View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15164_high_1 (Length: 681)

Name: NF15164_high_1
Description: NF15164
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15164_high_1
NF15164_high_1
[»] chr5 (29 HSPs)
chr5 (1-667)||(29224616-29225280)
chr5 (94-145)||(24498579-24498630)
chr5 (101-159)||(18981190-18981248)
chr5 (96-146)||(26675960-26676010)
chr5 (96-146)||(26947568-26947618)
chr5 (95-176)||(5107229-5107310)
chr5 (105-154)||(7713538-7713587)
chr5 (94-159)||(18872662-18872727)
chr5 (93-157)||(35131109-35131173)
chr5 (109-149)||(42659587-42659627)
chr5 (125-168)||(18697776-18697818)
chr5 (101-168)||(25603992-25604059)
chr5 (94-176)||(11637556-11637638)
chr5 (96-154)||(13864341-13864399)
chr5 (94-148)||(29695010-29695064)
chr5 (101-143)||(36170057-36170099)
chr5 (94-168)||(40715941-40716015)
chr5 (104-138)||(42178827-42178861)
chr5 (104-145)||(5614770-5614811)
chr5 (96-157)||(8544992-8545053)
chr5 (96-157)||(23118054-23118115)
chr5 (101-168)||(25861939-25862003)
chr5 (94-135)||(25928909-25928950)
chr5 (300-337)||(29146715-29146752)
chr5 (96-145)||(36623189-36623238)
chr5 (96-148)||(26034620-26034672)
chr5 (94-154)||(33369419-33369479)
chr5 (105-157)||(37073771-37073823)
chr5 (104-156)||(38370755-38370807)
[»] chr1 (25 HSPs)
chr1 (94-157)||(42146310-42146373)
chr1 (93-157)||(51046136-51046200)
chr1 (101-168)||(47719099-47719166)
chr1 (100-145)||(4859084-4859129)
chr1 (101-153)||(31759900-31759952)
chr1 (104-153)||(44287148-44287197)
chr1 (101-157)||(37050931-37050987)
chr1 (128-176)||(38000073-38000121)
chr1 (101-168)||(11410629-11410696)
chr1 (101-168)||(51067886-51067953)
chr1 (93-143)||(41182623-41182673)
chr1 (94-168)||(41973250-41973324)
chr1 (123-157)||(46012399-46012433)
chr1 (102-163)||(5468851-5468912)
chr1 (105-146)||(13953888-13953929)
chr1 (96-149)||(14556569-14556622)
chr1 (101-154)||(23045193-23045246)
chr1 (94-159)||(28213908-28213973)
chr1 (94-151)||(48681942-48681999)
chr1 (94-143)||(49843429-49843478)
chr1 (121-153)||(422569-422601)
chr1 (93-157)||(2613716-2613780)
chr1 (101-157)||(32433098-32433154)
chr1 (101-145)||(47071973-47072017)
chr1 (94-154)||(49222811-49222871)
[»] chr4 (29 HSPs)
chr4 (96-176)||(50380820-50380900)
chr4 (96-157)||(6459927-6459988)
chr4 (94-157)||(51436609-51436672)
chr4 (96-154)||(36569170-36569228)
chr4 (100-154)||(39146643-39146697)
chr4 (94-154)||(14202485-14202545)
chr4 (101-145)||(39595952-39595996)
chr4 (105-157)||(41536928-41536980)
chr4 (101-148)||(47704584-47704631)
chr4 (101-139)||(20515727-20515765)
chr4 (94-140)||(24837493-24837539)
chr4 (102-156)||(37422194-37422248)
chr4 (101-143)||(46779139-46779181)
chr4 (104-154)||(50668345-50668395)
chr4 (88-145)||(2587715-2587772)
chr4 (96-145)||(32923245-32923294)
chr4 (94-147)||(38340333-38340386)
chr4 (101-154)||(42773054-42773107)
chr4 (101-146)||(44857200-44857245)
chr4 (101-154)||(49952575-49952628)
chr4 (101-146)||(54587902-54587947)
chr4 (101-157)||(7371551-7371607)
chr4 (95-143)||(8737725-8737773)
chr4 (94-182)||(25593541-25593628)
chr4 (105-145)||(37381246-37381286)
chr4 (94-154)||(43374278-43374338)
chr4 (105-149)||(52693807-52693851)
chr4 (101-161)||(52699375-52699435)
chr4 (93-137)||(56309323-56309367)
[»] chr2 (27 HSPs)
chr2 (94-168)||(44026603-44026677)
chr2 (102-154)||(19159944-19159996)
chr2 (92-168)||(19967411-19967487)
chr2 (94-154)||(38334639-38334699)
chr2 (94-157)||(8761567-8761630)
chr2 (94-168)||(20455886-20455960)
chr2 (93-142)||(10977077-10977126)
chr2 (114-159)||(17394689-17394734)
chr2 (94-138)||(11846392-11846436)
chr2 (93-148)||(3196554-3196609)
chr2 (94-145)||(18678132-18678183)
chr2 (94-149)||(31837947-31838002)
chr2 (94-157)||(33063981-33064044)
chr2 (101-168)||(41682380-41682446)
chr2 (96-154)||(9519720-9519778)
chr2 (94-156)||(13196695-13196757)
chr2 (94-168)||(22523004-22523078)
chr2 (94-176)||(34977199-34977281)
chr2 (110-176)||(41542967-41543033)
chr2 (101-154)||(5168585-5168638)
chr2 (93-154)||(7537104-7537165)
chr2 (106-155)||(7539037-7539086)
chr2 (101-154)||(7772466-7772519)
chr2 (94-143)||(8775265-8775314)
chr2 (101-145)||(20239345-20239389)
chr2 (101-137)||(38622941-38622977)
chr2 (104-168)||(41853370-41853434)
[»] chr8 (25 HSPs)
chr8 (104-149)||(3456832-3456877)
chr8 (94-150)||(40316851-40316907)
chr8 (94-168)||(7380039-7380113)
chr8 (93-183)||(8717452-8717542)
chr8 (94-168)||(35682684-35682758)
chr8 (101-176)||(574386-574461)
chr8 (93-148)||(18959143-18959198)
chr8 (104-163)||(26695302-26695361)
chr8 (101-168)||(40795379-40795446)
chr8 (94-168)||(6447184-6447258)
chr8 (91-145)||(39975482-39975536)
chr8 (103-145)||(41603065-41603107)
chr8 (94-147)||(10732788-10732841)
chr8 (104-149)||(12133548-12133593)
chr8 (105-162)||(38489200-38489257)
chr8 (101-154)||(45049577-45049630)
chr8 (94-146)||(1230675-1230727)
chr8 (125-157)||(11670777-11670809)
chr8 (89-145)||(17062354-17062410)
chr8 (89-145)||(17585948-17586004)
chr8 (102-166)||(24687782-24687844)
chr8 (94-154)||(27718900-27718960)
chr8 (96-168)||(28580941-28581013)
chr8 (94-154)||(29293172-29293232)
chr8 (101-145)||(41625196-41625240)
[»] chr7 (24 HSPs)
chr7 (96-157)||(429181-429242)
chr7 (104-176)||(27270240-27270312)
chr7 (101-168)||(9893072-9893139)
chr7 (94-145)||(32496881-32496932)
chr7 (101-168)||(34000264-34000331)
chr7 (101-156)||(47960898-47960953)
chr7 (104-154)||(32855525-32855575)
chr7 (94-168)||(39706615-39706689)
chr7 (105-147)||(44639647-44639689)
chr7 (101-154)||(41132446-41132499)
chr7 (124-168)||(16198408-16198452)
chr7 (104-176)||(27263346-27263418)
chr7 (102-142)||(35751389-35751429)
chr7 (102-145)||(21580819-21580862)
chr7 (101-168)||(48527192-48527259)
chr7 (94-176)||(4905271-4905353)
chr7 (93-174)||(2622319-2622400)
chr7 (123-176)||(2962710-2962763)
chr7 (114-155)||(23205367-23205408)
chr7 (94-138)||(12167402-12167446)
chr7 (101-145)||(15015243-15015287)
chr7 (109-149)||(24099246-24099286)
chr7 (94-154)||(29726795-29726855)
chr7 (104-168)||(48837872-48837936)
[»] chr6 (16 HSPs)
chr6 (94-143)||(9311947-9311996)
chr6 (94-154)||(13496111-13496171)
chr6 (94-157)||(9665305-9665368)
chr6 (93-168)||(28951393-28951468)
chr6 (94-168)||(8916466-8916540)
chr6 (101-154)||(12904323-12904376)
chr6 (91-167)||(2213289-2213365)
chr6 (101-168)||(8629688-8629755)
chr6 (94-157)||(10902335-10902398)
chr6 (94-157)||(11148207-11148270)
chr6 (94-167)||(12336319-12336392)
chr6 (101-154)||(23635720-23635773)
chr6 (93-154)||(24438288-24438349)
chr6 (109-157)||(6283946-6283994)
chr6 (101-145)||(9977059-9977103)
chr6 (118-154)||(12459747-12459783)
[»] chr3 (15 HSPs)
chr3 (94-165)||(21331412-21331483)
chr3 (100-154)||(17755122-17755176)
chr3 (100-154)||(19056442-19056496)
chr3 (96-145)||(10843796-10843845)
chr3 (94-158)||(53633619-53633683)
chr3 (94-157)||(7827503-7827566)
chr3 (96-159)||(46337231-46337294)
chr3 (101-159)||(47099036-47099094)
chr3 (94-176)||(48376830-48376912)
chr3 (104-145)||(21160057-21160098)
chr3 (105-146)||(43630432-43630473)
chr3 (129-162)||(45254261-45254294)
chr3 (104-168)||(1743982-1744046)
chr3 (101-157)||(5941297-5941353)
chr3 (101-145)||(42784959-42785003)
[»] scaffold0070 (1 HSPs)
scaffold0070 (102-159)||(42933-42990)
[»] scaffold0445 (1 HSPs)
scaffold0445 (101-168)||(4472-4539)
[»] scaffold0312 (1 HSPs)
scaffold0312 (121-153)||(7971-8003)
[»] scaffold0062 (1 HSPs)
scaffold0062 (96-168)||(7471-7542)
[»] scaffold0008 (1 HSPs)
scaffold0008 (101-145)||(122893-122937)


Alignment Details
Target: chr5 (Bit Score: 488; Significance: 0; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 488; E-Value: 0
Query Start/End: Original strand, 1 - 667
Target Start/End: Complemental strand, 29225280 - 29224616
Alignment:
Q  1 aggtagaaaagtaatcaatgaatcctagtaatcaatgaatccactctcatttattttccgtgttgctatgttgacttctcatgcaa---------gtaaa 91  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||         |||||    
T  29225280 aggtagaaaagtaatcaatgaatcctagtaatcaatgaatccacactcatttattttcagtgttgctatgttgacttctcatgtaaatattcaatgtaaa 29225181  T
Q  92 aatcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccaccgtaaaaaataaatattccatgta 191  Q
    | |||||| ||| ||||||||||    ||| | |||  ||||||||||||||||| |  |||||||||  | ||||| ||||| | ||||||||||||||    
T  29225180 agtcctcgtgagtttaactcaat----atggacaatgtataatatatgtaaggtttgaggttcgaatcctgaccaccataaaagaaaaatattccatgta 29225085  T
Q  192 aaaaataattagtattttcagcattattttatcttgaaatgctaatccatgtcaacatcctgatttgctatgctatgtttcttacagccaacatgtttct 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29225084 aaaaataattagtattttcagcattattttatcttgaaatgctaatccatgtcaacatcctgatttgctatgctatgtttcttacagccaacatgtttct 29224985  T
Q  292 catataagatcaattaaggaaacaaaagtagaacaataaatgtttacaagtatcctagacataggaaagggaactagttgacagtcctaacaaaacctca 391  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29224984 catataacatcaattaaggaaacaaaagtagaacaataaatgttt-caagtatcctagacataggaaagggaactagttgacagtcctaacaaaacctca 29224886  T
Q  392 aatgtagtactaaataaaattggaaatgtatatcaaaatagtgtagcacaagtattagataaaattatatctcacttactttaaagaattagtcattata 491  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29224885 aatgtagtactaaataaaattggaaatgtatatcaaaatagtgtagcacaagtattagataaaattatatctcacttactttaaagaattagtcattata 29224786  T
Q  492 attgtgcatgcgggtactttgttttaccacaaacatttatcacacaagtttaactttaatatacactactagtgttaaacaacttgcaatgtatctttta 591  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29224785 attgtgcatgcgggtactttgttttaccacaaacatttatcacacaagtttaactttaatatacactactagtgttaaacaacttgcaatgtatctttta 29224686  T
Q  592 aactatagttgtgactaattaattcacagannnnnnnaataatatttgataacttaagatggtacctatatatatg 667  Q
    ||||||||||||||||    ||||||||||       |||| ||||||||||||||||||||||||||||| ||||    
T  29224685 aactatagttgtgact----aattcacaga--tttttaatattatttgataacttaagatggtacctatatgtatg 29224616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 24498579 - 24498630
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggt 145  Q
    |||||| |||||||||||| |||||||||||||| ||||| |||||||||||    
T  24498579 tcctcgtgagcttaactcagttgatatgaataatgcataaaatatgtaaggt 24498630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 18981248 - 18981190
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatc 159  Q
    ||||||||||||| || || ||| ||| ||||||||||||||||||||| |||||||||    
T  18981248 gagcttaactcaaatggtaagaacaatgcataatatatgtaaggttcggggttcgaatc 18981190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 146
Target Start/End: Complemental strand, 26676010 - 26675960
Alignment:
Q  96 ctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggtt 146  Q
    |||| |||||||| ||||||| || ||||||||||||||||||||||||||    
T  26676010 ctcgtgagcttaattcaattgttaggaataatacataatatatgtaaggtt 26675960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 146
Target Start/End: Complemental strand, 26947618 - 26947568
Alignment:
Q  96 ctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggtt 146  Q
    |||| |||||||| ||||||| || ||||||||||||||||||||||||||    
T  26947618 ctcgtgagcttaattcaattgttaggaataatacataatatatgtaaggtt 26947568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 176
Target Start/End: Complemental strand, 5107310 - 5107229
Alignment:
Q  95 cctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccaccgtaaaaaa 176  Q
    ||||| |||||||||||| ||| |||||||||| ||||||||||| ||||| ||  ||||||| | || ||||| |||||||    
T  5107310 cctcgtgagcttaactcagttggtatgaataatgcataatatatgcaaggtccgaggttcgaaccccgaccaccataaaaaa 5107229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 7713538 - 7713587
Alignment:
Q  105 ttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    |||||||| |||||||||||||| ||||||||||| |||||| |||||||    
T  7713538 ttaactcagttgatatgaataatgcataatatatgcaaggtttggagttc 7713587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 18872662 - 18872727
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatc 159  Q
    |||||| |||||||||||| ||| |||| | ||| ||||||||||| ||||||||| |||||||||    
T  18872662 tcctcgtgagcttaactcacttgttatggaaaatgcataatatatgcaaggttcggggttcgaatc 18872727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 35131109 - 35131173
Alignment:
Q  93 atcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaa 157  Q
    |||||||  ||||||||||| ||| |||  ||||||||||| ||||| |||||||||||||||||    
T  35131109 atcctcgtaagcttaactcagttgttatcgataatacataaaatatgcaaggttcggagttcgaa 35131173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 149
Target Start/End: Original strand, 42659587 - 42659627
Alignment:
Q  109 ctcaattgatatgaataatacataatatatgtaaggttcgg 149  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  42659587 ctcaattgatataaataatgcataatatatgtaaggttcgg 42659627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 168
Target Start/End: Original strand, 18697776 - 18697818
Alignment:
Q  125 aatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    |||||||||||||||||| ||||||||||||||| |||||||||    
T  18697776 aatacataatatatgtaacgttcggagttcgaat-tcggccacc 18697818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 25604059 - 25603992
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    ||||||| |||| |||||||| | | | ||||||||||| ||||||||| ||||||||| ||||||||    
T  25604059 gagcttagctcagttgatatggacagtgcataatatatgcaaggttcggggttcgaatcccggccacc 25603992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 94 - 176
Target Start/End: Complemental strand, 11637638 - 11637556
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccaccgtaaaaaa 176  Q
    |||||| |||||||||||| ||| |||| | ||| ||||| ||||| ||||||||| ||||||| | || ||||| |||||||    
T  11637638 tcctcgtgagcttaactcagttggtatggacaatgcataaaatatgcaaggttcggggttcgaaccccgaccaccataaaaaa 11637556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 13864341 - 13864399
Alignment:
Q  96 ctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    |||| |||||||||||| ||| |||||| ||||||||||||||| ||||| ||| ||||    
T  13864341 ctcgtgagcttaactcagttggtatgaacaatacataatatatgcaaggtccggggttc 13864399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 94 - 148
Target Start/End: Original strand, 29695010 - 29695064
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcg 148  Q
    |||||| || ||||||||| |||||||| | ||| ||||||||||||||||||||    
T  29695010 tcctcgtgaccttaactcagttgatatggacaatgcataatatatgtaaggttcg 29695064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 101 - 143
Target Start/End: Original strand, 36170057 - 36170099
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaag 143  Q
    |||||||||||||||| || ||||||| |||||||||||||||    
T  36170057 gagcttaactcaattgctaggaataatgcataatatatgtaag 36170099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 94 - 168
Target Start/End: Complemental strand, 40716015 - 40715941
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    |||||| ||||||| ||||||||||||| | ||| ||||||||||| ||||| ||| |||| || | ||||||||    
T  40716015 tcctcgtgagcttagctcaattgatatggacaatgcataatatatgcaaggtccggggttcaaaccccggccacc 40715941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 104 - 138
Target Start/End: Complemental strand, 42178861 - 42178827
Alignment:
Q  104 cttaactcaattgatatgaataatacataatatat 138  Q
    |||||||||||||||| ||||||||||||||||||    
T  42178861 cttaactcaattgataagaataatacataatatat 42178827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 5614770 - 5614811
Alignment:
Q  104 cttaactcaattgatatgaataatacataatatatgtaaggt 145  Q
    ||||||||| |||||||| ||||| |||||||||||||||||    
T  5614770 cttaactcagttgatatggataatgcataatatatgtaaggt 5614811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 157
Target Start/End: Complemental strand, 8545053 - 8544992
Alignment:
Q  96 ctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaa 157  Q
    |||| |||||||||||| |||||| | | ||| ||||||||||| ||||| |||||||||||    
T  8545053 ctcgtgagcttaactcagttgataaggacaatgcataatatatgcaaggtccggagttcgaa 8544992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 157
Target Start/End: Complemental strand, 23118115 - 23118054
Alignment:
Q  96 ctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaa 157  Q
    |||| |||||||||||| |||||| | | ||| |||||||||||||||||| || |||||||    
T  23118115 ctcgtgagcttaactcagttgataaggacaatgcataatatatgtaaggtttggggttcgaa 23118054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 25862003 - 25861939
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    ||||||| |||||||| |||||||||   |||||||||||||||| |||||||| || | ||||||||    
T  25862003 gagcttagctcaattggtatgaataa---ataatatatgtaaggtccggagttcaaaccccggccacc 25861939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 25928909 - 25928950
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataata 135  Q
    |||||| ||||||||||||||||||||| | |||||||||||    
T  25928909 tcctcgtgagcttaactcaattgatatggacaatacataata 25928950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 337
Target Start/End: Original strand, 29146715 - 29146752
Alignment:
Q  300 atcaattaaggaaacaaaagtagaacaataaatgttta 337  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  29146715 atcatttaaggaaacaaaagtagaaaaataaatgttta 29146752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 36623238 - 36623189
Alignment:
Q  96 ctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggt 145  Q
    |||| |||||||||||| |||||| ||||||| ||||||||||| |||||    
T  36623238 ctcgtgagcttaactcagttgataagaataatgcataatatatgcaaggt 36623189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 26034672 - 26034620
Alignment:
Q  96 ctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcg 148  Q
    |||| |||||||||||| ||| |||||| ||| ||||||||||| ||||||||    
T  26034672 ctcgtgagcttaactcagttggtatgaacaatgcataatatatgaaaggttcg 26034620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 94 - 154
Target Start/End: Complemental strand, 33369479 - 33369419
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    |||||| |||||||||||| ||| |||||| |||||||||| |||| || |||||| ||||    
T  33369479 tcctcgtgagcttaactcagttggtatgaacaatacataatgtatgcaacgttcggggttc 33369419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 157
Target Start/End: Complemental strand, 37073823 - 37073771
Alignment:
Q  105 ttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaa 157  Q
    |||||||||||| |||| |  || ||||||||||||||||||||| |||||||    
T  37073823 ttaactcaattggtatggactatgcataatatatgtaaggttcggggttcgaa 37073771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 38370755 - 38370807
Alignment:
Q  104 cttaactcaattgatatgaataatacataatatatgtaaggttcggagttcga 156  Q
    |||||||||||| |||| || ||| ||||| ||||||||||| ||||||||||    
T  38370755 cttaactcaattaatataaacaatgcataaaatatgtaaggtccggagttcga 38370807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 4e-18; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 42146310 - 42146373
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaa 157  Q
    |||||| ||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||    
T  42146310 tcctcgtgagcttaactcaattgatacgaataatatataatatatgcaaggttcggagttcgaa 42146373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 51046136 - 51046200
Alignment:
Q  93 atcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaa 157  Q
    ||||||| ||| |||||||| ||| |||||| ||||||||| |||||||||||||||||||||||    
T  51046136 atcctcgtgagtttaactcagttggtatgaacaatacataaaatatgtaaggttcggagttcgaa 51046200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 47719166 - 47719099
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    |||||||||||| ||| || | ||||| ||||||||||| ||||||||||||||||||| ||||||||    
T  47719166 gagcttaactcagttggtaaggataatgcataatatatgcaaggttcggagttcgaatcccggccacc 47719099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 4859084 - 4859129
Alignment:
Q  100 cgagcttaactcaattgatatgaataatacataatatatgtaaggt 145  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||    
T  4859084 cgagcttaactcagttgataagaataatacataatatatgtaaggt 4859129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 31759952 - 31759900
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagtt 153  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||||| |||||||    
T  31759952 gagcttaactcaattgatatggataatgcataatatatgcaaggtccggagtt 31759900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 44287197 - 44287148
Alignment:
Q  104 cttaactcaattgatatgaataatacataatatatgtaaggttcggagtt 153  Q
    |||| |||||||| |||||||||||| |||||||| ||||||||||||||    
T  44287197 cttagctcaattggtatgaataatacgtaatatatataaggttcggagtt 44287148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 37050931 - 37050987
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaa 157  Q
    |||||||||||||||| |||||||||| ||||| ||||| ||||| ||| |||||||    
T  37050931 gagcttaactcaattggtatgaataatgcataaaatatgcaaggtccggggttcgaa 37050987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 38000073 - 38000121
Alignment:
Q  128 acataatatatgtaaggttcggagttcgaatctcggccaccgtaaaaaa 176  Q
    |||||||||||||||||||||| ||||||||  |||||||| |||||||    
T  38000073 acataatatatgtaaggttcggggttcgaattccggccaccataaaaaa 38000121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 11410629 - 11410696
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    |||||||||||| ||| |||||| ||||||||| |||||||||||  || ||||||||| || |||||    
T  11410629 gagcttaactcagttggtatgaacaatacataaaatatgtaaggtctggggttcgaatcccgaccacc 11410696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 51067953 - 51067886
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    |||||||||||| ||| || ||||||||||||||||||| |||| |||| |||| |||| || |||||    
T  51067953 gagcttaactcagttggtaagaataatacataatatatgcaaggctcggggttcaaatcccgaccacc 51067886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 41182673 - 41182623
Alignment:
Q  93 atcctcgcgagcttaactcaattgatatgaataatacataatatatgtaag 143  Q
    ||||||| |||||||||||| ||| |||||||||| |||||||| ||||||    
T  41182673 atcctcgtgagcttaactcagttggtatgaataatgcataatatgtgtaag 41182623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 94 - 168
Target Start/End: Original strand, 41973250 - 41973324
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    ||||||||||||||||| ||||| || | | ||| ||||||||||| ||||| ||| ||||||| | ||||||||    
T  41973250 tcctcgcgagcttaacttaattggtagggacaatgcataatatatgcaaggtccggggttcgaaccccggccacc 41973324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 123 - 157
Target Start/End: Complemental strand, 46012433 - 46012399
Alignment:
Q  123 ataatacataatatatgtaaggttcggagttcgaa 157  Q
    ||||||||||||||||| |||||||||||||||||    
T  46012433 ataatacataatatatgcaaggttcggagttcgaa 46012399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 5468851 - 5468912
Alignment:
Q  102 agcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcgg 163  Q
    ||||||||||| |||||| |||||||  ||||||||||||| ||| |||||| |||| ||||    
T  5468851 agcttaactcagttgataggaataatgtataatatatgtaaagtttggagtttgaatttcgg 5468912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 13953929 - 13953888
Alignment:
Q  105 ttaactcaattgatatgaataatacataatatatgtaaggtt 146  Q
    ||||||||||||||||||| ||| ||||||||||| ||||||    
T  13953929 ttaactcaattgatatgaacaatgcataatatatgcaaggtt 13953888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 14556622 - 14556569
Alignment:
Q  96 ctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcgg 149  Q
    ||||||||||||||||||| |||||||| |||  ||||||||| ||| ||||||    
T  14556622 ctcgcgagcttaactcaatcgatatgaacaatgtataatatatataaagttcgg 14556569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 23045193 - 23045246
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    |||||||||||  || ||||||| ||| ||||||||||||||||| ||||||||    
T  23045193 gagcttaactccgttaatatgaacaatgcataatatatgtaaggtccggagttc 23045246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 28213908 - 28213973
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatc 159  Q
    |||||| |||||||| ||| |||||||  |||||| ||||||||||| || || ||||||||||||    
T  28213908 tcctcgtgagcttaattcagttgatatacataatatataatatatgtgagatttggagttcgaatc 28213973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 48681999 - 48681942
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggag 151  Q
    |||||| ||||||| |||| ||| |||||| ||| ||||||||||| |||||||||||    
T  48681999 tcctcgtgagcttagctcagttggtatgaacaatgcataatatatgcaaggttcggag 48681942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 49843429 - 49843478
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaag 143  Q
    |||||| |||||||||||||||| | |||| ||| |||||||||||||||    
T  49843429 tcctcgtgagcttaactcaattggtttgaacaatgcataatatatgtaag 49843478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 121 - 153
Target Start/End: Original strand, 422569 - 422601
Alignment:
Q  121 gaataatacataatatatgtaaggttcggagtt 153  Q
    ||||||| |||||||||||||||||||||||||    
T  422569 gaataatgcataatatatgtaaggttcggagtt 422601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 2613716 - 2613780
Alignment:
Q  93 atcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaa 157  Q
    ||||||| ||||||| |||| ||| |||| | ||| ||||| ||||||||||||||| |||||||    
T  2613716 atcctcgtgagcttagctcagttggtatggacaatgcataaaatatgtaaggttcggggttcgaa 2613780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 32433154 - 32433098
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaa 157  Q
    |||||||||||| | |||||||| ||| ||||| |||| |||||||||| |||||||    
T  32433154 gagcttaactcagtcgatatgaaaaatgcataaaatatataaggttcggggttcgaa 32433098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 47072017 - 47071973
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggt 145  Q
    |||||||||||||||| || ||| ||||||||||||||| |||||    
T  47072017 gagcttaactcaattggtaagaacaatacataatatatgcaaggt 47071973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 49222811 - 49222871
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    |||||| ||||||||||||||||||| ||| ||| || |||||||| ||||| ||| ||||    
T  49222811 tcctcgtgagcttaactcaattgataggaacaatgcacaatatatgcaaggtccggggttc 49222871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 50380900 - 50380820
Alignment:
Q  96 ctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccaccgtaaaaaa 176  Q
    |||| |||||||| ||| ||| |||||| ||| ||||||||||||||||| |||||||| ||||||| ||||| |||||||    
T  50380900 ctcgtgagcttaattcagttggtatgaacaatgcataatatatgtaaggtccggagttcaaatctcgaccaccataaaaaa 50380820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 96 - 157
Target Start/End: Complemental strand, 6459988 - 6459927
Alignment:
Q  96 ctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaa 157  Q
    |||| |||||||||||| |||||||| | ||| ||||||||||||||||| |||||||||||    
T  6459988 ctcgtgagcttaactcagttgatatggacaatgcataatatatgtaaggtccggagttcgaa 6459927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 94 - 157
Target Start/End: Complemental strand, 51436672 - 51436609
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaa 157  Q
    |||||| || ||||||||| |||||| ||| ||| ||||||||||| |||||||||||||||||    
T  51436672 tcctcgtgaacttaactcagttgatacgaacaatgcataatatatgcaaggttcggagttcgaa 51436609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 36569170 - 36569228
Alignment:
Q  96 ctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    |||| ||||||| |||||||  |||||| ||| ||||||||||||||||||||||||||    
T  36569170 ctcgtgagcttagctcaattagtatgaaaaatgcataatatatgtaaggttcggagttc 36569228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 154
Target Start/End: Original strand, 39146643 - 39146697
Alignment:
Q  100 cgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    ||||||||||||| |||||||| | ||| ||||||||| ||||||||||||||||    
T  39146643 cgagcttaactcagttgatatggacaatgcataatataagtaaggttcggagttc 39146697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 154
Target Start/End: Complemental strand, 14202545 - 14202485
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    |||||| |||||||||||| ||||| || ||||| ||||||||||||||||| ||| ||||    
T  14202545 tcctcgtgagcttaactcagttgatttggataatgcataatatatgtaaggtccggggttc 14202485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 39595996 - 39595952
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggt 145  Q
    ||||||| |||||||||||| |||||||||||||||||| |||||    
T  39595996 gagcttagctcaattgatataaataatacataatatatgcaaggt 39595952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 157
Target Start/End: Original strand, 41536928 - 41536980
Alignment:
Q  105 ttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaa 157  Q
    ||||||||||||||| | | ||||||||||||||| |||||||| ||||||||    
T  41536928 ttaactcaattgataaggacaatacataatatatgcaaggttcgaagttcgaa 41536980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 148
Target Start/End: Original strand, 47704584 - 47704631
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcg 148  Q
    |||||||||||| ||| ||||||||||  |||||||||||||||||||    
T  47704584 gagcttaactcagttggtatgaataatgtataatatatgtaaggttcg 47704631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 101 - 139
Target Start/End: Complemental strand, 20515765 - 20515727
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatg 139  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  20515765 gagcttaactcaattgataggaatattacataatatatg 20515727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 94 - 140
Target Start/End: Complemental strand, 24837539 - 24837493
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgt 140  Q
    |||||| |||||||||| | |||||||||| ||||||||||||||||    
T  24837539 tcctcgtgagcttaacttagttgatatgaacaatacataatatatgt 24837493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 37422194 - 37422248
Alignment:
Q  102 agcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcga 156  Q
    ||||||||||| ||| ||| || ||| |||||||| |||||||||||||||||||    
T  37422194 agcttaactcagttggtattaacaatgcataatatgtgtaaggttcggagttcga 37422248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 101 - 143
Target Start/End: Original strand, 46779139 - 46779181
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaag 143  Q
    ||||||||||||||||||| ||||||| | |||||||||||||    
T  46779139 gagcttaactcaattgataggaataatgcgtaatatatgtaag 46779181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 50668345 - 50668395
Alignment:
Q  104 cttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    ||||| ||| ||| |||||| ||||||||||||||||||||||||| ||||    
T  50668345 cttaattcagttggtatgaacaatacataatatatgtaaggttcggggttc 50668395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 2587772 - 2587715
Alignment:
Q  88 taaaaatcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggt 145  Q
    |||| ||| ||| ||||||| |||||||| |||| ||||| |||||||||||||||||    
T  2587772 taaatatcatcgtgagcttagctcaattggtatggataatgcataatatatgtaaggt 2587715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 32923294 - 32923245
Alignment:
Q  96 ctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggt 145  Q
    |||| |||||||||||| ||| |||||| ||| |||||||||||||||||    
T  32923294 ctcgtgagcttaactcagttggtatgaacaatgcataatatatgtaaggt 32923245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 38340386 - 38340333
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttc 147  Q
    |||||| |||||||||||| ||| |||| | ||||||||| |||||||||||||    
T  38340386 tcctcgtgagcttaactcagttggtatggacaatacataaaatatgtaaggttc 38340333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 42773054 - 42773107
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    |||| ||||||| |||||||| | ||||||||| ||||||||||||||| ||||    
T  42773054 gagcataactcagttgatatggacaatacataaaatatgtaaggttcggtgttc 42773107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 44857245 - 44857200
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggtt 146  Q
    |||||||||||||||| |||  ||||||||||||||||| ||||||    
T  44857245 gagcttaactcaattggtatagataatacataatatatgcaaggtt 44857200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 49952628 - 49952575
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    |||||||||||||||||| || | ||| ||||||||||||||||| ||| ||||    
T  49952628 gagcttaactcaattgatttggacaatgcataatatatgtaaggtccggggttc 49952575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 54587902 - 54587947
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggtt 146  Q
    |||| ||||||| |||||||| ||||| ||||||||||||||||||    
T  54587902 gagcataactcagttgatatggataatgcataatatatgtaaggtt 54587947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 7371607 - 7371551
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaa 157  Q
    |||||||||||| |||||| | | ||||||||||||||| ||||| ||| |||||||    
T  7371607 gagcttaactcagttgataaggacaatacataatatatgcaaggtccggggttcgaa 7371551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 95 - 143
Target Start/End: Original strand, 8737725 - 8737773
Alignment:
Q  95 cctcgcgagcttaactcaattgatatgaataatacataatatatgtaag 143  Q
    ||||| ||||||  |||||||||||| || |||||||||||||||||||    
T  8737725 cctcgtgagcttcgctcaattgatataaacaatacataatatatgtaag 8737773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 25593628 - 25593541
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccaccgtaaaaaataaata 182  Q
    |||||| ||||||| | ||||||||||| |  || ||||| ||||| |||||||||||||| |||| ||| |||| ||||||| |||||    
T  25593628 tcctcgtgagcttagc-caattgatatggacgatgcataaaatatgcaaggttcggagttcaaatcccggtcaccataaaaaaaaaata 25593541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 37381286 - 37381246
Alignment:
Q  105 ttaactcaattgatatgaataatacataatatatgtaaggt 145  Q
    ||||||||||||||||  ||||| |||||||||||||||||    
T  37381286 ttaactcaattgatatagataatgcataatatatgtaaggt 37381246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 94 - 154
Target Start/End: Complemental strand, 43374338 - 43374278
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    |||||| ||||||| |||| |||||||| | ||| ||||| ||||| ||||||||||||||    
T  43374338 tcctcgtgagcttagctcagttgatatggacaatgcataaaatatgcaaggttcggagttc 43374278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 149
Target Start/End: Original strand, 52693807 - 52693851
Alignment:
Q  105 ttaactcaattgatatgaataatacataatatatgtaaggttcgg 149  Q
    |||||||| || ||| ||| |||||||||||||||||||||||||    
T  52693807 ttaactcagttaataggaagaatacataatatatgtaaggttcgg 52693851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 52699375 - 52699435
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctc 161  Q
    ||||||| |||||||  || ||||||| ||||||||||||||||||  ||||| |||||||    
T  52699375 gagcttatctcaattagtaagaataatgcataatatatgtaaggttttgagtttgaatctc 52699435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 56309367 - 56309323
Alignment:
Q  93 atcctcgcgagcttaactcaattgatatgaataatacataatata 137  Q
    ||||||| ||||||||||||||||||||| | ||| |||||||||    
T  56309367 atcctcgtgagcttaactcaattgatatggacaatgcataatata 56309323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.000000000001; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 168
Target Start/End: Original strand, 44026603 - 44026677
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    |||||| |||||||||||||||| |||| | ||  ||||||||||||||||||||| |||| |||||||| ||||    
T  44026603 tcctcgtgagcttaactcaattggtatggacaacgcataatatatgtaaggttcggggttcaaatctcggtcacc 44026677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 19159944 - 19159996
Alignment:
Q  102 agcttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    ||||||||||| |||||||||| ||| ||||||||||| ||||||||||||||    
T  19159944 agcttaactcagttgatatgaacaatgcataatatatgcaaggttcggagttc 19159996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 168
Target Start/End: Original strand, 19967411 - 19967487
Alignment:
Q  92 aatcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    |||||||| ||||||| |||| |||||||||| ||| |||||||| || |||||||||||||| || |||| |||||    
T  19967411 aatcctcgtgagcttagctcagttgatatgaacaatgcataatatgtgcaaggttcggagttcaaacctcgaccacc 19967487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 38334639 - 38334699
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    |||||| ||| |||| ||||||| ||||||||||| |||||||||||||||||| ||||||    
T  38334639 tcctcgtgagattaattcaattggtatgaataatatataatatatgtaaggttcagagttc 38334699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 94 - 157
Target Start/End: Complemental strand, 8761630 - 8761567
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaa 157  Q
    |||||| |||||||||||| ||| |||| | |||||||||||||||||||| | ||||||||||    
T  8761630 tcctcgtgagcttaactcagttggtatggacaatacataatatatgtaagggttggagttcgaa 8761567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 168
Target Start/End: Original strand, 20455886 - 20455960
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    |||||| ||||||| |||||||| |||| | ||| ||||||||||| ||||| ||| ||||||||| ||||||||    
T  20455886 tcctcgtgagcttagctcaattggtatggacaatgcataatatatgcaaggtccggggttcgaatcccggccacc 20455960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 142
Target Start/End: Complemental strand, 10977126 - 10977077
Alignment:
Q  93 atcctcgcgagcttaactcaattgatatgaataatacataatatatgtaa 142  Q
    ||||||| |||||||||||  |||||||||| ||||||||||||||||||    
T  10977126 atcctcgtgagcttaactcggttgatatgaaaaatacataatatatgtaa 10977077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 159
Target Start/End: Original strand, 17394689 - 17394734
Alignment:
Q  114 ttgatatgaataatacataatatatgtaaggttcggagttcgaatc 159  Q
    |||||| ||||||||||||||||||||||||||||| ||| |||||    
T  17394689 ttgataggaataatacataatatatgtaaggttcggggtttgaatc 17394734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 11846392 - 11846436
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatat 138  Q
    ||||||||||||||||||| ||| || ||||||||||||||||||    
T  11846392 tcctcgcgagcttaactcagttggtaggaataatacataatatat 11846436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 3196554 - 3196609
Alignment:
Q  93 atcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcg 148  Q
    ||||||| ||||||  |||| |||||||||| ||| ||||||||||||||||||||    
T  3196554 atcctcgtgagctttgctcagttgatatgaacaatgcataatatatgtaaggttcg 3196609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 18678132 - 18678183
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggt 145  Q
    |||||| |||||||||||||||  |||  |||||||||||||||||||||||    
T  18678132 tcctcgtgagcttaactcaattagtattgataatacataatatatgtaaggt 18678183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 31838002 - 31837947
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcgg 149  Q
    |||||| || ||||||||||||| |||| |||||  ||||||||||||||||||||    
T  31838002 tcctcgtgaacttaactcaattggtatggataatgtataatatatgtaaggttcgg 31837947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 33063981 - 33064044
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaa 157  Q
    |||||| ||||||| |||| |||||||| | ||| ||||||||||| ||||| |||||||||||    
T  33063981 tcctcgtgagcttagctcagttgatatggacaatgcataatatatgcaaggtccggagttcgaa 33064044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 41682446 - 41682380
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    |||||||||||| ||| ||| |||||| |||||||||||||||||| || |||| |||||| ||||||    
T  41682446 gagcttaactcagttggtataaataatgcataatatatgtaaggttagg-gttcaaatctcagccacc 41682380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 9519778 - 9519720
Alignment:
Q  96 ctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    |||| ||||||| ||||||||||||| | ||| ||||||||||| |||||||| |||||    
T  9519778 ctcgtgagcttagctcaattgatatggacaatgcataatatatgcaaggttcgaagttc 9519720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 13196695 - 13196757
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcga 156  Q
    |||||| || ||||||||| ||| |||||| ||| ||||||||||| ||||||||| ||||||    
T  13196695 tcctcgtgaacttaactcagttggtatgaacaatgcataatatatgcaaggttcggggttcga 13196757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 94 - 168
Target Start/End: Complemental strand, 22523078 - 22523004
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    |||||| ||||||| |||| ||| |||| | ||||||||||||||| ||||||||  |||| |||| ||||||||    
T  22523078 tcctcgtgagcttagctcagttggtatggacaatacataatatatgcaaggttcgaggttcaaatcccggccacc 22523004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 34977199 - 34977281
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccaccgtaaaaaa 176  Q
    |||||| |||||||||||| ||| |||| | ||| ||||||||||| ||||| |||||||  || | |||||||| |||||||    
T  34977199 tcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtccggagtttaaaccccggccaccataaaaaa 34977281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 41543033 - 41542967
Alignment:
Q  110 tcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccaccgtaaaaaa 176  Q
    ||||||| |||| | ||| ||||||||||||||||||||| |||  || |||||||||| |||||||    
T  41543033 tcaattggtatggacaatgcataatatatgtaaggttcggggtttaaacctcggccaccataaaaaa 41542967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 5168638 - 5168585
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    |||||||||||| |||||| | ||||| ||||||||||| ||||||||| ||||    
T  5168638 gagcttaactcagttgatagggataatgcataatatatgcaaggttcggggttc 5168585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 154
Target Start/End: Original strand, 7537104 - 7537165
Alignment:
Q  93 atcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    ||||||| ||| |||||||| |||||| ||| ||| ||||||||||| ||||| ||||||||    
T  7537104 atcctcgtgagattaactcagttgataggaacaatgcataatatatgcaaggtccggagttc 7537165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 7539037 - 7539086
Alignment:
Q  106 taactcaattgatatgaataatacataatatatgtaaggttcggagttcg 155  Q
    |||||||||||||||| |||||  |||||||||| |||||||||| ||||    
T  7539037 taactcaattgatatggataatgtataatatatgcaaggttcggaattcg 7539086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 7772519 - 7772466
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    |||||||||||||||| || | ||||| ||||||||||| ||||| ||||||||    
T  7772519 gagcttaactcaattggtaaggataatgcataatatatgcaaggtccggagttc 7772466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 8775265 - 8775314
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaag 143  Q
    |||||| |||||||  ||| |||||| |||||||||||||||||||||||    
T  8775265 tcctcgtgagcttaggtcagttgataggaataatacataatatatgtaag 8775314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 20239345 - 20239389
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggt 145  Q
    ||||||||||||||||||| | ||||| ||||||||||| |||||    
T  20239345 gagcttaactcaattgatagggataatgcataatatatgcaaggt 20239389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 101 - 137
Target Start/End: Original strand, 38622941 - 38622977
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatata 137  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  38622941 gagcttaactcaattaatatgaataatgcataatata 38622977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 41853370 - 41853434
Alignment:
Q  104 cttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    |||||||||  |||||| || ||| ||||||||||||||||| ||| ||||||| | ||||||||    
T  41853370 cttaactcagctgatataaacaatgcataatatatgtaaggtccggcgttcgaaccccggccacc 41853434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000004; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 104 - 149
Target Start/End: Complemental strand, 3456877 - 3456832
Alignment:
Q  104 cttaactcaattgatatgaataatacataatatatgtaaggttcgg 149  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||    
T  3456877 cttaactcaattgatatgaacaatgcataatatatgtaaggttcgg 3456832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 150
Target Start/End: Original strand, 40316851 - 40316907
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcgga 150  Q
    |||||| ||||||| |||| |||||||||||||| |||||||||||||| |||||||    
T  40316851 tcctcgtgagcttatctcagttgatatgaataatgcataatatatgtaaagttcgga 40316907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 168
Target Start/End: Original strand, 7380039 - 7380113
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    |||||| ||||||| |||||||| |||| | ||||||||||||||  |||||| || ||||||||| ||||||||    
T  7380039 tcctcgtgagcttagctcaattgttatggacaatacataatatatacaaggttgggggttcgaatcccggccacc 7380113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 183
Target Start/End: Complemental strand, 8717542 - 8717452
Alignment:
Q  93 atcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccaccgtaaaaaataaatat 183  Q
    ||||||| ||| ||| |||| ||| |||| | ||| ||||||||||| ||||||||| |||| || |||||||||| ||||||| ||||||    
T  8717542 atcctcgtgagtttagctcagttggtatggacaatgcataatatatgcaaggttcggggttcaaacctcggccaccataaaaaagaaatat 8717452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 168
Target Start/End: Complemental strand, 35682758 - 35682684
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    |||||| ||||||| |||| ||| || | | ||| |||||||||||||||||||||  |||||||||||||||||    
T  35682758 tcctcgtgagcttagctcagttggtacggacaatccataatatatgtaaggttcgggtttcgaatctcggccacc 35682684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 574386 - 574461
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccaccgtaaaaaa 176  Q
    ||||||| |||| |||||||  | ||| ||||||||||||||||| |||||||||||  ||| ||||| |||||||    
T  574386 gagcttagctcagttgatatagacaatgcataatatatgtaaggtccggagttcgaacttcgaccaccataaaaaa 574461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 18959143 - 18959198
Alignment:
Q  93 atcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcg 148  Q
    |||||| ||||||||||||||||| || | ||||| ||||||||||| ||||||||    
T  18959143 atcctctcgagcttaactcaattgttagggataatgcataatatatgcaaggttcg 18959198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 26695361 - 26695302
Alignment:
Q  104 cttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcgg 163  Q
    |||| |||||||| || | ||||||||||||||||| |||||||| ||||| ||||||||    
T  26695361 cttagctcaattgttaaggataatacataatatatgcaaggttcgaagttctaatctcgg 26695302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 40795379 - 40795446
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    |||||||||||| ||| |||||| ||||||||||||||| ||||| ||| |||| |||  ||||||||    
T  40795379 gagcttaactcagttggtatgaacaatacataatatatgcaaggtccggggttctaattccggccacc 40795446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 94 - 168
Target Start/End: Original strand, 6447184 - 6447258
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    |||||| ||| |||||||| ||| |||| | ||| ||||||||||| ||||| |||||||| |||||| ||||||    
T  6447184 tcctcgtgagtttaactcagttggtatggacaatgcataatatatgcaaggtccggagttcaaatctcagccacc 6447258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 39975482 - 39975536
Alignment:
Q  91 aaatcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggt 145  Q
    |||||||||  |||||| |||||||| || ||| |||||||||||||||||||||    
T  39975482 aaatcctcgtaagcttagctcaattggtaagaacaatacataatatatgtaaggt 39975536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 103 - 145
Target Start/End: Original strand, 41603065 - 41603107
Alignment:
Q  103 gcttaactcaattgatatgaataatacataatatatgtaaggt 145  Q
    |||||||||||||| |||||| ||| |||||||||||||||||    
T  41603065 gcttaactcaattggtatgaacaatgcataatatatgtaaggt 41603107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 10732841 - 10732788
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttc 147  Q
    |||||| |||||||||||||||| |||||| ||| ||||||||||  |||||||    
T  10732841 tcctcgtgagcttaactcaattggtatgaacaatgcataatatatacaaggttc 10732788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 149
Target Start/End: Complemental strand, 12133593 - 12133548
Alignment:
Q  104 cttaactcaattgatatgaataatacataatatatgtaaggttcgg 149  Q
    ||||||| |||||||||||| ||| ||| |||||||||||||||||    
T  12133593 cttaactgaattgatatgaacaatgcattatatatgtaaggttcgg 12133548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 38489257 - 38489200
Alignment:
Q  105 ttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcg 162  Q
    |||||||| |||||| ||| ||| ||| ||||||| ||||||||| ||||||||||||    
T  38489257 ttaactcagttgataagaacaatgcatgatatatgcaaggttcggggttcgaatctcg 38489200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 45049577 - 45049630
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    |||||| ||||||||| |||| ||||| ||||| ||||||||||||||| ||||    
T  45049577 gagcttgactcaattggtatggataatgcataaaatatgtaaggttcggggttc 45049630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 1230727 - 1230675
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggtt 146  Q
    |||||||||| |||||||| ||| || ||| ||| ||||||||||||||||||    
T  1230727 tcctcgcgagtttaactcagttggtaggaacaatgcataatatatgtaaggtt 1230675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 157
Target Start/End: Original strand, 11670777 - 11670809
Alignment:
Q  125 aatacataatatatgtaaggttcggagttcgaa 157  Q
    ||||||||||||||||||||| |||||||||||    
T  11670777 aatacataatatatgtaaggtccggagttcgaa 11670809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 17062410 - 17062354
Alignment:
Q  89 aaaaatcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggt 145  Q
    |||| |||||| |||||||||||| |||||||  | ||||||||||||||| |||||    
T  17062410 aaaagtcctcgtgagcttaactcagttgatatagacaatacataatatatgcaaggt 17062354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 17585948 - 17586004
Alignment:
Q  89 aaaaatcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggt 145  Q
    |||| |||||| |||||||||||| |||||||  | ||||||||||||||| |||||    
T  17585948 aaaagtcctcgtgagcttaactcagttgatatagacaatacataatatatgcaaggt 17586004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 24687782 - 24687844
Alignment:
Q  102 agcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggcca 166  Q
    |||||| |||||||||||| || ||| |||||||||||||||| ||||| ||||||| |||||||    
T  24687782 agcttagctcaattgatataaacaatgcataatatatgtaagg-tcgga-ttcgaatttcggcca 24687844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 94 - 154
Target Start/End: Complemental strand, 27718960 - 27718900
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    |||||| ||||||| |||| |||||||| | ||| ||||||||||| ||||| ||||||||    
T  27718960 tcctcgtgagcttagctcagttgatatggacaatgcataatatatgcaaggtccggagttc 27718900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 28580941 - 28581013
Alignment:
Q  96 ctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    |||| ||||||  |||| ||| |||||||||| ||||| ||||||||||||||| |||| |||| || |||||    
T  28580941 ctcgtgagcttggctcagttggtatgaataatgcataaaatatgtaaggttcggggttcaaatcccgaccacc 28581013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 29293172 - 29293232
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    |||||| |||||||||||| || ||||  | |||| |||||||||||||||| ||||||||    
T  29293172 tcctcgtgagcttaactcagttaatatagacaatatataatatatgtaaggtccggagttc 29293232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 41625196 - 41625240
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggt 145  Q
    ||||||| |||| ||| |||||||||| |||||||||||||||||    
T  41625196 gagcttagctcagttggtatgaataatgcataatatatgtaaggt 41625240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000004; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 96 - 157
Target Start/End: Complemental strand, 429242 - 429181
Alignment:
Q  96 ctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaa 157  Q
    |||| |||||||||||| |||||||| ||||||||||||||||| |||||| ||||| ||||    
T  429242 ctcgtgagcttaactcagttgatatggataatacataatatatgcaaggtttggagtccgaa 429181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 27270240 - 27270312
Alignment:
Q  104 cttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccaccgtaaaaaa 176  Q
    ||||||||| ||| |||| | ||| ||||||||||| ||||||||||||||||| ||| |||||| |||||||    
T  27270240 cttaactcagttggtatggacaatgcataatatatgcaaggttcggagttcgaacctcagccaccataaaaaa 27270312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 9893139 - 9893072
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    ||||||| ||||||||||||| | ||||||||| ||||| |||||||| ||||| |||| ||||||||    
T  9893139 gagcttatctcaattgatatggacaatacataaaatatgcaaggttcgaagttcaaatcccggccacc 9893072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 32496881 - 32496932
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggt 145  Q
    ||||||||||||||||||||||   ||||| |||||||||||||||||||||    
T  32496881 tcctcgcgagcttaactcaattagcatgaacaatacataatatatgtaaggt 32496932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 34000264 - 34000331
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    |||||||||||| |||||| | ||||| ||||||||||||||||||||| |||| |||  ||||||||    
T  34000264 gagcttaactcagttgataaggataatgcataatatatgtaaggttcggggttcaaataccggccacc 34000331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 47960898 - 47960953
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcga 156  Q
    ||||||||||||||||||| | | |||||||||||||||  |||||||||||||||    
T  47960898 gagcttaactcaattgataaggacaatacataatatatgcgaggttcggagttcga 47960953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 32855525 - 32855575
Alignment:
Q  104 cttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    ||||||||| |||||||||||||| ||||||||||| || |||||||||||    
T  32855525 cttaactcagttgatatgaataatgcataatatatgcaaagttcggagttc 32855575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 168
Target Start/End: Original strand, 39706615 - 39706689
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    |||||| ||| |||||||||||| ||| || ||||||||||||||| |||||| || ||| || |||||||||||    
T  39706615 tcctcgtgagattaactcaattggtataaacaatacataatatatgcaaggtttggggtttgagtctcggccacc 39706689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 147
Target Start/End: Original strand, 44639647 - 44639689
Alignment:
Q  105 ttaactcaattgatatgaataatacataatatatgtaaggttc 147  Q
    |||||||||||| |||||| |||||||||||||||||||||||    
T  44639647 ttaactcaattggtatgaacaatacataatatatgtaaggttc 44639689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 41132446 - 41132499
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    ||||||| |||||||||| |||| ||||||||| ||||| ||||||||||||||    
T  41132446 gagcttagctcaattgatttgaacaatacataaaatatgcaaggttcggagttc 41132499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 16198408 - 16198452
Alignment:
Q  124 taatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    |||| ||||||||||| ||||| ||||||||||||||||||||||    
T  16198408 taatgcataatatatgcaaggtccggagttcgaatctcggccacc 16198452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 27263346 - 27263418
Alignment:
Q  104 cttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccaccgtaaaaaa 176  Q
    ||||||||| ||| |||| | ||| ||||||||||| ||||||||||||||||| | | |||||| |||||||    
T  27263346 cttaactcagttggtatggacaatgcataatatatgcaaggttcggagttcgaaccccagccaccataaaaaa 27263418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 35751429 - 35751389
Alignment:
Q  102 agcttaactcaattgatatgaataatacataatatatgtaa 142  Q
    |||||| ||||||||||||||||||| ||||||||||||||    
T  35751429 agcttagctcaattgatatgaataatgcataatatatgtaa 35751389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 21580819 - 21580862
Alignment:
Q  102 agcttaactcaattgatatgaataatacataatatatgtaaggt 145  Q
    |||||||||||||||||||| | ||| |||||||||||||||||    
T  21580819 agcttaactcaattgatatggacaatgcataatatatgtaaggt 21580862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 48527192 - 48527259
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    ||||||| |||| |||||| | | ||| ||||||||||| ||||| ||||||||||||| ||||||||    
T  48527192 gagcttatctcagttgataaggacaatgcataatatatgcaaggtccggagttcgaatcccggccacc 48527259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 4905271 - 4905353
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccaccgtaaaaaa 176  Q
    |||||| |||||||||||| ||| | || | ||| ||||| ||||| |||||||||||||| || | |||||||| |||||||    
T  4905271 tcctcgtgagcttaactcagttgttgtggacaatgcataaaatatgcaaggttcggagttcaaaccccggccaccataaaaaa 4905353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 174
Target Start/End: Original strand, 2622319 - 2622400
Alignment:
Q  93 atcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccaccgtaaaa 174  Q
    ||||||| ||||||| || | |||||| ||| ||||||||||||||||||| ||  |||||| || | |||||||| |||||    
T  2622319 atcctcgtgagcttagcttagttgataggaacaatacataatatatgtaagatttagagttcaaaccccggccaccataaaa 2622400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 2962763 - 2962710
Alignment:
Q  123 ataatacataatatatgtaaggttcggagttcgaatctcggccaccgtaaaaaa 176  Q
    ||||| ||||||||||| ||||||||| ||| ||||| |||||||| |||||||    
T  2962763 ataatgcataatatatgcaaggttcggggtttgaatcccggccaccataaaaaa 2962710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 23205408 - 23205367
Alignment:
Q  114 ttgatatgaataatacataatatatgtaaggttcggagttcg 155  Q
    |||||||||||||||||||||| ||| ||||||||| |||||    
T  23205408 ttgatatgaataatacataataaatgcaaggttcggggttcg 23205367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 12167402 - 12167446
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatat 138  Q
    ||||||||| ||||| |||||||||||||| ||| ||||||||||    
T  12167402 tcctcgcgaacttaattcaattgatatgaacaatgcataatatat 12167446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 15015243 - 15015287
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggt 145  Q
    |||||||||||| |||||| ||| ||| |||||||||||||||||    
T  15015243 gagcttaactcagttgataagaacaatgcataatatatgtaaggt 15015287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 109 - 149
Target Start/End: Complemental strand, 24099286 - 24099246
Alignment:
Q  109 ctcaattgatatgaataatacataatatatgtaaggttcgg 149  Q
    |||||||||||| || ||| |||||||||||||||||||||    
T  24099286 ctcaattgatataaacaatgcataatatatgtaaggttcgg 24099246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 29726795 - 29726855
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    |||||| |||||||||||| |||| ||||| |||  |||||||||| ||||||||| ||||    
T  29726795 tcctcgtgagcttaactcagttgacatgaacaatgtataatatatgcaaggttcggggttc 29726855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 48837872 - 48837936
Alignment:
Q  104 cttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    ||||||||||||| |||| ||||| ||||||||||| || ||| || ||||||| | ||||||||    
T  48837872 cttaactcaattggtatggataatgcataatatatgcaaagtttggggttcgaaccccggccacc 48837936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000004; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 9311996 - 9311947
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaag 143  Q
    |||||| |||||||||||| ||| ||||||||||||||||||||||||||    
T  9311996 tcctcgtgagcttaactcagttggtatgaataatacataatatatgtaag 9311947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 13496111 - 13496171
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    |||||| |||||||||||| |||||||||| ||| ||||||||||| ||||| ||||||||    
T  13496111 tcctcgtgagcttaactcagttgatatgaacaatgcataatatatgcaaggtccggagttc 13496171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 9665305 - 9665368
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaa 157  Q
    |||||| ||| |||||||||||| |||||| |||| |||||||||||||||| ||| |||||||    
T  9665305 tcctcgtgagtttaactcaattggtatgaacaatatataatatatgtaaggtccggggttcgaa 9665368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 93 - 168
Target Start/End: Original strand, 28951393 - 28951468
Alignment:
Q  93 atcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    ||||||| |||||||||||| ||| |||||| ||| ||||||||||| ||||||| |||||  || ||||||||||    
T  28951393 atcctcgtgagcttaactcagttggtatgaacaatgcataatatatgcaaggttcagagtttaaacctcggccacc 28951468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 168
Target Start/End: Complemental strand, 8916540 - 8916466
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    |||||| ||||| |||||| ||| || | | ||||||||||||||| ||||| |||||||| |||||||||||||    
T  8916540 tcctcgtgagctaaactcagttggtagggacaatacataatatatgcaaggtccggagttcaaatctcggccacc 8916466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 12904376 - 12904323
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    ||||||| |||| |||||||||| ||| ||||||||||| ||||||||||||||    
T  12904376 gagcttacctcagttgatatgaacaatgcataatatatgcaaggttcggagttc 12904323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 2213289 - 2213365
Alignment:
Q  91 aaatcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccac 167  Q
    ||||||||| || ||||||||||||| || ||| ||| ||||||||||| ||||| || |||| ||||| |||||||    
T  2213289 aaatcctcgtgaacttaactcaattggtaagaacaatgcataatatatgcaaggtccgaagttagaatcccggccac 2213365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 8629755 - 8629688
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    |||||||||||||||| |||| | ||| ||||||||||| ||||||||| |||| || |||| |||||    
T  8629755 gagcttaactcaattggtatggacaatgcataatatatgcaaggttcggggttcaaacctcgaccacc 8629688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 10902335 - 10902398
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaa 157  Q
    |||||||||||||| ||||  ||||||| | ||| |||||||||||||| ||| ||||||||||    
T  10902335 tcctcgcgagcttagctcagatgatatggacaatgcataatatatgtaaagtttggagttcgaa 10902398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 11148207 - 11148270
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaa 157  Q
    |||||| |||||||||||| || |  || |||||||||||||||| |||||||||| |||||||    
T  11148207 tcctcgtgagcttaactcagttaacttggataatacataatatatttaaggttcggggttcgaa 11148270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 12336392 - 12336319
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccac 167  Q
    |||||| ||| |||||||| || ||||| | ||| |||||||||| |||||| ||| |||||||||||| ||||    
T  12336392 tcctcgtgagtttaactcagttaatatggacaatgcataatatatataaggtacggggttcgaatctcgaccac 12336319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 23635773 - 23635720
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    ||||||| |||| |||||||  | ||| ||||||||||||||||||||||||||    
T  23635773 gagcttatctcagttgatatatacaatgcataatatatgtaaggttcggagttc 23635720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 154
Target Start/End: Complemental strand, 24438349 - 24438288
Alignment:
Q  93 atcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    ||||||| || ||||||||| ||| || ||||||| |||||||||||||| |||||| ||||    
T  24438349 atcctcgtgaacttaactcagttggtaagaataatgcataatatatgtaaagttcggggttc 24438288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 109 - 157
Target Start/End: Original strand, 6283946 - 6283994
Alignment:
Q  109 ctcaattgatatgaataatacataatatatgtaaggttcggagttcgaa 157  Q
    ||||||||||| ||| ||| |||||||||||||| | ||||||||||||    
T  6283946 ctcaattgataagaacaatgcataatatatgtaaagctcggagttcgaa 6283994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 9977059 - 9977103
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggt 145  Q
    |||||||||||||||| |||| ||||| ||||||||||| |||||    
T  9977059 gagcttaactcaattggtatggataatgcataatatatgcaaggt 9977103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 12459783 - 12459747
Alignment:
Q  118 tatgaataatacataatatatgtaaggttcggagttc 154  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  12459783 tatgaataatgcataatatatgtaaggttcggggttc 12459747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000006; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 21331483 - 21331412
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggcc 165  Q
    |||||| ||||||| |||| ||| |||| | ||| ||||||||||| ||||||||| |||||||||||||||    
T  21331483 tcctcgtgagcttagctcagttgttatggacaatgcataatatatgcaaggttcggggttcgaatctcggcc 21331412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 154
Target Start/End: Original strand, 17755122 - 17755176
Alignment:
Q  100 cgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    |||||||| |||| |||||| ||| ||||||||||||||||||||||||| ||||    
T  17755122 cgagcttagctcagttgataggaacaatacataatatatgtaaggttcggggttc 17755176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 154
Target Start/End: Original strand, 19056442 - 19056496
Alignment:
Q  100 cgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttc 154  Q
    |||||||| |||| |||||| ||| ||||||||||||||||||||||||| ||||    
T  19056442 cgagcttagctcagttgataggaacaatacataatatatgtaaggttcggggttc 19056496  T

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Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 10843845 - 10843796
Alignment:
Q  96 ctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggt 145  Q
    |||| |||||||||||| ||| |||||||||||||||||||||| |||||    
T  10843845 ctcgtgagcttaactcagttggtatgaataatacataatatatgcaaggt 10843796  T

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Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 53633683 - 53633619
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaat 158  Q
    |||||| |||||||||||| ||| || | ||||| ||||||||||||||||| ||| ||||||||    
T  53633683 tcctcgtgagcttaactcagttggtaaggataatgcataatatatgtaaggtccggggttcgaat 53633619  T

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Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 7827503 - 7827566
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaa 157  Q
    |||||| ||| |||||||| |||||||| | ||| |||||||||||||||||  ||||||||||    
T  7827503 tcctcgtgagtttaactcagttgatatggacaatgcataatatatgtaaggtctggagttcgaa 7827566  T

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Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 159
Target Start/End: Complemental strand, 46337294 - 46337231
Alignment:
Q  96 ctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatc 159  Q
    |||| |||||||||||||| | |||||| ||||||||| ||||||||||| || |||| |||||    
T  46337294 ctcgtgagcttaactcaatcggtatgaacaatacataaaatatgtaaggtccgcagtttgaatc 46337231  T

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Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 47099094 - 47099036
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatc 159  Q
    ||||||| |||| |||||| ||||||| ||||||||||| ||||||||| |||| ||||    
T  47099094 gagcttagctcagttgataagaataatgcataatatatgcaaggttcggggttcaaatc 47099036  T

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Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 48376830 - 48376912
Alignment:
Q  94 tcctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccaccgtaaaaaa 176  Q
    |||||| ||||||| |||| ||| ||   ||||| |||||||||||||||||| || ||||||||| ||||| || |||||||    
T  48376830 tcctcgtgagcttagctcagttggtaaagataatgcataatatatgtaaggtttggggttcgaatcccggccgccataaaaaa 48376912  T

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Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 21160057 - 21160098
Alignment:
Q  104 cttaactcaattgatatgaataatacataatatatgtaaggt 145  Q
    ||||||||| |||||||| ||||| |||||||||||||||||    
T  21160057 cttaactcagttgatatggataatgcataatatatgtaaggt 21160098  T

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Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 43630473 - 43630432
Alignment:
Q  105 ttaactcaattgatatgaataatacataatatatgtaaggtt 146  Q
    |||||||||||| |||||| ||| ||||||||||||||||||    
T  43630473 ttaactcaattggtatgaacaatgcataatatatgtaaggtt 43630432  T

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Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 162
Target Start/End: Original strand, 45254261 - 45254294
Alignment:
Q  129 cataatatatgtaaggttcggagttcgaatctcg 162  Q
    |||||||||||||||||| |||||||||||||||    
T  45254261 cataatatatgtaaggtttggagttcgaatctcg 45254294  T

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Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 1744046 - 1743982
Alignment:
Q  104 cttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    ||||| ||| ||| |||| | ||||||||||||||| ||||||||| |||||||  |||||||||    
T  1744046 cttaattcagttggtatggacaatacataatatatgcaaggttcggggttcgaacttcggccacc 1743982  T

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Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 5941353 - 5941297
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaa 157  Q
    |||||||||||| ||| |||||| ||| ||||||||||| | |||||||| ||||||    
T  5941353 gagcttaactcagttggtatgaacaatgcataatatatgcatggttcggaattcgaa 5941297  T

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Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 42784959 - 42785003
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggt 145  Q
    |||||||||||| |||||||| | |||||||||||| ||||||||    
T  42784959 gagcttaactcagttgatatggacaatacataatatgtgtaaggt 42785003  T

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Target: scaffold0070 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 42990 - 42933
Alignment:
Q  102 agcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatc 159  Q
    ||||||||||| |||||| ||||||| ||||||||||| |||||||||  ||||||||    
T  42990 agcttaactcagttgataagaataatgcataatatatgcaaggttcgggattcgaatc 42933  T

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Target: scaffold0445 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 4472 - 4539
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    |||||||||| | |||||| ||||||| |||||||||||||||||   ||||||||||| ||| ||||    
T  4472 gagcttaactaagttgataggaataatgcataatatatgtaaggtctagagttcgaatcccggacacc 4539  T

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Target: scaffold0312 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 121 - 153
Target Start/End: Complemental strand, 8003 - 7971
Alignment:
Q  121 gaataatacataatatatgtaaggttcggagtt 153  Q
    ||||||| |||||||||||||||||||||||||    
T  8003 gaataatgcataatatatgtaaggttcggagtt 7971  T

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Target: scaffold0062 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 7471 - 7542
Alignment:
Q  96 ctcgcgagcttaactcaattgatatgaataatacataatatatgtaaggttcggagttcgaatctcggccacc 168  Q
    |||| |||||||||||||||| |||||| ||| ||||| |||||||| | || | ||||||||| ||||||||    
T  7471 ctcgtgagcttaactcaattggtatgaacaatgcataaaatatgtaa-gatctgggttcgaatcccggccacc 7542  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 122893 - 122937
Alignment:
Q  101 gagcttaactcaattgatatgaataatacataatatatgtaaggt 145  Q
    |||||||||||||||| |||||| ||| ||||||||||| |||||    
T  122893 gagcttaactcaattggtatgaacaatgcataatatatgcaaggt 122937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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