View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15163_high_133 (Length: 224)
Name: NF15163_high_133
Description: NF15163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15163_high_133 |
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Alignment Details
Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 14757332 - 14757410
Alignment:
| Q |
131 |
gatgaagataaattatttgtttgagacaagtggaagcataaaagaaaaatacaaagataagaaaatatttcatctatct |
209 |
Q |
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| T |
14757332 |
gatgaagataaattatttgtttgagacaagtggaagcataaaagaaaaagacaaagataagaaaatatttcatctatct |
14757410 |
T |
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Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14757039 - 14757092
Alignment:
| Q |
1 |
ccattttctaacatgattgaatcaaaccaatcaatcaatcatggtcaaatgatc |
54 |
Q |
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| T |
14757039 |
ccattttctaacatgattgaatcaaaccaatcaatcaatcatggtcaaatgatc |
14757092 |
T |
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