View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1516_low_39 (Length: 270)
Name: NF1516_low_39
Description: NF1516
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1516_low_39 |
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Alignment Details
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 14 - 231
Target Start/End: Original strand, 36895863 - 36896080
Alignment:
| Q |
14 |
attattctacagtttgacgtgcctaatttcttagtccatactttaattcaatttcatttctatacctttttcatttccttattagctcaagaacttcctt |
113 |
Q |
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| T |
36895863 |
attattctacagtttgacgtgcctaatttcttagttcatactttaattcaatttcatatctatacctttttcatttccctattagctcaagaacttcctt |
36895962 |
T |
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| Q |
114 |
tacaagtgccacatgataccaggaacactcaagaggaccaaaaggaacaaaaatctcactcacatacatatcattttcataaagggcgtcatctctgatc |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
36895963 |
tacaagtgccacatgataccaggaacactcaagaggaccaaaaggaacaaaaatctcactcacacacatatcattttcataaagggcgtcatctctgatc |
36896062 |
T |
|
| Q |
214 |
accatcctaaactagaac |
231 |
Q |
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|||||||||||||||||| |
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| T |
36896063 |
accatcctaaactagaac |
36896080 |
T |
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