View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15169_low_13 (Length: 256)
Name: NF15169_low_13
Description: NF15169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15169_low_13 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 14 - 256
Target Start/End: Original strand, 32904420 - 32904662
Alignment:
| Q |
14 |
aatatcagcaagtaacctttttcaaactactcatcaatccattcaaacccttacccctggttggccccctccctattgtgtcctattgtctaaagattgc |
113 |
Q |
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| T |
32904420 |
aatatcagcaagtaacctttttcaaactactcatcaatccattcaaacccttacccctggttggccccctccctattgtgtcctattgtctaaagattgc |
32904519 |
T |
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| Q |
114 |
aacagttacattattgtaagtgtagtgatgcagatgatgccatccaatagcatgaaaatggaaagttggataaaaagacactttgaaaaattggtgcttg |
213 |
Q |
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| T |
32904520 |
aacagttacattattgtaagtgtagtgatgcagatgatgccatccaacagcatgaaaatggaaagttggataaaaaaacactttgaaaaattggtgcttg |
32904619 |
T |
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| Q |
214 |
gcattggtatggctaaacgatattcaatgatgataacattgat |
256 |
Q |
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| T |
32904620 |
gcattggtatggctaaacgatattcaatgatgataacattgat |
32904662 |
T |
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