View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15163_high_132 (Length: 225)
Name: NF15163_high_132
Description: NF15163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15163_high_132 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 39292097 - 39292209
Alignment:
| Q |
5 |
catcatatacctgttttacaacatcaatcgtgtatgtcatta----attaattaatacatctttatgtgtaaactttcaagatttgagtaattgagattc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
39292097 |
catcatatacctgttttacaacatcaatcgtgtatgtcattaattaattaattaatacatctttatgtgtaaactttgaagatatgagtaattgagattc |
39292196 |
T |
|
| Q |
101 |
atttaaaacatta |
113 |
Q |
| |
|
||||||||||||| |
|
|
| T |
39292197 |
atttaaaacatta |
39292209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University