View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15175_low_28 (Length: 279)

Name: NF15175_low_28
Description: NF15175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15175_low_28
NF15175_low_28
[»] chr1 (4 HSPs)
chr1 (19-279)||(29452896-29453156)
chr1 (82-279)||(29423555-29423752)
chr1 (78-279)||(29467432-29467632)
chr1 (79-279)||(29442970-29443173)
[»] chr2 (13 HSPs)
chr2 (78-236)||(9292261-9292416)
chr2 (124-279)||(12012234-12012389)
chr2 (78-279)||(10336128-10336332)
chr2 (90-279)||(9321263-9321452)
chr2 (79-275)||(9283833-9284029)
chr2 (78-136)||(9357613-9357671)
chr2 (77-236)||(9274845-9275001)
chr2 (78-236)||(9060777-9060935)
chr2 (110-219)||(11987155-11987264)
chr2 (79-136)||(8573142-8573199)
chr2 (169-237)||(8579220-8579288)
chr2 (79-136)||(7115282-7115339)
chr2 (166-279)||(7612249-7612362)
[»] chr3 (1 HSPs)
chr3 (78-209)||(37462855-37462986)
[»] chr8 (1 HSPs)
chr8 (78-279)||(41966365-41966566)
[»] chr4 (1 HSPs)
chr4 (78-275)||(26575164-26575361)
[»] scaffold0667 (1 HSPs)
scaffold0667 (78-136)||(4913-4971)
[»] chr7 (1 HSPs)
chr7 (174-246)||(45238296-45238368)


Alignment Details
Target: chr1 (Bit Score: 253; Significance: 1e-141; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 19 - 279
Target Start/End: Original strand, 29452896 - 29453156
Alignment:
Q  19 ctaatctccctctttctattcctcctcctcgttctggcaacgtccactttctctcatgtgttcacggctttggttttgatccgttaaacgtcgattacaa 118  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29452896 ctaatctccctatttctattcctcctcctcgttctggcaacgtccactttctctcatgtgttcacggctttggttttgatccgttaaacgtcgattacaa 29452995  T
Q  119 actcctcagaatctcttgtatcgttgatccacaatactctacttctgattcacatgtgaaactcttcagctcgaaaatgaactcgtggaaagaccttcct 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29452996 actcctcagaatctcttgtatcgttgatccacaatactctacttctgattcacatgtgagactcttcagctcgaaaatgaactcgtggaaagaccttcct 29453095  T
Q  219 agtatgccgtacgctctttcctatcctcgaacagagggggtttttgttgagaattctcttc 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29453096 agtatgccgtacgctctttcctatcctcgaacagagggggtttttgttgagaattctcttc 29453156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 82 - 279
Target Start/End: Complemental strand, 29423752 - 29423555
Alignment:
Q  82 acggctttggttttgatccgttaaacgtcgattacaaactcctcagaatctcttgtatcgttgatccacaatactctacttctgattcacatgtgaaact 181  Q
    ||||||| ||||||||||| ||||  |  |||||||||||||||| |||||  ||| |||| ||   |||| | ||||||||||| ||||||| || |||    
T  29423752 acggcttcggttttgatccattaactgatgattacaaactcctcacaatcttctgtttcgtcgagatacaacaatctacttctgaatcacatgcgagact 29423653  T
Q  182 cttcagctcgaaaatgaactcgtggaaagaccttcctagtatgccgtacgctctttcctatcctcgaacagagggggtttttgttgagaattctcttc 279  Q
    ||||||||||||||  |||||||||||||| |||||||  ||||| ||| |||||| |||| ||| ||||  ||||||||||||||||||||||||||    
T  29423652 cttcagctcgaaaacaaactcgtggaaagaacttcctaccatgccttacactctttactatgctcaaacaatgggggtttttgttgagaattctcttc 29423555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 78 - 279
Target Start/End: Original strand, 29467432 - 29467632
Alignment:
Q  78 gttcacggctttggttttgatccgttaaacgtcgattacaaactcctcagaatctcttgtatcgttgatccacaatactctacttctgattcacatgtga 177  Q
    ||||||||||| ||||||||||| |||| ||  |||||||||||| |||||||||||||| ||||  | | |||  ||   |||  |||||||||||| |    
T  29467432 gttcacggcttcggttttgatccattaaccgatgattacaaactc-tcagaatctcttgtttcgtcaaactacaccaccacactcatgattcacatgtta 29467530  T
Q  178 aactcttcagctcgaaaatgaactcgtggaaagaccttcctagtatgccgtacgctctttcctatcctcgaacagagggggtttttgttgagaattctct 277  Q
     ||||||||||||||||| |||||| |||||||  ||| |||||||||||||| |||||| |||||||| |||   || |||||||||||||||||||||    
T  29467531 cactcttcagctcgaaaacgaactcctggaaagtactttctagtatgccgtactctctttactatcctcaaaccatggtggtttttgttgagaattctct 29467630  T
Q  278 tc 279  Q
    ||    
T  29467631 tc 29467632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 79 - 279
Target Start/End: Original strand, 29442970 - 29443173
Alignment:
Q  79 ttcacggctttggttttgatccgttaaacgtcgattacaaactcctcagaatctcttgtatcgttgatccacaatactctacttctgattcacatgtgaa 178  Q
    |||||||||| ||||||||||| || | |  ||||||||||||| |||||||||||||  ||||||    |||| ||||||||| ||| |||||||| |     
T  29442970 ttcacggcttcggttttgatccattgaccaacgattacaaactcatcagaatctcttgcttcgttggggtacaacactctacttttgaatcacatgttag 29443069  T
Q  179 actcttcagctcgaaaatgaactcgtggaaagaccttcctagtatgccgtacgctctttcctatcctc---gaacagagggggtttttgttgagaattct 275  Q
    |||||||||||  ||||  |||||||||||||| ||||||| |||||| ||| ||||||||||| |||   |||||  ||||| |||||||||||||||     
T  29443070 actcttcagcttcaaaacaaactcgtggaaagaacttcctactatgccttacactctttcctatgctcgaagaacaatgggggattttgttgagaattcc 29443169  T
Q  276 cttc 279  Q
    ||||    
T  29443170 cttc 29443173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 7e-24; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 78 - 236
Target Start/End: Complemental strand, 9292416 - 9292261
Alignment:
Q  78 gttcacggctttggttttgatccgttaaacgtcgattacaaactcctcagaatctcttgtatcgttgatccacaatactctacttctgattcacatgtga 177  Q
    ||||||||||| |||| |||||| |||| || ||||||||||||||||||||||||||| || |  || | ||| ||||   ||| |||| |||| ||||    
T  9292416 gttcacggcttcggttatgatccattaaccggcgattacaaactcctcagaatctcttggatagccgacctacattact---cttttgatccacaggtga 9292320  T
Q  178 aactcttcagctcgaaaatgaactcgtggaaagaccttcctagtatgccgtacgctctt 236  Q
     |||||||||||| ||||  ||||||||||||  | |||||||||||||||||||||||    
T  9292319 gactcttcagctccaaaactaactcgtggaaaatcattcctagtatgccgtacgctctt 9292261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 279
Target Start/End: Original strand, 12012234 - 12012389
Alignment:
Q  124 tcagaatctcttgtatcgttgatccacaatactctacttctgattcacatgtgaaactcttcagctcgaaaatgaactcgtggaaagaccttcctagtat 223  Q
    |||||||||||||  ||||||||  |||| ||||||||| ||||||| |||| | |||||||| ||||||||  |||||||||||||  |||||||||||    
T  12012234 tcagaatctcttggttcgttgatttacaaaactctacttttgattcatatgtcagactcttcacctcgaaaacaaactcgtggaaagtacttcctagtat 12012333  T
Q  224 gccgtacgctctttcctatcctcgaacagagggggtttttgttgagaattctcttc 279  Q
        || | ||||| |||| ||| |||   ||| ||||||||||||||||||||||    
T  12012334 agactatgttctttgctatgctctaaccatgggagtttttgttgagaattctcttc 12012389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 78 - 279
Target Start/End: Complemental strand, 10336332 - 10336128
Alignment:
Q  78 gttcacggctttggttttgatccgttaaacgtcgattacaaactcctcagaatctcttgtatcgttgatccacaatactctacttctg---attcacatg 174  Q
    |||||||| || ||||||||| | |||  || |||||||||||||||||||||||||||  |||| |||| |||| ||  ||||| ||   ||||||||     
T  10336332 gttcacggattcggttttgattcattatccgccgattacaaactcctcagaatctcttggttcgtcgatctacaacaccatacttttgataattcacatt 10336233  T
Q  175 tgaaactcttcagctcgaaaatgaactcgtggaaagaccttcctagtatgccgtacgctctttcctatcctcgaacagagggggtttttgttgagaattc 274  Q
    ||| |||||||||||||||||  ||||| ||||||   |||||   |||||||||   ||||| |||| ||| |||   ||| |||||||||||||||||    
T  10336232 tgacactcttcagctcgaaaacaaactcttggaaaacacttccggatatgccgtatattctttactatactctaaccatgggtgtttttgttgagaattc 10336133  T
Q  275 tcttc 279  Q
    |||||    
T  10336132 tcttc 10336128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 279
Target Start/End: Complemental strand, 9321452 - 9321263
Alignment:
Q  90 ggttttgatccgttaaacgtcgattacaaactcctcagaatctcttgtatcgttgatccacaatactctacttctgattcacatgtgaaactcttcagct 189  Q
    ||||||||||| |||| || |||||||||||||||||||||||||||  | |    ||||||  |||||  || |||||||||||| | |||||||||||    
T  9321452 ggttttgatcctttaaccggcgattacaaactcctcagaatctcttggttagcctctccacacaactctttttatgattcacatgtcagactcttcagct 9321353  T
Q  190 cgaaaatgaactcgtggaaagaccttcctagtatgccgtacgctctttcctatcctcgaacagagggggtttttgttgagaattctcttc 279  Q
    | | ||  ||||||||||||    |||| |||||||||||| |||||  |||| ||| |     ||||||||||||||||||||||||||    
T  9321352 ctataacaaactcgtggaaaataattcccagtatgccgtactctcttatctatgctcaattcatgggggtttttgttgagaattctcttc 9321263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 275
Target Start/End: Original strand, 9283833 - 9284029
Alignment:
Q  79 ttcacggctttggttttgatccgttaaacgtcgattacaaactcctcagaatctcttgtatcgttgatccacaatactctacttctgattcacatgtgaa 178  Q
    |||||||||| ||||||||||| |||| || |||||||||||||||| ||||||||||  | ||   || |||| |||||  || | |||||||||  |     
T  9283833 ttcacggcttcggttttgatcctttaaccggcgattacaaactcctccgaatctcttggctagtatctctacaaaactctttttatcattcacatgccag 9283932  T
Q  179 actcttcagctcgaaaatgaactcgtggaaagaccttcctagtatgccgtacgctctttcctatcctcgaacagagggggtttttgttgagaattct 275  Q
    |||||||||||| ||||  ||||||||||||    |||||| |||||| ||| || ||| |||| ||| | |   ||||||||||||||||||||||    
T  9283933 actcttcagctccaaaacaaactcgtggaaaataattcctattatgccctacactgtttactatgctcaagccatgggggtttttgttgagaattct 9284029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 136
Target Start/End: Complemental strand, 9357671 - 9357613
Alignment:
Q  78 gttcacggctttggttttgatccgttaaacgtcgattacaaactcctcagaatctcttg 136  Q
    ||||||||||| ||||||||||| |||| || |||||||||||||||||||||||||||    
T  9357671 gttcacggcttcggttttgatcctttaaccggcgattacaaactcctcagaatctcttg 9357613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 77 - 236
Target Start/End: Complemental strand, 9275001 - 9274845
Alignment:
Q  77 tgttcacggctttggttttgatccgttaaacgtcgattacaaactcctcagaatctcttgtatcgttgatccacaatactctacttctgattcacatgtg 176  Q
    ||||||||| |||||||||||||| |||  || |||||| ||||| ||||||||||| ||  | | ||||  ||| ||||||   | ||| |||||||||    
T  9275001 tgttcacggttttggttttgatcctttatccggcgattataaacttctcagaatctcatggttagctgatatacattactct---tttgaatcacatgtg 9274905  T
Q  177 aaactcttcagctcgaaaatgaactcgtggaaagaccttcctagtatgccgtacgctctt 236  Q
    | ||||||||||| |||||  ||||||||||||    |||| ||||||||||||||||||    
T  9274904 agactcttcagcttgaaaacaaactcgtggaaaataattcccagtatgccgtacgctctt 9274845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 236
Target Start/End: Original strand, 9060777 - 9060935
Alignment:
Q  78 gttcacggctttggttttgatccgttaaacgtcgattacaaactcctcagaatctcttgtatcgttgatccacaatactctacttctgattcacatgtga 177  Q
    ||||||||||| ||||||||||| || | || |||||||||||||||||||||| ||||  |  ||| || |||| ||  |  || |||||||||||| |    
T  9060777 gttcacggcttcggttttgatccattcaccgccgattacaaactcctcagaatcacttggttatttgctcgacaaaacattttttatgattcacatgtca 9060876  T
Q  178 aactcttcagctcgaaaatgaactcgtggaaagaccttcctagtatgccgtacgctctt 236  Q
      ||||| |||| |||||  ||||||||||||    |||| ||||||||||||||||||    
T  9060877 gtctctttagcttgaaaacaaactcgtggaaaacaattcccagtatgccgtacgctctt 9060935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 219
Target Start/End: Original strand, 11987155 - 11987264
Alignment:
Q  110 cgattacaaactcctcagaatctcttgtatcgttgatccacaatactctacttctgattcacatgtgaaactcttcagctcgaaaatgaactcgtggaaa 209  Q
    ||||||||||||| |||||||||||||  | ||||||| |||  ||  ||||| ||||||| |||| | |||||||| |||||| | |||||||||||||    
T  11987155 cgattacaaactcatcagaatctcttggtttgttgatctacacaaccgtacttttgattcatatgtcagactcttcacctcgaagacgaactcgtggaaa 11987254  T
Q  210 gaccttccta 219  Q
    |  |||||||    
T  11987255 gtacttccta 11987264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 8573142 - 8573199
Alignment:
Q  79 ttcacggctttggttttgatccgttaaacgtcgattacaaactcctcagaatctcttg 136  Q
    |||||||||| ||||||||||  |||| || |||||||||||||||| ||||||||||    
T  8573142 ttcacggcttcggttttgatctattaaccgccgattacaaactcctccgaatctcttg 8573199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 8579220 - 8579288
Alignment:
Q  169 cacatgtgaaactcttcagctcgaaaatgaactcgtggaaagaccttcctagtatgccgtacgctcttt 237  Q
    |||| |||| |||||||||||| ||||  |||||||||||||  ||||||| ||| |||||||||||||    
T  8579220 cacaggtgagactcttcagctccaaaacaaactcgtggaaagcacttcctaatatcccgtacgctcttt 8579288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 7115282 - 7115339
Alignment:
Q  79 ttcacggctttggttttgatccgttaaacgtcgattacaaactcctcagaatctcttg 136  Q
    |||||||||| ||||||||||| ||||  |  ||||||||||| ||||||||||||||    
T  7115282 ttcacggcttcggttttgatcctttaacagatgattacaaacttctcagaatctcttg 7115339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 279
Target Start/End: Complemental strand, 7612362 - 7612249
Alignment:
Q  166 attcacatgtgaaactcttcagctcgaaaatgaactcgtggaaagaccttcctagtatgccgtacgctctttcctatcctcgaacagagggggtttttgt 265  Q
    ||||||| |||| ||||| || || |||||||||||| |||||||  ||||| | |||||  |||||| |||  | || || |||  ||||||| |||||    
T  7612362 attcacaagtgagactctacaacttgaaaatgaactcatggaaagtacttcccaatatgctttacgctgttttatctcatcaaaccaagggggtctttgt 7612263  T
Q  266 tgagaattctcttc 279  Q
    ||||||||||||||    
T  7612262 tgagaattctcttc 7612249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 209
Target Start/End: Complemental strand, 37462986 - 37462855
Alignment:
Q  78 gttcacggctttggttttgatccgttaaacgtcgattacaaactcctcagaatctcttgtatcgttgatccacaatactctacttctgattcacatgtga 177  Q
    ||||||||||| ||||||||| | |||| || |||||||||||||||||||||||||||  |  | |||| |||| || ||  || |||| |||||||||    
T  37462986 gttcacggcttcggttttgattctttaaccggcgattacaaactcctcagaatctcttggcttctcgatctacaaaaccctttttatgatccacatgtga 37462887  T
Q  178 aactcttcagctcgaaaatgaactcgtggaaa 209  Q
     |||||||||||| ||||  ||||||||||||    
T  37462886 gactcttcagctccaaaacaaactcgtggaaa 37462855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 279
Target Start/End: Original strand, 41966365 - 41966566
Alignment:
Q  78 gttcacggctttggttttgatccgttaaacgtcgattacaaactcctcagaatctcttgtatcgttgatccacaatactctacttctgattcacatgtga 177  Q
    |||||||| || ||||||||||| |||| |  |||| ||||||||||||||||||||||     |||||| ||||  |||||||| |||||||||||| |    
T  41966365 gttcacggattcggttttgatccattaaccagcgatcacaaactcctcagaatctcttggtcttttgatcaacaactctctacttttgattcacatgtca 41966464  T
Q  178 aactcttcagctcgaaaatgaactcgtggaaagaccttcctagtatgccgtacgctctttcctatcctcgaacagagggggtttttgttgagaattctct 277  Q
      || || ||||| ||||  ||||||||||||    |||| || |||||||| ||||||| |||| ||| |||   ||||||||||||| | ||||||||    
T  41966465 ggctatttagctctaaaaacaactcgtggaaaataattcccagaatgccgtatgctctttactatgctcaaaccatgggggtttttgttcacaattctct 41966564  T
Q  278 tc 279  Q
    ||    
T  41966565 tc 41966566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 275
Target Start/End: Complemental strand, 26575361 - 26575164
Alignment:
Q  78 gttcacggctttggttttgatccgttaaacgtcgattacaaactcctcagaatctcttgtatcgttgatccacaatactctacttctgattcacatgtga 177  Q
    ||||||||||| ||||||||| | |||  || ||||||||||||||||||||||||||   |  | |||| |||| || ||  || |||| ||||||| |    
T  26575361 gttcacggcttcggttttgattctttatccggcgattacaaactcctcagaatctcttacttgctcgatctacaaaaccctttttatgatccacatgtta 26575262  T
Q  178 aactcttcagctcgaaaatgaactcgtggaaagaccttcctagtatgccgtacgctctttcctatcctcgaacagagggggtttttgttgagaattct 275  Q
     ||||||||||| |||||  ||||| ||||||    |||||| | | || |||||||||| |||| ||||||||  ||| ||||||||||||||||||    
T  26575261 gactcttcagcttgaaaacaaactcatggaaaataattcctaattttccttacgctctttactatactcgaacaatgggtgtttttgttgagaattct 26575164  T

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Target: scaffold0667 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0667
Description:

Target: scaffold0667; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 136
Target Start/End: Complemental strand, 4971 - 4913
Alignment:
Q  78 gttcacggctttggttttgatccgttaaacgtcgattacaaactcctcagaatctcttg 136  Q
    ||||||||||| ||||||||||| |||| || |||||||||| |||||||| |||||||    
T  4971 gttcacggcttcggttttgatcctttaaccggcgattacaaaatcctcagactctcttg 4913  T

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Target: chr7 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 45238368 - 45238296
Alignment:
Q  174 gtgaaactcttcagctcgaaaatgaactcgtggaaagaccttcctagtatgccgtacgctctttcctatcctc 246  Q
    |||| |||||||| ||| |||||||| ||||||||||  ||||||||||| || || ||||| | ||||||||    
T  45238368 gtgatactcttcacctcaaaaatgaattcgtggaaagtacttcctagtataccttatgctctatactatcctc 45238296  T

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