View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15163_low_125 (Length: 239)
Name: NF15163_low_125
Description: NF15163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15163_low_125 |
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Alignment Details
Target: chr6 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 26577503 - 26577726
Alignment:
| Q |
1 |
caaattttaattaacacctttagt-aaactagatattaagacactacataannnnnnnctaaatgatcttattaattttattttagtggttagtaatcat |
99 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
26577503 |
caaattttaattaacacctttagttaaactagatattaagacactacataatttttttctaaatgatcttattaattttattttagtggttagtaatcat |
26577602 |
T |
|
| Q |
100 |
tgtacgagnnnnnnnnnnnacctaaactcgaccctcttttgtcccattaggttgactcaaaatttgaaaaactatagtaccaaagcattaatctttcaca |
199 |
Q |
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|||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26577603 |
tgtacgagtttttttttt-acctaaaatctaccctcttttgtcccattaggttgactcaaaatttgaaaaactatagtaccaaagcattaatctttcaca |
26577701 |
T |
|
| Q |
200 |
aagctaaaatacaaaaggtactatt |
224 |
Q |
| |
|
||||||||||||||||||||||||| |
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|
| T |
26577702 |
aagctaaaatacaaaaggtactatt |
26577726 |
T |
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