View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15173_low_6 (Length: 308)
Name: NF15173_low_6
Description: NF15173
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15173_low_6 |
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Alignment Details
Target: chr4 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 41135698 - 41135986
Alignment:
| Q |
1 |
gggagagaagaaagaggaacaacagtgtgtgtaaaggcggtgtatggccgatgattacatagcgacggtagattagagcatttgctaccatgtagaacac |
100 |
Q |
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| T |
41135698 |
gggagagaagaaagaggaacaacagtgtgtgtaaaggcggtgtatggccgatgattacatagcgacggtagattagagcatttgctaccatgtagaacac |
41135797 |
T |
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| Q |
101 |
cattagtgtgccaatgctgatcaattcaattataatgtctagttctgtgaaaagcgcaatcgatgctgtgcaaaatcctgcgtcaataaaagagtcatta |
200 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |
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| T |
41135798 |
cattagcgtgccaatgctgatcaattcaattataatgtctagttctgtgaaaagcgcaatcgatgcagtgcaaaatcctgcgtcaataaaagagtcaata |
41135897 |
T |
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| Q |
201 |
gtcattttacaactgtatctgaatataattgaactatattttataaaatcaaacttttatcattgcgctaaaacctcgaagacaatatt |
289 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
41135898 |
gtcattttacaactatatctgaatataattgaactatattttataaaatcaaacttttatgattgcgctaaaacctcgaagacaatatt |
41135986 |
T |
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