View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15167_high_17 (Length: 347)
Name: NF15167_high_17
Description: NF15167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15167_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 311; Significance: 1e-175; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 9 - 331
Target Start/End: Complemental strand, 36717052 - 36716730
Alignment:
| Q |
9 |
agcagcagagaatgaagatggatcagagaaaatggtcagctggttagcatgaactggtgttccagtttgctcaatttcctcagttccctgtctctccctc |
108 |
Q |
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| T |
36717052 |
agcagcagagaatgaagatggatcagagaaaatggtcagctggttagcatgaactggtgttccagtttgctcaatttcctcagttccctgtctctccctc |
36716953 |
T |
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| Q |
109 |
cttctctcaatcgcctaaacacaatattaacaacactaatttagttcatattcaaattaataagatggaactaaacatacagaaaattcatcagaacatt |
208 |
Q |
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| T |
36716952 |
cttctctcaatcgcctaaacacaatattaacaacactaatttagttcatattcaaattaataagatggaactaaacatacagaaaattcatcagaacttt |
36716853 |
T |
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| Q |
209 |
gacaacgatgacttaatttatataccattcaaattaaactcaacaaacagagaattatcatcacataacaagttaacaaaataagcagttatgccggttc |
308 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
36716852 |
gacaacgatgacttaatttatatacaattcaaattaaactcaacaaacagagaattatcatcacataacaagttaacaaaataagcagttatgcccgttc |
36716753 |
T |
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| Q |
309 |
aattcaaatcaaattctagttaa |
331 |
Q |
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| T |
36716752 |
aattcaaatcaaattctagttaa |
36716730 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 1482264 - 1482090
Alignment:
| Q |
9 |
agcagcagagaatgaagatggatcagagaaaatggtcagctggttagcatgaactggtgttccagtttgctcaatttcctcagttccctgtctctccctc |
108 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |
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| T |
1482264 |
agcagcagagaatgaagatggatcagagaaaatggtcagctggttagcatgaactggtgttccagtttgctcaatctcctcagttcccagtctctccctc |
1482165 |
T |
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| Q |
109 |
cttctctcaatcgcctaaacacaatattaacaacactaatttagttcatattcaaattaataagatggaactaaa |
183 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||| |||| |||| |||||||| |
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| T |
1482164 |
cttctctcaatcgcctaaacacaatattaacaacactaaattaattcaaattcaaactaatcagatagaactaaa |
1482090 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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