View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15167_low_39 (Length: 238)
Name: NF15167_low_39
Description: NF15167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15167_low_39 |
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Alignment Details
Target: chr8 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 34426620 - 34426398
Alignment:
| Q |
1 |
gaactgagactgtctttttggnnnnnnnnngttgctttgaatttgaggtactattttgtttcattgttatgcagtcttctataaacagtgaggtggatga |
100 |
Q |
| |
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||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34426620 |
gaactgagactgtctttttggtttttttttgttgctttgaatttgaggtcctattttgtttcattgttatgcagtcttctataaacagtgaggtggatga |
34426521 |
T |
|
| Q |
101 |
aattttgtctgtttattgtttgtgggatatatttgattcttttagtgtctgccaatccatgtcttattttaatgaatgcgctcacttgttatggagttgc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34426520 |
aattttgtctgtttattgtttgtgggatatatttgattcttttagtgtctgccaatccatgtcttattttaatgaatgcgctcacttgttatggagttgc |
34426421 |
T |
|
| Q |
201 |
ttaactcactttctgtcgtttat |
223 |
Q |
| |
|
||||||||||||||||||||||| |
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|
| T |
34426420 |
ttaactcactttctgtcgtttat |
34426398 |
T |
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