View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15167_high_31 (Length: 265)
Name: NF15167_high_31
Description: NF15167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15167_high_31 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 11 - 265
Target Start/End: Complemental strand, 34426996 - 34426742
Alignment:
| Q |
11 |
cagagaggtataaactatgaaatattatctcatatcttgattaactttgtactcctgatgtcaaacatcctgtgccctttatgtgattgacaatgcaaat |
110 |
Q |
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| T |
34426996 |
cagagaggtataaactatgaattattatctcatatcttgattaactttgtactactgatgtcaaacatcctgtgccctttatgtgattgacaatgcaaat |
34426897 |
T |
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| Q |
111 |
gaacagcatgaaatttgatgttgcctcaaccttaaatattgtagctttttagataatcctttcttgacttgaccaatggtctcagactcgattattagtt |
210 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34426896 |
gaacagcatgaaatttgatgttgcctcaaccttaaatattgtagcttgttagataatcctttcttgacttgaccaatggtctcagactcgattattagtt |
34426797 |
T |
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| Q |
211 |
tagatattttcagattcttaatagcatagatttgagtcttttgccactctcatac |
265 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34426796 |
tagatattttcagattcttaatagcatagatttgagtcttttgccactctcatac |
34426742 |
T |
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