View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15163_low_114 (Length: 249)
Name: NF15163_low_114
Description: NF15163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15163_low_114 |
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Alignment Details
Target: chr1 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 36232307 - 36232073
Alignment:
| Q |
1 |
tagtattatttaactatattttacagaaaaacatgagttggaggcagctcatcaaacagctttgttactttattgcatcgagaaagatgagtaaactgtt |
100 |
Q |
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| T |
36232307 |
tagtattatttaactatattttacagaaaaacatgagttggaggcagctcatcaaacagctttgttactttatttcatcgagaaagatgagtaaactgct |
36232208 |
T |
|
| Q |
101 |
aaattgatcttggtctctttaaccactttcaaattagtcctgactctgacaatattttaaatttcaagtaactctatcttcgttaaaagttttttaatta |
200 |
Q |
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|||||||||||||||| | |||||||||| ||||||||| ||| ||||| ||||||||||||||||| |||||||||||| |||||||||||| ||||| |
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| T |
36232207 |
aaattgatcttggtctttgtaaccacttttaaattagtcatgattctgataatattttaaatttcaaataactctatctttattaaaagtttttcaatta |
36232108 |
T |
|
| Q |
201 |
agtcattgtaatttgtatgtttttaataagctatt |
235 |
Q |
| |
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||||||||||||||||||||||||||||||||| |
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| T |
36232107 |
gatcattgtaatttgtatgtttttaataagctatt |
36232073 |
T |
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