View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15167_high_4 (Length: 563)
Name: NF15167_high_4
Description: NF15167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15167_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 507; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 507; E-Value: 0
Query Start/End: Original strand, 16 - 554
Target Start/End: Original strand, 48452244 - 48452782
Alignment:
| Q |
16 |
catcatgatcactccatatttgactaacattgtacaatatataagatgtcaataattccaatagaataaaaggtacctactgattcttcatgaatgatga |
115 |
Q |
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| T |
48452244 |
catcatgatcactccatatttgactaacattgtacaatatataagatgtcaataattccaatagaataaaaggtacctactgattcttcatgaatgatga |
48452343 |
T |
|
| Q |
116 |
acataaaattctacaataacaagcactgtctgctattcgaaactaatttactatgcgtggtaacagaaaaacaagaaccagatcagactagagtgcgatt |
215 |
Q |
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| T |
48452344 |
acataaaattctacaataacaagcactgtctgctatttaaaactaatttactatgcgtggtaatagaaaaacaagaaccagatcagactagagtgcgact |
48452443 |
T |
|
| Q |
216 |
aaattaaatacaactagaacaaaattaagaatcactcttctctttgaatgaggtgtaccttagaactcaactcagcgaattcagatcacctaaagcgcga |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48452444 |
aaattaaatacaactagaacaaaattaagaatcactcttctctttgaatgaggtgtaccttagaactcaactcagcgaattcagatcacctaaagcgcga |
48452543 |
T |
|
| Q |
316 |
attgacatggtaagggggcgagaacctcatacattcttctcaaagttgaaatttttggattaaggttcttgtttcacaaaattatcggggagtagtcaaa |
415 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |
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| T |
48452544 |
attgacatggtaagggggcgagaacctcatacattcttctcaaagttgaaatttttggattaaggttcttgtttcataaaattattggggagtagtcaaa |
48452643 |
T |
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| Q |
416 |
gtgcatactattgcaatgattacaagtaatagcattttgagctacatcaatattaatattgttctctcattaatatgaaacatggaaaaccattatacgt |
515 |
Q |
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| T |
48452644 |
gtgcatactattgcaatgattacaagtaatagcattttgagctacatcaatattaatattgttctctcattaatatgaaacatggaaaaccattatacat |
48452743 |
T |
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| Q |
516 |
tcttatatgagcacgaggttttctcgtccaacttcatct |
554 |
Q |
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| T |
48452744 |
tcttatatgagcacgagtttttctcgtccaacttcatct |
48452782 |
T |
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