View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15163_low_90 (Length: 284)

Name: NF15163_low_90
Description: NF15163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15163_low_90
NF15163_low_90
[»] chr3 (66 HSPs)
chr3 (3-265)||(14570661-14570932)
chr3 (3-258)||(15954020-15954274)
chr3 (111-258)||(15934015-15934161)
chr3 (152-227)||(12203286-12203361)
chr3 (3-194)||(11643937-11644129)
chr3 (3-196)||(17497039-17497232)
chr3 (110-227)||(29551840-29551958)
chr3 (111-227)||(46070237-46070354)
chr3 (3-219)||(12275120-12275340)
chr3 (116-187)||(12536869-12536940)
chr3 (3-176)||(15519328-15519501)
chr3 (115-227)||(9690594-9690707)
chr3 (116-185)||(12153829-12153898)
chr3 (110-196)||(13692888-13692975)
chr3 (110-215)||(20376381-20376487)
chr3 (110-196)||(2498200-2498287)
chr3 (115-177)||(11963325-11963388)
chr3 (110-176)||(54090912-54090979)
chr3 (110-177)||(49164073-49164142)
chr3 (115-196)||(54832366-54832448)
chr3 (110-181)||(10596825-10596897)
chr3 (3-55)||(12355292-12355344)
chr3 (3-55)||(12361791-12361843)
chr3 (111-183)||(16822942-16823014)
chr3 (115-177)||(11955771-11955834)
chr3 (115-177)||(12724306-12724369)
chr3 (110-176)||(18718297-18718364)
chr3 (110-181)||(18756107-18756178)
chr3 (111-185)||(20188707-20188782)
chr3 (110-184)||(28759775-28759850)
chr3 (115-176)||(15375557-15375619)
chr3 (115-176)||(16330791-16330853)
chr3 (211-245)||(16822870-16822904)
chr3 (115-176)||(16834143-16834205)
chr3 (3-49)||(17197849-17197895)
chr3 (3-49)||(17198315-17198361)
chr3 (110-175)||(18961867-18961932)
chr3 (115-176)||(27034026-27034087)
chr3 (110-181)||(8373089-8373161)
chr3 (3-55)||(12478966-12479018)
chr3 (110-177)||(30596036-30596104)
chr3 (110-181)||(32387190-32387262)
chr3 (111-185)||(11849588-11849663)
chr3 (13-60)||(11849713-11849760)
chr3 (110-176)||(12256529-12256596)
chr3 (13-60)||(13667203-13667250)
chr3 (110-184)||(21353092-21353167)
chr3 (110-196)||(50655164-50655251)
chr3 (115-177)||(51854278-51854341)
chr3 (115-177)||(53570407-53570470)
chr3 (115-176)||(6926795-6926857)
chr3 (111-219)||(11304875-11304985)
chr3 (225-259)||(12201293-12201327)
chr3 (111-227)||(14288128-14288245)
chr3 (110-196)||(14844321-14844407)
chr3 (115-184)||(16413450-16413520)
chr3 (110-176)||(12960548-12960616)
chr3 (211-247)||(13036069-13036106)
chr3 (3-48)||(18135607-18135652)
chr3 (115-175)||(19343444-19343505)
chr3 (157-185)||(11889254-11889282)
chr3 (3-43)||(11964210-11964250)
chr3 (3-43)||(12724431-12724471)
chr3 (3-55)||(12960660-12960712)
chr3 (3-43)||(18718420-18718460)
chr3 (9-49)||(18961777-18961817)
[»] chr8 (57 HSPs)
chr8 (3-260)||(20007101-20007367)
chr8 (3-179)||(14593885-14594062)
chr8 (110-219)||(20258104-20258214)
chr8 (110-219)||(21044734-21044844)
chr8 (3-183)||(20004842-20005022)
chr8 (3-261)||(20838989-20839247)
chr8 (111-194)||(19860482-19860566)
chr8 (110-196)||(16265988-16266075)
chr8 (110-179)||(21682835-21682904)
chr8 (3-194)||(36444881-36445073)
chr8 (124-196)||(14564435-14564507)
chr8 (124-196)||(14567968-14568040)
chr8 (3-78)||(19987429-19987505)
chr8 (155-218)||(20773176-20773240)
chr8 (155-218)||(20782970-20783034)
chr8 (3-196)||(21685200-21685393)
chr8 (3-196)||(21689549-21689742)
chr8 (110-196)||(23223817-23223904)
chr8 (110-176)||(43688312-43688379)
chr8 (3-183)||(22744569-22744748)
chr8 (112-196)||(3223802-3223887)
chr8 (3-55)||(20258258-20258310)
chr8 (3-55)||(21044888-21044940)
chr8 (110-176)||(11391746-11391813)
chr8 (110-176)||(14745658-14745725)
chr8 (110-183)||(23654335-23654409)
chr8 (110-215)||(27364223-27364328)
chr8 (115-176)||(29304768-29304830)
chr8 (3-49)||(29329023-29329069)
chr8 (94-196)||(27346574-27346674)
chr8 (110-177)||(7003208-7003276)
chr8 (89-176)||(19297425-19297511)
chr8 (110-177)||(26485153-26485221)
chr8 (110-177)||(40143479-40143547)
chr8 (110-184)||(9204482-9204557)
chr8 (110-176)||(10955825-10955892)
chr8 (3-38)||(20773345-20773380)
chr8 (3-38)||(20783139-20783174)
chr8 (211-258)||(21685129-21685175)
chr8 (211-258)||(21689478-21689524)
chr8 (110-176)||(31411650-31411717)
chr8 (110-176)||(31417832-31417899)
chr8 (3-49)||(1264896-1264942)
chr8 (225-259)||(9272232-9272266)
chr8 (13-55)||(21682949-21682991)
chr8 (63-183)||(25623794-25623914)
chr8 (115-176)||(27890813-27890874)
chr8 (115-176)||(27897146-27897207)
chr8 (115-176)||(27903052-27903113)
chr8 (115-176)||(27949471-27949532)
chr8 (115-176)||(29298213-29298275)
chr8 (115-176)||(29329124-29329186)
chr8 (115-179)||(4519865-4519930)
chr8 (115-179)||(22459027-22459092)
chr8 (124-184)||(16886429-16886489)
chr8 (3-51)||(19860385-19860433)
chr8 (152-196)||(35541965-35542009)
[»] chr7 (81 HSPs)
chr7 (3-262)||(13318551-13318814)
chr7 (3-262)||(15436612-15436881)
chr7 (3-227)||(14168637-14168861)
chr7 (3-227)||(14172884-14173108)
chr7 (111-259)||(15097019-15097166)
chr7 (111-241)||(15103410-15103542)
chr7 (3-240)||(81168-81408)
chr7 (110-218)||(15085067-15085175)
chr7 (3-183)||(45186302-45186482)
chr7 (111-227)||(12555403-12555519)
chr7 (3-196)||(14580675-14580868)
chr7 (116-196)||(11854538-11854618)
chr7 (115-223)||(3328762-3328871)
chr7 (116-196)||(10520753-10520833)
chr7 (110-212)||(33405576-33405679)
chr7 (116-181)||(32772392-32772457)
chr7 (111-183)||(15143174-15143246)
chr7 (111-183)||(16475265-16475337)
chr7 (110-196)||(11340665-11340752)
chr7 (110-181)||(18956015-18956086)
chr7 (115-177)||(30270964-30271027)
chr7 (110-177)||(12454985-12455053)
chr7 (110-196)||(5186403-5186490)
chr7 (110-181)||(16951369-16951440)
chr7 (110-196)||(18436351-18436438)
chr7 (1-55)||(12429685-12429739)
chr7 (115-176)||(16843050-16843112)
chr7 (211-259)||(12800665-12800714)
chr7 (3-60)||(15103593-15103650)
chr7 (3-55)||(3328659-3328711)
chr7 (113-176)||(6412794-6412858)
chr7 (124-184)||(11298870-11298930)
chr7 (124-184)||(11307234-11307294)
chr7 (110-177)||(12462441-12462509)
chr7 (110-176)||(13020631-13020698)
chr7 (110-176)||(13026838-13026905)
chr7 (111-185)||(17467381-17467456)
chr7 (111-185)||(17585758-17585833)
chr7 (110-184)||(26089123-26089198)
chr7 (110-184)||(26112928-26113003)
chr7 (110-184)||(26119545-26119620)
chr7 (110-176)||(26288917-26288983)
chr7 (110-196)||(30602021-30602108)
chr7 (111-185)||(37380861-37380936)
chr7 (110-176)||(750768-750834)
chr7 (110-176)||(40683942-40684008)
chr7 (115-176)||(46175250-46175312)
chr7 (110-176)||(48987101-48987167)
chr7 (110-179)||(2309-2378)
chr7 (3-60)||(15097217-15097274)
chr7 (111-175)||(46681329-46681394)
chr7 (110-198)||(49151512-49151601)
chr7 (110-198)||(49158202-49158291)
chr7 (3-55)||(12555305-12555357)
chr7 (3-55)||(16184712-16184764)
chr7 (110-181)||(19463600-19463672)
chr7 (110-177)||(37288391-37288459)
chr7 (124-176)||(46650643-46650695)
chr7 (110-176)||(2025403-2025470)
chr7 (13-60)||(37380764-37380811)
chr7 (4-43)||(46348022-46348061)
chr7 (1-43)||(13020533-13020575)
chr7 (141-183)||(16069629-16069671)
chr7 (110-175)||(23521905-23521971)
chr7 (111-196)||(40922081-40922167)
chr7 (76-137)||(12695528-12695588)
chr7 (123-176)||(14945109-14945162)
chr7 (123-176)||(15372702-15372755)
chr7 (110-175)||(37243446-37243511)
chr7 (115-179)||(42059483-42059548)
chr7 (3-60)||(46681445-46681502)
chr7 (110-177)||(2387759-2387827)
chr7 (124-184)||(4281121-4281181)
chr7 (13-49)||(12462355-12462391)
chr7 (3-43)||(13026742-13026782)
chr7 (110-177)||(13452979-13453047)
chr7 (110-177)||(21758218-21758286)
chr7 (3-55)||(35961990-35962042)
chr7 (3-35)||(42059382-42059414)
chr7 (163-203)||(46626004-46626044)
chr7 (124-196)||(49159703-49159775)
[»] scaffold0001 (4 HSPs)
scaffold0001 (3-262)||(448712-448981)
scaffold0001 (115-196)||(179918-179999)
scaffold0001 (110-177)||(511753-511821)
scaffold0001 (3-66)||(96712-96775)
[»] scaffold0261 (1 HSPs)
scaffold0261 (15-259)||(8324-8577)
[»] scaffold0924 (1 HSPs)
scaffold0924 (3-262)||(3105-3374)
[»] scaffold0661 (1 HSPs)
scaffold0661 (3-258)||(3111-3376)
[»] chr4 (60 HSPs)
chr4 (3-258)||(18272130-18272394)
chr4 (111-240)||(10783366-10783496)
chr4 (117-227)||(15359920-15360031)
chr4 (111-240)||(10972017-10972147)
chr4 (3-227)||(17177210-17177434)
chr4 (116-227)||(16228216-16228327)
chr4 (116-196)||(53904473-53904553)
chr4 (115-196)||(33222220-33222302)
chr4 (3-196)||(30239887-30240079)
chr4 (111-183)||(14991765-14991837)
chr4 (115-219)||(16485623-16485727)
chr4 (110-212)||(7360119-7360222)
chr4 (3-183)||(15004273-15004452)
chr4 (110-176)||(21882464-21882531)
chr4 (1-55)||(10783542-10783596)
chr4 (110-177)||(900467-900535)
chr4 (124-184)||(16157792-16157852)
chr4 (110-177)||(42221303-42221371)
chr4 (110-181)||(49051918-49051990)
chr4 (110-176)||(14063677-14063744)
chr4 (115-177)||(30397027-30397090)
chr4 (1-55)||(10972193-10972247)
chr4 (126-184)||(19127475-19127533)
chr4 (115-176)||(33097972-33098034)
chr4 (85-176)||(13480151-13480241)
chr4 (110-185)||(18165424-18165500)
chr4 (110-196)||(3259114-3259201)
chr4 (110-176)||(37882369-37882435)
chr4 (110-212)||(52501422-52501525)
chr4 (110-176)||(3265763-3265829)
chr4 (115-196)||(29381886-29381968)
chr4 (110-176)||(49239988-49240054)
chr4 (110-176)||(49748702-49748768)
chr4 (110-184)||(50083092-50083166)
chr4 (215-248)||(14991690-14991723)
chr4 (211-248)||(15004198-15004235)
chr4 (110-198)||(26396559-26396648)
chr4 (152-196)||(5939841-5939885)
chr4 (3-43)||(13454594-13454634)
chr4 (89-176)||(45958885-45958971)
chr4 (89-176)||(54825316-54825402)
chr4 (111-181)||(13454691-13454762)
chr4 (115-177)||(20890245-20890308)
chr4 (110-176)||(23435122-23435189)
chr4 (110-227)||(39265350-39265469)
chr4 (225-259)||(634812-634846)
chr4 (111-176)||(11938045-11938111)
chr4 (1-55)||(15325737-15325791)
chr4 (3-60)||(16485511-16485568)
chr4 (3-36)||(20890143-20890176)
chr4 (3-36)||(20895770-20895803)
chr4 (123-176)||(26076910-26076963)
chr4 (3-36)||(31665826-31665859)
chr4 (3-36)||(42955317-42955350)
chr4 (110-177)||(1584781-1584849)
chr4 (110-173)||(15325835-15325899)
chr4 (3-55)||(16999420-16999472)
chr4 (3-51)||(18165548-18165596)
chr4 (3-43)||(42221208-42221248)
chr4 (3-43)||(47870326-47870366)
[»] scaffold0102 (4 HSPs)
scaffold0102 (111-259)||(30780-30927)
scaffold0102 (116-249)||(45450-45593)
scaffold0102 (3-60)||(30673-30730)
scaffold0102 (152-196)||(11451-11495)
[»] scaffold0193 (1 HSPs)
scaffold0193 (116-259)||(1981-2134)
[»] scaffold0149 (1 HSPs)
scaffold0149 (3-259)||(14017-14272)
[»] scaffold0017 (1 HSPs)
scaffold0017 (3-240)||(2039-2277)
[»] chr5 (61 HSPs)
chr5 (1-183)||(25014419-25014601)
chr5 (115-227)||(7772764-7772877)
chr5 (116-196)||(428158-428238)
chr5 (3-177)||(23443370-23443544)
chr5 (3-183)||(15193131-15193311)
chr5 (111-183)||(21889529-21889601)
chr5 (3-183)||(18819745-18819923)
chr5 (111-240)||(21830469-21830601)
chr5 (115-196)||(19363502-19363583)
chr5 (116-185)||(20844004-20844073)
chr5 (110-177)||(23544028-23544096)
chr5 (110-176)||(19799040-19799106)
chr5 (124-215)||(22501865-22501956)
chr5 (115-177)||(25420749-25420812)
chr5 (110-196)||(30781939-30782026)
chr5 (115-176)||(23075459-23075521)
chr5 (115-176)||(23081172-23081234)
chr5 (133-227)||(28259044-28259138)
chr5 (1-54)||(6403759-6403812)
chr5 (124-196)||(598148-598220)
chr5 (110-177)||(18567462-18567530)
chr5 (110-177)||(18940382-18940450)
chr5 (124-184)||(22006880-22006940)
chr5 (124-196)||(22508446-22508518)
chr5 (110-185)||(23560732-23560808)
chr5 (124-176)||(27635023-27635075)
chr5 (110-184)||(5455361-5455436)
chr5 (110-196)||(14881462-14881549)
chr5 (110-196)||(14888139-14888226)
chr5 (110-196)||(19509040-19509127)
chr5 (115-177)||(24058523-24058586)
chr5 (110-184)||(10687018-10687092)
chr5 (115-176)||(16774222-16774284)
chr5 (115-196)||(25847214-25847296)
chr5 (115-196)||(25853795-25853877)
chr5 (117-185)||(30344697-30344767)
chr5 (110-181)||(5337518-5337590)
chr5 (3-43)||(7772938-7772978)
chr5 (3-43)||(20991127-20991167)
chr5 (125-177)||(39608038-39608090)
chr5 (110-196)||(22247386-22247473)
chr5 (110-184)||(24008926-24009001)
chr5 (110-176)||(33536967-33537034)
chr5 (115-176)||(20991228-20991290)
chr5 (117-181)||(24668156-24668222)
chr5 (117-181)||(24736751-24736817)
chr5 (117-181)||(24737925-24737991)
chr5 (117-181)||(24750694-24750760)
chr5 (1-43)||(27635146-27635188)
chr5 (110-176)||(43029915-43029981)
chr5 (115-179)||(17938047-17938112)
chr5 (111-183)||(21495838-21495910)
chr5 (3-36)||(22501754-22501787)
chr5 (3-36)||(22508335-22508368)
chr5 (3-36)||(29745892-29745925)
chr5 (110-177)||(15462344-15462412)
chr5 (3-43)||(19801188-19801228)
chr5 (110-177)||(20341411-20341479)
chr5 (110-177)||(20348015-20348083)
chr5 (3-43)||(25420647-25420687)
chr5 (124-176)||(29745762-29745814)
[»] chr2 (32 HSPs)
chr2 (112-258)||(19036456-19036613)
chr2 (111-241)||(8889040-8889172)
chr2 (3-227)||(25106554-25106779)
chr2 (1-196)||(20648940-20649135)
chr2 (3-77)||(23753654-23753729)
chr2 (3-187)||(25268068-25268252)
chr2 (116-183)||(20913463-20913530)
chr2 (110-212)||(22012242-22012345)
chr2 (111-176)||(23291897-23291963)
chr2 (111-176)||(23333537-23333603)
chr2 (111-227)||(22860941-22861058)
chr2 (110-194)||(35243683-35243768)
chr2 (141-185)||(25174862-25174906)
chr2 (110-181)||(32910624-32910696)
chr2 (110-176)||(22812954-22813021)
chr2 (110-196)||(23887512-23887599)
chr2 (115-176)||(14564760-14564822)
chr2 (115-184)||(17582617-17582687)
chr2 (3-68)||(22860834-22860900)
chr2 (110-177)||(15642437-15642505)
chr2 (125-181)||(19648688-19648744)
chr2 (110-177)||(20851116-20851184)
chr2 (124-176)||(28970416-28970468)
chr2 (110-196)||(21605670-21605757)
chr2 (110-176)||(27038168-27038235)
chr2 (115-177)||(30195652-30195715)
chr2 (3-60)||(8889222-8889279)
chr2 (3-36)||(27272979-27273012)
chr2 (124-181)||(45029344-45029401)
chr2 (3-43)||(19648816-19648856)
chr2 (124-176)||(27366549-27366601)
chr2 (3-43)||(28970539-28970579)
[»] chr1 (52 HSPs)
chr1 (111-240)||(21699070-21699200)
chr1 (3-259)||(19336630-19336897)
chr1 (3-183)||(31926445-31926626)
chr1 (111-187)||(21409804-21409881)
chr1 (3-259)||(30490493-30490758)
chr1 (116-227)||(11140204-11140315)
chr1 (118-192)||(20850006-20850080)
chr1 (111-181)||(23713167-23713237)
chr1 (115-196)||(36615856-36615937)
chr1 (115-196)||(43089307-43089388)
chr1 (110-227)||(21921717-21921835)
chr1 (110-215)||(29601378-29601484)
chr1 (116-185)||(15315644-15315713)
chr1 (111-196)||(23634484-23634569)
chr1 (3-78)||(16882789-16882864)
chr1 (115-184)||(36918047-36918117)
chr1 (110-184)||(20076062-20076137)
chr1 (110-176)||(24080514-24080580)
chr1 (115-177)||(24237556-24237619)
chr1 (110-196)||(48428776-48428863)
chr1 (89-182)||(21963911-21964003)
chr1 (3-60)||(21409931-21409988)
chr1 (124-177)||(47485046-47485099)
chr1 (110-177)||(20293601-20293669)
chr1 (110-177)||(20300232-20300300)
chr1 (1-49)||(24108277-24108325)
chr1 (110-196)||(19045407-19045494)
chr1 (110-176)||(29553597-29553664)
chr1 (115-196)||(20396022-20396104)
chr1 (3-68)||(20849891-20849957)
chr1 (117-185)||(23194506-23194576)
chr1 (110-176)||(31534426-31534492)
chr1 (110-176)||(31563143-31563209)
chr1 (110-184)||(36211168-36211242)
chr1 (114-179)||(49328959-49329025)
chr1 (3-43)||(19860021-19860061)
chr1 (110-177)||(20571666-20571734)
chr1 (7-55)||(21665033-21665081)
chr1 (3-227)||(21733507-21733731)
chr1 (110-177)||(29150361-29150429)
chr1 (110-196)||(18419050-18419137)
chr1 (110-176)||(39188802-39188869)
chr1 (110-176)||(6741442-6741508)
chr1 (111-176)||(37676331-37676397)
chr1 (111-176)||(37683002-37683068)
chr1 (3-49)||(47484935-47484981)
chr1 (111-183)||(5381600-5381672)
chr1 (128-177)||(9292621-9292670)
chr1 (7-43)||(19853890-19853926)
chr1 (124-176)||(20837363-20837415)
chr1 (3-43)||(21735990-21736030)
chr1 (3-55)||(23065937-23065989)
[»] scaffold0555 (3 HSPs)
scaffold0555 (111-248)||(2348-2485)
scaffold0555 (110-184)||(96-171)
scaffold0555 (6-78)||(2243-2317)
[»] scaffold0516 (3 HSPs)
scaffold0516 (111-219)||(7111-7220)
scaffold0516 (5-56)||(7015-7066)
scaffold0516 (211-259)||(7222-7267)
[»] scaffold0205 (1 HSPs)
scaffold0205 (3-240)||(28104-28343)
[»] scaffold0025 (2 HSPs)
scaffold0025 (3-240)||(77584-77823)
scaffold0025 (124-176)||(72063-72115)
[»] scaffold0096 (1 HSPs)
scaffold0096 (116-227)||(3842-3953)
[»] scaffold0402 (1 HSPs)
scaffold0402 (3-259)||(15790-16057)
[»] scaffold1290 (1 HSPs)
scaffold1290 (3-183)||(401-581)
[»] scaffold0434 (1 HSPs)
scaffold0434 (3-249)||(407-663)
[»] chr6 (36 HSPs)
chr6 (125-227)||(18787060-18787162)
chr6 (116-259)||(24721566-24721707)
chr6 (111-248)||(22797586-22797723)
chr6 (110-227)||(10469844-10469962)
chr6 (110-227)||(13127392-13127510)
chr6 (111-183)||(18315109-18315181)
chr6 (115-215)||(23020487-23020588)
chr6 (110-176)||(14615432-14615499)
chr6 (3-184)||(19468689-19468870)
chr6 (111-219)||(23232522-23232631)
chr6 (110-176)||(27768281-27768348)
chr6 (124-185)||(10582547-10582608)
chr6 (124-227)||(1071601-1071705)
chr6 (110-181)||(13941354-13941426)
chr6 (3-55)||(14132299-14132351)
chr6 (110-184)||(24363488-24363563)
chr6 (110-184)||(24370079-24370154)
chr6 (110-176)||(29926618-29926685)
chr6 (110-176)||(25464764-25464830)
chr6 (110-176)||(19587731-19587799)
chr6 (76-137)||(23106131-23106191)
chr6 (3-78)||(22797755-22797831)
chr6 (3-43)||(23234199-23234239)
chr6 (111-185)||(5289070-5289145)
chr6 (125-176)||(14374519-14374570)
chr6 (110-196)||(15331258-15331345)
chr6 (110-196)||(17310588-17310675)
chr6 (3-38)||(17414861-17414896)
chr6 (115-176)||(17206903-17206964)
chr6 (5-55)||(19819742-19819792)
chr6 (110-179)||(26417809-26417879)
chr6 (110-176)||(33875876-33875942)
chr6 (115-179)||(34133120-34133185)
chr6 (13-49)||(13127558-13127594)
chr6 (3-55)||(19587844-19587896)
chr6 (124-176)||(24563440-24563492)
[»] scaffold0556 (1 HSPs)
scaffold0556 (6-223)||(4098-4315)
[»] scaffold0326 (2 HSPs)
scaffold0326 (3-196)||(4510-4702)
scaffold0326 (3-196)||(19692-19884)
[»] scaffold0173 (1 HSPs)
scaffold0173 (123-227)||(2266-2370)
[»] scaffold0244 (2 HSPs)
scaffold0244 (76-183)||(731-837)
scaffold0244 (3-183)||(14467-14646)
[»] scaffold0310 (2 HSPs)
scaffold0310 (115-227)||(17002-17115)
scaffold0310 (3-43)||(16901-16941)
[»] scaffold0091 (2 HSPs)
scaffold0091 (111-259)||(21820-21978)
scaffold0091 (111-259)||(26017-26175)
[»] scaffold0108 (1 HSPs)
scaffold0108 (111-259)||(46476-46629)
[»] scaffold0011 (6 HSPs)
scaffold0011 (3-243)||(55847-56088)
scaffold0011 (3-78)||(187072-187148)
scaffold0011 (3-78)||(196699-196775)
scaffold0011 (3-78)||(147809-147885)
scaffold0011 (3-223)||(154996-155217)
scaffold0011 (126-223)||(147933-148030)
[»] scaffold0923 (1 HSPs)
scaffold0923 (110-196)||(785-872)
[»] scaffold0331 (1 HSPs)
scaffold0331 (116-227)||(19465-19576)
[»] scaffold0022 (5 HSPs)
scaffold0022 (110-219)||(37773-37884)
scaffold0022 (110-219)||(135834-135945)
scaffold0022 (89-181)||(105192-105283)
scaffold0022 (3-55)||(37929-37981)
scaffold0022 (3-55)||(135989-136041)
[»] scaffold0050 (1 HSPs)
scaffold0050 (3-196)||(13673-13866)
[»] scaffold0751 (1 HSPs)
scaffold0751 (116-196)||(1372-1451)
[»] scaffold0054 (2 HSPs)
scaffold0054 (111-183)||(59586-59658)
scaffold0054 (111-183)||(61150-61221)
[»] scaffold0002 (1 HSPs)
scaffold0002 (3-78)||(371241-371317)
[»] scaffold0211 (2 HSPs)
scaffold0211 (111-185)||(10334-10409)
scaffold0211 (1-60)||(10197-10256)
[»] scaffold0104 (2 HSPs)
scaffold0104 (116-181)||(26990-27055)
scaffold0104 (116-181)||(28372-28437)
[»] scaffold0007 (2 HSPs)
scaffold0007 (111-196)||(206852-206936)
scaffold0007 (1-78)||(206968-207046)
[»] scaffold0191 (1 HSPs)
scaffold0191 (110-177)||(10676-10744)
[»] scaffold0167 (1 HSPs)
scaffold0167 (3-78)||(7783-7859)
[»] scaffold0034 (4 HSPs)
scaffold0034 (110-181)||(9252-9324)
scaffold0034 (110-181)||(14816-14888)
scaffold0034 (3-49)||(9374-9420)
scaffold0034 (2-49)||(14938-14985)
[»] scaffold0009 (2 HSPs)
scaffold0009 (110-177)||(254446-254514)
scaffold0009 (110-177)||(247934-248002)
[»] scaffold0004 (2 HSPs)
scaffold0004 (110-176)||(322025-322092)
scaffold0004 (110-173)||(327713-327777)
[»] scaffold0947 (1 HSPs)
scaffold0947 (3-196)||(3331-3524)
[»] scaffold0114 (1 HSPs)
scaffold0114 (3-196)||(46980-47173)
[»] scaffold0093 (3 HSPs)
scaffold0093 (115-176)||(25576-25638)
scaffold0093 (115-176)||(36244-36306)
scaffold0093 (115-176)||(42651-42713)
[»] scaffold1853 (1 HSPs)
scaffold1853 (1-166)||(1-166)
[»] scaffold0154 (1 HSPs)
scaffold0154 (109-185)||(17579-17656)
[»] scaffold0088 (1 HSPs)
scaffold0088 (123-227)||(32510-32615)
[»] scaffold0334 (1 HSPs)
scaffold0334 (110-185)||(9409-9485)
[»] scaffold0035 (1 HSPs)
scaffold0035 (110-185)||(1494-1570)
[»] scaffold0574 (1 HSPs)
scaffold0574 (111-181)||(5047-5118)
[»] scaffold0523 (1 HSPs)
scaffold0523 (110-196)||(6867-6954)
[»] scaffold0078 (1 HSPs)
scaffold0078 (110-196)||(16566-16653)
[»] scaffold0076 (2 HSPs)
scaffold0076 (110-176)||(982-1049)
scaffold0076 (9-49)||(893-933)
[»] scaffold0053 (1 HSPs)
scaffold0053 (3-137)||(45915-46048)
[»] scaffold0015 (1 HSPs)
scaffold0015 (110-176)||(170961-171028)
[»] scaffold0560 (1 HSPs)
scaffold0560 (123-227)||(136-241)
[»] scaffold0342 (1 HSPs)
scaffold0342 (124-177)||(16020-16073)
[»] scaffold0299 (1 HSPs)
scaffold0299 (124-173)||(3297-3346)
[»] scaffold0037 (1 HSPs)
scaffold0037 (124-185)||(45309-45370)
[»] scaffold0301 (2 HSPs)
scaffold0301 (125-185)||(4188-4248)
scaffold0301 (3-43)||(12688-12728)
[»] scaffold0139 (1 HSPs)
scaffold0139 (3-55)||(26743-26795)
[»] scaffold0126 (2 HSPs)
scaffold0126 (124-176)||(45176-45228)
scaffold0126 (220-249)||(45283-45312)
[»] scaffold0031 (2 HSPs)
scaffold0031 (211-259)||(122003-122050)
scaffold0031 (211-259)||(132879-132926)
[»] scaffold0323 (2 HSPs)
scaffold0323 (110-176)||(8208-8275)
scaffold0323 (3-55)||(8112-8164)
[»] scaffold0019 (1 HSPs)
scaffold0019 (115-177)||(138006-138069)
[»] scaffold0003 (1 HSPs)
scaffold0003 (115-176)||(160663-160724)
[»] scaffold0266 (1 HSPs)
scaffold0266 (111-183)||(23967-24039)
[»] scaffold0214 (1 HSPs)
scaffold0214 (124-177)||(14388-14441)
[»] scaffold1584 (2 HSPs)
scaffold1584 (3-43)||(1185-1225)
scaffold1584 (125-181)||(1297-1353)
[»] scaffold0443 (1 HSPs)
scaffold0443 (110-177)||(14332-14400)
[»] scaffold0243 (1 HSPs)
scaffold0243 (124-176)||(11473-11525)
[»] scaffold0156 (1 HSPs)
scaffold0156 (110-185)||(26549-26624)
[»] scaffold0118 (1 HSPs)
scaffold0118 (110-177)||(8087-8155)
[»] scaffold0297 (1 HSPs)
scaffold0297 (110-242)||(844-978)
[»] scaffold0124 (2 HSPs)
scaffold0124 (3-38)||(10097-10132)
scaffold0124 (208-238)||(15911-15941)
[»] scaffold0121 (1 HSPs)
scaffold0121 (3-38)||(10107-10142)
[»] scaffold0113 (1 HSPs)
scaffold0113 (111-185)||(26767-26842)
[»] scaffold0074 (2 HSPs)
scaffold0074 (110-176)||(21131-21198)
scaffold0074 (3-43)||(21035-21075)
[»] scaffold0377 (2 HSPs)
scaffold0377 (3-49)||(4055-4101)
scaffold0377 (3-49)||(8094-8140)
[»] scaffold0089 (1 HSPs)
scaffold0089 (110-176)||(17694-17760)
[»] scaffold0081 (1 HSPs)
scaffold0081 (3-68)||(55190-55256)
[»] scaffold0041 (1 HSPs)
scaffold0041 (111-196)||(50928-51014)
[»] scaffold0405 (2 HSPs)
scaffold0405 (111-179)||(2455-2524)
scaffold0405 (111-179)||(11163-11232)
[»] scaffold0155 (1 HSPs)
scaffold0155 (3-48)||(31651-31696)
[»] scaffold0026 (1 HSPs)
scaffold0026 (111-183)||(36534-36606)


Alignment Details
Target: chr3 (Bit Score: 178; Significance: 5e-96; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 3 - 265
Target Start/End: Original strand, 14570661 - 14570932
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcaccaaaaaccaagaattcaaaacctaacccaatttcccaatttt 102  Q
    |||||||| |||||||||||||||| || |||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||||||||    
T  14570661 tgtatgcaatcagaacctatttctaacaccaaaacaacaatatctacacccaattcaccaaaaactaagaattcaaagcctaacccaaattcccaatttt 14570760  T
Q  103 catctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaat 202  Q
    |||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  14570761 catccagaaa-cctgttaaaccaaaatcagaattcaatatctattctactgaagcaaacctcacccttaccttaattcagaaggacaaatgcaccggaat 14570859  T
Q  203 tggattct----------cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaagcaatt 265  Q
    || |||||          ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14570860 tgaattctcttggctctacttggctcttctcccttttcttccaaaacttgtctgtttgcacgtaaaagcaatt 14570932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 3 - 258
Target Start/End: Complemental strand, 15954274 - 15954020
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaacc-aagaattcaaaacctaacccaatttcccaatt 100  Q
    ||||||||  ||||||||||||||| ||||||||||| ||| ||| |||||||||||| |||||||| || ||| ||| |   | ||||| | |||||||    
T  15954274 tgtatgcaaccagaacctatttctaacatcaaaacaataatctctgcactcaattcactcaaaaacccaataatccaacataaaccccaaatccccaatt 15954175  T
Q  101 ttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccgga 200  Q
    |  | |    |||| ||||||| ||||||||||||| || |||||| |||||||||||||| ||||||||||||||||||||| | | ||||||||   |    
T  15954174 tctaccat--aaacttgttaaatcaaaatcagaattcaacatctatactactgaagcaaacctcacccttaccttaattcagacgaacaaatgcacataa 15954077  T
Q  201 attggattctcttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaa 258  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15954076 attggattcacttggctcttctcccttttctcccaaaacttgtctgttt-cacgtaaa 15954020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 111 - 258
Target Start/End: Complemental strand, 15934161 - 15934015
Alignment:
Q  111 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattct 210  Q
    |||| ||||||| ||||||||||||| || |||||| |||||||||||||| ||||||||||||||||||||| | | ||||||||   ||||||||||     
T  15934161 aaacttgttaaatcaaaatcagaattcaacatctatactactgaagcaaacctcacccttaccttaattcagacgaacaaatgcacataaattggattca 15934062  T
Q  211 cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaa 258  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||    
T  15934061 cttggctcttctcccttttctctcaaaacttgtctgttt-cacgtaaa 15934015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 152 - 227
Target Start/End: Original strand, 12203286 - 12203361
Alignment:
Q  152 tgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctcttggctcttctccctt 227  Q
    |||||||||| |||| |||||||||||||||||||| ||||||||   ||||||||||||||||||||||||||||    
T  12203286 tgaagcaaacctcacgcttaccttaattcagaaggaaaaatgcacatcaattggattctcttggctcttctccctt 12203361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 194
Target Start/End: Complemental strand, 11644129 - 11643937
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaaaacctaaccc-aatttcccaatt 100  Q
    ||||||||||||||||||||||||| ||||| |||| |||| ||||||||||| ||| ||||||||| ||||||||| |   | ||| || ||| |||||    
T  11644129 tgtatgcactcagaacctatttctaacatcagaacagcaatctctacactcaaatcacccaaaaacctagaattcaacataaaccccaaaattctcaatt 11644030  T
Q  101 ttcatctagaaaacctgtt--aaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgc 194  Q
     | |  |   |||||||||  ||| ||||||||||||| || | ||||  ||||||||||||| |||||||||||||||||||||| || ||||||    
T  11644029 ctaacat---aaacctgttaaaaatcaaaatcagaattcaacaactatattactgaagcaaacctcacccttaccttaattcagaaagaaaaatgc 11643937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 17497039 - 17497232
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaaaacctaaccc-aatttcccaatt 100  Q
    ||||||||||||||||||||||||  ||||| ||||||||| ||||||||||| ||| ||||||||| ||||||| | |   | ||| || |||||||||    
T  17497039 tgtatgcactcagaacctatttctgtcatcagaacaacaatctctacactcaaatcacccaaaaacctagaattcgacataaaccccaaaattcccaatt 17497138  T
Q  101 ttcatctagaaaacctgtt-aaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
     | |  |   ||||||||| ||| |||||||| |||| || | ||||  ||||||||||||| |||||||||||||||||||||| || ||||||||    
T  17497139 ctaacat---aaacctgttaaaatcaaaatcaaaattcaacaactatattactgaagcaaacctcacccttaccttaattcagaaagacaaatgcac 17497232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 227
Target Start/End: Original strand, 29551840 - 29551958
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 208  Q
    |||||||||||||| | || ||||||||| |||||||| ||||||||| |||  |||||||||||||||||||||| || ||||||||   ||||| |||    
T  29551840 aaaacctgttaaactccaattcagaatttcatatctatactactgaagtaaaactcacccttaccttaattcagaatgaaaaatgcacaacaattgaatt 29551939  T
Q  209 ctcttggctcttctccctt 227  Q
    ||||||  |||||||||||    
T  29551940 ctcttgattcttctccctt 29551958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 227
Target Start/End: Complemental strand, 46070354 - 46070237
Alignment:
Q  111 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattc 209  Q
    ||||||||||||| | || ||||||||| |||||||| ||||||||| |||  |||| ||||||||||||||||| || |||||||| | || |||||||    
T  46070354 aaacctgttaaactccaattcagaatttcatatctatactactgaagtaaaactcactcttaccttaattcagaatgaaaaatgcacagcaaatggattc 46070255  T
Q  210 tcttggctcttctccctt 227  Q
    |||||| ||| |||||||    
T  46070254 tcttggttctcctccctt 46070237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 219
Target Start/End: Original strand, 12275120 - 12275340
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaacc-aagaattcaaaacctaacccaatttcccaatt 100  Q
    ||||||||  ||||||||||||||| ||||||||||  ||| |||||||||||||||| |||||||| || ||||||| |   | |||||  |||| | |    
T  12275120 tgtatgcaaccagaacctatttctaacatcaaaacagtaatctctacactcaattcactcaaaaacccaataattcaacataaaccccaaaatccccaat 12275219  T
Q  101 ttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaa---acttcacccttaccttaattcagaaggagaaatgcacc 197  Q
    | |  | | | ||||||||||||||||||||||||  || |||||| ||||||||||||   || ||||||||||||||||||| | | | ||||||||     
T  12275220 tcctacca-ataacctgttaaaccaaaatcagaatcaaacatctatactactgaagcaaaccacctcacccttaccttaattcaaatgaacaaatgcaca 12275318  T
Q  198 ggaattggattctcttggctct 219  Q
    | ||| |||||| |||||||||    
T  12275319 gaaatcggattcacttggctct 12275340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 12536940 - 12536869
Alignment:
Q  116 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaagga 187  Q
    ||||||||||||||||||||| |||| |||  ||| |||||||||| |||||||||||||||||||||||||    
T  12536940 tgttaaaccaaaatcagaattcaataactacactattgaagcaaacctcacccttaccttaattcagaagga 12536869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 176
Target Start/End: Original strand, 15519328 - 15519501
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaaaacctaaccc-aatttcccaatt 100  Q
    |||||||||||| |||||||||||| ||||| |||||||||  |||||||||||||| ||||||||| ||||||||| |   | ||| || |||||||||    
T  15519328 tgtatgcactcataacctatttctaacatcagaacaacaattcctacactcaattcacccaaaaacctagaattcaacataaaccccaaaattcccaatt 15519427  T
Q  101 ttcatctagaaaacctgtt-aaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
     |||  |   ||||||||| ||| |||||||||||||||  | |||  ||| |||||||||| ||||||||||||||    
T  15519428 ctcacat---aaacctgttaaaatcaaaatcagaatttatcaactacactattgaagcaaacctcacccttacctta 15519501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 115 - 227
Target Start/End: Complemental strand, 9690707 - 9690594
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctctt 213  Q
    ||||||||| ||||||||||| |||| |||||  ||||||||| |||  |||| ||||||||||||||||| || ||||||||   || |||||||||||    
T  9690707 ctgttaaactcaaaatcagaaattaacatctacactactgaagtaaatctcactcttaccttaattcagaatgaaaaatgcacatcaaatggattctctt 9690608  T
Q  214 ggctcttctccctt 227  Q
    || |||||||||||    
T  9690607 ggttcttctccctt 9690594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 12153829 - 12153898
Alignment:
Q  116 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 185  Q
    |||||||||||||||||| || |||| |||| ||||||| |||||| |||||||||||||||||||||||    
T  12153829 tgttaaaccaaaatcagagttcaataactatactactgaggcaaacctcacccttaccttaattcagaag 12153898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 13692888 - 13692975
Alignment:
Q  110 aaaacctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||||| ||||||||| |||||||||||| | || | || ||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  13692888 aaaacttgttaaacccaaaatcagaattcattaaccatactattgaagcaaacctcacccttaccttaattcagaaggaaaaatgcac 13692975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 20376487 - 20376381
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 208  Q
    |||||||||||||| | || ||||||||| ||| |||| ||||||||| |||  |||||||||| ||||||||||| || |||||||| | || ||||||    
T  20376487 aaaacctgttaaactccaattcagaatttcataactatactactgaagtaaaactcacccttacattaattcagaatgaaaaatgcacagcaaatggatt 20376388  T
Q  209 ctcttgg 215  Q
    |||||||    
T  20376387 ctcttgg 20376381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 2498287 - 2498200
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||||||||||||| |||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||| ||||||| || ||||||||    
T  2498287 aaaacctgttaaactcaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttagttcagaatgaaaaatgcac 2498200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 11963388 - 11963325
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    ||||||||| ||||||||||| |||| |||||| |||||||||||||| |||||||||||||||    
T  11963388 ctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttaccttaa 11963325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 54090979 - 54090912
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||| ||||||||||| |||| |||||| ||||||||| |||| ||||||||||||||    
T  54090979 aaaacctgttaaactcaaaatcagaaattaaaatctatactactgaagtaaacctcacccttacctta 54090912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 49164073 - 49164142
Alignment:
Q  110 aaaacctgttaaac--caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    ||||||||||||||  ||||||||||  |||| |||||| |||||||||||||| |||||||||||||||    
T  49164073 aaaacctgttaaacatcaaaatcagagattaacatctatactactgaagcaaacctcacccttaccttaa 49164142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 196
Target Start/End: Complemental strand, 54832448 - 54832366
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||||||||| |||||||||||||||| |||||  ||| ||||| |||| ||||||||||||||||||| || || ||||||||    
T  54832448 ctgttaaacacaaaatcagaatttaaaatctacactattgaagtaaacctcacccttaccttaattcaaaatgaaaaatgcac 54832366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 10596897 - 10596825
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 181  Q
    |||||||||||||  ||||||||||||  ||||||||| ||||||||| |||  |||||||||||||||||||    
T  10596897 aaaacctgttaaaatcaaaatcagaatccaatatctatactactgaagtaaaactcacccttaccttaattca 10596825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 12355344 - 12355292
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 55  Q
    ||||||||||||||||||||||||| ||||| |||||||||  ||||||||||    
T  12355344 tgtatgcactcagaacctatttctaacatcagaacaacaattgctacactcaa 12355292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 12361843 - 12361791
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 55  Q
    ||||||||||||||||||||||||| ||||| |||||||||  ||||||||||    
T  12361843 tgtatgcactcagaacctatttctaacatcagaacaacaattcctacactcaa 12361791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 16823014 - 16822942
Alignment:
Q  111 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 183  Q
    |||||||||||| ||||||||||||  || || ||| ||| |||||||||| ||||| |||||||||||||||    
T  16823014 aaacctgttaaatcaaaatcagaataaaaaatgtatactattgaagcaaacctcaccattaccttaattcaga 16822942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 11955834 - 11955771
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    ||||||||| ||||||||||| |||| |||||| |||||||||||||| ||||| |||||||||    
T  11955834 ctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacctttaccttaa 11955771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 12724369 - 12724306
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    ||||||||| |||| |||||| ||||| ||||| |||||||||||||| |||||||||||||||    
T  12724369 ctgttaaactcaaattcagaaattaatctctatactactgaagcaaacctcacccttaccttaa 12724306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 18718364 - 18718297
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||  ||||||||||| | |||| |||| |||||||||||||| ||||||||||||||    
T  18718364 aaaacctgttaaattcaaaatcagaactcaataactatactactgaagcaaacctcacccttacctta 18718297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 18756178 - 18756107
Alignment:
Q  110 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 181  Q
    ||||||||||||||  ||||||||||| |||| |||| ||||| ||| |||  |||||||||||||||||||    
T  18756178 aaaacctgttaaactcaaatcagaattcaatacctatactactaaagtaaaagtcacccttaccttaattca 18756107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 20188707 - 20188782
Alignment:
Q  111 aaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 185  Q
    |||||||||||| |||||||||||||| |||| ||||  |||||||  |||  |||||||||||||||||||||||    
T  20188707 aaacctgttaaatccaaaatcagaattcaataactatattactgaaataaatctcacccttaccttaattcagaag 20188782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 28759775 - 28759850
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 184  Q
    |||||||||||||| |||||||||| |||||  ||||| ||| ||||| ||||  |||||||||||||||||||||    
T  28759775 aaaacctgttaaactcaaaatcagactttaaattctatactattgaagtaaaccccacccttaccttaattcagaa 28759850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 15375557 - 15375619
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||| |||||| |||| |||||| |||| |||||||||||||| ||||||||||||||    
T  15375557 ctgttaaactcaaaattagaaattaatagctatactactgaagcaaacctcacccttacctta 15375619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 16330853 - 16330791
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||| |||||||||||||||||| |||| |||||| ||||||| ||||| ||||||||    
T  16330853 ctgttaaacacaaaatcagaatttaatagctatactactggagcaaacctcaccattacctta 16330791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 245
Target Start/End: Complemental strand, 16822904 - 16822870
Alignment:
Q  211 cttggctcttctcccttttctcccaaaacttgtct 245  Q
    |||||||||||||||||||||||||||||||||||    
T  16822904 cttggctcttctcccttttctcccaaaacttgtct 16822870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 16834143 - 16834205
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||| ||||||||||| ||||||  ||| |||||||||||||| ||||||||||||||    
T  16834143 ctgttaaacacaaaatcagaaattaataattatactactgaagcaaacctcacccttacctta 16834205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 17197895 - 17197849
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctac 49  Q
    ||||||||||||||||||||||||| |||||||| |||||| |||||    
T  17197895 tgtatgcactcagaacctatttctaacatcaaaataacaatctctac 17197849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 17198361 - 17198315
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctac 49  Q
    ||||||||||||||||||||||||| |||||||| |||||| |||||    
T  17198361 tgtatgcactcagaacctatttctaacatcaaaataacaatctctac 17198315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 18961867 - 18961932
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctt 175  Q
    |||||||||||||| ||||||||||||| || |||||| ||| |||||||||| |||||||||||||    
T  18961867 aaaacctgttaaactcaaaatcagaatt-aacatctatactattgaagcaaacctcacccttacctt 18961932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 27034087 - 27034026
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||| ||||||||||||| |||| |||| |||||||||||||| ||||||||||||||    
T  27034087 ctgttaaacacaaaatcagaatt-aatagctatactactgaagcaaacctcacccttacctta 27034026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 8373161 - 8373089
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 181  Q
    |||||||||||||  ||||||||||| |||| || ||  |||||||||||||| |||||||||||| ||||||    
T  8373161 aaaacctgttaaattcaaaatcagaaattaacatttacactactgaagcaaacctcacccttacctgaattca 8373089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 12479018 - 12478966
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 55  Q
    |||||||||||| |||||||||||| ||||| |||||||||  ||||||||||    
T  12479018 tgtatgcactcaaaacctatttctaacatcagaacaacaattcctacactcaa 12478966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 177
Target Start/End: Complemental strand, 30596104 - 30596036
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||||||| ||||||||||| |||||| |||  ||| ||||| |||| |||||||||||||||    
T  30596104 aaaacctgttaaactcaaaatcagaaattaataactacactattgaagtaaacctcacccttaccttaa 30596036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 32387262 - 32387190
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 181  Q
    |||||||||||||| | || ||||||||| |||||||| ||||||||| |||   ||||||||||||||||||    
T  32387262 aaaacctgttaaactccaattcagaatttcatatctatactactgaagtaaaacccacccttaccttaattca 32387190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 11849663 - 11849588
Alignment:
Q  111 aaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 185  Q
    |||||||||||| |||||||| ||||| |||| ||||  ||||||| ||||  ||||||||||||||||| |||||    
T  11849663 aaacctgttaaatccaaaatccgaattcaataactatattactgaaacaaatctcacccttaccttaatttagaag 11849588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 11849760 - 11849713
Alignment:
Q  13 cagaacctatttctaccatcaaaacaacaatatctacactcaattcac 60  Q
    ||||||||| ||||||||||| |||| |||| ||||||||||||||||    
T  11849760 cagaacctaattctaccatcagaacatcaatttctacactcaattcac 11849713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 12256529 - 12256596
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||  ||||||||||| | |||| |||| |||||||||||||| ||||||||| ||||    
T  12256529 aaaacctgttaaattcaaaatcagaactcaataactatactactgaagcaaacctcacccttagctta 12256596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 13667250 - 13667203
Alignment:
Q  13 cagaacctatttctaccatcaaaacaacaatatctacactcaattcac 60  Q
    ||||||||| ||||||||||| |||| |||| ||||||||||||||||    
T  13667250 cagaacctaattctaccatcataacatcaatttctacactcaattcac 13667203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 21353092 - 21353167
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 184  Q
    |||||||||||||| |||| ||||| ||||| |||||  ||| ||||| |||| |||||||||||||| |||||||    
T  21353092 aaaacctgttaaactcaaattcagactttaaaatctacactattgaagtaaacctcacccttaccttagttcagaa 21353167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 50655251 - 50655164
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||||||||||||| |||||||||| |||||  ||||  ||| ||||| ||||  ||||||||||||| ||||||| || ||||||||    
T  50655251 aaaacctgttaaactcaaaatcagactttaaattctacactattgaagtaaaccccacccttaccttagttcagaatgaaaaatgcac 50655164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 51854341 - 51854278
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    ||||||||| |||||||||||||||| |||||  ||| ||||| |||| |||||||||||||||    
T  51854341 ctgttaaacacaaaatcagaatttaaaatctacactattgaagtaaacctcacccttaccttaa 51854278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 53570470 - 53570407
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    ||||||||| |||||||||||||||| |||||  ||| ||||| |||| |||||||||||||||    
T  53570470 ctgttaaacacaaaatcagaatttaaaatctacactattgaagtaaacctcacccttaccttaa 53570407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 6926857 - 6926795
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||| ||||||||||||| |||| |||  ||| ||||| |||||||||||||||||||    
T  6926857 ctgttaaacacaaaatcagaattcaataactacactattgaagtaaacttcacccttacctta 6926795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 219
Target Start/End: Complemental strand, 11304985 - 11304875
Alignment:
Q  111 aaacctgttaaac-caaaatcagaatttaat-atctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 208  Q
    ||||||||||||  ||||||||| ||||||  |||||  ||| ||||| |||| |||||||||||||||||||||| || |||||| |   | || ||||    
T  11304985 aaacctgttaaaatcaaaatcaggatttaaccatctacactattgaagtaaacctcacccttaccttaattcagaaagacaaatgctcaatagtttgatt 11304886  T
Q  209 ctcttggctct 219  Q
    |||||||||||    
T  11304885 ctcttggctct 11304875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 259
Target Start/End: Original strand, 12201293 - 12201327
Alignment:
Q  225 cttttctcccaaaacttgtctgtttgcacgtaaaa 259  Q
    ||||||||||||||||||||||||| |||||||||    
T  12201293 cttttctcccaaaacttgtctgttttcacgtaaaa 12201327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 227
Target Start/End: Complemental strand, 14288245 - 14288128
Alignment:
Q  111 aaacctgttaaaccaaaatcagaatttaatatctattctactga-agcaaacttcacccttaccttaattcagaaggagaaatgc-accggaattggatt 208  Q
    |||| |||||||||||||||||||||  | |||||| ||| ||| || |||| ||||||||||||||||||||| | | |||| | || | |||  | ||    
T  14288245 aaacatgttaaaccaaaatcagaattaca-atctatactattgagagtaaacctcacccttaccttaattcagatgaacaaattctacagaaatctgttt 14288147  T
Q  209 ctcttggctcttctccctt 227  Q
    |||||||||||||||||||    
T  14288146 ctcttggctcttctccctt 14288128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 14844407 - 14844321
Alignment:
Q  110 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||||||||||||  |||||||||| |||||  ||||  ||| ||||| ||||  ||||||||||||| ||||||| || ||||||||    
T  14844407 aaaacctgttaactcaaaatcagactttaaattctacactattgaagtaaaccccacccttaccttagttcagaatgaaaaatgcac 14844321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 16413520 - 16413450
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 184  Q
    ||||||||| ||||||||||| | |||| ||||  |||||||| |||| |||||||||||||| |||||||    
T  16413520 ctgttaaacacaaaatcagaaatcaataactatattactgaagtaaacctcacccttaccttagttcagaa 16413450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 12960616 - 12960548
Alignment:
Q  110 aaaacctgttaaacc--aaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||||||||   |||||||||||| |  |||||| ||| |||||||||| ||||||||||||||    
T  12960616 aaaacctgttaaactcaaaaatcagaattcagaatctatactaatgaagcaaacctcacccttacctta 12960548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 247
Target Start/End: Complemental strand, 13036106 - 13036069
Alignment:
Q  211 cttggctcttctccctttt-ctcccaaaacttgtctgt 247  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  13036106 cttggctcttctccctttttctcccaaaacttgtctgt 13036069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 18135652 - 18135607
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatcta 48  Q
    ||||||| ||||||||||||||||| ||||| ||||||||| ||||    
T  18135652 tgtatgcgctcagaacctatttctaacatcagaacaacaatctcta 18135607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 19343505 - 19343444
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctt 175  Q
    ||||||||| ||||||||||| |||||| |||  ||| |||||||||| |||||||||||||    
T  19343505 ctgttaaactcaaaatcagaaattaataactacactattgaagcaaacctcacccttacctt 19343444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 185
Target Start/End: Original strand, 11889254 - 11889282
Alignment:
Q  157 caaacttcacccttaccttaattcagaag 185  Q
    |||||||||||||||||||||||||||||    
T  11889254 caaacttcacccttaccttaattcagaag 11889282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 11964250 - 11964210
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaat 43  Q
    ||||||||||||||||||||||||| |||||  ||||||||    
T  11964250 tgtatgcactcagaacctatttctaacatcaggacaacaat 11964210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 12724471 - 12724431
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaat 43  Q
    ||||| ||||||||||||||||||| ||||| |||||||||    
T  12724471 tgtatacactcagaacctatttctaacatcagaacaacaat 12724431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 12960712 - 12960660
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 55  Q
    ||||||||  ||||||||||||||| ||||||||||||| | ||| |||||||    
T  12960712 tgtatgcaaccagaacctatttctaacatcaaaacaacagtctctgcactcaa 12960660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 18718460 - 18718420
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaat 43  Q
    |||||||||||| |||| ||||||| |||||||||||||||    
T  18718460 tgtatgcactcataacccatttctaacatcaaaacaacaat 18718420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 18961777 - 18961817
Alignment:
Q  9 cactcagaacctatttctaccatcaaaacaacaatatctac 49  Q
    ||||||||||||||||||| ||||| ||||||||| |||||    
T  18961777 cactcagaacctatttctaacatcagaacaacaatctctac 18961817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 153; Significance: 4e-81; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 3 - 260
Target Start/End: Original strand, 20007101 - 20007367
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcaccaaaaaccaagaattcaaaacctaacccaatttcccaatttt 102  Q
    ||||||||  ||||||||||||||| || ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20007101 tgtatgcaaccagaacctatttctaacaccaaaatagcaatatctacactcaattcaccaaaaaccaagaattcaaaacctaacccaaattcccaatttt 20007200  T
Q  103 catctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaat 202  Q
    |||| || ||||||||||||||||||| |||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||| | |||    
T  20007201 catccag-aaacctgttaaaccaaaattagaattcaatatctatactactgaagcaaacctcacccttaccttaattcagaaggacaaatgcacagaaat 20007299  T
Q  203 tggattctcttggctc----------ttctcccttttctcccaaaacttgtctgtttgcacgtaaaag 260  Q
    |||||| |||||||||          || |||||||||||||||||||||||| ||||||||||||||    
T  20007300 tggattatcttggctctacttggttgttttcccttttctcccaaaacttgtctatttgcacgtaaaag 20007367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 179
Target Start/End: Complemental strand, 14594062 - 14593885
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaaccaagaattcaaaacctaacccaatttcccaattt 101  Q
    ||||||||||||||||||||||||| |||||||| | |||| |||||||||||||||| ||||||||||  | || ||    ||||||||||||||||||    
T  14594062 tgtatgcactcagaacctatttctaacatcaaaaaagcaatctctacactcaattcactcaaaaaccaaataatccaacataaacccaatttcccaattt 14593963  T
Q  102 tcatctagaaaacctgttaaaccaa-aatcagaatttaatatctattctactg-aagcaaacttcacccttaccttaatt 179  Q
    ||||  |||| |  ||||||||||| ||||||||||| || ||||   || || ||| ||||||||||||||||||||||    
T  14593962 tcatacagaaca-atgttaaaccaagaatcagaatttcat-tctacattattgaaagtaaacttcacccttaccttaatt 14593885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 219
Target Start/End: Complemental strand, 20258214 - 20258104
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 208  Q
    |||||||||||||  ||||||||||||| | ||||||  ||| ||||| |||| ||||||||||||||||| ||||| | ||||||||||  ||||||||    
T  20258214 aaaacctgttaaaatcaaaatcagaattaagtatctacactattgaagtaaacctcacccttaccttaatttagaagaaaaaatgcaccgcgattggatt 20258115  T
Q  209 ctcttggctct 219  Q
    |||||||||||    
T  20258114 ctcttggctct 20258104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 219
Target Start/End: Complemental strand, 21044844 - 21044734
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 208  Q
    |||||||||||||  ||||||||||||| | ||||||  ||| ||||| |||| ||||||||||||||||| ||||| | ||||||||||  ||||||||    
T  21044844 aaaacctgttaaaatcaaaatcagaattaagtatctacactattgaagtaaacctcacccttaccttaatttagaagaaaaaatgcaccgcgattggatt 21044745  T
Q  209 ctcttggctct 219  Q
    |||||||||||    
T  21044744 ctcttggctct 21044734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 20005022 - 20004842
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaatttcccaattt 101  Q
    |||||||||||| |||||||||||| || ||||||||  ||  |||||||||||||||| |||||||||  | ||||| |  ||| |||  |||| | ||    
T  20005022 tgtatgcactcataacctatttctaacaccaaaacaatgattcctacactcaattcacccaaaaaccaaagaatcaaacctaaactcaaaatccccaatt 20004923  T
Q  102 tcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 183  Q
    ||  | | ||| ||||||||||||||||||||||| || |||||  ||||||||| |||| ||||||||||||||| |||||    
T  20004922 tctaccataaa-cctgttaaaccaaaatcagaattaaaaatctacactactgaagtaaacctcacccttaccttaaatcaga 20004842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 261
Target Start/End: Complemental strand, 20839247 - 20838989
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaat-ttcccaatt 100  Q
    |||||| ||||| |||||||||||| ||||| |||||||||  |||||||||||||||| ||||||| ||||||||| |   | |||||  |||||||||    
T  20839247 tgtatgtactcataacctatttctaacatcagaacaacaattcctacactcaattcacccaaaaacctagaattcaacataaaccccaaaattcccaatt 20839148  T
Q  101 ttcatctagaaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccgg 199  Q
     |||  ||   ||| |||||||  ||||||||||||| | || |||   || ||||| || || |||||||||||||||||||| | | ||| ||||       
T  20839147 ctcacata---aacttgttaaaatcaaaatcagaattcattaactacaatattgaagtaacct-cacccttaccttaattcagacgaacaaaagcacata 20839052  T
Q  200 aattggattctcttggctcttctc---ccttttctcccaaaacttgtctgtttgcacgtaaaagc 261  Q
    | |||||||| |||||||||||||   |||||||||||||  |||||||||||||||||||||||    
T  20839051 atttggattcacttggctcttctctccccttttctcccaa--cttgtctgtttgcacgtaaaagc 20838989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 194
Target Start/End: Original strand, 19860482 - 19860566
Alignment:
Q  111 aaacctgtt-aaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgc 194  Q
    ||||||||| ||| ||||||||||||| |||| |||| ||| |||||||||| ||||||||||||||||||||||||| ||||||    
T  19860482 aaacctgttcaaatcaaaatcagaattcaataactatactattgaagcaaacctcacccttaccttaattcagaaggaaaaatgc 19860566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 16266075 - 16265988
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||||||||||||| ||||||||||| |||| |||||  ||| ||||| |||| |||||||||||||||||||||| |||||||||||    
T  16266075 aaaacctgttaaactcaaaatcagaaattaaaatctacactattgaagtaaacctcacccttaccttaattcagaatgagaaatgcac 16265988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 21682904 - 21682835
Alignment:
Q  110 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaatt 179  Q
    ||||| |||||||||||||||| |||| |||| |||| |||||||||||||| |||||||||||||||||    
T  21682904 aaaacttgttaaaccaaaatcaaaattcaataactatactactgaagcaaacctcacccttaccttaatt 21682835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 194
Target Start/End: Complemental strand, 36445073 - 36444881
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaat-ttcccaatt 100  Q
    ||||||||||| |||| |||| ||| ||||| |||| |||| ||||||||||| ||||| ||||||| ||||||||| |   | |||||  |||||||||    
T  36445073 tgtatgcactcggaacttattcctaacatcagaacagcaatctctacactcaaatcacccaaaaacctagaattcaacataaaccccaaaattcccaatt 36444974  T
Q  101 ttcatctagaaaacctgttaaac--caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgc 194  Q
     | |  ||   |||||||||||   ||||||||||||| || | ||||  ||||||||||||| |||||||||||||||||||||| || ||||||    
T  36444973 ctaacata---aacctgttaaaaatcaaaatcagaattcaacaactatattactgaagcaaacctcacccttaccttaattcagaaagacaaatgc 36444881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 14564435 - 14564507
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||||||||||  ||||| ||||| |||||||||||||| |||||||||||||| ||||||| || ||||||||    
T  14564435 caaaatcagagattaatgtctatactactgaagcaaacctcacccttaccttagttcagaatgaaaaatgcac 14564507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 14567968 - 14568040
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||||||||||  ||||| ||||| |||||||||||||| |||||||||||||| ||||||| || ||||||||    
T  14567968 caaaatcagagattaatgtctatactactgaagcaaacctcacccttaccttagttcagaatgaaaaatgcac 14568040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 19987505 - 19987429
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaaccaagaattcaa 78  Q
    ||||||||||||||||||||| |||  |||| |||||||||  ||||||||||||||| |||||||| |||||||||    
T  19987505 tgtatgcactcagaacctattcctaatatcagaacaacaattcctacactcaattcactcaaaaacctagaattcaa 19987429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 20773240 - 20773176
Alignment:
Q  155 agcaaacttcacccttaccttaattcagaagg-agaaatgcaccggaattggattctcttggctc 218  Q
    ||||||| |||||||||||||||||||||||| | |||||||| | |||||||||||||||||||    
T  20773240 agcaaacctcacccttaccttaattcagaaggaaaaaatgcacagcaattggattctcttggctc 20773176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 20783034 - 20782970
Alignment:
Q  155 agcaaacttcacccttaccttaattcagaagg-agaaatgcaccggaattggattctcttggctc 218  Q
    ||||||| |||||||||||||||||||||||| | |||||||| | |||||||||||||||||||    
T  20783034 agcaaacctcacccttaccttaattcagaaggaaaaaatgcacagcaattggattctcttggctc 20782970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 21685393 - 21685200
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaa-ccaagaattcaaaacctaacccaat-ttcccaat 99  Q
    ||||||||  |||||||||||||||  |||||||||  ||| |||||||||||||||| |||||| |||| |||||| |    |||||||  ||||||||    
T  21685393 tgtatgcaaccagaacctatttctaatatcaaaacagtaatctctacactcaattcactcaaaaatccaataattcacata--aacccaaaattcccaat 21685296  T
Q  100 tttcatctagaaaacctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||  |||    |||||||||||||| ||||||||||||  | || ||| ||||||||| |||| ||||||||||||||||||||| | | ||||||||    
T  21685295 ttctatcat--aaacctgttaaacccaaaatcagaattagacatatatactactgaagtaaacctcacccttaccttaattcagatgaacaaatgcac 21685200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 21689742 - 21689549
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaa-ccaagaattcaaaacctaacccaat-ttcccaat 99  Q
    ||||||||  |||||||||||||||  |||||||||  ||| |||||||||||||||| |||||| |||| |||||| |    |||||||  ||||||||    
T  21689742 tgtatgcaaccagaacctatttctaatatcaaaacagtaatctctacactcaattcactcaaaaatccaataattcacata--aacccaaaattcccaat 21689645  T
Q  100 tttcatctagaaaacctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||  |||    |||||||||||||| ||||||||||||  | || ||| ||||||||| |||| ||||||||||||||||||||| | | ||||||||    
T  21689644 ttctatcat--aaacctgttaaacccaaaatcagaattagacatatatactactgaagtaaacctcacccttaccttaattcagatgaacaaatgcac 21689549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 23223904 - 23223817
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||||||||||||| |||||||||| ||||| |||||  ||| ||||| |||| ||||||||||||||||| |||| || ||||||||    
T  23223904 aaaacctgttaaactcaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttaatttagaatgaaaaatgcac 23223817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 43688312 - 43688379
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||| ||||||||||| |||| |||||| ||||||||| |||| ||||||||||||||    
T  43688312 aaaacctgttaaactcaaaatcagaaattaaaatctatactactgaagtaaacctcacccttacctta 43688379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 22744569 - 22744748
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaatttcccaattt 101  Q
    ||||||||  ||||||||||||||| |||||||||||   | ||||| |||||| |||| |||||||||  |  |||||||||||||||||| |||||||    
T  22744569 tgtatgcaaccagaacctatttctaacatcaaaacaaggtt-tctaccctcaatccacccaaaaaccaaagaaccaaaacctaacccaattttccaattt 22744667  T
Q  102 tcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactg-aagcaaacttcacccttaccttaattcaga 183  Q
    ||||  || ||   |||||||||||||||| ||||| || ||||   || || ||| |||| |||||||||||||||||||||    
T  22744668 tcatacag-aactatgttaaaccaaaatcaaaatttcat-tctacattattgaaagtaaacatcacccttaccttaattcaga 22744748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 196
Target Start/End: Complemental strand, 3223887 - 3223802
Alignment:
Q  112 aacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||||||||||| |||||||||||| ||| |||||  ||| ||||| |||| ||||||||||||||||||| || || ||||||||    
T  3223887 aacctgttaaactcaaaatcagaatctaaaatctacactattgaagtaaacctcacccttaccttaattcataatgaaaaatgcac 3223802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 20258310 - 20258258
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 55  Q
    ||||||||||||||||||||||||| ||||| |||||||||  ||||||||||    
T  20258310 tgtatgcactcagaacctatttctaacatcagaacaacaattcctacactcaa 20258258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 21044940 - 21044888
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 55  Q
    ||||||||||||||||||||||||| ||||| |||||||||  ||||||||||    
T  21044940 tgtatgcactcagaacctatttctaacatcagaacaacaattcctacactcaa 21044888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 11391813 - 11391746
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||| ||||||||||| |||| || ||| ||||||||| |||| ||||||||||||||    
T  11391813 aaaacctgttaaactcaaaatcagaaattaaaatttatactactgaagtaaacctcacccttacctta 11391746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 14745725 - 14745658
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||| |||||||||||||||| |||||  ||| ||||| |||| ||||||||||||||    
T  14745725 aaaacctgttaaactcaaaatcagaatttaaaatctacactattgaagtaaacctcacccttacctta 14745658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 183
Target Start/End: Original strand, 23654335 - 23654409
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 183  Q
    ||||| |||||||| ||||||||||||  || |||||| |||||||||||||| || || |||||||||||||||    
T  23654335 aaaacttgttaaactcaaaatcagaatcaaacatctatactactgaagcaaacctcccctttaccttaattcaga 23654409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 27364223 - 27364328
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 208  Q
    |||||||||||||| ||||||||||| | |||| |||  ||| |  || |||| |||||||||||||||||||||| || |||||||| | || ||||||    
T  27364223 aaaacctgttaaactcaaaatcagaaatcaataactacacta-tatagtaaacctcacccttaccttaattcagaatgaaaaatgcacagcaaatggatt 27364321  T
Q  209 ctcttgg 215  Q
    |||||||    
T  27364322 ctcttgg 27364328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 29304830 - 29304768
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||| ||||||||||| |||| |||||  ||| |||||||||||||||||||||||||    
T  29304830 ctgttaaactcaaaatcagaaattaacatctacactattgaagcaaacttcacccttacctta 29304768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 29329023 - 29329069
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctac 49  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||||    
T  29329023 tgtatacactcagaacctatttctaacatcaaaacaacaatttctac 29329069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 27346574 - 27346674
Alignment:
Q  94 cccaattttcatctagaaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaat 192  Q
    |||||||||||||   |||| ||||||||| ||||||||||| | |||| |||  ||| ||||| |||| |||| ||||||||||||||||| || ||||    
T  27346574 cccaattttcatc---aaaatctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacacttaccttaattcagaatgaaaaat 27346670  T
Q  193 gcac 196  Q
    ||||    
T  27346671 gcac 27346674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 177
Target Start/End: Complemental strand, 7003276 - 7003208
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||||||| ||||||||||||| |||| |||  ||| ||||| |||| |||||||||||||||    
T  7003276 aaaacctgttaaactcaaaatcagaattcaataactacactattgaagtaaacctcacccttaccttaa 7003208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 19297425 - 19297511
Alignment:
Q  89 aatttcccaattttcatctagaaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||||| | |||| || |||||||| ||||||||||| || | |||||| ||||||||| |||| ||||||||||||||    
T  19297425 aatttcccaattttcacc-agaacac-tgttaaactcaaaatcagaaattgaaatctatactactgaagtaaacctcacccttacctta 19297511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 177
Target Start/End: Complemental strand, 26485221 - 26485153
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||||||| |||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||||    
T  26485221 aaaacctgttaaactcaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttaa 26485153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 177
Target Start/End: Complemental strand, 40143547 - 40143479
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||||||| ||||||||||| |||| |||||  ||| ||||| |||| |||||||||||||||    
T  40143547 aaaacctgttaaactcaaaatcagaaattaaaatctacactattgaagtaaacctcacccttaccttaa 40143479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 184
Target Start/End: Complemental strand, 9204557 - 9204482
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 184  Q
    |||||||||||||| |||||||||| |||||  ||||  ||| ||||| ||||  |||||||||||||||||||||    
T  9204557 aaaacctgttaaactcaaaatcagactttaaattctacactattgaagtaaaccccacccttaccttaattcagaa 9204482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 10955892 - 10955825
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||| |||||||||| ||||| |||||  ||| ||||| |||| ||||||||||||||    
T  10955892 aaaacctgttaaacacaaaatcagactttaaaatctacactattgaagtaaacctcacccttacctta 10955825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 20773380 - 20773345
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaaca 38  Q
    ||||||||||||||||||||||||| ||||||||||    
T  20773380 tgtatgcactcagaacctatttctaacatcaaaaca 20773345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 20783174 - 20783139
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaaca 38  Q
    ||||||||||||||||||||||||| ||||||||||    
T  20783174 tgtatgcactcagaacctatttctaacatcaaaaca 20783139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 21685175 - 21685129
Alignment:
Q  211 cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaa 258  Q
    |||||||||||||||||||||||| ||||||| |||||| ||||||||    
T  21685175 cttggctcttctcccttttctccc-aaacttgactgttttcacgtaaa 21685129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 21689524 - 21689478
Alignment:
Q  211 cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaa 258  Q
    |||||||||||||||||||||||| ||||||| |||||| ||||||||    
T  21689524 cttggctcttctcccttttctccc-aaacttgactgttttcacgtaaa 21689478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 31411717 - 31411650
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||| |||||| ||||||||||||| |||| |||| ||||||||| |||  ||||||||||||||    
T  31411717 aaaacctattaaactcaaaatcagaattcaatacctatactactgaagtaaaactcacccttacctta 31411650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 31417899 - 31417832
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||| ||| ||||||||| |||| |||| ||||||||| |||  ||||||||||||||    
T  31417899 aaaacctgttaaactcaatatcagaattcaatacctatactactgaagtaaaactcacccttacctta 31417832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 1264896 - 1264942
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctac 49  Q
    ||||||||||||||||||||||||| ||||| || |||||| |||||    
T  1264896 tgtatgcactcagaacctatttctaacatcagaataacaatctctac 1264942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 259
Target Start/End: Complemental strand, 9272266 - 9272232
Alignment:
Q  225 cttttctcccaaaacttgtctgtttgcacgtaaaa 259  Q
    ||||||||||||||||||||||||| |||||||||    
T  9272266 cttttctcccaaaacttgtctgttttcacgtaaaa 9272232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 21682991 - 21682949
Alignment:
Q  13 cagaacctatttctaccatcaaaacaacaatatctacactcaa 55  Q
    ||||||||||||||| |||||||||| |||| |||||||||||    
T  21682991 cagaacctatttctaacatcaaaacatcaatctctacactcaa 21682949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 183
Target Start/End: Complemental strand, 25623914 - 25623794
Alignment:
Q  63 aaaaccaagaattcaaaaccta-acccaatttcccaattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactg-aagcaaa 160  Q
    ||||||||| | ||| |||||| |||||| ||||||||||| | | | ||||| ||||||||||||||||||| |||  |||||| ||| || ||| |||    
T  25623914 aaaaccaaggaatcataacctagacccaaattcccaatttttaacca-aaaacatgttaaaccaaaatcagaa-ttacaatctatactattgaaagtaaa 25623817  T
Q  161 cttcacccttaccttaattcaga 183  Q
    | |||||||||||||| ||||||    
T  25623816 cctcacccttaccttagttcaga 25623794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 27890813 - 27890874
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||| |||||| |||||| |||| |||| |||||||||||||| ||||||||||||||    
T  27890813 ctgttaaacacaaaattagaatt-aataactatactactgaagcaaacctcacccttacctta 27890874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 27897146 - 27897207
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||| |||||| |||||| |||| |||| |||||||||||||| ||||||||||||||    
T  27897146 ctgttaaacacaaaattagaatt-aataactatactactgaagcaaacctcacccttacctta 27897207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 27903052 - 27903113
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||| |||||| |||||| |||| |||| |||||||||||||| ||||||||||||||    
T  27903052 ctgttaaacacaaaattagaatt-aataactatactactgaagcaaacctcacccttacctta 27903113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 27949471 - 27949532
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||| |||||| |||||| |||| |||| |||||||||||||| ||||||||||||||    
T  27949471 ctgttaaacacaaaattagaatt-aataactatactactgaagcaaacctcacccttacctta 27949532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 29298275 - 29298213
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||| ||||||||||| |||| |||||  ||| |||||||||||||| ||||||||||    
T  29298275 ctgttaaactcaaaatcagaaattaacatctacactattgaagcaaacttcagccttacctta 29298213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 29329124 - 29329186
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||| |||||| |||| |||| |||||  |||||||||||||| ||||||||||||||    
T  29329124 ctgttaaactcaaaattagaaattaacatctacactactgaagcaaacctcacccttacctta 29329186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 4519930 - 4519865
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaatt 179  Q
    ||||||||| ||||||||||| | |||| ||||  |||||||| |||| |||||||||||||||||    
T  4519930 ctgttaaacacaaaatcagaaatcaataactatattactgaagaaaacctcacccttaccttaatt 4519865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 22459027 - 22459092
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaatt 179  Q
    ||||||||| ||||||||||| | |||| ||||  |||||||| |||| |||||||||||||||||    
T  22459027 ctgttaaacacaaaatcagaaatcaataactatattactgaagaaaacctcacccttaccttaatt 22459092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 16886489 - 16886429
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 184  Q
    |||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||| |||||||    
T  16886489 caaaatcagactttaaaatctacactattgaagtaaacatcacccttaccttagttcagaa 16886429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 19860385 - 19860433
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacac 51  Q
    |||||||||||||| |||||||||| ||||| |||| |||| |||||||    
T  19860385 tgtatgcactcagaccctatttctaacatcagaacatcaatctctacac 19860433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 35541965 - 35542009
Alignment:
Q  152 tgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||||| |||| |||||||||||||||||||||| || ||||||||    
T  35541965 tgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 35542009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 3e-51; HSPs: 81)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 262
Target Start/End: Original strand, 13318551 - 13318814
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaacc-aagaattcaaaacctaacccaatttcccaatt 100  Q
    ||||||||  ||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||| || ||| ||| |   | || || | |||||||    
T  13318551 tgtatgcaaccagaacctatttctaacatcaaaacaacaatctctacactcaattcactcaaaaacccaataatccaacataaacccaaaatccccaatt 13318650  T
Q  101 ttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccgga 200  Q
    |    |||  |    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |    
T  13318651 t----ctacca----tgttaaatcaaaatcagaattcaatatctattctactgaagcaaacttcacccttaccttaattcagaaggacaaatgcacagaa 13318742  T
Q  201 attggattct----------cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaagca 262  Q
    ||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13318743 attggattctcttggctctacttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaagca 13318814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 3 - 262
Target Start/End: Complemental strand, 15436881 - 15436612
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaatttcccaattt 101  Q
    ||||||||  ||||||||||||||| ||||||||||  |||  |||||||||||||||| |||||||||||||||||     | |||||  | || | ||    
T  15436881 tgtatgcaaccagaacctatttctaacatcaaaacagtaattcctacactcaattcacccaaaaaccaagaattcaacttaaaccccaaaattccgaatt 15436782  T
Q  102 tcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaa 201  Q
    ||  | | ||| ||||||||||||||||||||||| || |||||  ||||||||| |||| ||||||||||||||||||||||||  |||||||| | ||    
T  15436781 tctaccataaa-cctgttaaaccaaaatcagaattaaacatctacactactgaagtaaacctcacccttaccttaattcagaagggcaaatgcacagaaa 15436683  T
Q  202 ttggattct----------cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaagca 262  Q
    ||||||| |          |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15436682 ttggattatcttggctctacttggctcttctcccttttctcccaaaacttgtctgttggcacgtaaaagca 15436612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 227
Target Start/End: Complemental strand, 14168861 - 14168637
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaat--ttcccaat 99  Q
    ||||||||||||||||||||||||| |||||||||| |||| ||||||||||| ||||| ||||||| ||||||||| |   | |||||   ||||||||    
T  14168861 tgtatgcactcagaacctatttctaacatcaaaacagcaatttctacactcaaatcacccaaaaacctagaattcaacataaaccccaaaaattcccaat 14168762  T
Q  100 tttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccgg 199  Q
    | | |||    ||||||||||||   ||||||||||| |||| ||||  ||||||||||||| ||||||||||||||||||||||||| ||||||||       
T  14168761 tct-atcat--aaacctgttaaattcaaatcagaattcaataactatattactgaagcaaacctcacccttaccttaattcagaaggacaaatgcacaac 14168665  T
Q  200 aattggattctcttggctcttctccctt 227  Q
     || ||||||||||||||||||||||||    
T  14168664 gatcggattctcttggctcttctccctt 14168637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 227
Target Start/End: Complemental strand, 14173108 - 14172884
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaat--ttcccaat 99  Q
    ||||||||||||||||||||||||| |||||||||| |||| ||||||||||| ||||| ||||||| ||||||||| |   | |||||   ||||||||    
T  14173108 tgtatgcactcagaacctatttctaacatcaaaacagcaatttctacactcaaatcacccaaaaacctagaattcaacataaaccccaaaaattcccaat 14173009  T
Q  100 tttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccgg 199  Q
    | | |||    ||||||||||||   ||||||||||| |||| ||||  ||||||||||||| ||||||||||||||||||||||||| ||||||||       
T  14173008 tct-atcat--aaacctgttaaattcaaatcagaattcaataactatattactgaagcaaacctcacccttaccttaattcagaaggacaaatgcacaac 14172912  T
Q  200 aattggattctcttggctcttctccctt 227  Q
     || ||||||||||||||||||||||||    
T  14172911 gatcggattctcttggctcttctccctt 14172884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 111 - 259
Target Start/End: Complemental strand, 15097166 - 15097019
Alignment:
Q  111 aaacctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaatt-ggatt 208  Q
    |||||||||||||| |||||||||||| |||| |||| |||||||||||||| ||||||||||||||||||||||||| |||||||| | ||||  | ||    
T  15097166 aaacctgttaaacccaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagaaggacaaatgcacagcaattaaggtt 15097067  T
Q  209 ctcttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaa 259  Q
    | ||||| |||||||||||||||||||||||   ||||||| |||||||||    
T  15097066 cacttggttcttctcccttttctcccaaaac---tctgttttcacgtaaaa 15097019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 111 - 241
Target Start/End: Complemental strand, 15103542 - 15103410
Alignment:
Q  111 aaacctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaatt-ggatt 208  Q
    |||||||||||||| |||||||||||| |||| |||| |||||||||||||| ||||||||||||||||||||||||| |||||||| | ||||  | ||    
T  15103542 aaacctgttaaacccaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagaaggacaaatgcacagcaattcaggtt 15103443  T
Q  209 ctcttggctcttctcccttttctcccaaaactt 241  Q
    | ||||| |||||||||||||||||||||||||    
T  15103442 cacttggttcttctcccttttctcccaaaactt 15103410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 240
Target Start/End: Complemental strand, 81408 - 81168
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcaccaaaaa---ccaagaattcaaaacctaacccaat-ttcccaa 98  Q
    ||||||||||||||||||||||||| |||||||||| |||| ||||| |||||||||| |||||   |||| ||| ||| |   | |||||  |||| ||    
T  81408 tgtatgcactcagaacctatttctaacatcaaaacagcaatctctaccctcaattcactaaaaaaacccaataatccaacataaaccccaaaattcctaa 81309  T
Q  99 ttttcatctagaaaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcacc 197  Q
    || | |||    |||| ||||||| ||||| |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||     
T  81308 ttct-atcat--aaacttgttaaatccaaactcagaattcaatatctatactactgaagcaaacctcacccttaccttaattcagaaggacaaatgcaca 81212  T
Q  198 ggaatt-ggattctcttggctcttctcccttttctcccaaaact 240  Q
      ||||  | ||| ||||||||||||||||||||||||||||||    
T  81211 acaattcaggttcacttggctcttctcccttttctcccaaaact 81168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 110 - 218
Target Start/End: Complemental strand, 15085175 - 15085067
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 208  Q
    |||||||||||||| ||||||||||||| || |||||| ||||||||| |||| ||||||||||||||||||||||||| |||||||| | |||||||||    
T  15085175 aaaacctgttaaactcaaaatcagaatt-aacatctatactactgaagtaaacctcacccttaccttaattcagaaggacaaatgcacagaaattggatt 15085077  T
Q  209 ctcttggctc 218  Q
    ||||||||||    
T  15085076 ctcttggctc 15085067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 45186302 - 45186482
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaaccc---aatttcccaa 98  Q
    ||||||||  ||||||||||||||| ||||||||||  |||  |||||||||||||||| |||||||||||||||||  | ||| ||   || |||||||    
T  45186302 tgtatgcaaccagaacctatttctaacatcaaaacagtaattcctacactcaattcacccaaaaaccaagaattcaa--cttaaaccccaaaattcccaa 45186399  T
Q  99 ttttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 183  Q
    |||  | |    |||||||||||||||||||||||||| || |||||| |||||||||||||| |||||||||||||||||||||    
T  45186400 tttctaccat--aaacctgttaaaccaaaatcagaattaaacatctatactactgaagcaaacctcacccttaccttaattcaga 45186482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 111 - 227
Target Start/End: Original strand, 12555403 - 12555519
Alignment:
Q  111 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattct 210  Q
    |||||| ||||||||||||||||||| |||| |||| |||||||||||||| |||| ||||||||||||||||| || |||  |||    || |||||||    
T  12555403 aaacctattaaaccaaaatcagaattcaataactatactactgaagcaaacctcactcttaccttaattcagaaagacaaaaacacaacgatcggattct 12555502  T
Q  211 cttggctcttctccctt 227  Q
    |||||||||||||||||    
T  12555503 cttggctcttctccctt 12555519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 14580868 - 14580675
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcaccaaaaa--ccaagaattcaaaacctaacccaatttcccaatt 100  Q
    ||||||||||||||||||||||||| ||||||| ||   ||  |||||||||||||||| ||||  ||||||||||||     | || || |||||||||    
T  14580868 tgtatgcactcagaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaaaacccaagaattcaacttaaacccaaaattcccaatt 14580769  T
Q  101 ttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |  | |    |||| ||||||| ||||||||||||| || |||||| |||||||||||||| ||||||||||||||||||||| | | ||||||||    
T  14580768 tctaccat--aaacttgttaaatcaaaatcagaattaaaaatctatactactgaagcaaacctcacccttaccttaattcagatgaacaaatgcac 14580675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 196
Target Start/End: Complemental strand, 11854618 - 11854538
Alignment:
Q  116 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||||||||||||||||||||| |||| |||  ||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  11854618 tgttaaaccaaaatcagaattcaataactacactattgaagcaaacctcacccttaccttaattcagaaggaaaaatgcac 11854538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 223
Target Start/End: Original strand, 3328762 - 3328871
Alignment:
Q  115 ctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaat-tggattctctt 213  Q
    |||||||||||||||||||||| ||||||||| ||||||||| |||  |||||||||||||||||||   | |||||||||| | |||  ||||||||||    
T  3328762 ctgttaaaccaaaatcagaattcaatatctatactactgaagtaaaactcacccttaccttaattcaattgaagaaatgcacagcaataaggattctctt 3328861  T
Q  214 ggctcttctc 223  Q
    || |||||||    
T  3328862 ggttcttctc 3328871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 196
Target Start/End: Original strand, 10520753 - 10520833
Alignment:
Q  116 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||||||||||||||||| || |||| |||  ||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  10520753 tgttaaaccaaaatcagatttcaataactacactattgaagcaaacctcacccttaccttaattcagaaggaaaaatgcac 10520833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 212
Target Start/End: Original strand, 33405576 - 33405679
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 208  Q
    |||||||||||||| |||||||||| ||||| |||||  ||| ||||| |||| ||||||||||||||||| |||| || |||||||| | |||||||||    
T  33405576 aaaacctgttaaactcaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttaatttagaatgaaaaatgcacagcaattggatt 33405675  T
Q  209 ctct 212  Q
    ||||    
T  33405676 ctct 33405679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 32772392 - 32772457
Alignment:
Q  116 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 181  Q
    ||||||||||||||||||||| |||| |||| |||||||||||||| || ||||||||||||||||    
T  32772392 tgttaaaccaaaatcagaattcaataactatactactgaagcaaacctcgcccttaccttaattca 32772457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 15143174 - 15143246
Alignment:
Q  111 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 183  Q
    ||||| |||||||||||||||||||| || |||||| ||||||||| |||| |||||||||||||| ||||||    
T  15143174 aaacccgttaaaccaaaatcagaattaaaaatctatactactgaagtaaacctcacccttaccttatttcaga 15143246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 16475337 - 16475265
Alignment:
Q  111 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 183  Q
    |||||||||||||||||||||||||| || |||||  ||||||||| |||| |||||||| ||||||||||||    
T  16475337 aaacctgttaaaccaaaatcagaattaaaaatctacactactgaagtaaacctcacccttgccttaattcaga 16475265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 11340665 - 11340752
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||||||||||||| |||||||||| ||||||| |||   |||||||| |||| |||||||||||||||||||||| || ||||||||    
T  11340665 aaaacctgttaaactcaaaatcagactttaatagctacaatactgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 11340752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 18956086 - 18956015
Alignment:
Q  110 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 181  Q
    ||||||||||||||  ||||||||||| ||||||||| ||||||||| |||  |||||||||||||||||||    
T  18956086 aaaacctgttaaactcaaatcagaattcaatatctatactactgaagtaaaactcacccttaccttaattca 18956015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 30271027 - 30270964
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    ||||||||| ||||||||||| |||| |||||| ||||||||||||||||||||||||||||||    
T  30271027 ctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacttcacccttaccttaa 30270964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 12454985 - 12455053
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||||||| ||||||||||| |||| |||||| ||||||||| |||| |||||||||||||||    
T  12454985 aaaacctgttaaactcaaaatcagaaattaagatctatactactgaagtaaacctcacccttaccttaa 12455053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 5186490 - 5186403
Alignment:
Q  110 aaaacctgttaaaccaaaatcagaattt-aatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||||||||||||||  |||||||| ||| || |||||| ||| ||||| |||| |||||||||||||||||||||| || ||||||||    
T  5186490 aaaacctgttaaactcaaatcagacttttaaaatctatactattgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 5186403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 16951440 - 16951369
Alignment:
Q  110 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 181  Q
    ||||||||||||||  ||||||||||| |||| |||| ||||||||| |||  |||||||||||||||||||    
T  16951440 aaaacctgttaaactcaaatcagaattcaatacctatactactgaagtaaaactcacccttaccttaattca 16951369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 18436438 - 18436351
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||||||||| |||| |||||||||| ||||||| |||   |||||||| |||| |||||||||||||||||||||| || ||||||||    
T  18436438 aaaacctgtcaaactcaaaatcagactttaatagctacaatactgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 18436351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 12429685 - 12429739
Alignment:
Q  1 gatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 55  Q
    ||||||||||||||||||||||||||| ||||| |||||||||  ||||||||||    
T  12429685 gatgtatgcactcagaacctatttctaacatcagaacaacaattcctacactcaa 12429739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 16843112 - 16843050
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||| ||||||||||| |||| |||||| |||||||||||||| ||||||||||||||    
T  16843112 ctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttacctta 16843050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 12800714 - 12800665
Alignment:
Q  211 cttggctcttctcccttttctcccaaaacttgtctg-tttgcacgtaaaa 259  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||    
T  12800714 cttggctcttctcccttttctcccaaaacttgtatgttttgcacgtaaaa 12800665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 15103650 - 15103593
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac 60  Q
    ||||||||  ||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  15103650 tgtatgcaaccagaacctatttctcacatcaaaacaacaatctctacactcaattcac 15103593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 3328659 - 3328711
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 55  Q
    ||||| ||||||||||||||||||| |||||||||| |||| |||||||||||    
T  3328659 tgtatacactcagaacctatttctaacatcaaaacagcaatctctacactcaa 3328711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 176
Target Start/End: Original strand, 6412794 - 6412858
Alignment:
Q  113 acctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||||| ||||||||||||  ||||||||| ||| |||||||||| ||||||||||||||    
T  6412794 acctgttaaactcaaaatcagaatacaatatctatactaatgaagcaaacctcacccttacctta 6412858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 11298930 - 11298870
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 184  Q
    ||||||||||  ||||| ||||| |||||||||||||| |||||||||||||| |||||||    
T  11298930 caaaatcagagattaatgtctatactactgaagcaaacctcacccttaccttagttcagaa 11298870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 11307294 - 11307234
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 184  Q
    ||||||||||  ||||| ||||| |||||||||||||| |||||||||||||| |||||||    
T  11307294 caaaatcagagattaatgtctatactactgaagcaaacctcacccttaccttagttcagaa 11307234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 12462441 - 12462509
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    ||||| |||||||| ||||||||||| |||| |||||| ||||||||| |||| |||||||||||||||    
T  12462441 aaaacttgttaaactcaaaatcagaaattaagatctatactactgaagtaaacctcacccttaccttaa 12462509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 13020631 - 13020698
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||| ||||||||||| |||||| |||  ||| |||||||||| ||||||||||||||    
T  13020631 aaaacctgttaaactcaaaatcagaaattaataactacactattgaagcaaacctcacccttacctta 13020698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 13026838 - 13026905
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||| ||||||||||| |||||| |||  ||| |||||||||| ||||||||||||||    
T  13026838 aaaacctgttaaactcaaaatcagaaattaataactacactattgaagcaaacctcacccttacctta 13026905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 17467456 - 17467381
Alignment:
Q  111 aaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 185  Q
    |||||||||||| |||||||||||||  |||| ||||  ||||||| ||||  |||||||||||||||||||||||    
T  17467456 aaacctgttaaatccaaaatcagaatccaataactatattactgaaacaaatctcacccttaccttaattcagaag 17467381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 17585758 - 17585833
Alignment:
Q  111 aaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 185  Q
    |||||||||||| |||||||||||||  |||| ||||  ||||||| ||||  |||||||||||||||||||||||    
T  17585758 aaacctgttaaatccaaaatcagaatccaataactatattactgaaacaaatctcacccttaccttaattcagaag 17585833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 184
Target Start/End: Complemental strand, 26089198 - 26089123
Alignment:
Q  110 aaaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 184  Q
    ||||||||||||| ||||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||| |||||||    
T  26089198 aaaacctgttaaaaccaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttagttcagaa 26089123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 184
Target Start/End: Complemental strand, 26113003 - 26112928
Alignment:
Q  110 aaaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 184  Q
    ||||||||||||| ||||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||| |||||||    
T  26113003 aaaacctgttaaaaccaaaatcagactttaaaatctacactaatgaagtaaacctcacccttaccttagttcagaa 26112928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 184
Target Start/End: Complemental strand, 26119620 - 26119545
Alignment:
Q  110 aaaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 184  Q
    ||||||||||||| ||||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||| |||||||    
T  26119620 aaaacctgttaaaaccaaaatcagactttaaaatctacactaatgaagtaaacctcacccttaccttagttcagaa 26119545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 26288983 - 26288917
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||| ||||||||| ||||||||||||| || |||||| |||||||||||||| ||||||||||||||    
T  26288983 aaaatctgttaaactcaaaatcagaatt-aacatctatactactgaagcaaacctcacccttacctta 26288917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 30602108 - 30602021
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||||||||||||  |||||||||||||||||| |||   |  ||||| |||| |||||||||||||||||||||| || ||||||||    
T  30602108 aaaacctgttaaatacaaaatcagaatttaataactacattcttgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 30602021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 37380861 - 37380936
Alignment:
Q  111 aaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 185  Q
    |||||||||||| |||||||||||||| |||| ||||  |||||||  |||  |||||||||||||||||||||||    
T  37380861 aaacctgttaaatccaaaatcagaattcaataactatattactgaaataaatctcacccttaccttaattcagaag 37380936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 750768 - 750834
Alignment:
Q  110 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||||||||  |||||||| ||||| |||||| ||| ||||| |||| ||||||||||||||    
T  750768 aaaacctgttaaactcaaatcagactttaaaatctatactattgaagtaaacctcacccttacctta 750834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 40684008 - 40683942
Alignment:
Q  110 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||||||||  |||||||| ||||| |||||| ||| ||||| |||| ||||||||||||||    
T  40684008 aaaacctgttaaactcaaatcagactttaaaatctatactattgaagtaaacctcacccttacctta 40683942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 46175250 - 46175312
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||| ||||||||||| |||| |||||| ||||||||| |||| ||||||||||||||    
T  46175250 ctgttaaactcaaaatcagaaattaaaatctatactactgaagtaaacctcacccttacctta 46175312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 48987167 - 48987101
Alignment:
Q  110 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||||||||  |||||||| ||||| |||||| ||| ||||| |||| ||||||||||||||    
T  48987167 aaaacctgttaaactcaaatcagactttaaaatctatactattgaagtaaacctcacccttacctta 48987101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 2378 - 2309
Alignment:
Q  110 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaatt 179  Q
    ||||||||||||||  ||||||||||  || |||||| ||||||||| |||  |||||||||||||||||    
T  2378 aaaacctgttaaactcaaatcagaatccaacatctatactactgaagtaaaactcacccttaccttaatt 2309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 15097274 - 15097217
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac 60  Q
    ||||||||  ||||||||||||||  |||||||||| |||| ||||||||||||||||    
T  15097274 tgtatgcaaccagaacctatttctcacatcaaaacaccaatctctacactcaattcac 15097217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 46681394 - 46681329
Alignment:
Q  111 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctt 175  Q
    ||||||||||||  ||||||||||||| || | |||| |||||||||||||| |||||||||||||    
T  46681394 aaacctgttaaattcaaaatcagaattcaaaaactatactactgaagcaaacctcacccttacctt 46681329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 198
Target Start/End: Original strand, 49151512 - 49151601
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccg 198  Q
    |||||||||||||| |||||||||| |||||| ||||  | | ||||| ||||  ||||||||||||| ||||||| || ||||||||||    
T  49151512 aaaacctgttaaactcaaaatcagactttaatttctacaccattgaagtaaaccccacccttaccttagttcagaatgaaaaatgcaccg 49151601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 198
Target Start/End: Original strand, 49158202 - 49158291
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccg 198  Q
    |||||||||||||| |||||||||| |||||| ||||  | | ||||| ||||  ||||||||||||| ||||||| || ||||||||||    
T  49158202 aaaacctgttaaactcaaaatcagactttaatttctacaccattgaagtaaaccccacccttaccttagttcagaatgaaaaatgcaccg 49158291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 12555305 - 12555357
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 55  Q
    ||||||||  ||||||||||||||| |||||||||| |||| |||||||||||    
T  12555305 tgtatgcaaccagaacctatttctaacatcaaaacagcaatctctacactcaa 12555357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 16184764 - 16184712
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 55  Q
    ||||||||||||||||||||||||| | ||| |||||||||  ||||||||||    
T  16184764 tgtatgcactcagaacctatttctaacctcagaacaacaattcctacactcaa 16184712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 19463600 - 19463672
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 181  Q
    |||||||||||||| | || ||||||||| |||||||| ||||||||| |||   ||||||||||||||||||    
T  19463600 aaaacctgttaaactccaattcagaatttcatatctatactactgaagtaaaacccacccttaccttaattca 19463672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 37288391 - 37288459
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||||||| |||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||||    
T  37288391 aaaacctgttaaactcaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttaa 37288459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 46650643 - 46650695
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||||  ||||| ||||| |||||||||||||| ||||||||||||||    
T  46650643 caaaatcagagattaatgtctatactactgaagcaaacctcacccttacctta 46650695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 2025470 - 2025403
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||| ||||||||||||||||  ||||  ||| ||||| |||| ||||||||||||||    
T  2025470 aaaacctgttaaactcaaaatcagaatttaaagtctacactattgaagtaaacctcacccttacctta 2025403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 37380764 - 37380811
Alignment:
Q  13 cagaacctatttctaccatcaaaacaacaatatctacactcaattcac 60  Q
    ||||||||| ||||||||||| |||| |||| ||||||||||||||||    
T  37380764 cagaacctaattctaccatcagaacatcaatttctacactcaattcac 37380811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 46348061 - 46348022
Alignment:
Q  4 gtatgcactcagaacctatttctaccatcaaaacaacaat 43  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  46348061 gtatgcactcagaacctatttctaacatcagaacaacaat 46348022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 13020533 - 13020575
Alignment:
Q  1 gatgtatgcactcagaacctatttctaccatcaaaacaacaat 43  Q
    ||||||| ||||||||||||||||||| ||||| |||||||||    
T  13020533 gatgtatacactcagaacctatttctaacatcagaacaacaat 13020575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 183
Target Start/End: Complemental strand, 16069671 - 16069629
Alignment:
Q  141 atctattctactgaagcaaacttcacccttaccttaattcaga 183  Q
    |||||| |||||||||||||| ||||||||||||||| |||||    
T  16069671 atctatactactgaagcaaacctcacccttaccttaaatcaga 16069629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 23521905 - 23521971
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctt 175  Q
    |||||||||||||| ||||||||||| |||||| |||  ||| ||||| |||| |||||||||||||    
T  23521905 aaaacctgttaaactcaaaatcagaaattaataactacactattgaagtaaacctcacccttacctt 23521971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 196
Target Start/End: Complemental strand, 40922167 - 40922081
Alignment:
Q  111 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||||||||||||| |||||||||| |||||  ||||  ||| ||||| ||||  ||||||||||||| ||||||| || ||||||||    
T  40922167 aaacctgttaaactcaaaatcagactttaaattctacactattgaagtaaaccccacccttaccttagttcagaatgaaaaatgcac 40922081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 137
Target Start/End: Original strand, 12695528 - 12695588
Alignment:
Q  76 caaaacctaacccaatttcccaattttcatctagaaaacctgttaaaccaaaatcagaattt 137  Q
    ||||||||||||||| ||||||||||| ||  |||| | | |||||||||||||||||||||    
T  12695528 caaaacctaacccaaattcccaattttgatacagaacaac-gttaaaccaaaatcagaattt 12695588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 14945162 - 14945109
Alignment:
Q  123 ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||| | ||||||||| ||||||||| |||  ||||||||||||||    
T  14945162 ccaaaatcagaaatcaatatctatactactgaagtaaaactcacccttacctta 14945109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 15372755 - 15372702
Alignment:
Q  123 ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||| | ||||||||| ||||||||| |||  ||||||||||||||    
T  15372755 ccaaaatcagaaatcaatatctatactactgaagtaaaactcacccttacctta 15372702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 37243511 - 37243446
Alignment:
Q  110 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctt 175  Q
    ||||||||||||||  ||||||||||  ||||||||| |||||||||  ||  |||||||||||||    
T  37243511 aaaacctgttaaactcaaatcagaatccaatatctatactactgaagtgaaactcacccttacctt 37243446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 42059483 - 42059548
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaatt 179  Q
    ||||||||| ||||||||||| | |||| ||||  |||||||| |||| |||||||||||||||||    
T  42059483 ctgttaaacacaaaatcagaaatcaataactatattactgaagaaaacctcacccttaccttaatt 42059548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 46681502 - 46681445
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac 60  Q
    ||||||||  ||||||||||||||| ||||| |||||| || | ||||||||||||||    
T  46681502 tgtatgcaaccagaacctatttctaacatcagaacaacgatctatacactcaattcac 46681445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 177
Target Start/End: Complemental strand, 2387827 - 2387759
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||||||| ||||||||||| |||| |||||  ||| ||||| |||| |||||||||| ||||    
T  2387827 aaaacctgttaaactcaaaatcagaaattaaaatctacactattgaagtaaacctcacccttactttaa 2387759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 4281121 - 4281181
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 184  Q
    |||| |||||||| |||| ||||  ||||||||||||  |||||||||||||| |||||||    
T  4281121 caaattcagaattcaataactatattactgaagcaaatctcacccttaccttagttcagaa 4281181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 12462355 - 12462391
Alignment:
Q  13 cagaacctatttctaccatcaaaacaacaatatctac 49  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  12462355 cagaacctaattctaacatcaaaacaacaatatctac 12462391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 13026742 - 13026782
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaat 43  Q
    ||||| ||||||||||||||||||| ||||| |||||||||    
T  13026742 tgtatacactcagaacctatttctaacatcagaacaacaat 13026782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 177
Target Start/End: Complemental strand, 13453047 - 13452979
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||||||| ||||||||||| | |||| |||  ||| ||||| |||| |||||||||||||||    
T  13453047 aaaacctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacccttaccttaa 13452979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 21758218 - 21758286
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||||||| ||||||||||| | |||| |||  ||| ||||| |||| |||||||||||||||    
T  21758218 aaaacctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacccttaccttaa 21758286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 35962042 - 35961990
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 55  Q
    ||||||||||||||||||||||||| ||||| ||  ||||| ||||| |||||    
T  35962042 tgtatgcactcagaacctatttctatcatcagaatcacaatctctactctcaa 35961990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 42059382 - 42059414
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaa 35  Q
    ||||||||||||||||||||||||| |||||||    
T  42059382 tgtatgcactcagaacctatttctaacatcaaa 42059414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 46626004 - 46626044
Alignment:
Q  163 tcacccttaccttaattcagaaggagaaatgcaccggaatt 203  Q
    ||||||||| ||||||||||||||| |||||||||| ||||    
T  46626004 tcacccttatcttaattcagaaggaaaaatgcaccgaaatt 46626044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 49159703 - 49159775
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||||||||||| | |||| |||  ||| ||||  |||| |||| ||||||||||||||||| |||||||||||    
T  49159703 caaaatcagaaatcaataactacactattgaactaaacctcactcttaccttaattcagaatgagaaatgcac 49159775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 102; Significance: 1e-50; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 3 - 262
Target Start/End: Complemental strand, 448981 - 448712
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaacc-aagaattcaaaacctaacccaatttcccaatt 100  Q
    |||||||| |||||||||||||||| |||||||||| |||| |||||||||||||||| |||||||| || ||| ||| |   | || || |||||||||    
T  448981 tgtatgcattcagaacctatttctaacatcaaaacagcaatctctacactcaattcactcaaaaacccaataatccaacataaacccaaaattcccaatt 448882  T
Q  101 ttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccgga 200  Q
    |  | | | ||  ||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||  | |    
T  448881 tctaccaataa--cctgttaaatcaaaatcagaattcaatatctattctactgaagcaaacctcacccttacctaaattcagaaggacaaatgcaaagaa 448784  T
Q  201 attggattctcttgg----------ctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaagca 262  Q
    |||||||||||||||          |||||||| ||||||||||||||||||||||||||||||||||||||    
T  448783 attggattctcttggctctacttggctcttctcacttttctcccaaaacttgtctgtttgcacgtaaaagca 448712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 179918 - 179999
Alignment:
Q  115 ctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||||||| ||||||||||| |||  |||||| |||| ||||||||| ||||||||||||||||||||||| | ||||||||    
T  179918 ctgttaaatcaaaatcagaacttagaatctatactacagaagcaaacctcacccttaccttaattcagaagcacaaatgcac 179999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 177
Target Start/End: Complemental strand, 511821 - 511753
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||||||| ||||||||||| |||| | |||| ||||||||| |||| |||||||||||||||    
T  511821 aaaacctgttaaactcaaaatcagaaattaaaacctatactactgaagtaaacctcacccttaccttaa 511753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 96712 - 96775
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcaccaaaaa 66  Q
    ||||||||||||||||||||| ||| ||||| |||||||||  |||| ||||||||||| ||||    
T  96712 tgtatgcactcagaacctattactaacatcagaacaacaattcctaccctcaattcacccaaaa 96775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 15 - 259
Target Start/End: Complemental strand, 8577 - 8324
Alignment:
Q  15 gaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaacc-aagaattcaaaacctaacccaatttcccaattttcatctagaaa 112  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||| |||||||| || ||| ||| |   | || || | ||||||||  | |   | |    
T  8577 gaacctatttctaacatcaaaacaacaatctctacactcaattcactcaaaaacccaataatccaacataaacccaaaatccccaatttctacc---ata 8481  T
Q  113 acctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctct 212  Q
    || ||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||| | |||||||||||||    
T  8480 acttgttaaaccaaaatcagaattcaatatctatactactgaagcaaacctcacccttaccttaattcagaaggacaaatgcacagaaattggattctct 8381  T
Q  213 tgg----------ctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaa 259  Q
    |||          |||||||||||||||||||||||||||||||||| |||||||||    
T  8380 tggctctacttggctcttctcccttttctcccaaaacttgtctgttttcacgtaaaa 8324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 262
Target Start/End: Original strand, 3105 - 3374
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc--aaaaaccaagaattcaaaacctaacccaatttcccaatt 100  Q
    |||||||| |||||||||||||||| |||||||||| |||| |||||| |||||||||   ||||||||| ||| ||| |   | || || |||||||||    
T  3105 tgtatgcattcagaacctatttctaacatcaaaacagcaatctctacaatcaattcactcaaaaaaccaataatccaacataaacccaaaattcccaatt 3204  T
Q  101 ttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccgga 200  Q
    |  | | | ||  ||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||| || |||||||  | |    
T  3205 tctaccaataa--cctgttaaatcaaaatcagaattcaatatctattctactgaagcaaacctcacccttacctcaattcagaacgacaaatgcaaagaa 3302  T
Q  201 attggattct----------cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaagca 262  Q
    |||| |||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3303 attgcattctcttggctctacttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaagca 3374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0661 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0661
Description:

Target: scaffold0661; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 258
Target Start/End: Complemental strand, 3376 - 3111
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaa-gaattcaaaacctaacccaatttcccaatt 100  Q
    |||||||||||| |||||||||||| ||||||| ||   ||  |||||||||||||||| ||||||||| |||||||| |   |||||||  |||  | |    
T  3376 tgtatgcactcaaaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaaaaccaaagaattcaacata-aacccaaaatcctcaat 3278  T
Q  101 ttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccgga 200  Q
    ||| || | ||| ||||||||||||||||||||||| |||| |||| |||||||||||||| ||||||||||||||||||||||||| |||||||| | |    
T  3277 ttcttccataaa-cctgttaaaccaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagaaggacaaatgcacagaa 3179  T
Q  201 attggattctcttgg----------ctcttctcccttttctcccaaaacttgtctgtttgcacgtaaa 258  Q
    |||||||||||||||          ||||||||||||||||| |||||||||| ||||| ||||||||    
T  3178 attggattctcttggctctacttggctcttctcccttttctctcaaaacttgtatgttttcacgtaaa 3111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 258
Target Start/End: Original strand, 18272130 - 18272394
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaacc-aagaattcaaaacctaacccaatttcccaatt 100  Q
    ||||||||  ||||||||||||||| |||||||||| |||| |||||||||||||||| |||||||| || ||| ||| |   | || || | |||||||    
T  18272130 tgtatgcaaccagaacctatttctaacatcaaaacagcaatctctacactcaattcactcaaaaacccaataatacaacataaacccaaaatccccaatt 18272229  T
Q  101 ttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccgga 200  Q
    |  | |   | ||| ||||||| ||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||| |||||| |||||||    |    
T  18272230 tctacc---ataacttgttaaatcaaaatcagaattcaatatctatactactgaagcaaacctcacccttaccttaattcggaaggacaaatgcataaaa 18272326  T
Q  201 attggattct----------cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaa 258  Q
    ||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18272327 attggattctcttggctctacttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaa 18272394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 111 - 240
Target Start/End: Complemental strand, 10783496 - 10783366
Alignment:
Q  111 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaatt-ggattc 209  Q
    |||||||||||||||||||||||||| |||| |||| |||||||||||||| ||||||||||||||||||||| | | ||||||||   ||||  | |||    
T  10783496 aaacctgttaaaccaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagatgaacaaatgcacaacaattctggttc 10783397  T
Q  210 tcttggctcttctcccttttctcccaaaact 240  Q
     ||||||||||||||||||||||||||||||    
T  10783396 acttggctcttctcccttttctcccaaaact 10783366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 117 - 227
Target Start/End: Complemental strand, 15360031 - 15359920
Alignment:
Q  117 gttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctcttgg 215  Q
    |||||||| ||||||| |||| ||||||||| |||||||||||||| ||| ||||||||||| ||||||||| |||||||| | ||||||||||||||||    
T  15360031 gttaaacctaaaatcataattcaatatctatactactgaagcaaacctcatccttaccttaactcagaaggaaaaatgcacagcaattggattctcttgg 15359932  T
Q  216 ctcttctccctt 227  Q
    ||||||||||||    
T  15359931 ctcttctccctt 15359920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 111 - 240
Target Start/End: Complemental strand, 10972147 - 10972017
Alignment:
Q  111 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaatt-ggattc 209  Q
    |||||||||||||||||||||||||| |||| |||| |||||||||||||| ||||||||||||||||||||| | | ||||||||   ||||  | |||    
T  10972147 aaacctgttaaaccaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagatgaacaaatgcacaacaattctggttc 10972048  T
Q  210 tcttggctcttctcccttttctcccaaaact 240  Q
      |||||||||||||||||||||||||||||    
T  10972047 aattggctcttctcccttttctcccaaaact 10972017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 227
Target Start/End: Original strand, 17177210 - 17177434
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaat-ttcccaatt 100  Q
    ||||||||||||||||||||||| | |||||||||| |||| ||||||||||| ||||| ||||||| ||||||||| |   | |||||  ||| |||||    
T  17177210 tgtatgcactcagaacctatttcaaacatcaaaacagcaatctctacactcaaatcacccaaaaacctagaattcaacataaaccccaaaattctcaatt 17177309  T
Q  101 ttcatctagaaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccgg 199  Q
     | |||    ||||||||||||  |||||||||||||  | | ||||  ||||||||||||| |||||||||||||||||||||| || ||||||||       
T  17177310 ct-atcat--aaacctgttaaaatcaaaatcagaattctacaactatattactgaagcaaacctcacccttaccttaattcagaaagacaaatgcacaac 17177406  T
Q  200 aattggattctcttggctcttctccctt 227  Q
     || ||||||||||||||||||||||||    
T  17177407 gatcggattctcttggctcttctccctt 17177434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 227
Target Start/End: Complemental strand, 16228327 - 16228216
Alignment:
Q  116 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctcttgg 215  Q
    |||||||||||||||||||||||||| |||  ||| |||||||||| ||||||||||||||| ||||| | | ||||||||   ||| ||||||||||||    
T  16228327 tgttaaaccaaaatcagaatttaataactacactattgaagcaaacctcacccttaccttaaatcagatgaacaaatgcacaacaatcggattctcttgg 16228228  T
Q  216 ctcttctccctt 227  Q
    ||||||||||||    
T  16228227 ctcttctccctt 16228216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 196
Target Start/End: Complemental strand, 53904553 - 53904473
Alignment:
Q  116 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||||||||||||||||||||| |||| |||  ||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  53904553 tgttaaaccaaaatcagaattcaataactacactattgaagcaaacctcacccttaccttaattcagaaggaaaaatgcac 53904473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 33222220 - 33222302
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||||||||| ||||||||||||| ||| ||||| |||||||||||||| |||||||||||||||||||||| || ||||||||    
T  33222220 ctgttaaacacaaaatcagaattcaatgtctatactactgaagcaaacctcacccttaccttaattcagaatgaaaaatgcac 33222302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 30239887 - 30240079
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaa-cccaatttcccaatt 100  Q
    |||||||||||| |||||||||||| ||||||| ||   ||  |||||||||||||||| |||||||||||||||||  | ||| |||||  |||| | |    
T  30239887 tgtatgcactcaaaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaaaaccaagaattcaa--cttaaacccaaaatccccaat 30239984  T
Q  101 ttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||  | | ||| ||||||||||||||||||||||| || |||||  |||| |||| |||| ||| ||||||||||||||||| | | ||||||||    
T  30239985 ttctaccataaa-cctgttaaaccaaaatcagaattgaaaatctacactaccgaagtaaacctcatccttaccttaattcagatgaacaaatgcac 30240079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 14991837 - 14991765
Alignment:
Q  111 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 183  Q
    |||||||||||| ||||||||||||| || |||||  |||||||||||||| ||||||||||||||| |||||    
T  14991837 aaacctgttaaatcaaaatcagaattaaacatctacactactgaagcaaacctcacccttaccttaaatcaga 14991765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 219
Target Start/End: Original strand, 16485623 - 16485727
Alignment:
Q  115 ctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctcttg 214  Q
    |||||||| |||||||||||||  | |||||| || ||||||||||  ||||||||||||||||||||| | | |||||||| | ||| |||||| ||||    
T  16485623 ctgttaaatcaaaatcagaattagacatctatactgctgaagcaaatatcacccttaccttaattcagatgaacaaatgcacagaaatcggattcacttg 16485722  T
Q  215 gctct 219  Q
    |||||    
T  16485723 gctct 16485727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 212
Target Start/End: Original strand, 7360119 - 7360222
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 208  Q
    |||||||||||||| ||||||||||| | |||| |||  ||| ||||| |||| |||||||||||||||||||||| || |||||||| | || ||||||    
T  7360119 aaaacctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacccttaccttaattcagaatgaaaaatgcacagcaaatggatt 7360218  T
Q  209 ctct 212  Q
    ||||    
T  7360219 ctct 7360222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 15004452 - 15004273
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcaccaa-aaaccaagaattcaaaacctaa-cccaatttcccaatt 100  Q
    |||||||||||| ||||| |||||| ||||||| ||   ||  |||||||||||||||| | |||||||||||||||  | ||| |||||  |||| | |    
T  15004452 tgtatgcactcataacctgtttctaacatcaaaccagtgattcctacactcaattcacccacaaaccaagaattcaa--cttaaacccaaaatccctaat 15004355  T
Q  101 ttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 183  Q
    |||| | | ||| ||||||||| ||||||||||||| || |||||   ||||||||||||| ||||||||||||||| |||||    
T  15004354 ttcaaccataaa-cctgttaaatcaaaatcagaattaaacatctacagtactgaagcaaacctcacccttaccttaaatcaga 15004273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 21882464 - 21882531
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||| ||||||||||| |||||| |||| |||||||||||||| ||||||||||||||    
T  21882464 aaaacctgttaaactcaaaatcagaaattaatagctatactactgaagcaaacctcacccttacctta 21882531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 10783596 - 10783542
Alignment:
Q  1 gatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 55  Q
    ||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||    
T  10783596 gatgtatacactcagaacctatttctaacatcaaaacaacaatctctacactcaa 10783542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 900467 - 900535
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||||||| |||||||| ||||||| |||||| ||||||||| |||| |||||||||||||||    
T  900467 aaaacctgttaaactcaaaatcataatttaaaatctatactactgaagtaaacctcacccttaccttaa 900535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 16157792 - 16157852
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 184  Q
    |||| |||||||| |||| || |||||||||||||||| ||||||||||||||||||||||    
T  16157792 caaattcagaattcaataactgttctactgaagcaaacctcacccttaccttaattcagaa 16157852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 42221303 - 42221371
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    ||||| |||||||| ||||||||||| |||| |||||| |||||||||||||| |||||||||||||||    
T  42221303 aaaacttgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttaccttaa 42221371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 49051918 - 49051990
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 181  Q
    |||||||||||||| ||||||||||||| |||| |||| ||||||||| |||  |||||||||||||||||||    
T  49051918 aaaacctgttaaactcaaaatcagaattcaatacctatactactgaagtaaaactcacccttaccttaattca 49051990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 14063677 - 14063744
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||| |||||||| ||||||||||||| ||||||||| ||| |||||||||| ||||||||||||||    
T  14063677 aaaacgtgttaaactcaaaatcagaattcaatatctatactaatgaagcaaacctcacccttacctta 14063744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 30397027 - 30397090
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    ||||||||| ||||||||||| |||| |||||| |||||||||||||| |||||||||||||||    
T  30397027 ctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttaccttaa 30397090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 10972247 - 10972193
Alignment:
Q  1 gatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 55  Q
    ||||||| |||||| |||||||||||| ||||||||||||||| |||||||||||    
T  10972247 gatgtatacactcaaaacctatttctaacatcaaaacaacaatctctacactcaa 10972193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 19127533 - 19127475
Alignment:
Q  126 aaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 184  Q
    ||||||||| ||||| ||||| ||||||||| |||| ||||||||||||||||||||||    
T  19127533 aaatcagaaattaatgtctatactactgaagtaaacctcacccttaccttaattcagaa 19127475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 33097972 - 33098034
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||| ||||||||||| |||| |||||| |||||||||||||| ||||||||||||||    
T  33097972 ctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttacctta 33098034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 13480241 - 13480151
Alignment:
Q  85 acccaatttcccaattttcatctagaaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||||||||| | |||| || |||||||| ||||||||||| || | |||||| ||||||||| |||| ||||||||||||||    
T  13480241 acccaatttcccaattttcacc-agaacac-tgttaaactcaaaatcagaaattgaaatctatactactgaagtaaacctcacccttacctta 13480151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 18165500 - 18165424
Alignment:
Q  110 aaaacctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 185  Q
    ||||| ||||||||| |||||||||||| |||| |||  ||| |||||||||| |||||||||||||||| ||||||    
T  18165500 aaaacttgttaaacccaaaatcagaattcaataactacactattgaagcaaacctcacccttaccttaatccagaag 18165424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 3259201 - 3259114
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||||||||||||| |||||||||| || |||| |||   |||||| | |||| |||||||||||||||||||||| || ||||||||    
T  3259201 aaaacctgttaaactcaaaatcagacttaaatagctacaatactgaggtaaacctcacccttaccttaattcagaatgaaaaatgcac 3259114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 37882369 - 37882435
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||| ||||||||||||| || |||||| |||||||||||||| ||||| ||||||||    
T  37882369 aaaacctgttaaactcaaaatcagaatt-aacatctatactactgaagcaaacctcaccattacctta 37882435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 212
Target Start/End: Original strand, 52501422 - 52501525
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 208  Q
    |||||||||||||  ||||||||| |||||||| |||   |  ||||| |||| |||||||||||||||||||||| || |||||||| | ||||| |||    
T  52501422 aaaacctgttaaatacaaaatcaggatttaataactacattcttgaagtaaacctcacccttaccttaattcagaatgaaaaatgcacagcaattgaatt 52501521  T
Q  209 ctct 212  Q
    ||||    
T  52501522 ctct 52501525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 3265829 - 3265763
Alignment:
Q  110 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||||||||  |||||||| ||||| |||||| ||| ||||| |||| ||||||||||||||    
T  3265829 aaaacctgttaaactcaaatcagactttaaaatctatactattgaagtaaacctcacccttacctta 3265763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 196
Target Start/End: Complemental strand, 29381968 - 29381886
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||||||||| |||||||||||||||||| |||   || ||||| |||| ||| |||||||||||||||||| || ||||||||    
T  29381968 ctgttaaacacaaaatcagaatttaataactacattattgaagtaaacctcatccttaccttaattcagaatgaaaaatgcac 29381886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 49240054 - 49239988
Alignment:
Q  110 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||||||||  |||||||| ||||| |||||| ||| ||||| |||| ||||||||||||||    
T  49240054 aaaacctgttaaactcaaatcagactttaaaatctatactattgaagtaaacctcacccttacctta 49239988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 49748768 - 49748702
Alignment:
Q  110 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||||||||  |||||||| ||||| |||||| ||| ||||| |||| ||||||||||||||    
T  49748768 aaaacctgttaaactcaaatcagactttaaaatctatactattgaagtaaacctcacccttacctta 49748702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 50083092 - 50083166
Alignment:
Q  110 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 184  Q
    ||||||||||||||  |||||||| ||||| |||||  ||| ||||| |||| |||||||||||||| |||||||    
T  50083092 aaaacctgttaaactcaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttagttcagaa 50083166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 248
Target Start/End: Complemental strand, 14991723 - 14991690
Alignment:
Q  215 gctcttctcccttttctcccaaaacttgtctgtt 248  Q
    ||||||||||||||||||||||||||||||||||    
T  14991723 gctcttctcccttttctcccaaaacttgtctgtt 14991690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 15004235 - 15004198
Alignment:
Q  211 cttggctcttctcccttttctcccaaaacttgtctgtt 248  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  15004235 cttggctcttctcccttttttcccaaaacttgtctgtt 15004198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 198
Target Start/End: Original strand, 26396559 - 26396648
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccg 198  Q
    |||||||||||||| |||||||||| |||||  ||||  | | ||||| ||||  ||||||||||||||||||||| || ||||||||||    
T  26396559 aaaacctgttaaactcaaaatcagactttaaattctacaccattgaagtaaaccccacccttaccttaattcagaatgaaaaatgcaccg 26396648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 5939841 - 5939885
Alignment:
Q  152 tgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||||| |||| |||||||||||||||||||||| |||||||||||    
T  5939841 tgaagtaaacctcacccttaccttaattcagaatgagaaatgcac 5939885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 13454594 - 13454634
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaat 43  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  13454594 tgtatgcactcagaacccatttctaacatcaaaacaacaat 13454634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 45958971 - 45958885
Alignment:
Q  89 aatttcccaattttcatctagaaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||||| | |||| || |||||||| ||||||||||| |||| || ||| ||||||||| |||| ||||||||||||||    
T  45958971 aatttcccaattttcacc-agaacac-tgttaaactcaaaatcagaaattaaaatatatactactgaagtaaacctcacccttacctta 45958885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 54825402 - 54825316
Alignment:
Q  89 aatttcccaattttcatctagaaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||||| | |||| || |||||||| ||||||||||| || | |||||| ||||||||| |||| ||||||||||||||    
T  54825402 aatttcccaattttcacc-agaacac-tgttaaactcaaaatcagaaattgaaatctatactactgaagtaaacctcacccttacctta 54825316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 181
Target Start/End: Original strand, 13454691 - 13454762
Alignment:
Q  111 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 181  Q
    ||||||||||||  ||||| ||||||  ||||||||| ||||||||| |||  |||||||||||||||||||    
T  13454691 aaacctgttaaaatcaaaaccagaatccaatatctatactactgaagtaaaactcacccttaccttaattca 13454762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 20890245 - 20890308
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    ||||||||| ||||||||||| |||||| |||| ||||||||| |||| | |||||||||||||    
T  20890245 ctgttaaacacaaaatcagaaattaatagctatactactgaagtaaacattacccttaccttaa 20890308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 23435189 - 23435122
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||| ||||||||||||||||  ||||  ||| ||||| |||| ||||||||||||||    
T  23435189 aaaacctgttaaactcaaaatcagaatttaaagtctacactattgaagtaaacctcacccttacctta 23435122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 227
Target Start/End: Complemental strand, 39265469 - 39265350
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa-ggagaaatgcaccggaattggat 207  Q
    |||||||||||||| |||||||||||| |||  ||||  ||| ||||| |||| |||||||||||||| || ||||  || |||||||| | ||  | ||    
T  39265469 aaaacctgttaaactcaaaatcagaatctaaagtctacactattgaagtaaacctcacccttaccttagtttagaattgaaaaatgcacagcaaaagaat 39265370  T
Q  208 tctcttggctcttctccctt 227  Q
    |||||||| |||||||||||    
T  39265369 tctcttggttcttctccctt 39265350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 259
Target Start/End: Complemental strand, 634846 - 634812
Alignment:
Q  225 cttttctcccaaaacttgtctgtttgcacgtaaaa 259  Q
    ||||||||||||||||||||||||| |||||||||    
T  634846 cttttctcccaaaacttgtctgttttcacgtaaaa 634812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 11938045 - 11938111
Alignment:
Q  111 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||||||| |||||||||| ||||| ||||| |||| ||||| ||||  |||||||||||||    
T  11938045 aaacctgttaaactcaaaatcagactttaaaatctactctattgaagtaaaccccacccttacctta 11938111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15325737 - 15325791
Alignment:
Q  1 gatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 55  Q
    ||||||||||  ||||||||||||||| ||||||||||||| | ||| |||||||    
T  15325737 gatgtatgcaaccagaacctatttctatcatcaaaacaacagtctctgcactcaa 15325791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 16485511 - 16485568
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac 60  Q
    ||||||||  ||||||||| ||||| ||||||||||  ||| ||||||||||||||||    
T  16485511 tgtatgcaaccagaacctaattctaacatcaaaacagaaatctctacactcaattcac 16485568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 20890143 - 20890176
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaa 36  Q
    ||||||||||||||||||||||||| ||||||||    
T  20890143 tgtatgcactcagaacctatttctaacatcaaaa 20890176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 20895770 - 20895803
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaa 36  Q
    ||||||||||||||||||||||||| ||||||||    
T  20895770 tgtatgcactcagaacctatttctaacatcaaaa 20895803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 26076963 - 26076910
Alignment:
Q  123 ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||||||||||  |||||| ||| |||| ||||| ||||||||||||||    
T  26076963 ccaaaatcagaatttagaatctatactaatgaaccaaacctcacccttacctta 26076910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 31665826 - 31665859
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaa 36  Q
    ||||||||||||||||||||||||| ||||||||    
T  31665826 tgtatgcactcagaacctatttctaacatcaaaa 31665859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 36
Target Start/End: Complemental strand, 42955350 - 42955317
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaa 36  Q
    ||||||||||||||||||||||||| ||||||||    
T  42955350 tgtatgcactcagaacctatttctaacatcaaaa 42955317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 1584781 - 1584849
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||||||| ||||||||||| | |||| |||  ||| ||||| |||| |||||||||||||||    
T  1584781 aaaacctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacccttaccttaa 1584849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 15325835 - 15325899
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacc 173  Q
    ||||||| |||||| ||||||||||||| |  |||||| ||| |||||||||| |||||||||||    
T  15325835 aaaacctattaaactcaaaatcagaattcagaatctatactaatgaagcaaacctcacccttacc 15325899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 16999472 - 16999420
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 55  Q
    ||||||||||||||||||||||||| ||||| ||  ||||| ||||| |||||    
T  16999472 tgtatgcactcagaacctatttctatcatcagaatcacaatctctactctcaa 16999420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 18165596 - 18165548
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacac 51  Q
    ||||||||  ||||||||| ||||| ||||||||||||||| |||||||    
T  18165596 tgtatgcaaccagaacctaattctaacatcaaaacaacaatctctacac 18165548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 42221208 - 42221248
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaat 43  Q
    ||||| ||||||||||||||||||| ||||| |||||||||    
T  42221208 tgtatacactcagaacctatttctaacatcagaacaacaat 42221248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 47870366 - 47870326
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaat 43  Q
    ||||| ||||||||||||||||||| ||||| |||||||||    
T  47870366 tgtatacactcagaacctatttctaacatcagaacaacaat 47870326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 77; Significance: 9e-36; HSPs: 4)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 111 - 259
Target Start/End: Original strand, 30780 - 30927
Alignment:
Q  111 aaacctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaatt-ggatt 208  Q
    |||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||   ||||  | ||    
T  30780 aaacctgttaaacccaaaatcagaattcaatatctatactactgaagcaaacttcacccttaccttaattcagaaagacaaatgcacaacaattcaggtt 30879  T
Q  209 ctcttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaa 259  Q
    | |||||||||||||||||||||||||||||   ||||||| |||||||||    
T  30880 cacttggctcttctcccttttctcccaaaac---tctgttttcacgtaaaa 30927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 116 - 249
Target Start/End: Original strand, 45450 - 45593
Alignment:
Q  116 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattc------ 209  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||  ||||||||||||||||||||| | | || |||||   ||||||||||          
T  45450 tgttaaaccaaaatcagaattcaatatctatactactgaagcaaatctcacccttaccttaattcagacgaacaattgcacgtaaattggattcacttgg 45549  T
Q  210 ----tcttggctcttctcccttttctcccaaaacttgtctgttt 249  Q
         |||||||||||||||||||| ||||||||||||||||||    
T  45550 ctctacttggctcttctcccttttcacccaaaacttgtctgttt 45593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 30673 - 30730
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac 60  Q
    ||||||||  ||||||||||||||| ||||| |||| |||| ||||||||||||||||    
T  30673 tgtatgcaaccagaacctatttctaacatcagaacagcaatctctacactcaattcac 30730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 11495 - 11451
Alignment:
Q  152 tgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||||| |||| |||||||||||||||||||||| || ||||||||    
T  11495 tgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 11451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 116 - 259
Target Start/End: Complemental strand, 2134 - 1981
Alignment:
Q  116 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctcttg- 214  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||| |||| ||  | ||||||||| |||||     
T  2134 tgttaaaccaaaatcagaattcaatatctatactactgaagcaaacctcacccttaccttaattcagaaggacaaatacatagtaattggattatcttgg 2035  T
Q  215 ---------gctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaa 259  Q
             |||||||||||||||||||||||||| |||||||| |||||||||    
T  2034 ctctacttcgctcttctcccttttctcccaaaactagtctgttttcacgtaaaa 1981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 259
Target Start/End: Complemental strand, 14272 - 14017
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaa-ccaagaattcaaaacctaacccaatttcccaatt 100  Q
    |||||||| | |||||||||||||| ||||| ||||  ||| |||||||||||||||| |||||| |||| ||||||| |   |||||||  |||| | |    
T  14272 tgtatgcaatgagaacctatttctaacatcagaacagtaatctctacactcaattcactcaaaaatccaataattcaacata-aacccaaaatccccaat 14174  T
Q  101 ttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccgga 200  Q
    |||  | | ||| ||||||||| ||||||  ||||| || |||||| ||||||||| |||| |||||||||||||||| |||| | | |||||||| | |    
T  14173 ttctacca-aaatcctgttaaatcaaaataggaattcaacatctatactactgaagaaaacctcacccttaccttaatccagatgaacaaatgcacagaa 14075  T
Q  201 attggattctcttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaa 259  Q
    || |||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  14074 atcggattcacttggctcttctcccttttctcccaaaacttgtctattt-cacgtaaaa 14017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 240
Target Start/End: Complemental strand, 2277 - 2039
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaaccaagaattcaaaacctaacccaatttcccaattt 101  Q
    ||||||||  ||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||| || |   | |||||  |||| | ||    
T  2277 tgtatgcaaccagaacctatttctaacatcaaaacaacaatctctacactcaattcactcaaaaaccaagaattaaatataaaccccaaaatccccaatt 2178  T
Q  102 tcatctagaaaacctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccgga 200  Q
      |||    |||||||||||||| |||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||| | |  |||||||   |    
T  2177 ctatcat--aaacctgttaaacccaaaatcagaattcaatatctatactactgaagcaaacctcacccttaccttaattcagacgaacgaatgcacaaca 2080  T
Q  201 att-ggattctcttggctcttctcccttttctcccaaaact 240  Q
    |||  | ||| |||||| |||||||||||| ||||||||||    
T  2079 attctggttcacttggcccttctcccttttatcccaaaact 2039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 8e-33; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 25014419 - 25014601
Alignment:
Q  1 gatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaatttcccaat 99  Q
    |||||||||| |||||||||||||||| ||||||| ||   || ||||||||| ||||||| |||||||||  |  ||||||||||||||| ||||||||    
T  25014419 gatgtatgcaatcagaacctatttctaacatcaaaccagtgatttctacactctattcacccaaaaaccaaagaaccaaaacctaacccaaattcccaat 25014518  T
Q  100 tttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 183  Q
    ||||||  |||| |  ||||||||||||||||||||| || |||||| ||||||||| |||| || |||||||||| |||||||    
T  25014519 tttcatacagaacaa-tgttaaaccaaaatcagaattaaaaatctatactactgaagtaaacctcccccttaccttgattcaga 25014601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 115 - 227
Target Start/End: Complemental strand, 7772877 - 7772764
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctctt 213  Q
    ||||||||| |||||| |||| |||| ||||| ||||||||||||||| |||||||||||||||||||||| || |||||||| | || || ||||||||    
T  7772877 ctgttaaactcaaaattagaaattaacatctactctactgaagcaaacctcacccttaccttaattcagaatgaaaaatgcacagcaaatgaattctctt 7772778  T
Q  214 ggctcttctccctt 227  Q
    || ||| |||||||    
T  7772777 ggttctcctccctt 7772764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 196
Target Start/End: Original strand, 428158 - 428238
Alignment:
Q  116 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||||||||||||||||||||| |||| |||  ||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  428158 tgttaaaccaaaatcagaattcaataactacactattgaagcaaacctcacccttaccttaattcagaaggaaaaatgcac 428238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 177
Target Start/End: Complemental strand, 23443544 - 23443370
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaacc-aagaattcaaaacctaacccaatttcccaatt 100  Q
    ||||||||  ||||||||||||||| |||||||||| |||| |||||||||||||||| |||||||| || ||| ||| |   |||||||  |||| | |    
T  23443544 tgtatgcaaccagaacctatttctaacatcaaaacagcaatctctacactcaattcactcaaaaacccaataatccaacata-aacccaaaatccccaat 23443446  T
Q  101 ttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||  | | | ||||||||||| ||||||||||||| ||||||||| |||| ||||||||| |||||||||||||||    
T  23443445 ttctacca-ataacctgttaaatcaaaatcagaattcaatatctatactaccgaagcaaacctcacccttaccttaa 23443370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 15193311 - 15193131
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcaccaaaaa--ccaagaattcaaaacctaa-cccaatttcccaat 99  Q
    ||||||||||||||||||||||||| ||||||| ||   ||  |||||||||||||||| ||||  ||||||||||||  | ||| |||||  |||| |     
T  15193311 tgtatgcactcagaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaaaacccaagaattcaa--cttaaacccaaaatccccaa 15193214  T
Q  100 tttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 183  Q
    || |  | | ||| ||||||||||||||||||||||| || |||||  ||||||||| |||| |||||||||||||||||||||    
T  15193213 ttcctaccataaa-cctgttaaaccaaaatcagaattaaacatctacactactgaagtaaacctcacccttaccttaattcaga 15193131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 21889529 - 21889601
Alignment:
Q  111 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 183  Q
    |||||||||||||||||||||||||| || |||||  ||||||||| |||| |||||||||||||||||||||    
T  21889529 aaacctgttaaaccaaaatcagaattaaaaatctacactactgaagtaaacctcacccttaccttaattcaga 21889601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 18819745 - 18819923
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaatttcccaattt 101  Q
    ||||||||  ||||||||||||||| ||  ||||||   ||  |||||||||||||||| |||||||||  | |||||| ||||||||||||||||| ||    
T  18819745 tgtatgcaaccagaacctatttctaacactaaaacagtgattcctacactcaattcacccaaaaaccaatgaatcaaaatctaacccaatttcccaa-tt 18819843  T
Q  102 tcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 183  Q
    ||  | || |||| |||||||||||| |||||| |||  |||||  | | |||||||||| |||||||||||||||||||||    
T  18819844 tctaccag-aaacatgttaaaccaaattcagaa-ttacaatctacaccattgaagcaaacctcacccttaccttaattcaga 18819923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 240
Target Start/End: Original strand, 21830469 - 21830601
Alignment:
Q  111 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattc 209  Q
    ||||||||||||  ||||||||||||| | || |||  ||| |||||||||  |||||||||||||||||||||| || ||||||||   |||| |||||    
T  21830469 aaacctgttaaaatcaaaatcagaattcattaactacactattgaagcaaatctcacccttaccttaattcagaaagacaaatgcacatcaatttgattc 21830568  T
Q  210 tcttggctcttct--cccttttctcccaaaact 240  Q
    |||||||||| ||  | ||||||||||||||||    
T  21830569 tcttggctctacttgctcttttctcccaaaact 21830601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 19363502 - 19363583
Alignment:
Q  115 ctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||||||| ||||||||||| |||  |||||| |||| ||||||||| ||||| ||||||||||||||||| | ||||||||    
T  19363502 ctgttaaatcaaaatcagaacttagaatctatactacagaagcaaacctcaccgttaccttaattcagaagcacaaatgcac 19363583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 20844004 - 20844073
Alignment:
Q  116 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 185  Q
    |||||||||||||||||||||||||| |||   || |||||||||| |||| ||||||||||||||||||    
T  20844004 tgttaaaccaaaatcagaatttaataactacattattgaagcaaacctcactcttaccttaattcagaag 20844073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 177
Target Start/End: Complemental strand, 23544096 - 23544028
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||| ||||||||| |||||||||||||||  |||||| |||||||||||||| |||||||||||||||    
T  23544096 aaaaactgttaaactcaaaatcagaatttagaatctatactactgaagcaaacctcacccttaccttaa 23544028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 19799106 - 19799040
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||| ||||||||||||| || |||||| |||||||||||||| ||||||||||||||    
T  19799106 aaaacctgttaaactcaaaatcagaatt-aacatctatactactgaagcaaacctcacccttacctta 19799040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 215
Target Start/End: Original strand, 22501865 - 22501956
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctcttgg 215  Q
    |||| |||||| ||||  ||||| ||||||||| |||| |||||||||||||||||||||| || |||||||| | ||  ||||||||||||    
T  22501865 caaattcagaaattaaagtctatactactgaagtaaacctcacccttaccttaattcagaatgaaaaatgcacagcaaaaggattctcttgg 22501956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 25420749 - 25420812
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    ||||||||| ||||||||||| ||||| ||||| |||||||||||||| |||||||||||||||    
T  25420749 ctgttaaactcaaaatcagaaattaatgtctatactactgaagcaaacctcacccttaccttaa 25420812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 30781939 - 30782026
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||||||||||||| |||||||||||| ||| |||||  ||| ||||| |||| |||||||||||||| ||||||| || ||||||||    
T  30781939 aaaacctgttaaactcaaaatcagaatctaaaatctacactattgaagtaaacctcacccttaccttagttcagaatgaaaaatgcac 30782026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 23075521 - 23075459
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||| ||||||||||| |||| |||||| |||||||||||||| ||||||||||||||    
T  23075521 ctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttacctta 23075459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 23081234 - 23081172
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||| ||||||||||| |||| |||||| |||||||||||||| ||||||||||||||    
T  23081234 ctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttacctta 23081172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 227
Target Start/End: Complemental strand, 28259138 - 28259044
Alignment:
Q  133 aatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctcttggctcttctccctt 227  Q
    ||||| |||||||| ||||||||| |||  |||| ||||||||||||||||| || |||||||  | || |||||||||||||  ||||||||||    
T  28259138 aatttcatatctatactactgaagtaaaactcactcttaccttaattcagaatgaaaaatgcaaagcaaatggattctcttggtccttctccctt 28259044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 6403812 - 6403759
Alignment:
Q  1 gatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactca 54  Q
    ||||||||||||||||||||||||||| ||||| |||||||||  |||||||||    
T  6403812 gatgtatgcactcagaacctatttctaacatcagaacaacaattcctacactca 6403759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 598148 - 598220
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||||||||||| | |||| |||  ||| ||||| |||| |||||||||||||||||||||| |||||||||||    
T  598148 caaaatcagaaatcaataactacactattgaagtaaacctcacccttaccttaattcagaatgagaaatgcac 598220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 18567462 - 18567530
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||||||| ||||||||||| |||| | |||| ||||||||| |||| |||||||||||||||    
T  18567462 aaaacctgttaaactcaaaatcagaaattaaaacctatactactgaagtaaacctcacccttaccttaa 18567530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 177
Target Start/End: Complemental strand, 18940450 - 18940382
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||||||| ||||||||||| |||||| |||  ||| |||||||||| |||||||||||||||    
T  18940450 aaaacctgttaaactcaaaatcagaaattaataactacactattgaagcaaacctcacccttaccttaa 18940382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 22006940 - 22006880
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 184  Q
    |||| |||||||| ||||  | |||||||||||||||| ||||||||||||||||||||||    
T  22006940 caaattcagaattcaataattgttctactgaagcaaacctcacccttaccttaattcagaa 22006880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 22508446 - 22508518
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||| |||||| ||||  ||||| ||||||||| |||| |||||||||||||||||||||| || ||||||||    
T  22508446 caaattcagaaattaaagtctatactactgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 22508518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 23560808 - 23560732
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 185  Q
    ||||| |||||||| |||||||||||||||| | |||  ||| |||||||||| |||||||||| ||||||||||||    
T  23560808 aaaacttgttaaactcaaaatcagaatttaaaaactacactattgaagcaaacctcacccttacattaattcagaag 23560732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 27635075 - 27635023
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||||| |||||| |||| ||||||||| ||||||||||||||    
T  27635075 caaaatcagaatttaacatctatactaccgaagcaaacctcacccttacctta 27635023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 5455361 - 5455436
Alignment:
Q  110 aaaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 184  Q
    ||||||||||||| ||||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||| |||||||    
T  5455361 aaaacctgttaaaaccaaaatcagactttaaaatctacactaatgaagtaaacctcacccttaccttagttcagaa 5455436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 14881549 - 14881462
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||||||||||||| |||||||||| |||||| ||||  ||| ||||| ||||  ||||||||||||| ||||||| || ||||||||    
T  14881549 aaaacctgttaaactcaaaatcagactttaatttctacactattgaagtaaaccccacccttaccttagttcagaatgaaaaatgcac 14881462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 14888226 - 14888139
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||||||||||||| |||||||||| |||||| ||||  ||| ||||| ||||  ||||||||||||| ||||||| || ||||||||    
T  14888226 aaaacctgttaaactcaaaatcagactttaatttctacactattgaagtaaaccccacccttaccttagttcagaatgaaaaatgcac 14888139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 19509040 - 19509127
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||||||||||||| ||||||||||| | |||| |||   || ||||| |||| |||||||||||||||||||||| || ||||||||    
T  19509040 aaaacctgttaaactcaaaatcagaaatcaataactacattattgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 19509127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 24058523 - 24058586
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    ||||||||| ||||| ||||| ||||| ||||| |||||||||||||| |||||||||||||||    
T  24058523 ctgttaaactcaaaagcagaaattaatgtctatactactgaagcaaacctcacccttaccttaa 24058586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 10687018 - 10687092
Alignment:
Q  110 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 184  Q
    ||||||||||||||  |||||||| ||||| |||||  ||| ||||| |||| |||||||||||||| |||||||    
T  10687018 aaaacctgttaaactcaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttagttcagaa 10687092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 16774284 - 16774222
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||| ||||||||||| |||| |||||| |||||||||||||| ||| ||||||||||    
T  16774284 ctgttaaacacaaaatcagaaattaaaatctatactactgaagcaaacctcatccttacctta 16774222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 25847214 - 25847296
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||||||||| |||||||||||||||||| |||   |  ||||| |||| |||||||||||||||||||||| || ||||||||    
T  25847214 ctgttaaacacaaaatcagaatttaataactacattcttgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 25847296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 25853795 - 25853877
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||||||||| |||||||||||||||||| |||   |  ||||| |||| |||||||||||||||||||||| || ||||||||    
T  25853795 ctgttaaacacaaaatcagaatttaataactacattcttgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 25853877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 30344767 - 30344697
Alignment:
Q  117 gttaaaccaaaatcagaatt-taata-tctattctactgaagcaaacttcacccttaccttaattcagaag 185  Q
    |||||||||||||||||||| ||||| ||||  ||| |||||||||| |||||||||||| ||||||||||    
T  30344767 gttaaaccaaaatcagaattataataatctacactattgaagcaaacctcacccttacctgaattcagaag 30344697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 5337590 - 5337518
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 181  Q
    |||||||||||||| | || ||||||||| |||||||| ||||||||| |||   ||||||||||||||||||    
T  5337590 aaaacctgttaaactccaattcagaatttcatatctatactactgaagtaaaacccacccttaccttaattca 5337518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 7772978 - 7772938
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaat 43  Q
    ||||| ||||||||||||||||||| |||||||||||||||    
T  7772978 tgtatacactcagaacctatttctaacatcaaaacaacaat 7772938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 20991127 - 20991167
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaat 43  Q
    ||||| ||||||||||||||||||| |||||||||||||||    
T  20991127 tgtatacactcagaacctatttctaacatcaaaacaacaat 20991167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 39608090 - 39608038
Alignment:
Q  125 aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||| ||||| |||||  ||||||||||||| |||||||||||||||    
T  39608090 aaaatcagaaattaatgtctataatactgaagcaaacctcacccttaccttaa 39608038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 22247473 - 22247386
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||||||||||||| |||||||||| |||||  ||||  | | ||||| ||||  ||||||||||||||||||||| || ||||||||    
T  22247473 aaaacctgttaaactcaaaatcagactttaaattctacaccattgaagtaaaccccacccttaccttaattcagaatgaaaaatgcac 22247386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 24008926 - 24009001
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 184  Q
    |||||||||||||| |||| ||||| ||||| |||||  ||| ||||| |||| |||||||||||||| |||||||    
T  24008926 aaaacctgttaaactcaaattcagactttaaaatctacactattgaagtaaacctcacccttaccttagttcagaa 24009001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 33536967 - 33537034
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||| ||||||||||| | |||| |||| ||| ||||| |||| ||||||||||||||    
T  33536967 aaaacctgttaaactcaaaatcagaaatcaataactatactattgaagtaaacctcacccttacctta 33537034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 20991228 - 20991290
Alignment:
Q  115 ctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||| |||||  ||| |||| ||||| ||||||||||||||| ||||||||||||||    
T  20991228 ctgttaaacccaaaatttgaaattaacatctactctactgaagcaaacctcacccttacctta 20991290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 24668222 - 24668156
Alignment:
Q  117 gttaaaccaaaatcagaatt-taata-tctattctactgaagcaaacttcacccttaccttaattca 181  Q
    |||||||||||||||||||| ||||| ||||  ||| |||||||||| |||||||||||| ||||||    
T  24668222 gttaaaccaaaatcagaattataataatctacactattgaagcaaacctcacccttacctgaattca 24668156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 24736817 - 24736751
Alignment:
Q  117 gttaaaccaaaatcagaatt-taata-tctattctactgaagcaaacttcacccttaccttaattca 181  Q
    |||||||||||||||||||| ||||| ||||  ||| |||||||||| |||||||||||| ||||||    
T  24736817 gttaaaccaaaatcagaattataataatctacactattgaagcaaacctcacccttacctgaattca 24736751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 24737991 - 24737925
Alignment:
Q  117 gttaaaccaaaatcagaatt-taata-tctattctactgaagcaaacttcacccttaccttaattca 181  Q
    |||||||||||||||||||| ||||| ||||  ||| |||||||||| |||||||||||| ||||||    
T  24737991 gttaaaccaaaatcagaattataataatctacactattgaagcaaacctcacccttacctgaattca 24737925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 24750760 - 24750694
Alignment:
Q  117 gttaaaccaaaatcagaatt-taata-tctattctactgaagcaaacttcacccttaccttaattca 181  Q
    |||||||||||||||||||| ||||| ||||  ||| |||||||||| |||||||||||| ||||||    
T  24750760 gttaaaccaaaatcagaattataataatctacactattgaagcaaacctcacccttacctgaattca 24750694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27635188 - 27635146
Alignment:
Q  1 gatgtatgcactcagaacctatttctaccatcaaaacaacaat 43  Q
    |||||||| |||||||||||||||||| ||||| |||||||||    
T  27635188 gatgtatgtactcagaacctatttctaacatcagaacaacaat 27635146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 43029915 - 43029981
Alignment:
Q  110 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||||||||  |||||||| ||||| |||||  ||| ||||| |||| ||||||||||||||    
T  43029915 aaaacctgttaaactcaaatcagactttaaaatctacactattgaagtaaacctcacccttacctta 43029981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 17938112 - 17938047
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaatt 179  Q
    ||||||||| ||||||||||| | |||| ||||  |||||||| |||| |||||||||||||||||    
T  17938112 ctgttaaacacaaaatcagaaatcaataactatattactgaagaaaacctcacccttaccttaatt 17938047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 21495838 - 21495910
Alignment:
Q  111 aaacctgttaaaccaaaatcagaatttaatatctattctactg-aagcaaacttcacccttaccttaattcaga 183  Q
    ||||| |||||||||||||||||| |||  |||||| ||| || ||| |||| |||||||||||||||||||||    
T  21495838 aaaccggttaaaccaaaatcagaa-ttacaatctatactattgaaagtaaacctcacccttaccttaattcaga 21495910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 22501754 - 22501787
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaa 36  Q
    ||||||||||||||||||||||||| ||||||||    
T  22501754 tgtatgcactcagaacctatttctaacatcaaaa 22501787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 22508335 - 22508368
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaa 36  Q
    ||||||||||||||||||||||||| ||||||||    
T  22508335 tgtatgcactcagaacctatttctaacatcaaaa 22508368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 36
Target Start/End: Complemental strand, 29745925 - 29745892
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaa 36  Q
    ||||||||||||||||||||||||| ||||||||    
T  29745925 tgtatgcactcagaacctatttctaacatcaaaa 29745892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 15462344 - 15462412
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||||||  |||||||||||||||||| |||  ||  ||||| |||| |||||||||||||||    
T  15462344 aaaacctgttaaatacaaaatcagaatttaataactacactcttgaagtaaacctcacccttaccttaa 15462412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 19801228 - 19801188
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaat 43  Q
    ||||| ||||||||||||||||||| ||||| |||||||||    
T  19801228 tgtatacactcagaacctatttctaacatcagaacaacaat 19801188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 20341411 - 20341479
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||||||  |||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||||    
T  20341411 aaaacctgttaaattcaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttaa 20341479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 20348015 - 20348083
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||||||  |||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||||    
T  20348015 aaaacctgttaaattcaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttaa 20348083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 25420647 - 25420687
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaat 43  Q
    ||||| ||||||||||||||||||| ||||| |||||||||    
T  25420647 tgtatacactcagaacctatttctaacatcagaacaacaat 25420687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 29745814 - 29745762
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||| |||||| |||| |||||| ||||||||| |||| ||||||||||||||    
T  29745814 caaattcagaaattaaaatctatactactgaagtaaacctcacccttacctta 29745762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 258
Target Start/End: Original strand, 19036456 - 19036613
Alignment:
Q  112 aacctgttaaaccaaaa-tcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattct 210  Q
    ||||||||||| ||||| |||||||| |||| |||| |||||||||||||| ||||||||||||||||||||||||| |||||||| | |||||| ||||    
T  19036456 aacctgttaaatcaaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagaaggacaaatgcactgaaattggtttct 19036555  T
Q  211 ----------cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaa 258  Q
              ||||||||||||||||||||||||||||||||||||| | ||||||||    
T  19036556 cttggctctacttggctcttctcccttttctcccaaaacttgtctgtgttcacgtaaa 19036613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 111 - 241
Target Start/End: Complemental strand, 8889172 - 8889040
Alignment:
Q  111 aaacctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaatt-ggatt 208  Q
    |||||||||||||| |||||||||||| |||| |||| |||||||||||||| ||||||||||||||||| ||||||| ||||||||   ||||  | ||    
T  8889172 aaacctgttaaacccaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaatttagaaggacaaatgcacatcaattcaggtt 8889073  T
Q  209 ctcttggctcttctcccttttctcccaaaactt 241  Q
    | ||||| |||||||||||||||||||||||||    
T  8889072 cacttggttcttctcccttttctcccaaaactt 8889040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 227
Target Start/End: Complemental strand, 25106779 - 25106554
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaaaacctaaccc-aatttcccaatt 100  Q
    ||||||||||||||||||||||||  |||||||||| |||| ||||||||||| ||| ||||||||| ||||||||| |   | ||| || |||||||||    
T  25106779 tgtatgcactcagaacctatttctgacatcaaaacagcaatctctacactcaaatcacccaaaaacctagaattcaacataaaccccaaaattcccaatt 25106680  T
Q  101 ttcatctagaaaacctgttaaa--ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccg 198  Q
    ||  | |   ||||||||||||  | |||||||||||| |  |||||  ||||||||| |||| |||||||||||||||||||||| || || |||||      
T  25106679 ttattat---aaacctgttaaaatcaaaaatcagaattaagcatctacactactgaagtaaacctcacccttaccttaattcagaaagacaattgcacaa 25106583  T
Q  199 gaattggattctcttggctcttctccctt 227  Q
      || ||||||| ||||||||||||||||    
T  25106582 tgatcggattcttttggctcttctccctt 25106554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 20648940 - 20649135
Alignment:
Q  1 gatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaaccaagaattcaaaacctaacccaat-ttcccaa 98  Q
    ||||||||||  ||||||||| ||||| ||||| ||||||||| |||| ||||||||||| |||||||| | ||| ||| |   | |||||  |||||||    
T  20648940 gatgtatgcaaccagaacctaattctaacatcagaacaacaatttctatactcaattcactcaaaaacccataatccaacataaaccccaaaattcccaa 20649039  T
Q  99 ttttcatctagaaaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    || | |||    |||||||||||| |||||||||||||| |||| |||| |||||||||||||| |||||||||||||||||||||| || ||||||||    
T  20649040 ttct-atcat--aaacctgttaaatccaaaatcagaattaaataactatactactgaagcaaacctcacccttaccttaattcagaaagacaaatgcac 20649135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 23753654 - 23753729
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattca 77  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| ||||||||| ||||||||    
T  23753654 tgtatgcactcagaacctatttctaacatcagaacaacaatttctacactcaattcacccaaaaacctagaattca 23753729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 187
Target Start/End: Original strand, 25268068 - 25268252
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaaccaagaattcaaaacctaaccc--aatttcccaat 99  Q
    ||||||||  ||||||||||||||| ||||| |||| |||| | |||||||||||||| |||||||| |  | || || | ||||||  |||||||||||    
T  25268068 tgtatgcaaccagaacctatttctaacatcagaacatcaatctatacactcaattcactcaaaaacccattaatccaa-cataaccccaaatttcccaat 25268166  T
Q  100 tttcatctagaaaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaagga 187  Q
    | | |||    |||||||||||| |||||||||||||| || | |||| |||||||||||||| |||||||||||||||||||||||||    
T  25268167 tct-atcat--aaacctgttaaatccaaaatcagaattcaaaaactatactactgaagcaaacctcacccttaccttaattcagaagga 25268252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 20913530 - 20913463
Alignment:
Q  116 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 183  Q
    |||||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||| |||||    
T  20913530 tgttaaaccaaaatcagaatttaaaatctatactactgaagtaaacctcacccttaccttaaatcaga 20913463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 212
Target Start/End: Complemental strand, 22012345 - 22012242
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 208  Q
    |||||||||||||| ||||||||||| | |||| |||  ||| ||||| |||| |||||||||||||||||||||| || |||||||| | || ||||||    
T  22012345 aaaacctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacccttaccttaattcagaatgaaaaatgcacagcaaatggatt 22012246  T
Q  209 ctct 212  Q
    ||||    
T  22012245 ctct 22012242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 23291897 - 23291963
Alignment:
Q  111 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||||||  ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  23291897 aaacctgttaaaatcaaaatcagaattcaatatctatactactgaagcaaacctcacccttacctta 23291963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 23333537 - 23333603
Alignment:
Q  111 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||||||  ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  23333537 aaacctgttaaaatcaaaatcagaattcaatatctatactactgaagcaaacctcacccttacctta 23333603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 227
Target Start/End: Original strand, 22860941 - 22861058
Alignment:
Q  111 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattc 209  Q
    ||||||||||||  ||||||||||||| || | ||||  ||||||||||||  |||||||||||||||||||||| || ||||| ||    || |||||     
T  22860941 aaacctgttaaaatcaaaatcagaattcaacaactatattactgaagcaaatctcacccttaccttaattcagaaagacaaatgtacaacgatcggatta 22861040  T
Q  210 tcttggctcttctccctt 227  Q
    |||| |||||||||||||    
T  22861041 tctttgctcttctccctt 22861058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 35243768 - 35243683
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgc 194  Q
    |||||||||||||| ||||||||||| | |||| |||  ||| ||||| |||| |||||||||||||||||||||| || ||||||    
T  35243768 aaaacctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacccttaccttaattcagaatgaaaaatgc 35243683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 25174862 - 25174906
Alignment:
Q  141 atctattctactgaagcaaacttcacccttaccttaattcagaag 185  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  25174862 atctatactactgaagcaaacctcacccttaccttaattcagaag 25174906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 32910696 - 32910624
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 181  Q
    |||||||||||||| | || ||||||||| |||||||| ||||||||| |||  |||||||||||||||||||    
T  32910696 aaaacctgttaaactccaattcagaatttcatatctatactactgaagtaaaactcacccttaccttaattca 32910624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 22812954 - 22813021
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||| ||||||||||||| |  |||||| ||| |||||||||| ||||||||||||||    
T  22812954 aaaacctgttaaactcaaaatcagaattcagaatctatactaatgaagcaaacctcacccttacctta 22813021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 23887599 - 23887512
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||||||||||||| |||||||||| |||||| ||||  ||| ||||| ||||  ||||||||||||| ||||||| || ||||||||    
T  23887599 aaaacctgttaaactcaaaatcagactttaatttctacactattgaagtaaaccccacccttaccttagttcagaatgaaaaatgcac 23887512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 14564760 - 14564822
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||| ||||||||||| ||||| ||||| ||||||||| |||| ||||||||||||||    
T  14564760 ctgttaaactcaaaatcagaaattaatgtctatactactgaagtaaacctcacccttacctta 14564822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 17582687 - 17582617
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 184  Q
    ||||||||| |||| |||||| |||| |||||| ||| ||||| |||| ||||||||||||||||||||||    
T  17582687 ctgttaaactcaaactcagaaattaaaatctatactattgaagtaaacctcacccttaccttaattcagaa 17582617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 22860834 - 22860900
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaacc 68  Q
    ||||||||  ||||||||| ||||| ||||| ||||||||| |||||||||||||||| ||||||||    
T  22860834 tgtatgcaaccagaacctaattctaacatcagaacaacaatctctacactcaattcactcaaaaacc 22860900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 177
Target Start/End: Complemental strand, 15642505 - 15642437
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||||||| || |||||||| |||||| |||| ||| ||||| |||| |||||||||||||||    
T  15642505 aaaacctgttaaactcacaatcagaaattaataactatactattgaagtaaacctcacccttaccttaa 15642437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 19648744 - 19648688
Alignment:
Q  125 aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 181  Q
    |||||||||||  ||||||||| ||||||||| |||  |||||||||||||||||||    
T  19648744 aaaatcagaatccaatatctatactactgaagtaaaactcacccttaccttaattca 19648688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 20851116 - 20851184
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||||||| |||||||||||||||| |||||  ||| ||||| ||||  ||||||||||||||    
T  20851116 aaaacctgttaaactcaaaatcagaatttaacatctacactattgaagtaaaccccacccttaccttaa 20851184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 28970468 - 28970416
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||||| | |||| |||| ||||||||| ||||||||||||||    
T  28970468 caaaatcagaatttaacacctatactaccgaagcaaacatcacccttacctta 28970416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 21605670 - 21605757
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||||||||||||| |||||||||| |||||  ||||  | | ||||| ||||  ||||||||||||||||||||| || ||||||||    
T  21605670 aaaacctgttaaactcaaaatcagactttaaattctacaccattgaagtaaaccccacccttaccttaattcagaatgaaaaatgcac 21605757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 27038168 - 27038235
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||| |||||||||||| ||| |||||  ||| ||||| |||| ||||||||||||||    
T  27038168 aaaacctgttaaactcaaaatcagaatctaaaatctacactattgaagtaaacctcacccttacctta 27038235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 30195715 - 30195652
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    ||||||||| |||||||||||||||| |||||  ||| ||||| |||| |||||||||||||||    
T  30195715 ctgttaaacacaaaatcagaatttaaaatctacactattgaagtaaacctcacccttaccttaa 30195652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 8889279 - 8889222
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac 60  Q
    ||||||||  || |||||||||||  |||||||||| |||| ||||||||||||||||    
T  8889279 tgtatgcaaccataacctatttctcacatcaaaacagcaatctctacactcaattcac 8889222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 27272979 - 27273012
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaa 36  Q
    ||||||||||||||||||||||||| ||||||||    
T  27272979 tgtatgcactcagaacctatttctaacatcaaaa 27273012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 45029344 - 45029401
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 181  Q
    ||||||||||  ||||| ||||| |||||||||||||  |||||||||||| ||||||    
T  45029344 caaaatcagagattaatgtctatactactgaagcaaatctcacccttacctgaattca 45029401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 19648856 - 19648816
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaat 43  Q
    |||||| |||||||||| ||||||| |||||||||||||||    
T  19648856 tgtatgtactcagaacccatttctaacatcaaaacaacaat 19648816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 27366601 - 27366549
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||| ||||||||||||| ||||  ||||||||||||  ||||||||||||||    
T  27366601 caaattcagaatttaataactatattactgaagcaaatctcacccttacctta 27366549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 28970579 - 28970539
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaat 43  Q
    |||||| |||||||||||||||||| ||||| |||||||||    
T  28970579 tgtatgtactcagaacctatttctaacatcagaacaacaat 28970539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 111 - 240
Target Start/End: Original strand, 21699070 - 21699200
Alignment:
Q  111 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaatt-ggattc 209  Q
    |||||||||||||||||||||||||| || |||||| |||||||||||||| ||||||||||||||||||||| | | | |||||| | ||||  | |||    
T  21699070 aaacctgttaaaccaaaatcagaattaaacatctatactactgaagcaaacctcacccttaccttaattcagatgaacagatgcacagaaattctggttc 21699169  T
Q  210 tcttggctcttctcccttttctcccaaaact 240  Q
     ||||||||||||||||||||||||||||||    
T  21699170 acttggctcttctcccttttctcccaaaact 21699200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 259
Target Start/End: Original strand, 19336630 - 19336897
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcaccaaaaa--ccaagaattcaaaacctaacccaatttcccaatt 100  Q
    ||||||||||||||||||||||||| ||||||| ||   ||  |||||||||||||||| ||||  |||||||||||| |   |||||||  |||| | |    
T  19336630 tgtatgcactcagaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaaaacccaagaattcaacata-aacccaaaatccccaat 19336728  T
Q  101 ttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccgga 200  Q
    |||  | | ||| ||||||||||||||||||||||| ||  ||||| |||||||||||||| ||||||||||||||||||||| | | ||||||||   |    
T  19336729 ttctaccataaa-cctgttaaaccaaaatcagaattaaacctctatactactgaagcaaacctcacccttaccttaattcagatgaacaaatgcacacaa 19336827  T
Q  201 at-tggat--------tct-cttggctcttct-cccttttctcccaaaacttgtctgtttgcacgtaaaa 259  Q
    || ||| |        ||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19336828 atctggttcccttggctctacttggctcttctccccttttctcccaaaacttgtctgtttgcacgtaaaa 19336897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 31926626 - 31926445
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaacc-aagaattcaaaacctaacccaatttcccaatt 100  Q
    ||||||||||||||||||||||||| ||||||||||  ||| |||||||||||||||| |||||||| || | ||||| |   | |||||  |||| | |    
T  31926626 tgtatgcactcagaacctatttctaacatcaaaacagtaatttctacactcaattcactcaaaaacccaatagttcaacataaaccccaaaatccccaat 31926527  T
Q  101 ttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 183  Q
    |||  | | ||| ||||||||| ||||||||||||| || |||||  |||||||||||||| |||||||||||||||||||||    
T  31926526 ttctaccataaa-cctgttaaatcaaaatcagaattaaacatctacactactgaagcaaacctcacccttaccttaattcaga 31926445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 111 - 187
Target Start/End: Complemental strand, 21409881 - 21409804
Alignment:
Q  111 aaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaagga 187  Q
    |||||||||||| |||||||||||||| |||| |||| |||||||||||||| |||||||||||||||||||||||||    
T  21409881 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagaagga 21409804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 259
Target Start/End: Complemental strand, 30490758 - 30490493
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaa-gaattcaaaacctaacccaatttcccaatt 100  Q
    |||||||||||||||| |||||||| ||||||| ||   ||  |||||||||||||||| ||||||||| |||||||| |  ||||||||  |||| |      
T  30490758 tgtatgcactcagaacttatttctaacatcaaaccagtgattcctacactcaattcacccaaaaaccaaagaattcaaca--taacccaaaatccccaaa 30490661  T
Q  101 ttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccgga 200  Q
    |||  | | ||| ||||||||||||||||||||||| || |||||  ||||||||| |||| ||||||||||||||||||||  | | || |||||   |    
T  30490660 ttctaccataaa-cctgttaaaccaaaatcagaattaaacatctacactactgaagtaaacctcacccttaccttaattcagttgaacaattgcacaaaa 30490562  T
Q  201 at-tggat--------tct-cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaa 259  Q
    || ||| |        ||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30490561 atctggttcacttggctctacttggctcttctcccttttcttccaaaacttgtctgtttgcacgtaaaa 30490493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 116 - 227
Target Start/End: Complemental strand, 11140315 - 11140204
Alignment:
Q  116 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctcttgg 215  Q
    |||| |||||||||||||||| |||| |||  ||| |||||||||| ||||||||||||||| ||||| | |  |||||||   ||||||||||||||||    
T  11140315 tgttgaaccaaaatcagaattgaataactacactattgaagcaaacctcacccttaccttaaatcagatgaacgaatgcacaacaattggattctcttgg 11140216  T
Q  216 ctcttctccctt 227  Q
    ||||||||||||    
T  11140215 ctcttctccctt 11140204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 20850006 - 20850080
Alignment:
Q  118 ttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaat 192  Q
    |||| |||||||||||||| |||| |||| |||||||||||||| ||||||||||||||||||||||||| ||||    
T  20850006 ttaatccaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagaaggacaaat 20850080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 111 - 181
Target Start/End: Original strand, 23713167 - 23713237
Alignment:
Q  111 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 181  Q
    ||||||||||||||||||||| |||| || |||||| |||||||||||||| |||||||||||||||||||    
T  23713167 aaacctgttaaaccaaaatcataattaaaaatctatactactgaagcaaacctcacccttaccttaattca 23713237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 36615856 - 36615937
Alignment:
Q  115 ctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||||||| ||||||||||| |||  |||||| |||||||||||||| ||||||||||||||||||||||| | ||||||||    
T  36615856 ctgttaaatcaaaatcagaacttagaatctatactactgaagcaaacctcacccttaccttaattcagaagcacaaatgcac 36615937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 43089307 - 43089388
Alignment:
Q  115 ctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||||||| ||||||||||| |||  |||||| |||||||||||||| ||||||||||||||||||||||| | ||||||||    
T  43089307 ctgttaaatcaaaatcagaacttagaatctatactactgaagcaaacctcacccttaccttaattcagaagcacaaatgcac 43089388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 110 - 227
Target Start/End: Original strand, 21921717 - 21921835
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 208  Q
    |||||||||||||| | || ||||||||| ||| ||||  |||||||| |||  |||||||||||||||||||||| || |||||||| | || ||||||    
T  21921717 aaaacctgttaaactccaattcagaatttcataactatattactgaagtaaaactcacccttaccttaattcagaatgaaaaatgcacagcaaatggatt 21921816  T
Q  209 ctcttggctcttctccctt 227  Q
    ||||||| ||| |||||||    
T  21921817 ctcttggttctcctccctt 21921835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 29601484 - 29601378
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 208  Q
    |||||||||||||| | || ||||||||| ||| |||| ||||||||| |||  |||||||||||||||||||||| || |||||||| | || ||||||    
T  29601484 aaaacctgttaaactccaattcagaatttcataactatactactgaagtaaaactcacccttaccttaattcagaatgaaaaatgcacagcaaatggatt 29601385  T
Q  209 ctcttgg 215  Q
    |||||||    
T  29601384 ctcttgg 29601378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 15315713 - 15315644
Alignment:
Q  116 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 185  Q
    ||||||| |||||||||||||||||| |||| ||| |||||||||  |||||||||||||||||||||||    
T  15315713 tgttaaatcaaaatcagaatttaataactatactattgaagcaaatctcacccttaccttaattcagaag 15315644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 196
Target Start/End: Original strand, 23634484 - 23634569
Alignment:
Q  111 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||||||||||||||||||||||||| || |||||| ||||  |||||||| ||||||||||||||||| ||| | | ||||||||    
T  23634484 aaacctgttaaaccaaaatcagaattaaaaatctatactaccaaagcaaacctcacccttaccttaatttagatgaacaaatgcac 23634569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 16882864 - 16882789
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcaccaaaaaccaagaattcaa 78  Q
    |||||||||||| |||||||||||| ||||| |||||||||  |||||||||||||||| || ||| |||||||||    
T  16882864 tgtatgcactcataacctatttctaacatcagaacaacaattcctacactcaattcacccaatacctagaattcaa 16882789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 36918047 - 36918117
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 184  Q
    ||||||||| ||||||||||| ||||| ||||| ||||||||| |||| ||||||||||||||||||||||    
T  36918047 ctgttaaactcaaaatcagaaattaatgtctatactactgaagtaaacctcacccttaccttaattcagaa 36918117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 184
Target Start/End: Complemental strand, 20076137 - 20076062
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 184  Q
    |||||||||||||| ||||||||||| | || |||||| ||||||||| |||| |||||||||||||| |||||||    
T  20076137 aaaacctgttaaactcaaaatcagaaatcaacatctatactactgaagtaaacctcacccttaccttagttcagaa 20076062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 24080514 - 24080580
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||| ||||||||||||| || |||||| |||||||||||||| ||||||||||||||    
T  24080514 aaaacctgttaaactcaaaatcagaatt-aacatctatactactgaagcaaacctcacccttacctta 24080580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 24237619 - 24237556
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    ||||||||| ||||||||||| |||| |||||| |||||||||||||| |||||||||||||||    
T  24237619 ctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttaccttaa 24237556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 48428776 - 48428863
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||||||||||||| |||| ||||| |||||  ||||| ||| ||||| |||| |||||||||||||||||||||| || ||||||||    
T  48428776 aaaacctgttaaactcaaattcagactttaaattctatactattgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 48428863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 182
Target Start/End: Original strand, 21963911 - 21964003
Alignment:
Q  89 aatttcccaattttcatctagaaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcag 182  Q
    |||||||||||||||| | |||| || |||||||| ||||||||||| || | |||||| ||||||||| |||| ||||||||||||||||||||    
T  21963911 aatttcccaattttcacc-agaacac-tgttaaactcaaaatcagaaattgaaatctatactactgaagtaaacctcacccttaccttaattcag 21964003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 21409988 - 21409931
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac 60  Q
    ||||||||  ||||||||| ||||| ||||||||||||||| ||||||||||||||||    
T  21409988 tgtatgcaaccagaacctaattctaacatcaaaacaacaatctctacactcaattcac 21409931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 177
Target Start/End: Original strand, 47485046 - 47485099
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    ||||||||||| |||| |||||| |||||||||||||| |||||||||||||||    
T  47485046 caaaatcagaaattaacatctatactactgaagcaaacctcacccttaccttaa 47485099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 20293601 - 20293669
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||||||| |||||||||||||||| |||||  ||| ||||| |||| |||||||||||||||    
T  20293601 aaaacctgttaaactcaaaatcagaatttaaaatctacactattgaagtaaacctcacccttaccttaa 20293669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 20300232 - 20300300
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||||||| |||||||||||||||| |||||  ||| ||||| |||| |||||||||||||||    
T  20300232 aaaacctgttaaactcaaaatcagaatttaaaatctacactattgaagtaaacctcacccttaccttaa 20300300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 24108325 - 24108277
Alignment:
Q  1 gatgtatgcactcagaacctatttctaccatcaaaacaacaatatctac 49  Q
    ||||||| ||||||||||||||||||| ||||||||||||||| |||||    
T  24108325 gatgtatacactcagaacctatttctaacatcaaaacaacaatctctac 24108277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 19045494 - 19045407
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||||||||||||| |||||| | ||| ||| |||||  ||| ||||| |||| |||||||||||||||||||||| || ||||||||    
T  19045494 aaaacctgttaaactcaaaataaaaatctaaaatctacactattgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 19045407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 29553664 - 29553597
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||| |||||||||||   |||| |||| |||||||||||||| ||||||||||||||    
T  29553664 aaaacctgttaaactcaaaatcagaacacaataactatactactgaagcaaacctcacccttacctta 29553597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 196
Target Start/End: Complemental strand, 20396104 - 20396022
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||||||||| |||||||| ||||||||| |||   || ||||| |||| |||||||||||||||||||||| || ||||||||    
T  20396104 ctgttaaacacaaaatcaaaatttaatagctacaatattgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 20396022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 20849891 - 20849957
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaacc 68  Q
    ||||||||  ||||||||| ||||| ||||| ||||||||| |||||||||||||||| ||||||||    
T  20849891 tgtatgcaagcagaacctaattctaacatcagaacaacaatctctacactcaattcactcaaaaacc 20849957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 23194576 - 23194506
Alignment:
Q  117 gttaaaccaaaatcagaatt-taata-tctattctactgaagcaaacttcacccttaccttaattcagaag 185  Q
    |||||||||||||||||||| ||||| ||||  ||| |||||||||| |||||||||||| ||||||||||    
T  23194576 gttaaaccaaaatcagaattataataatctacactattgaagcaaacctcacccttacctgaattcagaag 23194506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 31534492 - 31534426
Alignment:
Q  110 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||||||||  |||||||| ||||| |||||| ||| ||||| |||| ||||||||||||||    
T  31534492 aaaacctgttaaactcaaatcagactttaaaatctatactattgaagtaaacctcacccttacctta 31534426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 31563209 - 31563143
Alignment:
Q  110 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||||||||  |||||||| ||||| |||||| ||| ||||| |||| ||||||||||||||    
T  31563209 aaaacctgttaaactcaaatcagactttaaaatctatactattgaagtaaacctcacccttacctta 31563143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 184
Target Start/End: Complemental strand, 36211242 - 36211168
Alignment:
Q  110 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 184  Q
    ||||||||||||||  |||||||| ||||| |||||  ||| ||||| |||| |||||||||||||| |||||||    
T  36211242 aaaacctgttaaactcaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttagttcagaa 36211168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 179
Target Start/End: Original strand, 49328959 - 49329025
Alignment:
Q  114 cctgttaaaccaaaat-cagaatttaatatctattctactgaagcaaacttcacccttaccttaatt 179  Q
    ||||||||||| |||| |||||||| |||||||| ||||||||| |||  |||||||||||||||||    
T  49328959 cctgttaaacccaaattcagaatttcatatctatactactgaagtaaaactcacccttaccttaatt 49329025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 19860021 - 19860061
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaat 43  Q
    ||||||||||||||||||||||||| ||||| |||||||||    
T  19860021 tgtatgcactcagaacctatttctaacatcagaacaacaat 19860061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 20571666 - 20571734
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||||||| |||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||||    
T  20571666 aaaacctgttaaactcaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttaa 20571734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 21665033 - 21665081
Alignment:
Q  7 tgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 55  Q
    ||||||||||||||||||||| ||||| |||||||||  ||||||||||    
T  21665033 tgcactcagaacctatttctaacatcagaacaacaattcctacactcaa 21665081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 227
Target Start/End: Complemental strand, 21733731 - 21733507
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaaaacctaacccaatttcccaattt 101  Q
    ||||||||  ||||||||||||||| ||| |||||||  ||  ||||||| |||||| ||||||| |||  | |||||| ||||||||| ||||||||||    
T  21733731 tgtatgcaaccagaacctatttctaacattaaaacaatgattcctacactaaattcacccaaaaatcaaagaatcaaaatctaacccaaattcccaattt 21733632  T
Q  102 tcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaa-gcaaacttcacccttaccttaattcagaaggagaaatgc-accgg 199  Q
      | |    |||| ||||||||||||||||||| |||  |||||  ||| |||| |||||| ||| ||||||||||| ||||| | | |||| | || ||    
T  21733631 ctacc--ataaacatgttaaaccaaaatcagaa-ttacaatctacactattgaaggcaaacctcagccttaccttaaatcagatgaacaaattctacagg 21733535  T
Q  200 aattggattctcttggctcttctccctt 227  Q
    | |  | |||||||||||||||||||||    
T  21733534 attctggttctcttggctcttctccctt 21733507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 177
Target Start/End: Complemental strand, 29150429 - 29150361
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||||||| |||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||||    
T  29150429 aaaacctgttaaactcaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttaa 29150361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 18419050 - 18419137
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||||||||||||  ||||||||||||| |||| |||   |  ||||| |||| |||||||||||||||||||||| || ||||||||    
T  18419050 aaaacctgttaaatacaaaatcagaattcaataactacattcttgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 18419137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 39188869 - 39188802
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||| |||||||||| |||||  ||||| ||| ||||| |||| ||||||||||||||    
T  39188869 aaaacctgttaaactcaaaatcagactttaaattctatactattgaagtaaacctcacccttacctta 39188802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 6741442 - 6741508
Alignment:
Q  110 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||||||||  |||||||| ||||| |||||  ||| ||||| |||| ||||||||||||||    
T  6741442 aaaacctgttaaactcaaatcagactttaaaatctacactattgaagtaaacctcacccttacctta 6741508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 37676331 - 37676397
Alignment:
Q  111 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||||||| |||||||||| ||||| ||||| |||| ||||| ||||  |||||||||||||    
T  37676331 aaacctgttaaactcaaaatcagactttaaaatctactctattgaagtaaaccccacccttacctta 37676397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 37683002 - 37683068
Alignment:
Q  111 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||||||| |||||||||| ||||| ||||| |||| ||||| ||||  |||||||||||||    
T  37683002 aaacctgttaaactcaaaatcagactttaaaatctactctattgaagtaaaccccacccttacctta 37683068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 47484935 - 47484981
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctac 49  Q
    ||||||||||||||||||||||||| ||||| ||||| ||| |||||    
T  47484935 tgtatgcactcagaacctatttctaacatcagaacaaaaatctctac 47484981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 5381600 - 5381672
Alignment:
Q  111 aaacctgttaaaccaaaatcagaatttaatatctattctactg-aagcaaacttcacccttaccttaattcaga 183  Q
    |||| ||||||||||||||||||| |||  |||||| ||| || ||| |||| |||||||||||||||||||||    
T  5381600 aaacatgttaaaccaaaatcagaa-ttacaatctatactattgaaagtaaacctcacccttaccttaattcaga 5381672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 9292621 - 9292670
Alignment:
Q  128 atcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    ||||||| |||| |||||| ||||||||| |||| |||||||||||||||    
T  9292621 atcagaaattaaaatctatactactgaagtaaacctcacccttaccttaa 9292670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 19853890 - 19853926
Alignment:
Q  7 tgcactcagaacctatttctaccatcaaaacaacaat 43  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  19853890 tgcactcagaacctatttctaacatcagaacaacaat 19853926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 20837415 - 20837363
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||| |||||||| | ||||||| ||| |||||||||| ||||||||||||||    
T  20837415 caaattcagaattcagtatctatactaatgaagcaaacctcacccttacctta 20837363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 21735990 - 21736030
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaat 43  Q
    ||||||||||||||||||||||||| ||||| ||| |||||    
T  21735990 tgtatgcactcagaacctatttctaacatcagaaccacaat 21736030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 23065989 - 23065937
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 55  Q
    ||||||||||||||||||||||||| ||||| ||  ||||| ||||| |||||    
T  23065989 tgtatgcactcagaacctatttctatcatcagaatcacaatctctactctcaa 23065937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 70; Significance: 1e-31; HSPs: 3)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 111 - 248
Target Start/End: Original strand, 2348 - 2485
Alignment:
Q  111 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattct 210  Q
    |||||||||||||||||||||||||| || |||||  ||||||||| |||| ||||||||||||||||||||| | | || |||||   |||  | |||     
T  2348 aaacctgttaaaccaaaatcagaattaaacatctacactactgaagtaaacatcacccttaccttaattcagatgaacaattgcacaaaaatctggttca 2447  T
Q  211 cttggctcttctcccttttctcccaaaacttgtctgtt 248  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2448 cttggctcttctcccttttctcccaaaacttgtctgtt 2485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 96 - 171
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 184  Q
    |||||||||||||| ||||||||||| | || |||||| ||||||||| |||| ||||||||| |||| |||||||    
T  96 aaaacctgttaaactcaaaatcagaaatcaacatctatactactgaagtaaacctcacccttaacttagttcagaa 171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 2243 - 2317
Alignment:
Q  6 atgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc--aaaaaccaagaattcaa 78  Q
    |||||||||||||||||||||| ||||||| ||   ||  ||||||||||||||||  |||| ||||||||||||    
T  2243 atgcactcagaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaaaacccaagaattcaa 2317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 70; Significance: 1e-31; HSPs: 3)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 111 - 219
Target Start/End: Original strand, 7111 - 7220
Alignment:
Q  111 aaacctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattc 209  Q
    |||||||||||||| |||||||||||  |||| |||| |||||||||||||| ||||||||||||||||||||||||| |||||||| | ||||||||||    
T  7111 aaacctgttaaacccaaaatcagaatccaataactatactactgaagcaaacctcacccttaccttaattcagaaggacaaatgcacagaaattggattc 7210  T
Q  210 tcttggctct 219  Q
    ||||||||||    
T  7211 tcttggctct 7220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 7015 - 7066
Alignment:
Q  5 tatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaat 56  Q
    |||||||||| |||||||||||| |||||||||| |||| ||||||||||||    
T  7015 tatgcactcaaaacctatttctaacatcaaaacagcaatctctacactcaat 7066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 7222 - 7267
Alignment:
Q  211 cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaa 259  Q
    |||||||||||||||||||||||||||||   ||||||| |||||||||    
T  7222 cttggctcttctcccttttctcccaaaac---tctgttttcacgtaaaa 7267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 240
Target Start/End: Original strand, 28104 - 28343
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaacc-aagaattcaaaacctaacccaatttcccaatt 100  Q
    ||||||||  ||||||||||||||| |||||||||| |||| ||||||||||| |||| |||||||| || ||| ||| |   |||||||  |||| | |    
T  28104 tgtatgcaaccagaacctatttctaacatcaaaacagcaatctctacactcaaatcactcaaaaacccaataatccaacata-aacccaaaatccccaat 28202  T
Q  101 ttcatctagaaaacctgttaaaccaaaa-tcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccgg 199  Q
    |||  | | | ||||||||||| ||||| |||||||| |||| |||| |||||||||||||| ||||||||||||||||||||||||| |||||||| |     
T  28203 ttctacca-ataacctgttaaatcaaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagaaggacaaatgcacagc 28301  T
Q  200 aatt-ggattctcttggctcttctcccttttctcccaaaact 240  Q
    ||||  | ||| ||||| ||||||||||||||||||||||||    
T  28302 aattcaggttcacttggttcttctcccttttctcccaaaact 28343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 240
Target Start/End: Original strand, 77584 - 77823
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca--ccaaaaaccaagaattcaaaacctaa-cccaatttcccaat 99  Q
    ||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||  | |||| |||| ||||||   ||||| |||||  |||| |     
T  77584 tgtatgcacccagaacctatttctaacatcaaaacaacaatctctacactcaattcagtcaaaaacccaataattcat--cctaaacccaacatccccaa 77681  T
Q  100 tttcatctagaaaacctgttaaaccaaaatcagaattt-aatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccg 198  Q
    ||||  | | | ||||||||||| ||||||||||| || || ||||||||||||||||||||| ||||||||||||||||||||| | |  |||||||      
T  77682 tttctacca-ataacctgttaaatcaaaatcagaaattcaaaatctattctactgaagcaaacctcacccttaccttaattcagacgaacgaatgcacaa 77780  T
Q  199 gaatt-ggattctcttggctcttctcccttttctcccaaaact 240  Q
     ||||  | ||| |||| |||||||||||||||||||||||||    
T  77781 caattctggttcacttgactcttctcccttttctcccaaaact 77823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 72063 - 72115
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||||||| ||||||||| ||| |||||||||| ||||||||||||||    
T  72063 caaaatcagaattcaatatctatactaatgaagcaaacctcacccttacctta 72115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 3842 - 3953
Alignment:
Q  116 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctcttgg 215  Q
    |||||| |||||||||||||| |||| |||  ||| |||||||||| ||||| ||||||||||||||||||| |||||||| | ||||||||||||||||    
T  3842 tgttaagccaaaatcagaattaaataactacactattgaagcaaacctcaccattaccttaattcagaaggaaaaatgcacagcaattggattctcttgg 3941  T
Q  216 ctcttctccctt 227  Q
    ||||||||||||    
T  3942 ctcttctccctt 3953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 259
Target Start/End: Original strand, 15790 - 16057
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcaccaaaaa--ccaagaattcaaaacctaacccaatttcccaatt 100  Q
    ||||||||||||||||||||||||| ||||||| ||   ||  |||||||||||||||| ||||  |||||||||||| |   |||||||  |||| | |    
T  15790 tgtatgcactcagaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaaaacccaagaattcaacata-aacccaaaatccccaat 15888  T
Q  101 ttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccgga 200  Q
    |||  | | ||| ||||||||||||||||||||||| ||  ||||| |||||||||||||| ||||||||||||||||||||| | | ||||||||   |    
T  15889 ttctaccataaa-cctgttaaaccaaaatcagaattaaacctctatactactgaagcaaacctcacccttaccttaattcagatgaacaaatgcacacaa 15987  T
Q  201 at-tggat--------tct-cttggctcttct-cccttttctcccaaaacttgtctgtttgcacgtaaaa 259  Q
    || ||| |        ||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15988 atctggttcccttagctctacttggctcttctccccttttctcccaaaacttgtctgtttgcacgtaaaa 16057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1290 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1290
Description:

Target: scaffold1290; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 183
Target Start/End: Complemental strand, 581 - 401
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaaccc---aatttcccaa 98  Q
    ||||||||  ||||||||||||||| ||||||||||  |||  |||||||||||||||| |||||||||||||||||  | ||| ||   || |||||||    
T  581 tgtatgcaaccagaacctatttctaacatcaaaacagtaattcctacactcaattcacccaaaaaccaagaattcaa--cttaaaccccaaaattcccaa 484  T
Q  99 ttttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 183  Q
    |||  | |    |||||||||||||||||||||||||| || |||||| |||||||||||||| |||||||||||||||||||||    
T  483 tttctaccat--aaacctgttaaaccaaaatcagaattaaacatctatactactgaagcaaacctcacccttaccttaattcaga 401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 249
Target Start/End: Complemental strand, 663 - 407
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcaccaaaa-accaagaattcaaaacctaacccaatttcccaattt 101  Q
    |||||||||||||||| |||||||| ||||||||||  |||  |||||||||||||||| ||| |||||||||||||     | |||||  |||| | ||    
T  663 tgtatgcactcagaacgtatttctaacatcaaaacagtaattcctacactcaattcacccaaacaccaagaattcaacttaaaccccaaaatccccaatt 564  T
Q  102 tcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaa 201  Q
     |  | | ||| |||||||||||||||||||||||  | |||||| |||||||||||||| ||||||||||||||||||||| | | |||||||| | ||    
T  563 cctaccataaa-cctgttaaaccaaaatcagaattagacatctatactactgaagcaaacctcacccttaccttaattcagacgaacaaatgcacagaaa 465  T
Q  202 ----------ttggattctcttggctcttctcccttttctcccaaaacttgtctgttt 249  Q
              |||| ||  |||||||||||||||||||||||||||||||| ||||||    
T  464 tctggttcacttggctttacttggctcttctcccttttctcccaaaacttgactgttt 407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 125 - 227
Target Start/End: Original strand, 18787060 - 18787162
Alignment:
Q  125 aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctcttggctcttctcc 224  Q
    |||||||||||| || |||||  ||||||||| |||| ||||||||||||||||||||||||| ||||||||   |||||||||||||||||||||||||    
T  18787060 aaaatcagaattaaacatctacactactgaagtaaacctcacccttaccttaattcagaaggaaaaatgcacaacaattggattctcttggctcttctcc 18787159  T
Q  225 ctt 227  Q
    |||    
T  18787160 ctt 18787162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 259
Target Start/End: Original strand, 24721566 - 24721707
Alignment:
Q  116 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaatt-ggattctcttg 214  Q
    ||||||||||||||||||||| |||| |||  ||| |||||||||| ||||||||||||||||||||||||| |||||||  | ||||  | ||| ||||    
T  24721566 tgttaaaccaaaatcagaattcaataactacactattgaagcaaacctcacccttaccttaattcagaaggaaaaatgcatagcaattcaggttcacttg 24721665  T
Q  215 gctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaa 259  Q
    | |||||||||||||||||||||||   ||||||| |||||||||    
T  24721666 gttcttctcccttttctcccaaaac---tctgttttcacgtaaaa 24721707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 111 - 248
Target Start/End: Complemental strand, 22797723 - 22797586
Alignment:
Q  111 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattct 210  Q
    |||| |||||||| |||||||||||| || |||||  ||||||||| |||| ||||||||||||||||||||| | | || |||||   |||  | |||     
T  22797723 aaacttgttaaacgaaaatcagaattaaacatctacactactgaagtaaacctcacccttaccttaattcagatgaacaattgcacaaaaatctggttca 22797624  T
Q  211 cttggctcttctcccttttctcccaaaacttgtctgtt 248  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22797623 cttggctcttctcccttttctcccaaaacttgtctgtt 22797586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 110 - 227
Target Start/End: Complemental strand, 10469962 - 10469844
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 208  Q
    |||||||||||||| ||||||||||| |||||| |||  ||| ||||| |||| |||||||||||||||||||||| || |||||||| | || ||||||    
T  10469962 aaaacctgttaaactcaaaatcagaaattaataactacactattgaagtaaacctcacccttaccttaattcagaatgaaaaatgcacagcaaatggatt 10469863  T
Q  209 ctcttggctcttctccctt 227  Q
    ||||||| |||||||||||    
T  10469862 ctcttggttcttctccctt 10469844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 110 - 227
Target Start/End: Complemental strand, 13127510 - 13127392
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 208  Q
    |||||||||||||| ||||||||||| |||||| |||  ||| ||||| |||| |||||||||||||||||||||| || |||||||| | || ||||||    
T  13127510 aaaacctgttaaactcaaaatcagaaattaataactacactattgaagtaaacctcacccttaccttaattcagaatgaaaaatgcacagcaaatggatt 13127411  T
Q  209 ctcttggctcttctccctt 227  Q
    ||||||| |||||||||||    
T  13127410 ctcttggttcttctccctt 13127392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 18315181 - 18315109
Alignment:
Q  111 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 183  Q
    |||||||||||||||||||||||||| || |||||| |||||||||||||| |||||||||||||||||||||    
T  18315181 aaacctgttaaaccaaaatcagaattaaaaatctatactactgaagcaaacctcacccttaccttaattcaga 18315109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 115 - 215
Target Start/End: Complemental strand, 23020588 - 23020487
Alignment:
Q  115 ctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaatt-ggattctctt 213  Q
    |||||||| ||||||||||| |||  |||||| |||||||||||||| ||||||||||||||||||||||| | |||||||| |||||| |||||| |||    
T  23020588 ctgttaaatcaaaatcagaacttagaatctatactactgaagcaaacctcacccttaccttaattcagaagcacaaatgcacaggaattcggattccctt 23020489  T
Q  214 gg 215  Q
    ||    
T  23020488 gg 23020487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 14615499 - 14615432
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||| ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  14615499 aaaacctgttaaactcaaaatcagaattcaatatctatactactgaagcaaacctcacccttacctta 14615432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 19468689 - 19468870
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactc-aattcaccaaaaaccaagaattcaaaacctaaccc-aatttcccaatt 100  Q
    ||||||||||||||||||||||||| || || ||||||||| ||||||||| ||||  ||||||||| ||||||||| |   | ||| || |||||||||    
T  19468689 tgtatgcactcagaacctatttctaacaccagaacaacaatctctacactcaaattacccaaaaacctagaattcaacataaaccccaaaattcccaatt 19468788  T
Q  101 ttcatctagaaaacctgtt-aaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 184  Q
     | |  |||   ||||||| ||| |||||||||||||||  | |||  ||| |||||||||| ||||||||||||||||||||||    
T  19468789 ctaacatag---acctgttaaaatcaaaatcagaatttatcaactacactattgaagcaaacctcacccttaccttaattcagaa 19468870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 111 - 219
Target Start/End: Complemental strand, 23232631 - 23232522
Alignment:
Q  111 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattc 209  Q
    ||||||||||||  ||||||||| ||| | || |||  ||| |||||||||| |||||||||||||||||||||| || ||||||||   |||| |||||    
T  23232631 aaacctgttaaaatcaaaatcagcattcattaactacactattgaagcaaacctcacccttaccttaattcagaaagacaaatgcacaacaatttgattc 23232532  T
Q  210 tcttggctct 219  Q
    ||||||||||    
T  23232531 tcttggctct 23232522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 27768281 - 27768348
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||| ||||||||||| |||| |||||| ||||||||| |||| ||||||||||||||    
T  27768281 aaaacctgttaaactcaaaatcagaaattaaaatctatactactgaagtaaacctcacccttacctta 27768348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 185
Target Start/End: Complemental strand, 10582608 - 10582547
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 185  Q
    ||||||||||||   | |||||| |||||||||||||| |||||||||||||||||||||||    
T  10582608 caaaatcagaatcagacatctatactactgaagcaaacctcacccttaccttaattcagaag 10582547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 1071601 - 1071705
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa-ggagaaatgcaccggaattggattctcttggctcttct 222  Q
    ||||||||||  ||||| ||||| |||||||||||||| |||||||||||||| || ||||  || |||||||| | ||  | |||||||||| ||||||    
T  1071601 caaaatcagagattaatgtctatactactgaagcaaacctcacccttaccttagtttagaattgaaaaatgcacagcaaaagaattctcttggttcttct 1071700  T
Q  223 ccctt 227  Q
    |||||    
T  1071701 ccctt 1071705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 13941354 - 13941426
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 181  Q
    |||||||||||||| | || ||||||||| |||||||| ||||||||| |||  |||||||||||||||||||    
T  13941354 aaaacctgttaaactccaattcagaatttcatatctatactactgaagtaaaactcacccttaccttaattca 13941426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 14132351 - 14132299
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 55  Q
    ||||| ||||||||||||||||||| ||||||| ||||||| |||||||||||    
T  14132351 tgtatacactcagaacctatttctaacatcaaagcaacaatctctacactcaa 14132299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 24363488 - 24363563
Alignment:
Q  110 aaaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 184  Q
    ||||||||||||| ||||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||| |||||||    
T  24363488 aaaacctgttaaaaccaaaatcagactttaaaatctacactaatgaagtaaacctcacccttaccttagttcagaa 24363563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 24370079 - 24370154
Alignment:
Q  110 aaaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 184  Q
    ||||||||||||| ||||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||| |||||||    
T  24370079 aaaacctgttaaaaccaaaatcagactttaaaatctacactaatgaagtaaacctcacccttaccttagttcagaa 24370154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 29926618 - 29926685
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||| ||||||||||| |||||| |||  ||| |||||||||| ||||||||||||||    
T  29926618 aaaacctgttaaactcaaaatcagaagttaataactacactattgaagcaaacctcacccttacctta 29926685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 25464764 - 25464830
Alignment:
Q  110 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||||||||  |||||||| ||||| |||||| ||| ||||| |||| ||||||||||||||    
T  25464764 aaaacctgttaaactcaaatcagactttaaaatctatactattgaagtaaacctcacccttacctta 25464830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 19587799 - 19587731
Alignment:
Q  110 aaaacctgttaaacc--aaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||||||||   ||||||||||||||  |||||| ||| |||||||||| ||||||||||||||    
T  19587799 aaaacctgttaaactcaaaaatcagaatttagaatctatactaatgaagcaaacctcacccttacctta 19587731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 137
Target Start/End: Original strand, 23106131 - 23106191
Alignment:
Q  76 caaaacctaacccaatttcccaattttcatctagaaaacctgttaaaccaaaatcagaattt 137  Q
    ||||||||||||||| ||||||||||||||  |||| | | |||||||||||||||||||||    
T  23106131 caaaacctaacccaaattcccaattttcatacagaacaac-gttaaaccaaaatcagaattt 23106191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 22797831 - 22797755
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaa 78  Q
    ||||||||  ||||||||||||||| |||||||| |  |||  ||||| |||||||| |||||||||||||||||||    
T  22797831 tgtatgcaaccagaacctatttctaacatcaaaatagtaattcctacattcaattcacccaaaaaccaagaattcaa 22797755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 23234239 - 23234199
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaat 43  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  23234239 tgtatgcactcagaacccatttctaacatcaaaacaacaat 23234199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 5289145 - 5289070
Alignment:
Q  111 aaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 185  Q
    |||||||||||| |||||||| ||||| ||||  |||  ||||||| ||||  |||||||||||||||||||||||    
T  5289145 aaacctgttaaatccaaaatccgaattcaataagtatattactgaaacaaatctcacccttaccttaattcagaag 5289070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 14374570 - 14374519
Alignment:
Q  125 aaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||||||||  |||||| ||| |||||||||| ||||||||||||||    
T  14374570 aaaatcagaatttagaatctatactaatgaagcaaacctcacccttacctta 14374519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 15331345 - 15331258
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||||||||||||| |||||||||| |||||  ||||  | | ||||| ||||  ||||||||||||||||||||| || ||||||||    
T  15331345 aaaacctgttaaactcaaaatcagactttaaattctacaccattgaagtaaaccccacccttaccttaattcagaatgaaaaatgcac 15331258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 17310588 - 17310675
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||||||||||||| |||||||||| |||||  ||||  | | ||||| ||||  ||||||||||||||||||||| || ||||||||    
T  17310588 aaaacctgttaaactcaaaatcagactttaaattctacaccattgaagtaaaccccacccttaccttaattcagaatgaaaaatgcac 17310675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 17414861 - 17414896
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaaca 38  Q
    ||||||||||||||||||||||||| ||||||||||    
T  17414861 tgtatgcactcagaacctatttctaacatcaaaaca 17414896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 17206964 - 17206903
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||| ||||||||||| ||||| ||||| |||||| ||||||| ||||||||||||||    
T  17206964 ctgttaaactcaaaatcagaaattaatgtctatactactg-agcaaacctcacccttacctta 17206903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 19819742 - 19819792
Alignment:
Q  5 tatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 55  Q
    ||||||||||||||||||||||| |||||  ||||||||  ||||||||||    
T  19819742 tatgcactcagaacctatttctaacatcaggacaacaattcctacactcaa 19819792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 26417879 - 26417809
Alignment:
Q  110 aaaacctgttaaaccaaaatcagaatttaatatctattc-tactgaagcaaacttcacccttaccttaatt 179  Q
    ||||||||||||||  ||||||||||| |||| |||| | |||||||| |||  |||||||||||||||||    
T  26417879 aaaacctgttaaactcaaatcagaattcaatacctatacttactgaagtaaaactcacccttaccttaatt 26417809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 33875876 - 33875942
Alignment:
Q  110 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||||||||  |||||||| ||||| |||||  ||| ||||| |||| ||||||||||||||    
T  33875876 aaaacctgttaaactcaaatcagactttaaaatctacactattgaagtaaacctcacccttacctta 33875942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 34133185 - 34133120
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaatt 179  Q
    ||||||||| ||||||||||| | |||| ||||  |||||||| |||| |||||||||||||||||    
T  34133185 ctgttaaacacaaaatcagaaatcaataactatattactgaagaaaacctcacccttaccttaatt 34133120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 13127594 - 13127558
Alignment:
Q  13 cagaacctatttctaccatcaaaacaacaatatctac 49  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  13127594 cagaacctaattctaacatcaaaacaacaatatctac 13127558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 19587896 - 19587844
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 55  Q
    ||||||||  ||||||||||||||| ||||||||||||| | ||| |||||||    
T  19587896 tgtatgcaaccagaacctatttctaacatcaaaacaacagtctctgcactcaa 19587844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 24563440 - 24563492
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||| ||||||||||||| ||||  ||||||||||||  ||||||||||||||    
T  24563440 caaattcagaatttaataactatattactgaagcaaatctcacccttacctta 24563492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 6 - 223
Target Start/End: Complemental strand, 4315 - 4098
Alignment:
Q  6 atgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaat-ttcccaattttc 103  Q
    |||||||||||||||||||||| |||||||||| |||| ||||||||||| ||||| ||||||| ||||||||| |   | |||||  |||||||||  |    
T  4315 atgcactcagaacctatttctaacatcaaaacagcaatctctacactcaaatcacccaaaaacctagaattcaacataaaccccaaaattcccaattc-c 4217  T
Q  104 atctagaaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaat 202  Q
    |||    ||||||||||||  |||||||||||||| | | ||||  ||||||||||||| ||||| |||||||||||||||| || ||||||||    ||    
T  4216 atcat--aaacctgttaaaatcaaaatcagaatttcacaactatattactgaagcaaacctcaccattaccttaattcagaaagacaaatgcacaacgat 4119  T
Q  203 tggattctcttggctcttctc 223  Q
     ||||||||||||||||||||    
T  4118 cggattctcttggctcttctc 4098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 4702 - 4510
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaa-cccaatttcccaatt 100  Q
    ||||||||||||||||||||||||| ||||||| ||   || ||||||||||||||||| |||||||||||||||||  | ||| |||||  |||| | |    
T  4702 tgtatgcactcagaacctatttctaacatcaaaccagtgatttctacactcaattcacccaaaaaccaagaattcaa--cttaaacccaaaatccccaat 4605  T
Q  101 ttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||  | | ||| | ||||||| ||||||||||||| || ||| || |||||||||||||| ||||||||||||||||||||| | | ||||||||    
T  4604 ttctaccataaa-catgttaaatcaaaatcagaattaaaaatcgatactactgaagcaaacctcacccttaccttaattcagatgaacaaatgcac 4510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 19884 - 19692
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaa-cccaatttcccaatt 100  Q
    ||||||||||||||||||||||||| ||||||| ||   || ||||||||||||||||| |||||||||||||||||  | ||| |||||  |||| | |    
T  19884 tgtatgcactcagaacctatttctaacatcaaaccagtgatttctacactcaattcacccaaaaaccaagaattcaa--cttaaacccaaaatccccaat 19787  T
Q  101 ttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||  | | ||| | ||||||| ||||||||||||| || ||| || |||||||||||||| ||||||||||||||||||||| | | ||||||||    
T  19786 ttctaccataaa-catgttaaatcaaaatcagaattaaaaatcgatactactgaagcaaacctcacccttaccttaattcagatgaacaaatgcac 19692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 2266 - 2370
Alignment:
Q  123 ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctcttggctcttct 222  Q
    |||||||||||||| ||||||||  ||||||||| |||| ||||||||||||||||||||||||| ||||||||    || |||||||||||||||||||    
T  2266 ccaaaatcagaattaaatatctacactactgaagtaaacatcacccttaccttaattcagaaggacaaatgcacaacgatcggattctcttggctcttct 2365  T
Q  223 ccctt 227  Q
    |||||    
T  2366 ccctt 2370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 183
Target Start/End: Original strand, 731 - 837
Alignment:
Q  76 caaaacctaacccaatttcccaattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctt 175  Q
    ||||||||||||||| ||||||||||||||  |||| |  |||||||||||||||||||||||| |||||| ||||||||| | || |||||||||||||    
T  731 caaaacctaacccaaattcccaattttcatacagaacaa-tgttaaaccaaaatcagaatttaaaatctatactactgaagtatacctcacccttacctt 829  T
Q  176 aattcaga 183  Q
    ||||||||    
T  830 aattcaga 837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 14467 - 14646
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaatttcccaattt 101  Q
    ||||||||  ||||||||||||||| ||||||||||    | ||||| |||||| |||| ||||| |||  |  ||||||||||||||| |||| |||||    
T  14467 tgtatgcaaccagaacctatttctaacatcaaaacatggtt-tctaccctcaatccacccaaaaatcaaagaaccaaaacctaacccaaattccaaattt 14565  T
Q  102 tcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 183  Q
    ||||  |||| |  |||||||||||||||||||||||| ||||||  |||||||| |||| |||||||||||||||||||||    
T  14566 tcatacagaacaa-tgttaaaccaaaatcagaatttaaaatctatattactgaagtaaacctcacccttaccttaattcaga 14646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 115 - 227
Target Start/End: Original strand, 17002 - 17115
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctctt 213  Q
    ||||||||| |||||| |||| |||| ||||| ||||||||||||||| |||||||||||||||||||||| || ||||||||   ||||||||||||||    
T  17002 ctgttaaactcaaaattagaaattaacatctactctactgaagcaaacctcacccttaccttaattcagaatgaaaaatgcacatcaattggattctctt 17101  T
Q  214 ggctcttctccctt 227  Q
    || ||| |||||||    
T  17102 ggttctcctccctt 17115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 16901 - 16941
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaat 43  Q
    ||||| ||||||||||||||||||| |||||||||||||||    
T  16901 tgtatacactcagaacctatttctaacatcaaaacaacaat 16941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 111 - 259
Target Start/End: Complemental strand, 21978 - 21820
Alignment:
Q  111 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaat-tggat-- 207  Q
    |||||||||||| ||||||||||||| || |||||  ||||||||| |||| ||||||||||||||||||||| | | |||||||| | ||| ||| |      
T  21978 aaacctgttaaatcaaaatcagaattaaacatctacactactgaagtaaacctcacccttaccttaattcagatgaacaaatgcacagaaatctggttca 21879  T
Q  208 ------tct-cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaa 259  Q
          ||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21878 cttggctctacttggctcttctcccttttctcccaaaacttgtctgttttcacgtaaaa 21820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 111 - 259
Target Start/End: Complemental strand, 26175 - 26017
Alignment:
Q  111 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaat-tggat-- 207  Q
    |||||||||||| ||||||||||||| || |||||  ||||||||| |||| ||||||||||||||||||||| | | |||||||| | ||| ||| |      
T  26175 aaacctgttaaatcaaaatcagaattaaacatctacactactgaagtaaacctcacccttaccttaattcagatgaacaaatgcacagaaatctggttca 26076  T
Q  208 ------tct-cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaa 259  Q
          ||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26075 cttggctctacttggctcttctcccttttctcccaaaacttgtctgttttcacgtaaaa 26017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 111 - 259
Target Start/End: Original strand, 46476 - 46629
Alignment:
Q  111 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaat-tgg---a 206  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||||| |||| ||||||||||||||||||||| | | || | |||   ||| |||   |    
T  46476 aaacctattaaaccaaaatcagaatt-aatatctatactactgaagtaaacctcacccttaccttaattcagatgaacaatttcacaaaaatctggttca 46574  T
Q  207 ttct-cttggctcttctccc-ttttctcccaaaacttgtctgtttgcacgtaaaa 259  Q
     ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  46575 ctctacttggctcttctccctttttctcccaaaacttgtctgtttgcacgtaaaa 46629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 57; Significance: 7e-24; HSPs: 6)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 243
Target Start/End: Complemental strand, 56088 - 55847
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaaaacctaacccaatttcccaattt 101  Q
    ||||||||  ||||||||||||||| |||| ||||| |||| ||||||||||||||| ||||||||| |  || | |     ||||||| ||||||||||    
T  56088 tgtatgcaaccagaacctatttctaacatcgaaacagcaatctctacactcaattcacccaaaaacccattatcccatcataaacccaaattcccaattt 55989  T
Q  102 tcatctagaaaacctgtt-aaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccgga 200  Q
      | |   | ||| |||| ||| ||||||||||||| |||| |||| |||||||||||||| |||||||||||||||||||||  || |||||||| | |    
T  55988 ctaac--aataacttgttaaaatcaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagatagacaaatgcacagca 55891  T
Q  201 att-ggattctcttggctcttctcccttttctcccaaaacttgt 243  Q
     ||  | ||| ||||| |||||||||||||||||||||||||||    
T  55890 gttcaggttcacttggttcttctcccttttctcccaaaacttgt 55847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 187148 - 187072
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaa 78  Q
    ||||||||||||||||||||||||| ||||| |||||||||  |||||||||||||| ||||||||| |||||||||    
T  187148 tgtatgcactcagaacctatttctaacatcagaacaacaattcctacactcaattcacccaaaaacctagaattcaa 187072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 196775 - 196699
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaa 78  Q
    ||||||||||||||||||||||||| ||||| |||||||||  |||||||||||||| ||||||||| |||||||||    
T  196775 tgtatgcactcagaacctatttctaacatcagaacaacaattcctacactcaattcacccaaaaacctagaattcaa 196699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 147809 - 147885
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaa 78  Q
    ||||||||||||||||||||||||| |||| ||||| |||| ||||||||||| ||| ||||||||| |||||||||    
T  147809 tgtatgcactcagaacctatttctaacatcgaaacagcaatctctacactcaaatcacccaaaaacctagaattcaa 147885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 223
Target Start/End: Original strand, 154996 - 155217
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaa---cccaatttcccaa 98  Q
    ||||| ||||||||||||||||||| |||| ||| | |||| ||||||||||| ||||| ||||||| ||||||||| |  |||   || || |||||||    
T  154996 tgtatccactcagaacctatttctaacatcgaaatagcaatctctacactcaaatcacccaaaaacctagaattcaaca--taaactccaaaattcccaa 155093  T
Q  99 ttttcatctagaaaacctgttaaa--ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    || |  | ||   |||||||||||  |  ||||||||||| |  |||||  ||||||||| |||| ||||||||||||||| |||||| || ||||||||    
T  155094 ttctattata---aacctgttaaaatcagaaatcagaattaagcatctacactactgaagtaaacctcacccttaccttaaatcagaaagacaaatgcac 155190  T
Q  197 cggaattggattctcttggctcttctc 223  Q
        || |||||||||||| |||||||    
T  155191 aacgatcggattctcttggttcttctc 155217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 223
Target Start/End: Original strand, 147933 - 148030
Alignment:
Q  126 aaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctcttggctcttctc 223  Q
    ||||||||||| |  |||||  ||||||||| |||| ||||||||||||||| ||||||  | ||||||||    || |||||||||||| |||||||    
T  147933 aaatcagaattaagcatctacactactgaagtaaacctcacccttaccttaaatcagaaaaacaaatgcacaacgatcggattctcttggttcttctc 148030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0923 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0923
Description:

Target: scaffold0923; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 785 - 872
Alignment:
Q  110 aaaacctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||||| ||||||||| |||||||||||| |||| |||| |||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  785 aaaacttgttaaacccaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagaaggaaaaatgcac 872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 19465 - 19576
Alignment:
Q  116 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctcttgg 215  Q
    |||||||||||||||||||||||||| |||  ||| |||||||||| | ||||||||||||| ||||| | | ||||||||   |||  |||||||||||    
T  19465 tgttaaaccaaaatcagaatttaataactacactattgaagcaaacctgacccttaccttaaatcagatgaacaaatgcacaacaatcagattctcttgg 19564  T
Q  216 ctcttctccctt 227  Q
    ||||||||||||    
T  19565 ctcttctccctt 19576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 52; Significance: 7e-21; HSPs: 5)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 110 - 219
Target Start/End: Complemental strand, 37884 - 37773
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaagg-agaaatgcaccggaattggat 207  Q
    |||||||||||||  ||| ||||||||| | ||||||  ||| ||||| ||||||||||||||||||||||||||||| | ||||||||||  |||||||    
T  37884 aaaacctgttaaaatcaacatcagaattaagtatctacactattgaagtaaacttcacccttaccttaattcagaaggaaaaaatgcaccgtgattggat 37785  T
Q  208 tctcttggctct 219  Q
    ||||||||||||    
T  37784 tctcttggctct 37773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 110 - 219
Target Start/End: Complemental strand, 135945 - 135834
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaagg-agaaatgcaccggaattggat 207  Q
    |||||||||||||  ||| ||||||||| | ||||||  ||| ||||| ||||||||||||||||||||||||||||| | ||||||||||  |||||||    
T  135945 aaaacctgttaaaatcaacatcagaattaagtatctacactattgaagtaaacttcacccttaccttaattcagaaggaaaaaatgcaccgtgattggat 135846  T
Q  208 tctcttggctct 219  Q
    ||||||||||||    
T  135845 tctcttggctct 135834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 181
Target Start/End: Original strand, 105192 - 105283
Alignment:
Q  89 aatttcccaattttcatctagaaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 181  Q
    |||||||||||||||| | |||| || |||||||| |||||||| || |||| |||||| ||||||||| |||| |||||||||||||||||||    
T  105192 aatttcccaattttcacc-agaacac-tgttaaactcaaaatcaaaaattaaaatctatactactgaagtaaacctcacccttaccttaattca 105283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 37981 - 37929
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 55  Q
    ||||||||||||||||||||||||| ||||| |||||||||  ||||||||||    
T  37981 tgtatgcactcagaacctatttctaacatcagaacaacaattcctacactcaa 37929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 136041 - 135989
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 55  Q
    ||||||||||||||||||||||||| ||||| |||||||||  ||||||||||    
T  136041 tgtatgcactcagaacctatttctaacatcagaacaacaattcctacactcaa 135989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 13673 - 13866
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc--aaaaaccaagaattcaaaacctaa-cccaatttcccaat 99  Q
    ||||||||||||||||||||||||| ||||||| ||   ||  ||||||||||||||||  ||||| | |||||||||  | ||| |||||  |||| |     
T  13673 tgtatgcactcagaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaaaaaaccagaattcaa--cttaaacccaaaatccctaa 13770  T
Q  100 tttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||||  | | ||| ||||||||| ||||||||||||| || |||||  |||||||||||||| ||||||||||||||||||||| | | ||||||||    
T  13771 tttctaccataaa-cctgttaaatcaaaatcagaattaaacatctacactactgaagcaaacctcacccttaccttaattcagacgaacaaatgcac 13866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 196
Target Start/End: Original strand, 1372 - 1451
Alignment:
Q  116 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||||||||||||||||||||| |||| |||  ||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  1372 tgttaaaccaaaatcagaattcaataactacactattgaagcaaacctcacccttaccttaattcagaagga-aaatgcac 1451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 59658 - 59586
Alignment:
Q  111 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 183  Q
    |||||||||||||||||||||||||| || |||||  ||||||||| |||| |||||||||||||||||||||    
T  59658 aaacctgttaaaccaaaatcagaattaaaaatctacactactgaagtaaacctcacccttaccttaattcaga 59586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 61221 - 61150
Alignment:
Q  111 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 183  Q
    |||| |||||||||||||||| |||| || |||||  ||||||||| |||| ||| |||||||||||||||||    
T  61221 aaacttgttaaaccaaaatcataattaaaaatctacactactgaagtaaacctca-ccttaccttaattcaga 61150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 371241 - 371317
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaa 78  Q
    ||||||||||||||||||||||||| ||||| |||||||||  |||||||||||||| ||||||||| |||||||||    
T  371241 tgtatgcactcagaacctatttctaacatcagaacaacaattcctacactcaattcatccaaaaacctagaattcaa 371317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 10334 - 10409
Alignment:
Q  111 aaacctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 185  Q
    |||||||||||||| ||||||| |||| |||| |||| |||||||||||||| |||||||||||||||||||||||    
T  10334 aaacctgttaaacccaaaatcataattcaataactatactactgaagcaaacctcacccttaccttaattcagaag 10409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 10197 - 10256
Alignment:
Q  1 gatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac 60  Q
    ||||||||||  ||||||||||||||  |||||||||| |||| ||||||||||||||||    
T  10197 gatgtatgcaaccagaacctatttctcacatcaaaacagcaatctctacactcaattcac 10256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 26990 - 27055
Alignment:
Q  116 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 181  Q
    ||||||||||||||||||||| |||| ||||  ||||||||||||||||| |||||||||||||||    
T  26990 tgttaaaccaaaatcagaattcaataactatattactgaagcaaacttcatccttaccttaattca 27055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 28372 - 28437
Alignment:
Q  116 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 181  Q
    ||||||||||||||||||||| |||| ||||  ||||||||||||||||| |||||||||||||||    
T  28372 tgttaaaccaaaatcagaattcaataactatattactgaagcaaacttcatccttaccttaattca 28437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 196
Target Start/End: Complemental strand, 206936 - 206852
Alignment:
Q  111 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||| ||||||| ||||||||||||| || |||||| |||||||||||||| ||||||||||||||| ||||||| | ||||||||    
T  206936 aaacatgttaaatcaaaatcagaattcaacatctatactactgaagcaaacctcacccttaccttaa-tcagaagaacaaatgcac 206852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 207046 - 206968
Alignment:
Q  1 gatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaa 78  Q
    ||||||||||  || |||||||||| | ||| ||||||  |||  |||||||||||||| |||||||||||||||||||    
T  207046 gatgtatgcaaccaaaacctatttcgaacattaaaacagtaattcctacactcaattcacccaaaaaccaagaattcaa 206968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 10676 - 10744
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||||||| |||||||||||||||| |||||| ||||||||| |||| |||||||||||||||    
T  10676 aaaacctgttaaactcaaaatcagaatttaaaatctatactactgaagtaaacctcacccttaccttaa 10744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 7783 - 7859
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaa 78  Q
    |||||||||||| |||||||||||| ||||| |||||||||  |||||||||||||| ||||||||| |||||||||    
T  7783 tgtatgcactcaaaacctatttctaacatcagaacaacaattcctacactcaattcacccaaaaacctagaattcaa 7859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 45; Significance: 1e-16; HSPs: 4)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 9324 - 9252
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 181  Q
    |||||||||||||| ||||||||||| || |||||||| ||||||||| ||| ||||||||||||||||||||    
T  9324 aaaacctgttaaactcaaaatcagaaattcatatctatactactgaagtaaaattcacccttaccttaattca 9252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 14888 - 14816
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 181  Q
    |||||||||| ||| |||||||||||||| |||||||| |||||||||||||  ||||||||||| |||||||    
T  14888 aaaacctgttcaactcaaaatcagaatttcatatctatactactgaagcaaaactcacccttaccataattca 14816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 9420 - 9374
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctac 49  Q
    ||||||||||||||||||| ||||| ||||| |||||||||||||||    
T  9420 tgtatgcactcagaacctaattctaacatcagaacaacaatatctac 9374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 14985 - 14938
Alignment:
Q  2 atgtatgcactcagaacctatttctaccatcaaaacaacaatatctac 49  Q
    |||||||||||||||||||| || || ||||| |||||||||||||||    
T  14985 atgtatgcactcagaacctaattttaacatcagaacaacaatatctac 14938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 254446 - 254514
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||||||| ||||||||||| |||| |||||| |||||||||||||| |||||||||||||||    
T  254446 aaaacctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttaccttaa 254514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 247934 - 248002
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||||||| ||||||||||| |||| |||||| |||||||||||||| ||||||||| |||||    
T  247934 aaaacctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttatcttaa 248002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 322025 - 322092
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||| ||||||||||||| ||||||||| ||| |||||||||| ||||||||||||||    
T  322025 aaaacctgttaaactcaaaatcagaattcaatatctatactaatgaagcaaacctcacccttacctta 322092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 327713 - 327777
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacc 173  Q
    ||||||| |||||| ||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  327713 aaaacctattaaactcaaaatcagaatttaatatctatactaatgaagcaaacctcacccttacc 327777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0947 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0947
Description:

Target: scaffold0947; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 3524 - 3331
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaaaacctaaccc-aatttcccaatt 100  Q
    ||||||||||||||||||||||||| ||||| |||| |||| ||| ||||||| ||| ||||||||| ||||||||| |   | ||| || |||||||||    
T  3524 tgtatgcactcagaacctatttctaacatcagaacagcaatctctgcactcaaatcacccaaaaacctagaattcaacataaaccccaaaattcccaatt 3425  T
Q  101 ttcatctagaaaacctgtt-aaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
     | |  |   || |||||| ||| ||||||||||||| || | ||||  |||||||| |||| |||||||||||||||||| ||| || ||||||||    
T  3424 ctaacat---aagcctgttaaaatcaaaatcagaattcaacaactatattactgaagaaaacctcacccttaccttaattctgaaagacaaatgcac 3331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 47173 - 46980
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaat-ttcccaatt 100  Q
    |||||||||||| |||||||||||| ||| | ||||||||| | ||||||||| ||||| ||||||| | ||||||| |   | |||||  |||||||||    
T  47173 tgtatgcactcataacctatttctaacattagaacaacaatctttacactcaaatcacccaaaaacctaaaattcaacataaaccccaaaattcccaatt 47074  T
Q  101 ttcatctagaaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
     | |  ||   |||||||||||  ||||||||||||| |  | ||||  ||||||||||||| |||||||||||||||||||||| || ||||||||    
T  47073 ctaacata---aacctgttaaaatcaaaatcagaattcagcaactatattactgaagcaaacctcacccttaccttaattcagaaagacaaatgcac 46980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 25576 - 25638
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||| |||||||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  25576 ctgttaaacacaaaatcagaatttaataactatactactgaagcaaacctcacccttacctta 25638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 36244 - 36306
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||| |||||||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  36244 ctgttaaacacaaaatcagaatttaataactatactactgaagcaaacctcacccttacctta 36306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 42651 - 42713
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||| |||||||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  42651 ctgttaaacacaaaatcagaatttaataactatactactgaagcaaacctcacccttacctta 42713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1853 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold1853
Description:

Target: scaffold1853; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 166 - 1
Alignment:
Q  1 gatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaa-gaattcaaaacctaa-cccaatttccca 97  Q
    ||||||||||||||||| ||||||||| ||||||| ||   ||  |||||||||||||||| ||||||||| ||||||||  | ||| |||||  ||||     
T  166 gatgtatgcactcagaatctatttctaacatcaaaccagtgattactacactcaattcacccaaaaaccaaagaattcaa--cttaaacccaaaatcccc 69  T
Q  98 attttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcac 166  Q
    | ||||  | | ||| ||||||||||||||||||||||| || |||||| |||||||||||||| ||||    
T  68 aatttctaccataaa-cctgttaaaccaaaatcagaattaaaaatctatactactgaagcaaacctcac 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 109 - 185
Target Start/End: Complemental strand, 17656 - 17579
Alignment:
Q  109 gaaaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 185  Q
    |||||||||||||| ||||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||||||||||||    
T  17656 gaaaacctgttaaaaccaaaatcagactttaaaatctacactaatgaagtaaacctcacccttaccttaattcagaag 17579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 32510 - 32615
Alignment:
Q  123 ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcag-aaggagaaatgcaccggaattggattctcttggctcttc 221  Q
    |||||||||||| |||||| |||  ||| ||||| |||| |||||||||||||||||||| || || |||||||| | ||  |||||||||||| |||||    
T  32510 ccaaaatcagaaattaataactacactattgaagtaaacctcacccttaccttaattcagaaatgaaaaatgcacagcaaaaggattctcttggttcttc 32609  T
Q  222 tccctt 227  Q
    ||||||    
T  32610 tccctt 32615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 9409 - 9485
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 185  Q
    ||||| |||||||| ||||||||||||   | |||||| |||||||||||||| |||||||||||||||||||||||    
T  9409 aaaacttgttaaactcaaaatcagaatcagacatctatactactgaagcaaacctcacccttaccttaattcagaag 9485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 1494 - 1570
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 185  Q
    ||||| |||||||| || |||||||||  || |||||| |||||||||||||| |||||||||||||||||||||||    
T  1494 aaaacttgttaaactcagaatcagaatcaaacatctatactactgaagcaaacctcacccttaccttaattcagaag 1570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 5118 - 5047
Alignment:
Q  111 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 181  Q
    ||||||||||||  ||||||||||||  ||||||||| ||||||||| ||| ||||||||||||||||||||    
T  5118 aaacctgttaaaatcaaaatcagaatccaatatctatactactgaagtaaaattcacccttaccttaattca 5047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 6954 - 6867
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    |||||||||||||| |||||| ||| ||||| |||||  ||| ||||| |||| |||||||||||||||||||||| || ||||||||    
T  6954 aaaacctgttaaactcaaaattagactttaaaatctacactattgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 6867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 16653 - 16566
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||||| |||||||| ||||||||||||   | |||||| |||||||||||||| |||| |||||||||||||||||| | ||||||||    
T  16653 aaaacttgttaaactcaaaatcagaatcagacatctatactactgaagcaaacctcacacttaccttaattcagaagaaaaaatgcac 16566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 982 - 1049
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||| ||||||||||| |||| |||||  |||||||||||||| ||||||||||||||    
T  982 aaaacctgttaaactcaaaatcagaaattaacatctacactactgaagcaaacctcacccttacctta 1049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 893 - 933
Alignment:
Q  9 cactcagaacctatttctaccatcaaaacaacaatatctac 49  Q
    ||||||||||||||||||| ||||| ||||||||| |||||    
T  893 cactcagaacctatttctaacatcagaacaacaatctctac 933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 46048 - 45915
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaatttcccaattt 101  Q
    ||||||||  ||||||||||||||| |||||||||||   | ||||| |||||| |||| ||||| |||  |  ||||||||||||||| ||||||||||    
T  46048 tgtatgcaaccagaacctatttctaacatcaaaacaaggtt-tctaccctcaatccacccaaaaatcaaagaaccaaaacctaacccaaattcccaattt 45950  T
Q  102 tcatctagaaaacctgttaaaccaaaatcagaattt 137  Q
    ||||  |||| |  ||||||||||||||||||||||    
T  45949 tcatacagaaca-atgttaaaccaaaatcagaattt 45915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 171028 - 170961
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||| |||||| |||||| |||| |||| |||||||||||||| ||||||||||||||    
T  171028 aaaacctgttaaactcaaaattagaattcaataactatactactgaagcaaacctcacccttacctta 170961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0560 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 241 - 136
Alignment:
Q  123 ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcag-aaggagaaatgcaccggaattggattctcttggctcttc 221  Q
    |||||||||||| |||||| |||  ||| | ||| |||| |||||||||||||||||||| || || |||||||| | ||  |||||||||||| |||||    
T  241 ccaaaatcagaaattaataactacactattaaagtaaacctcacccttaccttaattcagaaatgaaaaatgcacagcaaaaggattctcttggttcttc 142  T
Q  222 tccctt 227  Q
    ||||||    
T  141 tccctt 136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 16073 - 16020
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    ||||||||||||| ||||||||  |||||||||||||| |||||||||||||||    
T  16073 caaaatcagaattcaatatctacactactgaagcaaacctcacccttaccttaa 16020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 3297 - 3346
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttacc 173  Q
    ||||||||||||| ||||||||| |||||||||||||| |||||||||||    
T  3297 caaaatcagaattcaatatctatactactgaagcaaacctcacccttacc 3346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 45309 - 45370
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 185  Q
    ||||||||||||   |||||||| ||||| |||||||| |||||||||||||||||||||||    
T  45309 caaaatcagaatcagatatctatactactaaagcaaacatcacccttaccttaattcagaag 45370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 4188 - 4248
Alignment:
Q  125 aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 185  Q
    |||||||||||| |||| |||  ||| |||||||||| |||||||||||||||||||||||    
T  4188 aaaatcagaattcaataactacactattgaagcaaacctcacccttaccttaattcagaag 4248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 12728 - 12688
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaat 43  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  12728 tgtatgcactcagaacccatttctaacatcaaaacaacaat 12688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 26743 - 26795
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 55  Q
    ||||||||||||||||||||||||| ||||| |||||||||  ||||||||||    
T  26743 tgtatgcactcagaacctatttctaacatcagaacaacaattcctacactcaa 26795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 45176 - 45228
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||||||| ||||||||  |||||||||||||| ||||||||||||||    
T  45176 caaaatcagaattcaatatctacactactgaagcaaacctcacccttacctta 45228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 249
Target Start/End: Original strand, 45283 - 45312
Alignment:
Q  220 tctcccttttctcccaaaacttgtctgttt 249  Q
    ||||||||||||||||||||||||||||||    
T  45283 tctcccttttctcccaaaacttgtctgttt 45312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 122003 - 122050
Alignment:
Q  211 cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaa 259  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  122003 cttggctcttctcccttttctcccaaagcttgtctgttt-cacgtaaaa 122050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 132879 - 132926
Alignment:
Q  211 cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaa 259  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  132879 cttggctcttctcccttttctcccaaagcttgtctgttt-cacgtaaaa 132926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 8208 - 8275
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||| ||||||||||||| |  |||||| ||| |||||||||| ||||||||||||||    
T  8208 aaaacctgttaaactcaaaatcagaattcagaatctatactaatgaagcaaacctcacccttacctta 8275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 8112 - 8164
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 55  Q
    ||||||||||||||||| |||| || ||||||||||||||| ||||| |||||    
T  8112 tgtatgcactcagaacccatttataacatcaaaacaacaatctctactctcaa 8164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 138006 - 138069
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    ||||||||| ||||||||||| |||| |||||  |||||||||||||| |||||||||||||||    
T  138006 ctgttaaactcaaaatcagaaattaacatctacactactgaagcaaacctcacccttaccttaa 138069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 160724 - 160663
Alignment:
Q  115 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||| ||||||||||||| |||| |||| ||| |||||||||||||||||||||||||    
T  160724 ctgttaaacacaaaatcagaatt-aataactatactattgaagcaaacttcacccttacctta 160663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 23967 - 24039
Alignment:
Q  111 aaacctgttaaaccaaaatcagaatttaatatctattctactg-aagcaaacttcacccttaccttaattcaga 183  Q
    |||| |||||||||||||||||||||| | |||||| ||| || ||| |||| |||||||||||||||||||||    
T  23967 aaacatgttaaaccaaaatcagaatttta-atctatactattgaaagtaaacctcacccttaccttaattcaga 24039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 14441 - 14388
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||| |||||| |||| |||||| ||||||||| ||||||||||||||||||||    
T  14441 caaattcagaaattaaaatctatactactgaagtaaacttcacccttaccttaa 14388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1584 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold1584
Description:

Target: scaffold1584; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 1185 - 1225
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaat 43  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  1185 tgtatgcactcagaacccatttctaacatcaaaacaacaat 1225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1584; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 1297 - 1353
Alignment:
Q  125 aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 181  Q
    |||||||||||  ||||||||| ||||||||| |||  |||||||||||||||||||    
T  1297 aaaatcagaatccaatatctatactactgaagtaaaactcacccttaccttaattca 1353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 14332 - 14400
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    |||||||||||||| |||||||||||||||| |||||  ||| ||||| ||||  ||||||||||||||    
T  14332 aaaacctgttaaactcaaaatcagaatttaacatctacactattgaagtaaaccccacccttaccttaa 14400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 11525 - 11473
Alignment:
Q  124 caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||||||| ||||| ||| ||| |||||||||| ||||||||||||||    
T  11525 caaaatcagaattcaatatttatactattgaagcaaacctcacccttacctta 11473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 26549 - 26624
Alignment:
Q  110 aaaacctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 185  Q
    ||||| ||||||||| |||||||||||| |||| |||  ||| ||||||||||  ||||||||||||||||||||||    
T  26549 aaaacttgttaaacctaaaatcagaattcaataactacactattgaagcaaacc-cacccttaccttaattcagaag 26624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 8087 - 8155
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 177  Q
    ||||| |||||||| ||||||||||| |||| | |||| ||||||||| |||| |||||||||||||||    
T  8087 aaaacatgttaaactcaaaatcagaaattaaaacctatactactgaagtaaacctcacccttaccttaa 8155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 242
Target Start/End: Complemental strand, 978 - 844
Alignment:
Q  110 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaa-gcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattg-gat 207  Q
    ||||| |||||||||||||||||||||  | |||||| ||| |||| | |||| ||||||||||||||||||| | | | |||  |  | |||||  | |    
T  978 aaaacatgttaaaccaaaatcagaattata-atctatactattgaaagtaaacatcacccttaccttaattcaaacgaacaaactctacagaattctggt 880  T
Q  208 tctcttggctcttctccctt-ttctcccaaaacttg 242  Q
    |||||||||||||||||||| |||||||||||||||    
T  879 tctcttggctcttctcccttgttctcccaaaacttg 844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 10097 - 10132
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaaca 38  Q
    ||||||||||||||||||||||||| ||||||||||    
T  10097 tgtatgcactcagaacctatttctaacatcaaaaca 10132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 238
Target Start/End: Complemental strand, 15941 - 15911
Alignment:
Q  208 tctcttggctcttctcccttttctcccaaaa 238  Q
    |||||||||||||||||||||||||||||||    
T  15941 tctcttggctcttctcccttttctcccaaaa 15911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 10107 - 10142
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaaca 38  Q
    ||||||||||||||||||||||||| ||||||||||    
T  10107 tgtatgcactcagaacctatttctaacatcaaaaca 10142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 26842 - 26767
Alignment:
Q  111 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 185  Q
    ||||||||||||  |||||| |||||| | || |||  ||| |||||||||| |||||||||||||||||||||||    
T  26842 aaacctgttaaaatcaaaattagaattcattaactacactattgaagcaaacctcacccttaccttaattcagaag 26767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 21131 - 21198
Alignment:
Q  110 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    |||||||||||||  |||||||| || | |||| |||| |||||||||||||| ||||||||||||||    
T  21131 aaaacctgttaaattcaaaatcaaaactcaataactatactactgaagcaaacctcacccttacctta 21198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 21035 - 21075
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaat 43  Q
    ||||||||||||||||| ||||||| |||||| ||||||||    
T  21035 tgtatgcactcagaacccatttctaacatcaatacaacaat 21075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 4055 - 4101
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctac 49  Q
    ||||||||||||||||||||||||| ||||| || |||||| |||||    
T  4055 tgtatgcactcagaacctatttctaacatcagaataacaatctctac 4101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 8094 - 8140
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctac 49  Q
    ||||||||||||||||||||||||| ||||| || |||||| |||||    
T  8094 tgtatgcactcagaacctatttctaacatcagaataacaatctctac 8140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 17760 - 17694
Alignment:
Q  110 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 176  Q
    ||||||||||||||  |||||||| ||||| |||||  ||| ||||| |||| ||||||||||||||    
T  17760 aaaacctgttaaactcaaatcagactttaaaatctacactattgaagtaaacctcacccttacctta 17694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 55256 - 55190
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaacc 68  Q
    ||||||||  ||||||||||||||| || |||||||  ||| |||||||||||||||| ||||||||    
T  55256 tgtatgcaaccagaacctatttctaacagcaaaacagtaatctctacactcaattcactcaaaaacc 55190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 196
Target Start/End: Original strand, 50928 - 51014
Alignment:
Q  111 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 196  Q
    ||||||||||||| |||||||||| |||||  ||||  ||| ||||| ||||  ||||||||||||| ||||||| || ||||||||    
T  50928 aaacctgttaaactcaaaatcagactttaaattctacactattgaagtaaaccccacccttaccttagttcagaatgaaaaatgcac 51014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 2524 - 2455
Alignment:
Q  111 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaatt 179  Q
    ||||||||||||  ||||||||||||| | || |||  ||| |||||||||| |||||||||||||||||    
T  2524 aaacctgttaaaatcaaaatcagaattcattaactacactattgaagcaaacctcacccttaccttaatt 2455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 11232 - 11163
Alignment:
Q  111 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaatt 179  Q
    ||||||||||||  ||||||||||||| | || |||  ||| |||||||||| |||||||||||||||||    
T  11232 aaacctgttaaaatcaaaatcagaattcattaactacactattgaagcaaacctcacccttaccttaatt 11163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 31651 - 31696
Alignment:
Q  3 tgtatgcactcagaacctatttctaccatcaaaacaacaatatcta 48  Q
    ||||| ||||||||||||||||||| ||||| ||||||||| ||||    
T  31651 tgtatacactcagaacctatttctaacatcagaacaacaatctcta 31696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 36534 - 36606
Alignment:
Q  111 aaacctgttaaaccaaaatcagaatttaatatctattctactga-agcaaacttcacccttaccttaattcaga 183  Q
    |||| ||||||||||||||||||| |||  |||||| ||| ||| || |||| |||||||||||||||||||||    
T  36534 aaacatgttaaaccaaaatcagaa-ttataatctatactaatgagagtaaacctcacccttaccttaattcaga 36606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University