View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15163_high_24 (Length: 479)
Name: NF15163_high_24
Description: NF15163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15163_high_24 |
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Alignment Details
Target: chr7 (Bit Score: 388; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 388; E-Value: 0
Query Start/End: Original strand, 10 - 441
Target Start/End: Complemental strand, 33817571 - 33817140
Alignment:
| Q |
10 |
aagaatatgcgatatctttttccggattaacactcttccaaaccttagaaatgatttggagttgatccatcgagaaaggtagatttgccgagaaagtcca |
109 |
Q |
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| T |
33817571 |
aagaaaatgcgataactttttccggattaacactcttccaaaccttagaaatgatttggagttgatccatcgagaaagatagatttgccgagagagtcca |
33817472 |
T |
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| Q |
110 |
ataagtcaagttattcgagtaaataccactagtattatgaacccaacgatcatcaatcaaggttaacaaaactccaactataaggcacaaaatattcgaa |
209 |
Q |
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| T |
33817471 |
ataagtcaagttattcgagtaaataccactagtattatgaacccaacgatcatcaatcaaggttaacaaaactccaactataaggcacaaaatattcgaa |
33817372 |
T |
|
| Q |
210 |
acaaactggtgttctcatacaaatagtggcatcctctaggtaaggttcgaaactcaaacattctgaatctaatggctcagactccccaacaacgagtctt |
309 |
Q |
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| T |
33817371 |
acaaactggtgttcccatacaaatagcggtatcctctaggtaaggttcgaaactcgaacatcctgaatctaatggctcagactccccaacaacgagtctt |
33817272 |
T |
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| Q |
310 |
tctggtgagataccaaataggagatcatcactagcctagaaatcatgtcacaagacgtcgacatgccattaccaataaaagtgggttctcatttagtgta |
409 |
Q |
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| T |
33817271 |
tctggtgagataccaaataggagaccatcactagcctagaaatcatgtcacaagacgtcgacatgccattaccaataaaagtgggttctcattcagtgta |
33817172 |
T |
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| Q |
410 |
ttaaaacttggatccatctatagtatacatat |
441 |
Q |
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| T |
33817171 |
ttaaaacttggatccatctatagtatacatat |
33817140 |
T |
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