||| | |  |||||| || ||||||  |    
T  38028922 ccaaagggctatcttgcagtgtacgttggagagcaaatgaagcgatttgttatccccacgtcatacttgaaccaagcttcatttcaaaacctgttgagtc 38028823  T
Q  143 aagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaagac 207  Q
    ||||||||||| |||||| ||| || ||||||| ||| || ||| | |||||||| | |||||||    
T  38028822 aagccgaggaagaatttggatatgaccatccaatgggcggcctcacaattccttgcacagaagac 38028758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 175
Target Start/End: Complemental strand, 38033935 - 38033803
Alignment:
Q  43 ccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaacc 142  Q
    |||||||| ||||| ||||| ||  | |||||| ||||||| |||||||| ||||| |  |||||||| |||||| | |  |||||| |||||||||  |    
T  38033935 ccaaagggctatcttgcagtgtacattggagagcaaatgaagcggtttgttatccccacgtcatacttgaaccaagcttcatttcaaaacttgttgagtc 38033836  T
Q  143 aagccgaggaacaatttgaatacgatcatccaa 175  Q
    ||||||||||| |||||| ||| || |||||||    
T  38033835 aagccgaggaagaatttggatatgaccatccaa 38033803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 197
Target Start/End: Complemental strand, 38036949 - 38036795
Alignment:
Q  43 ccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaacc 142  Q
    |||||||| ||||| ||||| || || |||||| ||||||||||||||||  |||| ||  ||||||| |||||| | |  |||||| | |||||||  |    
T  38036949 ccaaagggctatcttgcagtgtacgttggagagcaaatgaaacggtttgttgtccccatgccatacttgaaccaagcttcatttcaaaatttgttgagtc 38036850  T
Q  143 aagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttg 197  Q
    ||||||||||| |||| | ||| || ||||||| ||| || ||| | ||||||||    
T  38036849 aagccgaggaagaattcggatatgaccatccaatgggcggcctcacaattccttg 38036795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 207
Target Start/End: Complemental strand, 38040237 - 38040073
Alignment:
Q  43 ccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaacc 142  Q
    |||||||| ||||| ||||| || || |||||| ||||||| || ||||| ||||| |  |||||||| |||||| | |  |||||| || ||||||  |    
T  38040237 ccaaagggctatcttgcagtgtacgttggagagcaaatgaagcgatttgttatccccacgtcatacttgaaccaagcttcatttcaaaacctgttgagtc 38040138  T
Q  143 aagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaagac 207  Q
    ||||||||||| |||| | ||| || ||||||| ||| || ||| | |||||||| | |||||||    
T  38040137 aagccgaggaagaattcggatatgaccatccaatgggcggcctcacaattccttgcacagaagac 38040073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 206
Target Start/End: Complemental strand, 48840867 - 48840705
Alignment:
Q  43 ccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaacc 142  Q
    |||||||||||||| ||| | || || |||||||| ||||| || ||||| ||||| ||  ||||||| |||||| | |  ||||||||||||||| |      
T  48840867 ccaaagggatatcttgcattgtacgtcggagaggagatgaagcgatttgtaatccccatgccatacttgaaccaagcctcatttcaagacttgttg-agt 48840769  T
Q  143 aagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaaga 206  Q
    |||  ||| || |||||| ||| |||||||||| |||||| ||| | |||||||| | ||||||    
T  48840768 aagtggagaaagaatttggatatgatcatccaatgggtggcctcacaattccttgcacagaaga 48840705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 182
Target Start/End: Complemental strand, 21607452 - 21607313
Alignment:
Q  43 ccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaacc 142  Q
    |||||||||||||| || |||||||| |||||| ||||||| |||||||| ||||| || |||||||| |||| | | |  |||||| |||| ||||  |    
T  21607452 ccaaagggatatcttgcggtatatgttggagagcaaatgaagcggtttgttatccccatgtcatacttgaaccgagcttcctttcaaaacttattgagtc 21607353  T
Q  143 aagccgaggaacaatttgaatacgatcatccaacgggtgg 182  Q
    |||| |||||| |||||| ||| ||||| |||| ||||||    
T  21607352 aagcagaggaagaatttggatatgatcacccaatgggtgg 21607313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 206
Target Start/End: Original strand, 3073553 - 3073716
Alignment:
Q  43 ccaaagggatatctagcagtatatgtgggagaggaaatgaaacggtttgtgatcccaatatcatacttaaaccaaccattgtttcaagacttgttgaacc 142  Q
    |||||||||||||| || || || || |||||||||||||| |||||||||||||| |  |||||||| |||||| | |  |||||| ||||| |||  |    
T  3073553 ccaaagggatatcttgcggtgtacgttggagaggaaatgaagcggtttgtgatccctacgtcatacttgaaccaaacttcatttcaatacttgctgagtc 3073652  T
Q  143 aagccgaggaacaatttgaatacgatcatccaacgggtggtctcgctattccttgtagagaaga 206  Q
      || |||||| |||| | |||||||||||||| |||||| ||| | |||||||| | ||||||    
T  3073653 gggcagaggaagaattcggatacgatcatccaatgggtggcctcacaattccttgcacagaaga 3073716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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