View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15163_high_6 (Length: 732)

Name: NF15163_high_6
Description: NF15163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15163_high_6
NF15163_high_6
[»] chr3 (25 HSPs)
chr3 (14-98)||(19659142-19659226)
chr3 (14-92)||(5348138-5348216)
chr3 (14-96)||(19631290-19631372)
chr3 (24-81)||(4657452-4657509)
chr3 (14-91)||(11832277-11832354)
chr3 (14-91)||(12252084-12252161)
chr3 (31-92)||(15044580-15044641)
chr3 (14-98)||(25660880-25660965)
chr3 (14-98)||(25667285-25667370)
chr3 (14-98)||(25673690-25673775)
chr3 (14-96)||(11829214-11829296)
chr3 (14-98)||(25680115-25680200)
chr3 (14-98)||(25688419-25688504)
chr3 (14-91)||(30104254-30104331)
chr3 (48-96)||(16218278-16218326)
chr3 (14-96)||(10935225-10935307)
chr3 (14-71)||(7770018-7770075)
chr3 (52-93)||(15540756-15540797)
chr3 (18-98)||(4161586-4161665)
chr3 (55-99)||(13440903-13440947)
chr3 (17-92)||(12695502-12695576)
chr3 (24-79)||(20421653-20421708)
chr3 (16-98)||(17394186-17394268)
chr3 (14-79)||(6224458-6224522)
chr3 (31-96)||(19431739-19431803)
[»] chr1 (9 HSPs)
chr1 (14-98)||(23475180-23475264)
chr1 (11-96)||(20408742-20408827)
chr1 (14-94)||(21721000-21721080)
chr1 (14-92)||(18621226-18621302)
chr1 (31-91)||(21424042-21424102)
chr1 (22-98)||(22615874-22615950)
chr1 (6-81)||(21981554-21981629)
chr1 (28-96)||(21403160-21403228)
chr1 (18-95)||(21682417-21682495)
[»] chr8 (13 HSPs)
chr8 (14-93)||(18829983-18830062)
chr8 (5-80)||(25281802-25281877)
chr8 (14-96)||(23539657-23539739)
chr8 (21-96)||(23543193-23543268)
chr8 (14-99)||(24625620-24625705)
chr8 (14-92)||(16090627-16090705)
chr8 (18-94)||(14392971-14393046)
chr8 (15-96)||(20496153-20496234)
chr8 (14-91)||(23241440-23241517)
chr8 (18-81)||(15887060-15887123)
chr8 (22-91)||(18829252-18829321)
chr8 (56-96)||(25264020-25264060)
chr8 (50-96)||(15929673-15929719)
[»] scaffold0228 (3 HSPs)
scaffold0228 (14-96)||(6316-6398)
scaffold0228 (14-96)||(13898-13980)
scaffold0228 (14-96)||(23850-23932)
[»] chr5 (14 HSPs)
chr5 (14-96)||(17170328-17170410)
chr5 (18-91)||(18223375-18223448)
chr5 (14-91)||(24516767-24516844)
chr5 (18-94)||(19315702-19315778)
chr5 (14-91)||(22826936-22827013)
chr5 (14-94)||(19858749-19858829)
chr5 (14-98)||(22446785-22446869)
chr5 (31-93)||(10176021-10176081)
chr5 (26-97)||(31480307-31480377)
chr5 (50-92)||(17364851-17364893)
chr5 (25-92)||(22053212-22053278)
chr5 (17-98)||(25243028-25243109)
chr5 (17-98)||(25307180-25307261)
chr5 (14-91)||(26260408-26260485)
[»] scaffold0111 (2 HSPs)
scaffold0111 (14-96)||(25295-25377)
scaffold0111 (50-98)||(29225-29273)
[»] scaffold0018 (1 HSPs)
scaffold0018 (14-92)||(61852-61930)
[»] chr6 (18 HSPs)
chr6 (14-96)||(16896797-16896879)
chr6 (14-99)||(13310655-13310739)
chr6 (14-91)||(14355783-14355860)
chr6 (24-98)||(13562477-13562551)
chr6 (14-92)||(14565892-14565970)
chr6 (14-96)||(18027827-18027909)
chr6 (11-93)||(19976592-19976674)
chr6 (15-98)||(19969028-19969109)
chr6 (14-91)||(18558146-18558223)
chr6 (24-78)||(14894554-14894608)
chr6 (17-76)||(4176997-4177055)
chr6 (42-81)||(10975683-10975722)
chr6 (14-96)||(14672252-14672334)
chr6 (14-79)||(15514654-15514717)
chr6 (16-88)||(5484119-5484191)
chr6 (31-90)||(9296635-9296693)
chr6 (60-98)||(23301340-23301378)
chr6 (14-67)||(19980953-19981006)
[»] scaffold0039 (1 HSPs)
scaffold0039 (14-98)||(8621-8705)
[»] chr7 (13 HSPs)
chr7 (14-98)||(11773285-11773369)
chr7 (14-96)||(13761022-13761104)
chr7 (6-95)||(3169557-3169646)
chr7 (31-99)||(18083286-18083354)
chr7 (14-96)||(16095582-16095664)
chr7 (5-95)||(29740550-29740639)
chr7 (48-96)||(16197719-16197767)
chr7 (14-99)||(17923285-17923370)
chr7 (14-99)||(19070666-19070750)
chr7 (52-96)||(8326472-8326516)
chr7 (14-96)||(5549-5630)
chr7 (14-63)||(4485524-4485573)
chr7 (50-95)||(13146672-13146717)
[»] scaffold0964 (1 HSPs)
scaffold0964 (14-99)||(2923-3008)
[»] scaffold0050 (1 HSPs)
scaffold0050 (14-94)||(77996-78076)
[»] chr2 (10 HSPs)
chr2 (24-92)||(20511080-20511148)
chr2 (16-96)||(18995999-18996079)
chr2 (24-96)||(24282382-24282453)
chr2 (14-96)||(28774991-28775072)
chr2 (14-81)||(19285331-19285397)
chr2 (14-64)||(19901698-19901748)
chr2 (18-92)||(24699272-24699346)
chr2 (14-98)||(21654963-21655047)
chr2 (18-98)||(24689915-24689995)
chr2 (48-98)||(21909410-21909460)
[»] scaffold0007 (1 HSPs)
scaffold0007 (31-98)||(204092-204159)
[»] chr4 (12 HSPs)
chr4 (14-96)||(16571918-16572000)
chr4 (14-94)||(21982713-21982793)
chr4 (14-91)||(28801554-28801630)
chr4 (14-93)||(9273387-9273466)
chr4 (50-92)||(11777004-11777046)
chr4 (14-96)||(15712174-15712258)
chr4 (42-99)||(16684900-16684957)
chr4 (18-93)||(9253420-9253495)
chr4 (24-91)||(9567330-9567397)
chr4 (14-92)||(9652751-9652827)
chr4 (14-71)||(12333994-12334051)
chr4 (33-98)||(23269250-23269315)
[»] scaffold0014 (1 HSPs)
scaffold0014 (14-94)||(202204-202283)
[»] scaffold0196 (1 HSPs)
scaffold0196 (14-95)||(17701-17781)
[»] scaffold0193 (1 HSPs)
scaffold0193 (14-91)||(19660-19737)
[»] scaffold0186 (1 HSPs)
scaffold0186 (14-90)||(19821-19897)
[»] scaffold0004 (1 HSPs)
scaffold0004 (14-98)||(370687-370771)
[»] scaffold0112 (1 HSPs)
scaffold0112 (14-79)||(13966-14031)
[»] scaffold0040 (1 HSPs)
scaffold0040 (42-98)||(42367-42423)
[»] scaffold0772 (1 HSPs)
scaffold0772 (14-92)||(2111-2188)
[»] scaffold0205 (1 HSPs)
scaffold0205 (29-91)||(8755-8817)
[»] scaffold0001 (2 HSPs)
scaffold0001 (48-96)||(151223-151271)
scaffold0001 (50-92)||(155616-155658)
[»] scaffold0058 (1 HSPs)
scaffold0058 (5-95)||(73540-73628)
[»] scaffold0305 (1 HSPs)
scaffold0305 (14-60)||(10302-10348)
[»] scaffold0183 (1 HSPs)
scaffold0183 (14-76)||(11825-11886)
[»] scaffold0020 (1 HSPs)
scaffold0020 (48-90)||(109106-109148)
[»] scaffold0013 (1 HSPs)
scaffold0013 (14-99)||(6439-6524)
[»] scaffold0331 (1 HSPs)
scaffold0331 (14-63)||(5200-5249)


Alignment Details
Target: chr3 (Bit Score: 65; Significance: 3e-28; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 19659226 - 19659142
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 98  Q
    ||||||||| ||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19659226 atacacacatagacaattaatcacacaaaagcacatataaacacacataataaataattaaaataattctagcgaaaaacgggct 19659142  T

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Target: chr3; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 5348138 - 5348216
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa 92  Q
    ||||||||| ||||||||||||| ||| ||| | |||||||||||||||||||||||||||||||||| ||||||||||    
T  5348138 atacacacatagacaattaatcatatacaagtacatataaacacacataataaataattaaaataattctagcgaaaaa 5348216  T

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Target: chr3; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 19631372 - 19631290
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    ||||||||| ||||||||||||||| | ||||| ||||||||||||||||||||||| ||||| |||| |||| |||||||||    
T  19631372 atacacacagagacaattaatcacacacaagcacatataaacacacataataaataaataaaacaattctagcaaaaaacggg 19631290  T

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Target: chr3; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 4657452 - 4657509
Alignment:
Q  24 agacaattaatcacatagaagcatatataaacacacataataaataattaaaataatt 81  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  4657452 agacaattaatcacatacaagcacatataaacacacataataaataattaaaataatt 4657509  T

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Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 11832354 - 11832277
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 91  Q
    ||||||| | |||||| |||||||||| ||||| ||||||||| |||||| || |||||||||||||| |||||||||    
T  11832354 atacacatagagacaaataatcacatacaagcacatataaacatacataaaaattaattaaaataattctagcgaaaa 11832277  T

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Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 12252161 - 12252084
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 91  Q
    ||||||| | |||||| ||||| |||| ||||| |||| |||||||||||||| |||||||||||||| |||||||||    
T  12252161 atacacatagagacaaataatcgcatacaagcacatatgaacacacataataattaattaaaataattctagcgaaaa 12252084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 15044641 - 15044580
Alignment:
Q  31 taatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa 92  Q
    ||||||||||  |||| ||||||||||| ||||||||||||||||||||||||||| |||||    
T  15044641 taatcacatacgagcacatataaacacatataataaataattaaaataattatagcaaaaaa 15044580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 25660965 - 25660880
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaa-taattatagcgaaaaacgggct 98  Q
    ||||||||| || ||||||| |||||| ||||| ||||||||| ||||||||| ||| ||||| ||||| ||||||||||||||||    
T  25660965 atacacacagaggcaattaagcacatacaagcacatataaacatacataataattaaataaaaataattctagcgaaaaacgggct 25660880  T

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Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 25667370 - 25667285
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaa-taattatagcgaaaaacgggct 98  Q
    ||||||||| || ||||||| |||||| ||||| ||||||||| ||||||||| ||| ||||| ||||| ||||||||||||||||    
T  25667370 atacacacagaggcaattaagcacatacaagcacatataaacatacataataattaaataaaaataattctagcgaaaaacgggct 25667285  T

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Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 25673775 - 25673690
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaa-taattatagcgaaaaacgggct 98  Q
    ||||||||| || ||||||| |||||| ||||| ||||||||| ||||||||| ||| ||||| ||||| ||||||||||||||||    
T  25673775 atacacacagaggcaattaagcacatacaagcacatataaacatacataataattaaataaaaataattctagcgaaaaacgggct 25673690  T

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Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 11829214 - 11829296
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    ||||||||| ||| || |||||||||| ||| ||||||||||||||||||||| |||| ||| ||| | ||||||||| ||||    
T  11829214 atacacacagagataaataatcacatacaagaatatataaacacacataataattaataaaagtaaatctagcgaaaatcggg 11829296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 25680200 - 25680115
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaa-taattatagcgaaaaacgggct 98  Q
    ||||| ||| || ||||||| |||||| ||||| ||||||||| ||||||||| ||| ||||| ||||| ||||||||||||||||    
T  25680200 atacatacagaggcaattaagcacatacaagcacatataaacatacataataattaaataaaaataattctagcgaaaaacgggct 25680115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 25688504 - 25688419
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaa-taattatagcgaaaaacgggct 98  Q
    ||||| ||| || ||||||| |||||| ||||| ||||||||| ||||||||| ||| ||||| ||||| ||||||||||||||||    
T  25688504 atacatacagaggcaattaagcacatacaagcacatataaacatacataataattaaataaaaataattctagcgaaaaacgggct 25688419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 30104331 - 30104254
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 91  Q
    ||||||||||| |||  |||||||||| || || ||||||||||||||||| | |||||||||||||| |||| ||||    
T  30104331 atacacacaaaaacagataatcacatacaaacacatataaacacacataatcattaattaaaataattctagcaaaaa 30104254  T

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Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 16218326 - 16218278
Alignment:
Q  48 atataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    |||| |||||||||||||||||||||||||| || ||||||||||||||    
T  16218326 atatcaacacacataataaataattaaaatatttctagcgaaaaacggg 16218278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 10935225 - 10935307
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    |||||||||||| ||| |||||||| | || || |||| ||||||| |||||| |||||||||||| | |||| |||||||||    
T  10935225 atacacacaaaggcaaataatcacacataaacacatattaacacacttaataattaattaaaataaatctagcaaaaaacggg 10935307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 7770075 - 7770018
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataat 71  Q
    |||||| || ||||||| ||||||||| ||||| ||| ||||||||||||||||||||    
T  7770075 atacacgcagagacaataaatcacatacaagcacatacaaacacacataataaataat 7770018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 15540756 - 15540797
Alignment:
Q  52 aaacacacataataaataattaaaataattatagcgaaaaac 93  Q
    |||||||||||||||||||||||||||||| ||| |||||||    
T  15540756 aaacacacataataaataattaaaataattttagtgaaaaac 15540797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 4161665 - 4161586
Alignment:
Q  18 acacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 98  Q
    ||||| || |||||||||||||| ||||||||| ||||||| || | ||| ||||||||||| | ||||||||| ||||||    
T  4161665 acacagaggcaattaatcacataaaagcatataaaaacacatatta-aaacaattaaaataaatctagcgaaaatcgggct 4161586  T

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Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 13440903 - 13440947
Alignment:
Q  55 cacacataataaataattaaaataattatagcgaaaaacgggcta 99  Q
    |||| |||||||||||||||||| ||| |||||||||||||||||    
T  13440903 cacatataataaataattaaaatgattctagcgaaaaacgggcta 13440947  T

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Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 12695576 - 12695502
Alignment:
Q  17 cacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa 92  Q
    |||||| ||||||| ||||||||  ||||| |||| |||||| |||| | ||||||||||||||| ||||||||||    
T  12695576 cacacagagacaat-aatcacatgcaagcacatatcaacacatataagagataattaaaataattctagcgaaaaa 12695502  T

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Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 20421653 - 20421708
Alignment:
Q  24 agacaattaatcacatagaagcatatataaacacacataataaataattaaaataa 79  Q
    |||||||||||||| || ||||| ||||||||||| |||| || ||||||||||||    
T  20421653 agacaattaatcacgtacaagcacatataaacacatataaaaattaattaaaataa 20421708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 17394186 - 17394268
Alignment:
Q  16 acacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 98  Q
    ||||||| || ||| |||||||| | ||||||||||||||||  |||||||| ||| ||||||| | || |||||| ||||||    
T  17394186 acacacataggcaaataatcacacacaagcatatataaacacttataataaaaaataaaaataaatttaacgaaaatcgggct 17394268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 6224522 - 6224458
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataa 79  Q
    ||||||||| || |||||||||||||| ||||||||| ||||||| || | ||| |||||||||||    
T  6224522 atacacacagaggcaattaatcacataaaagcatataaaaacacatatta-aaacaattaaaataa 6224458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 96
Target Start/End: Original strand, 19431739 - 19431803
Alignment:
Q  31 taatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    |||||||||| ||||| ||||||||||| | || || |||||||||||| | ||||||||||||||    
T  19431739 taatcacatacaagcacatataaacacataaaa-aattaattaaaataaatctagcgaaaaacggg 19431803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 8e-26; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 23475264 - 23475180
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 98  Q
    ||||||||| ||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||| |||||||||| |||||    
T  23475264 atacacacagagacaattaatcacatacaagcacatataatcacacataataaataattaaaataattctagcgaaaaatgggct 23475180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 20408742 - 20408827
Alignment:
Q  11 aatatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    |||||||||||| |||||| |||||||| | ||  | ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20408742 aatatacacacatagacaaataatcacacacaaaaacatataaacacacataataagtaattaaaataattatagcgaaaaacggg 20408827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 21721000 - 21721080
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacg 94  Q
    ||||||||| |||||||||||||||||  |||| |||||||||||||||||||||||||||| | ||| ||||||||||||    
T  21721000 atacacacagagacaattaatcacatacgagcacatataaacacacataataaataattaaagtgattctagcgaaaaacg 21721080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 18621302 - 18621226
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa 92  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||  ||| |||| ||||||||||    
T  18621302 atacacacagagacaattaatcacatacaagcacatataaacacacataataaataat--aaaaaattctagcgaaaaa 18621226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 21424042 - 21424102
Alignment:
Q  31 taatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 91  Q
    |||||||||| ||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  21424042 taatcacatacaagcacatataaacacacataataattaattaaaataattctagcgaaaa 21424102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 22615874 - 22615950
Alignment:
Q  22 aaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 98  Q
    ||||| || |||||||||| ||||  ||||||||||||||||||||||||||||| |  ||||||||||||||||||    
T  22615874 aaagataaataatcacatacaagcgcatataaacacacataataaataattaaaacatctatagcgaaaaacgggct 22615950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 21981554 - 21981629
Alignment:
Q  6 cgaagaatatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataatt 81  Q
    |||| ||||||||||   |||||| |||||||||| ||||| |||| |||||||||||||| ||||||||||||||    
T  21981554 cgaataatatacacagtgagacaaataatcacatacaagcacatatgaacacacataataattaattaaaataatt 21981629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 21403160 - 21403228
Alignment:
Q  28 aattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    ||||||||||||| ||| |   |||||||||||||||||||||||||||||||| |||  |||||||||    
T  21403160 aattaatcacatacaagaaccaataaacacacataataaataattaaaataattctagtaaaaaacggg 21403228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 21682417 - 21682495
Alignment:
Q  18 acacaaagacaattaatcacatagaagcatatataaacacacataataaataatt-aaaataattatagcgaaaaacgg 95  Q
    ||||||||||||||||||||  | || || |||||||| |||||||  ||||||| ||||||||| |||||||||||||    
T  21682417 acacaaagacaattaatcacgcataaacacatataaacgcacataagcaataattcaaaataattctagcgaaaaacgg 21682495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 3e-25; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 18830062 - 18829983
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaac 93  Q
    ||||||||| ||||||||||| ||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  18830062 atacacacagagacaattaattacatacaagcacatataaatacacataataaataattaaaataattatagcgaaaaac 18829983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 25281802 - 25281877
Alignment:
Q  5 tcgaagaatatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataat 80  Q
    ||||| || ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  25281802 tcgaataaaatacacacaaagacaattaatcacatacaagcacatataaacacacataataaataattaaaataat 25281877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 23539739 - 23539657
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    ||||||||| ||| || |||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23539739 atacacacatagataaataatcacatacaagcgcatataaacacacataataaataattaaaataattatagcgaaaaacggg 23539657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 23543193 - 23543268
Alignment:
Q  21 caaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    |||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||| |||| |||||||||    
T  23543193 caaagacaattaatcatatataagcacatataaacacacataataaataattaaaataattctagcaaaaaacggg 23543268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 24625620 - 24625705
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggcta 99  Q
    ||||||||| |||||| |||||||||| ||||| ||||||||||| ||||||||||| |||||||||| ||||||||| |||||||    
T  24625620 atacacacagagacaaataatcacatacaagcacatataaacacatataataaataaataaaataattctagcgaaaatcgggcta 24625705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 16090705 - 16090627
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa 92  Q
    |||||||||||||||||||||||||   ||||  ||||| |||||||||||||||||||||||||||| ||||||||||    
T  16090705 atacacacaaagacaattaatcacacgcaagcgcatatagacacacataataaataattaaaataattctagcgaaaaa 16090627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 14393046 - 14392971
Alignment:
Q  18 acacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacg 94  Q
    ||||| ||||||||||||||||  ||||||| ||||||||| |||||||||||||||||||| | ||||||||||||    
T  14393046 acacacagacaattaatcacatgcaagcata-ataaacacatataataaataattaaaataaatctagcgaaaaacg 14392971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 20496234 - 20496153
Alignment:
Q  15 tacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    |||| ||| ||||||||||||| | | ||||| | ||||||||||||||||| |||||||||||||| ||||||||| ||||    
T  20496234 tacatacagagacaattaatcatacacaagcacaaataaacacacataataattaattaaaataattctagcgaaaatcggg 20496153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 23241517 - 23241440
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 91  Q
    ||||| ||||||||||||||||||| | ||||| || |||| ||||||||||||||| |||||||||| |||| ||||    
T  23241517 atacaaacaaagacaattaatcacacacaagcacatgtaaatacacataataaataaataaaataattttagccaaaa 23241440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 15887060 - 15887123
Alignment:
Q  18 acacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataatt 81  Q
    ||||| ||||||||||||||||| |||   |||||||||| |||||||||||||||||||||||    
T  15887060 acacagagacaattaatcacatacaagtgcatataaacacgcataataaataattaaaataatt 15887123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 91
Target Start/End: Original strand, 18829252 - 18829321
Alignment:
Q  22 aaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 91  Q
    ||||| || ||| |||||||||||| |||||||| |||| | |||||||||||||||||| ||| |||||    
T  18829252 aaagataaataaccacatagaagcacatataaacgcacacactaaataattaaaataattctagagaaaa 18829321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 25264020 - 25264060
Alignment:
Q  56 acacataataaataattaaaataattatagcgaaaaacggg 96  Q
    |||||||||||||||||||||||||| || |||||||||||    
T  25264020 acacataataaataattaaaataattctatcgaaaaacggg 25264060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 15929673 - 15929719
Alignment:
Q  50 ataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    ||||||| | ||||||||||| |||||||||| ||||||||||||||    
T  15929673 ataaacaaatataataaataaataaaataattttagcgaaaaacggg 15929719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 59; Significance: 1e-24; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 6398 - 6316
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    ||||||||| |||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  6398 atacacacagagacaaataatcacatacaagcacatataaacacacataataaataattaaaataattctagcgaaaatcggg 6316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 13980 - 13898
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    ||||||||| |||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  13980 atacacacagagacaaataatcacatacaagcacatataaacacacataataaataattaaaataattctagcgaaaatcggg 13898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 23932 - 23850
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    ||||||||| |||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  23932 atacacacagagacaaataatcacatacaagcacatataaacacacataataaataattaaaataattctagcgaaaatcggg 23850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 1e-24; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 17170328 - 17170410
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    ||||||||| ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  17170328 atacacacagagacaattaatcacatacaagcgcatataaacacacataataaataattaaaataattgtagagaaaaacggg 17170410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 18223448 - 18223375
Alignment:
Q  18 acacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 91  Q
    ||||||| | |||||||| |||| ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  18223448 acacaaatataattaatcgcatacaagcacatataaacacacataataaataattaaaataattctagcgaaaa 18223375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 24516767 - 24516844
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 91  Q
    ||||||||| ||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||| |||| ||||    
T  24516767 atacacacagagacaattaatcacatacaagcacatataaacgcacataataattaattaaaataattttagcaaaaa 24516844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 19315778 - 19315702
Alignment:
Q  18 acacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacg 94  Q
    ||||| |||||| |||||||||| ||||| ||||||||||||||||| |||||||||||||||||||  ||||||||    
T  19315778 acacagagacaaataatcacatacaagcacatataaacacacataatgaataattaaaataattatattgaaaaacg 19315702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 22827013 - 22826936
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 91  Q
    ||||||||| |||| | |||||||||| ||| | ||||| ||||||||||||| |||||||||||||| |||| ||||    
T  22827013 atacacacagagacgaataatcacatacaagaacatatagacacacataataattaattaaaataattctagcaaaaa 22826936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 19858829 - 19858749
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacg 94  Q
    ||||||||| |||||| |||||||| | |||   |||||| ||||||||||||||||||| ||||||| || |||||||||    
T  19858829 atacacacagagacaaataatcacacacaagagcatataaccacacataataaataattagaataattctaacgaaaaacg 19858749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 22446785 - 22446869
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 98  Q
    |||| |||| ||||||  ||||||||| |  || ||||||||||||||||||| ||| |||||||||| ||||||||| ||||||    
T  22446785 atacgcacatagacaaacaatcacatacacacacatataaacacacataataattaaataaaataattctagcgaaaatcgggct 22446869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 10176081 - 10176021
Alignment:
Q  31 taatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaac 93  Q
    |||||||||| || || |||||||||||  ||||||||||||||||||||| |||||||||||    
T  10176081 taatcacatacaaacacatataaacaca--taataaataattaaaataattctagcgaaaaac 10176021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 31480307 - 31480377
Alignment:
Q  26 acaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggc 97  Q
    |||| |||||| ||| ||||| |||||||||||||||||  ||||||||||||||| ||||||||| |||||    
T  31480307 acaaataatcatatacaagcacatataaacacacataat-gataattaaaataattctagcgaaaatcgggc 31480377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 17364851 - 17364893
Alignment:
Q  50 ataaacacacataataaataattaaaataattatagcgaaaaa 92  Q
    ||||||||| |||||||||||||||||||||| |||| |||||    
T  17364851 ataaacacatataataaataattaaaataattctagctaaaaa 17364893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 22053278 - 22053212
Alignment:
Q  25 gacaattaatcacatagaagcatatataaacacacataataaa-taattaaaataattatagcgaaaaa 92  Q
    ||||||||||||||||| |||| ||||||  |||| |||||||  ||||||||||| ||||||||||||    
T  22053278 gacaattaatcacataggagcacatataa--acacgtaataaagcaattaaaataaatatagcgaaaaa 22053212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 25243109 - 25243028
Alignment:
Q  17 cacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 98  Q
    |||||||||| || ||| |||||  || || | ||||||||| |||||||||| ||||||||||| |||| |||||| ||||    
T  25243109 cacacaaagaaaaataagcacatgtaaacacacataaacacatataataaatagttaaaataattctagctaaaaacaggct 25243028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 25307261 - 25307180
Alignment:
Q  17 cacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 98  Q
    |||||||||| || ||| |||||  || || | ||||||||| |||||||||| ||||||||||| |||| |||||| ||||    
T  25307261 cacacaaagaaaaataagcacatgtaaacacacataaacacatataataaatagttaaaataattctagctaaaaacaggct 25307180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 26260485 - 26260408
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 91  Q
    ||||||||| ||  || |||||||| | ||||||||| | ||||||||||||| |||| ||||||| | |||||||||    
T  26260485 atacacacagaggtaaataatcacacacaagcatataaatacacacataataattaataaaaataaatctagcgaaaa 26260408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 55; Significance: 3e-22; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 25295 - 25377
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    ||||||||| ||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||| ||| ||||| ||||    
T  25295 atacacacacagacaattaatcacatacaagcacatataaaaacacataataaataattaaaataattctagtgaaaatcggg 25377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 29273 - 29225
Alignment:
Q  50 ataaacacacataataaataattaaaataattatagcgaaaaacgggct 98  Q
    ||||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  29273 ataaacacatataataaataattaaaataattatagcaaaaaacaggct 29225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 61852 - 61930
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa 92  Q
    ||||||||| ||||||||||||||||| || || ||||| |||||||||||||||||||||||||||| ||||||||||    
T  61852 atacacacagagacaattaatcacatataaacaaatatagacacacataataaataattaaaataattctagcgaaaaa 61930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 3e-22; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 16896797 - 16896879
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    ||||||||| |||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||| || | |||||||||    
T  16896797 atacacacagagacaattcatcacatacaagcacatataaacacacataataaataattaaaataattctaacaaaaaacggg 16896879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 13310655 - 13310739
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggcta 99  Q
    ||||||||||||||||||||| ||||||||||| | ||||| ||||||||||||||| |||||||| | ||||||||| |||||||    
T  13310655 atacacacaaagacaattaattacatagaagcacacataaatacacataataaataa-taaaataaatctagcgaaaatcgggcta 13310739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 14355783 - 14355860
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 91  Q
    ||||||||| || |||| ||||||| | ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  14355783 atacacacagaggcaatcaatcacacacaagcacatataaacacacataataaataattaaaataattttagcgaaaa 14355860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 13562551 - 13562477
Alignment:
Q  24 agacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 98  Q
    ||||||||||||||| | ||||  ||||||||||| |||||||||| ||||||||||| ||||||||||||||||    
T  13562551 agacaattaatcacacacaagcgaatataaacacatataataaatatttaaaataattttagcgaaaaacgggct 13562477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 14565970 - 14565892
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa 92  Q
    ||||||||||||||||||||||||| | ||  | |||||||||||||||||||||||||||||||| | || |||||||    
T  14565970 atacacacaaagacaattaatcacacataaaaacatataaacacacataataaataattaaaataaatctaacgaaaaa 14565892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 18027909 - 18027827
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    ||||||||| ||| || |||||||| | ||||| |||||||||||||||||||||||||||||||||| || | |||||||||    
T  18027909 atacacacagagataaataatcacacacaagcacatataaacacacataataaataattaaaataattctatcaaaaaacggg 18027827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 19976674 - 19976592
Alignment:
Q  11 aatatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaac 93  Q
    ||||||||||||||| ||| |||||||| | ||||| ||||||||||| ||||||||||| |||||||||| ||| |||||||    
T  19976674 aatatacacacaaaggcaaataatcacacaaaagcacatataaacacatataataaataactaaaataattctagagaaaaac 19976592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 19969109 - 19969028
Alignment:
Q  15 tacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 98  Q
    |||| |||||| ||||||||||| || ||||| ||| ||||||||||  |||||||||||||||||||||||||||||| ||||    
T  19969109 tacatacaaaggcaattaatcacttacaagcacataaaaacacacat--taaataattaaaataattatagcgaaaaacaggct 19969028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 18558146 - 18558223
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 91  Q
    ||||||||| |||||| ||| |||||| ||||| ||||||||| ||||||||| |||||||||||||| || ||||||    
T  18558146 atacacacatagacaaataaacacatacaagcacatataaacatacataataattaattaaaataattctaacgaaaa 18558223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 14894554 - 14894608
Alignment:
Q  24 agacaattaatcacatagaagcatatataaacacacataataaataattaaaata 78  Q
    |||||| |||||| ||| ||||| |||||||||||||||||||||||||||||||    
T  14894554 agacaaataatcatatacaagcacatataaacacacataataaataattaaaata 14894608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 4177055 - 4176997
Alignment:
Q  17 cacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaa 76  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||| ||| ||||||||    
T  4177055 cacacaaagacaaataatcacatatgagcatatataaacacacataa-aaacaattaaaa 4176997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 10975683 - 10975722
Alignment:
Q  42 aagcatatataaacacacataataaataattaaaataatt 81  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  10975683 aagcatatataaacacacataataattaattaaaataatt 10975722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 14672252 - 14672334
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    ||||||||| || |||||||||||||| ||||| ||||||| ||| |||| || |||||||||||| | || |||||| ||||    
T  14672252 atacacacagaggcaattaatcacatacaagcacatataaatacatataaaaattaattaaaataaatctaacgaaaatcggg 14672334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 15514717 - 15514654
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataa 79  Q
    ||||||||| || |||||||||||||| |||||||||||||  ||||||| || ||||||||||||    
T  15514717 atacacacagaggcaattaatcacatacaagcatatataaa--cacataaaaattaattaaaataa 15514654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 5484191 - 5484119
Alignment:
Q  16 acacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcga 88  Q
    ||||||| |||||| |||||||||| || || | |||||||  ||||||||||||||| ||||||| ||||||    
T  5484191 acacacagagacaactaatcacatacaaacacacataaacatgcataataaataattagaataattctagcga 5484119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 9296635 - 9296693
Alignment:
Q  31 taatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaa 90  Q
    |||||||||| ||||| ||||||| ||||||||||||||| |||||||| | ||||||||    
T  9296635 taatcacatacaagcacatataaatacacataataaataa-taaaataaatctagcgaaa 9296693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 98
Target Start/End: Original strand, 23301340 - 23301378
Alignment:
Q  60 ataataaataattaaaataattatagcgaaaaacgggct 98  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  23301340 ataataaataaataaaataattctagcgaaaaacgggct 23301378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 19980953 - 19981006
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaa 67  Q
    ||||||||| |  |||||||||||| | ||||||||| ||||||||||||||||    
T  19980953 atacacacatatgcaattaatcacacataagcatatacaaacacacataataaa 19981006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 8621 - 8705
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 98  Q
    ||||||||| |||| | |||||||||| ||||| |||||||||||||||||||||||||||||||||| |||| |||||| ||||    
T  8621 atacacacagagacgagtaatcacatacaagcacatataaacacacataataaataattaaaataattctagcaaaaaacaggct 8705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 5e-21; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 11773369 - 11773285
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 98  Q
    ||||||||| |||||| || ||||| | ||||| |||||||||||||||||||||||||||||||||| || |||||||||||||    
T  11773369 atacacacagagacaaatagtcacacacaagcacatataaacacacataataaataattaaaataattttaacgaaaaacgggct 11773285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 13761104 - 13761022
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    ||||||||| |||||| |||||||||| ||| | ||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  13761104 atacacacatagacaaataatcacatacaagtacatataaatacacataataaataattaaaataattccagcgaaaaacggg 13761022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 3169646 - 3169557
Alignment:
Q  6 cgaagaatatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgg 95  Q
    ||||||| ||||||||||||| || | |||||||  ||  | |||||||||||||||||||||| ||||||||||| |||||||||||||    
T  3169646 cgaagaaaatacacacaaagataaatgatcacatgcaacaacatataaacacacataataaatatttaaaataattctagcgaaaaacgg 3169557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 18083286 - 18083354
Alignment:
Q  31 taatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggcta 99  Q
    |||||||||| ||||| ||||||||||| |||||||||||||||||||||| | | |||||||||||||    
T  18083286 taatcacatacaagcacatataaacacatataataaataattaaaataattctcgggaaaaacgggcta 18083354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 16095582 - 16095664
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    |||||||||||||||| |||  ||| | || || ||||||||||||||||  |||||||||||||||| |||| |||||||||    
T  16095582 atacacacaaagacaactaagtacaaacaaacacatataaacacacataaataataattaaaataattctagctaaaaacggg 16095664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 29740639 - 29740550
Alignment:
Q  5 tcgaagaatatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgg 95  Q
    ||||| || ||||||||| |||||| |||||||||| || || |||||| ||||||||||| | ||||||||||||| || ||||||||||    
T  29740639 tcgaataaaatacacacatagacaaataatcacataaaa-cacatataagcacacataatagacaattaaaataattctaacgaaaaacgg 29740550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 16197719 - 16197767
Alignment:
Q  48 atataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    ||||||||||| |||||||||||||||||||||| || |||||||||||    
T  16197719 atataaacacatataataaataattaaaataattctaacgaaaaacggg 16197767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 17923285 - 17923370
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaa-taattatagcgaaaaacgggcta 99  Q
    ||||||||| |||||||||||||||||  |||||| |||||||||||| | ||| |||||||| ||| | ||||||||| |||||||    
T  17923285 atacacacatagacaattaatcacatacgagcataaataaacacacatta-aaacaattaaaattaaatctagcgaaaatcgggcta 17923370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 19070666 - 19070750
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggcta 99  Q
    ||||||||| ||||||  |||||||||  |||||| |||||||||||||| ||| ||||||||||| | || |||||| |||||||    
T  19070666 atacacacatagacaaacaatcacatacgagcataaataaacacacataa-aaacaattaaaataaatctaacgaaaatcgggcta 19070750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 8326516 - 8326472
Alignment:
Q  52 aaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||    
T  8326516 aaacactcataataaataatgaaaataattctagcgaaaaacggg 8326472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 5549 - 5630
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    ||||||||| || ||| |||||||||  |||| || ||||||||||||||||||||| |||||||| | ||||| ||| ||||    
T  5549 atacacacagaggcaaataatcacatgcaagcttaaataaacacacataataaataa-taaaataaatctagcgtaaatcggg 5630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 4485524 - 4485573
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataa 63  Q
    ||||||||| || |||||||||||||| ||||||||| ||||||| ||||    
T  4485524 atacacacagaggcaattaatcacataaaagcatataaaaacacatataa 4485573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 13146672 - 13146717
Alignment:
Q  50 ataaacacacataataaataattaaaataattatagcgaaaaacgg 95  Q
    ||||||||| |||||||||||||||||||||| || | ||||||||    
T  13146672 ataaacacatataataaataattaaaataattctatcaaaaaacgg 13146717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0964 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0964
Description:

Target: scaffold0964; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 2923 - 3008
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggcta 99  Q
    |||||||||||||||| |||||| ||| ||||| ||||||||| ||| |||||||||||||| ||||| ||| |||||||||||||    
T  2923 atacacacaaagacaaataatcagatacaagcacatataaacatacaaaataaataattaaattaattctagtgaaaaacgggcta 3008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 77996 - 78076
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacg 94  Q
    ||||||||| |||||| |||||||||| |||||  |||||| ||||||||||||||||||||| |||| ||||||||||||    
T  77996 atacacacacagacaaataatcacatacaagcacctataaatacacataataaataattaaaagaattctagcgaaaaacg 78076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 1e-18; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 20511080 - 20511148
Alignment:
Q  24 agacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa 92  Q
    ||||||||||||||||| || || ||||||||| |||||||||||||||||||||||| ||||||||||    
T  20511080 agacaattaatcacatacaaacacatataaacatacataataaataattaaaataattctagcgaaaaa 20511148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 18995999 - 18996079
Alignment:
Q  16 acacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    ||||||| |||||| |||||| ||| ||||| | ||||||||||||||||| |||||||||||| ||| ||||||| ||||    
T  18995999 acacacagagacaaataatcatatacaagcacaaataaacacacataataattaattaaaataactattgcgaaaatcggg 18996079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 24282382 - 24282453
Alignment:
Q  24 agacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    ||||||||||||| ||| ||||| |||||| |||| |||||||||||||||||||||| ||| ||||||||||    
T  24282382 agacaattaatcatatacaagcacatataa-cacaaataataaataattaaaataattttagtgaaaaacggg 24282453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 28774991 - 28775072
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    ||||||||| |||||| |||||| ||| || || |||||| ||||| ||||||||||||||||| ||| ||||||||||||||    
T  28774991 atacacacacagacaaataatcatatacaaacacatataatcacacgtaataaataattaaaat-attctagcgaaaaacggg 28775072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 19285331 - 19285397
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataatt 81  Q
    ||||||||| ||||||||||||||| | || |  |||||| |||||||||||||||||||||||||||    
T  19285331 atacacacagagacaattaatcacacacaaacgcatataa-cacacataataaataattaaaataatt 19285397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 19901748 - 19901698
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataat 64  Q
    ||||||||||||| ||||||||||||| ||| | |||||||||||||||||    
T  19901748 atacacacaaagaaaattaatcacatacaagaacatataaacacacataat 19901698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 24699346 - 24699272
Alignment:
Q  18 acacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa 92  Q
    |||||||| ||||||| |||| | ||  | ||||||||||| |||||||||||||||||||||| || |||||||    
T  24699346 acacaaaggcaattaagcacacataaatacatataaacacatataataaataattaaaataattctatcgaaaaa 24699272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 21654963 - 21655047
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 98  Q
    ||||||||| | |||| || ||||| | ||||  |||||| |||||||||||||||||||| |||||| |||| |||||| ||||    
T  21654963 atacacacagatacaaatagtcacacacaagcgcatataatcacacataataaataattaagataattttagcaaaaaacaggct 21655047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 24689995 - 24689915
Alignment:
Q  18 acacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 98  Q
    |||||||| ||||||| |||| | ||  | ||||| ||||| |||||||||||||||||||||| || ||||||| |||||    
T  24689995 acacaaaggcaattaagcacacataaatacatatatacacatataataaataattaaaataattctatcgaaaaatgggct 24689915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 21909460 - 21909410
Alignment:
Q  48 atataaacacacataataaataattaaaataattatagcgaaaaacgggct 98  Q
    ||||||||||| |||||||||||||||||||||| || | ||||| |||||    
T  21909460 atataaacacatataataaataattaaaataattctatctaaaaatgggct 21909410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 204159 - 204092
Alignment:
Q  31 taatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 98  Q
    |||||||| | || ||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  204159 taatcacacacaaacatatataaacacacataataaataattaaaataattctaacgaaaaacgggct 204092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 16571918 - 16572000
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    ||||| ||| |||||||||||||||||  || | ||||||| |||||||||||||||||||| |||| |||||||||||||||    
T  16571918 atacatacatagacaattaatcacatacgaggacatataaatacacataataaataattaaattaatcatagcgaaaaacggg 16572000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 21982713 - 21982793
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacg 94  Q
    ||||||||||||| || |||||| ||| ||||| |||||| |||||||||||||||| |||||||||| || |||||||||    
T  21982713 atacacacaaagataaataatcatatacaagcacatataagcacacataataaataaataaaataattctaacgaaaaacg 21982793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 28801554 - 28801630
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 91  Q
    ||||||||| |||||| || ||| ||| ||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  28801554 atacacacagagacaaata-tcatatacaagcacatataaacacacataataattaattaaaataattctagcgaaaa 28801630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 9273387 - 9273466
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaac 93  Q
    ||||||||| ||||||||||||| | | || |||||| ||||| |||||||||| ||||||| ||||| |||| ||||||    
T  9273387 atacacacagagacaattaatcaaacataaacatatagaaacaaacataataaacaattaaattaattctagctaaaaac 9273466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 11777004 - 11777046
Alignment:
Q  50 ataaacacacataataaataattaaaataattatagcgaaaaa 92  Q
    |||||||||||||||||||| ||||||||||| ||||||||||    
T  11777004 ataaacacacataataaatagttaaaataattctagcgaaaaa 11777046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 15712174 - 15712258
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacaca--taataaataattaaaataattatagcgaaaaacggg 96  Q
    |||||||||||| |||||||||||| | |||||  |||||||||| |   ||||||||| |||||||||| || |||||||||||    
T  15712174 atacacacaaaggcaattaatcacacacaagcacttataaacacataataaataaataaataaaataattctaacgaaaaacggg 15712258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 16684900 - 16684957
Alignment:
Q  42 aagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggcta 99  Q
    ||||| ||||||||||| | || |||||| |||||||||| |||||||||||||||||    
T  16684900 aagcacatataaacacataaaacaaataaataaaataattctagcgaaaaacgggcta 16684957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 9253420 - 9253495
Alignment:
Q  18 acacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaac 93  Q
    ||||| ||||||||||||| | | || |||||||||||| ||||||||||| ||| || ||||| |||| ||||||    
T  9253420 acacagagacaattaatcatacataaacatatataaacaaacataataaatcatttaattaattctagctaaaaac 9253495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 9567330 - 9567397
Alignment:
Q  24 agacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 91  Q
    |||||| |||||||||| |  || |||||| |||||||||||| |||||||||||||| ||| |||||    
T  9567330 agacaaataatcacatacagacacatataaccacacataataattaattaaaataattctagtgaaaa 9567397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 9652751 - 9652827
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa 92  Q
    ||||||||| ||||||||| ||||||| ||||| ||||||  |||||||| || |||||||||||| | || |||||||    
T  9652751 atacacacagagacaattagtcacataaaagcacatataa--acacataaaaattaattaaaataaatctaacgaaaaa 9652827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 12334051 - 12333994
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataat 71  Q
    ||||||||| ||||||||||||||| | |  || ||||||||||||||||||| ||||    
T  12334051 atacacacatagacaattaatcacaaacagacacatataaacacacataataattaat 12333994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 23269315 - 23269250
Alignment:
Q  33 atcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 98  Q
    |||||| | ||||| |||||||||||||  | || |||||||||||| ||||||||||| ||||||    
T  23269315 atcacacacaagcacatataaacacacaataaaagtaattaaaataaatatagcgaaaatcgggct 23269250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 202283 - 202204
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacg 94  Q
    ||||||||| |||||| || ||||||| ||||| ||||||| |||||||||||||||||||||||||| || |||||||||    
T  202283 atacacacagagacaaata-tcacatacaagcacatataaatacacataataaataattaaaataattctatcgaaaaacg 202204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0196 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 17781 - 17701
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgg 95  Q
    |||||||||||||||| |||||||| | |||   |||||| |||| |||||||||||||||||||||| |||||||||||||    
T  17781 atacacacaaagacaaataatcacacacaagtgcatataa-cacatataataaataattaaaataattctagcgaaaaacgg 17701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 19660 - 19737
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 91  Q
    |||||||||  |||||||| |||| || ||||| ||||||||||||||||||| |||||||||||||| ||| |||||    
T  19660 atacacacagtgacaattattcacttacaagcagatataaacacacataataattaattaaaataattctagggaaaa 19737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 19821 - 19897
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaa 90  Q
    |||||||||  |||||||||||||| | || || ||||||||||| |||||||||||||||||||||| || |||||    
T  19821 atacacacatggacaattaatcacacataaacacatataaacacatataataaataattaaaataattctaacgaaa 19897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 370771 - 370687
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 98  Q
    |||||||||  |||||||||||||| | || ||  |||||||||| |||||||| ||||||||||||| |||||||||| |||||    
T  370771 atacacacagggacaattaatcacacataaacacgtataaacacatataataaacaattaaaataattctagcgaaaaatgggct 370687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 13966 - 14031
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataa 79  Q
    ||||||||| || |||||||||||||||||||| ||||||||| | |||||||  |||||||||||    
T  13966 atacacacagaggcaattaatcacatagaagcacatataaacatatataataatgaattaaaataa 14031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 42423 - 42367
Alignment:
Q  42 aagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 98  Q
    ||||| ||| || |||| |||||||||||||||||||||| ||||||||||||||||    
T  42423 aagcacatacaaccacatataataaataattaaaataattctagcgaaaaacgggct 42367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 2188 - 2111
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa 92  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||| | |||| ||||||| ||||||| | || |||||||    
T  2188 atacacacagagacaattaatcacatataagcacatataaacatatataa-aaataataaaaataaatgtaacgaaaaa 2111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 8755 - 8817
Alignment:
Q  29 attaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 91  Q
    |||||||||||| ||||||| |||||||||||||||||  ||| ||||||| | |||||||||    
T  8755 attaatcacatacaagcataaataaacacacataataacaaataaaaataaatctagcgaaaa 8817  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 151271 - 151223
Alignment:
Q  48 atataaacacacataataaataattaaaataattatagcgaaaaacggg 96  Q
    ||||||||| |||||| || ||||||||||||||||||| |||||||||    
T  151271 atataaacatacataaaaattaattaaaataattatagcaaaaaacggg 151223  T

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Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 155616 - 155658
Alignment:
Q  50 ataaacacacataataaataattaaaataattatagcgaaaaa 92  Q
    ||||||||  |||||||||||||||||||||| ||||||||||    
T  155616 ataaacacgtataataaataattaaaataattctagcgaaaaa 155658  T

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Target: scaffold0058 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 73540 - 73628
Alignment:
Q  5 tcgaagaatatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgg 95  Q
    ||||| || ||||||||| | |||| |||| ||| | ||||| |||||||||||||  |||||||  |||||||||| |||||||||||||    
T  73540 tcgaataaaatacacacagaaacaaataatgacacacaagcacatataaacacaca--ataaatatataaaataattctagcgaaaaacgg 73628  T

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Target: scaffold0305 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 10302 - 10348
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacaca 60  Q
    ||||||||| ||||||||||||||| | ||||| |||||||||||||    
T  10302 atacacacatagacaattaatcacagacaagcacatataaacacaca 10348  T

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Target: scaffold0183 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 11825 - 11886
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaa 76  Q
    |||||||||||| |||||||||||||  ||||| ||||||||||| || | ||||||||||||    
T  11825 atacacacaaaggcaattaatcacatttaagcagatataaacacatatta-aaataattaaaa 11886  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 109106 - 109148
Alignment:
Q  48 atataaacacacataataaataattaaaataattatagcgaaa 90  Q
    ||||||||||| ||||||| |||||||||||||| ||||||||    
T  109106 atataaacacatataataattaattaaaataattctagcgaaa 109148  T

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Target: scaffold0013 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 6524 - 6439
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataatt-aaaataattatagcgaaaaacgggcta 99  Q
    ||||||||| || ||||||||||||||  |||||| | |||||||||||| ||| |||| ||||||| | ||||||||| |||||||    
T  6524 atacacacataggcaattaatcacatacgagcataaacaaacacacataa-aaacaattaaaaataaatctagcgaaaatcgggcta 6439  T

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Target: scaffold0331 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 5249 - 5200
Alignment:
Q  14 atacacacaaagacaattaatcacatagaagcatatataaacacacataa 63  Q
    ||||||||| || |||||||||||| | ||||| ||||||||||||||||    
T  5249 atacacacagaggcaattaatcacaaacaagcacatataaacacacataa 5200  T

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