View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15173_low_12 (Length: 242)
Name: NF15173_low_12
Description: NF15173
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15173_low_12 |
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Alignment Details
Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 48060990 - 48060765
Alignment:
| Q |
1 |
aacaattaggaagtgaactaaaaccaaaacccaccacaaccctatcagaatcagttcgaagctcaaacaaatttcctaaattatcattaaccgctttaca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48060990 |
aacaattaggaagtgaactaaaaccaaaacccaccacaaccctatcagaatcagttcgaagctcaaacaaatttcctaaattatcattaaccgctttaca |
48060891 |
T |
|
| Q |
101 |
aacagtgaaaaaagcacggcaagcatcggagggagaaattccgaatctccgggcaacggaattgtaactagcgccgtgagctaaacggaaaattgcagct |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48060890 |
aacagtgaaaaaagcacggcaagcatcggagggagaaataccgaatctccgggcaacggaattgtaactagcgccgtgagctaaacggaaaattgcagct |
48060791 |
T |
|
| Q |
201 |
gctagggcacaatcaggggtaatttg |
226 |
Q |
| |
|
|||||||||||||||||||||||||| |
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| T |
48060790 |
gctagggcacaatcaggggtaatttg |
48060765 |
T |
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