View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15175_low_27 (Length: 288)
Name: NF15175_low_27
Description: NF15175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15175_low_27 |
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Alignment Details
Target: chr4 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 13 - 272
Target Start/End: Original strand, 24165134 - 24165393
Alignment:
| Q |
13 |
tcatcagcctaaaaatctcagacaccatttcccggtcacatttctgtgcaaacccagatatcaaagcattccaagtcaccacatttgggttcacacccat |
112 |
Q |
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| T |
24165134 |
tcatcagcctaaaaatctcagacaccatttcccggtcacatttctgcgcaaacccagatatcaaagcattccaagtcaccacatttgggttcacacccat |
24165233 |
T |
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| Q |
113 |
caacttcatattttcaaccaaactcaatgcctcattcggaagcccttgttgagcatatccagaaacaacagcattcattgctaccaaatccttcacaacc |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24165234 |
caacttcatattttcaaccaaactcaatgcctcattcggaagcccttgttgagcatatccagaaacaacagcattcattgctaccaaatccttcacaacc |
24165333 |
T |
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| Q |
213 |
attccattaaacaccttacgtgcatccctaacttcaccacacttagaatacataacaatc |
272 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24165334 |
attccatcaaacaccttacgtgcatccctaacttcaccacacttagaatacataacaatc |
24165393 |
T |
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