View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15164_high_3 (Length: 239)
Name: NF15164_high_3
Description: NF15164
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15164_high_3 |
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Alignment Details
Target: chr4 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 17 - 227
Target Start/End: Complemental strand, 51903010 - 51902799
Alignment:
| Q |
17 |
ataacatttcatttttgaatgcatagaaaaacatcataactgttttctacaattttttcatattcttgaaacattgaattatgttattctcatt-ttttc |
115 |
Q |
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| T |
51903010 |
ataacatttcatttttgaatgcatagaaaaacatcataactgttttctacaattttttcatattcttgaaacattgaattatgttattctcatttttttc |
51902911 |
T |
|
| Q |
116 |
aatatcaatagatacatatgctgttgatgtcgaaaaaatgtgtcagcaaaacatcatacaagtaattaaataatcatttaatcattcatctcttattcaa |
215 |
Q |
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| T |
51902910 |
aacatcaatagatacatacgctgttgatgtcgaaaaaatgtgtcaacaaaacatcatataattaaccaaacaattatttaatcattcatctcttattcaa |
51902811 |
T |
|
| Q |
216 |
tttttcatctca |
227 |
Q |
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|||||||||||| |
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| T |
51902810 |
tttttcatctca |
51902799 |
T |
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