View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15167_high_41 (Length: 203)
Name: NF15167_high_41
Description: NF15167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15167_high_41 |
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Alignment Details
Target: chr4 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 53230292 - 53230107
Alignment:
| Q |
1 |
ttacacgttttctacttcaatcacaaacaattgtagtataatattgtatccttctcacttaagcaaaacgttaaaagataacacatctcgaacttcgttt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
53230292 |
ttacacgttttctacttcaatcacaaacaattgtagtcaaatattgtatccttctcacttaagcaaaacgttaaaagataacacatatcgaacttcgttt |
53230193 |
T |
|
| Q |
101 |
tgatggcgtaatagcagtgcactaaaaagttagtgtgaaaatacaagcaagaaaaaacctttgtattttaggaccatttagagtat |
186 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
53230192 |
tgatggcgtaatagcagtgcactaaaaagttagtgtgaaaatacaagcaagaaaaaaccttcgtattttaggaccatttagagtat |
53230107 |
T |
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