View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15163_high_54 (Length: 351)
Name: NF15163_high_54
Description: NF15163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15163_high_54 |
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Alignment Details
Target: chr5 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 17 - 341
Target Start/End: Original strand, 6072808 - 6073132
Alignment:
| Q |
17 |
aaatttttatgcatcaaaatattttaatttgacaaagtaatgataaaggnnnnnnnnnnnnntggaaagtatgaggaaaatctacagtgaatctaaagtt |
116 |
Q |
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| T |
6072808 |
aaatttttatgcatcaaaatattttaatttgacaaagtaatgataaaggaaaaaagaaaaaatggaaagtatgaggaaaatctacagtgaatctaaagtt |
6072907 |
T |
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| Q |
117 |
gagacattaaaagaatatgggaccattaatttgtgcagttggtatataagattagatgtctcagcatatttactgtgtatcaggaaagctcattcattag |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
6072908 |
gagacattaaaagaatatgggaccattaatttgtgcagttggtatataagattagatgtctcagcatatttactatgtatcaggaaagctcattcattag |
6073007 |
T |
|
| Q |
217 |
tgttttgttttcgtacatcctaagttaggaaacaggaccacaaattaatttgtagagtctccttaattaagaatgcaatacctacatatggaattatggc |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6073008 |
tgttttgttttcgtacatcctaagttaggaaacaggaccacaaattaatttgtagagtctccttaattaagaatgcaatacctacatatggaattatggc |
6073107 |
T |
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| Q |
317 |
ttcagccttcaagacccaccctatg |
341 |
Q |
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||||||||||||||||||||||||| |
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| T |
6073108 |
ttcagccttcaagacccaccctatg |
6073132 |
T |
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