View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15175_low_4 (Length: 614)

Name: NF15175_low_4
Description: NF15175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15175_low_4
NF15175_low_4
[»] chr7 (41 HSPs)
chr7 (383-528)||(32884179-32884324)
chr7 (412-528)||(8675739-8675856)
chr7 (415-528)||(29893380-29893493)
chr7 (415-528)||(37972561-37972674)
chr7 (412-528)||(12740778-12740894)
chr7 (424-528)||(41827736-41827840)
chr7 (415-528)||(18838818-18838931)
chr7 (415-528)||(33891918-33892031)
chr7 (415-528)||(37328315-37328428)
chr7 (415-528)||(23101699-23101812)
chr7 (415-528)||(29614479-29614592)
chr7 (427-528)||(33383082-33383183)
chr7 (415-528)||(44256439-44256552)
chr7 (422-528)||(43172115-43172221)
chr7 (415-528)||(510054-510167)
chr7 (415-528)||(7993565-7993678)
chr7 (415-528)||(28034532-28034645)
chr7 (415-528)||(28342719-28342832)
chr7 (415-528)||(29585922-29586035)
chr7 (415-524)||(40460398-40460507)
chr7 (429-528)||(39028495-39028594)
chr7 (418-528)||(44121620-44121730)
chr7 (412-531)||(16709393-16709510)
chr7 (412-531)||(17683629-17683746)
chr7 (412-527)||(42610579-42610694)
chr7 (415-528)||(39784515-39784628)
chr7 (412-493)||(48136909-48136990)
chr7 (415-528)||(3023342-3023455)
chr7 (412-528)||(26201813-26201929)
chr7 (423-530)||(4639908-4640015)
chr7 (424-530)||(27148804-27148910)
chr7 (414-491)||(11735215-11735292)
chr7 (379-488)||(37915886-37915995)
chr7 (412-528)||(14741387-14741503)
chr7 (353-418)||(21486222-21486287)
chr7 (412-488)||(21024067-21024143)
chr7 (412-487)||(14732318-14732393)
chr7 (416-466)||(30823108-30823158)
chr7 (460-527)||(5772106-5772171)
chr7 (412-488)||(33497116-33497192)
chr7 (500-528)||(47067167-47067195)
[»] chr8 (32 HSPs)
chr8 (412-527)||(12522531-12522646)
chr8 (415-528)||(10295017-10295130)
chr8 (415-528)||(31625718-31625831)
chr8 (415-528)||(9288172-9288285)
chr8 (415-528)||(19717552-19717665)
chr8 (412-528)||(43166351-43166467)
chr8 (412-530)||(8029864-8029982)
chr8 (415-528)||(18305654-18305767)
chr8 (415-528)||(18958405-18958518)
chr8 (415-520)||(32497959-32498064)
chr8 (350-529)||(6388074-6388266)
chr8 (415-528)||(26856515-26856628)
chr8 (415-528)||(42305282-42305395)
chr8 (415-528)||(16364116-16364229)
chr8 (383-528)||(24082173-24082318)
chr8 (415-528)||(39467196-39467309)
chr8 (415-525)||(43308186-43308296)
chr8 (415-528)||(14781810-14781923)
chr8 (415-528)||(44725469-44725582)
chr8 (412-487)||(41393958-41394033)
chr8 (423-488)||(24067107-24067172)
chr8 (412-528)||(19484176-19484292)
chr8 (412-527)||(17234676-17234791)
chr8 (354-483)||(27878591-27878729)
chr8 (354-483)||(28018772-28018910)
chr8 (443-527)||(7760770-7760854)
chr8 (425-500)||(7466759-7466834)
chr8 (452-498)||(12522485-12522531)
chr8 (354-485)||(27915535-27915675)
chr8 (354-485)||(27961954-27962094)
chr8 (424-488)||(37131322-37131386)
chr8 (412-488)||(26620369-26620445)
[»] chr1 (47 HSPs)
chr1 (413-528)||(5494772-5494887)
chr1 (412-528)||(45272976-45273092)
chr1 (415-528)||(46328395-46328508)
chr1 (384-528)||(9322153-9322297)
chr1 (354-529)||(47371531-47371715)
chr1 (412-527)||(3583579-3583694)
chr1 (425-528)||(8140919-8141022)
chr1 (412-527)||(28403969-28404084)
chr1 (415-528)||(6312985-6313098)
chr1 (415-528)||(15834710-15834823)
chr1 (415-528)||(25612501-25612614)
chr1 (415-528)||(29396110-29396223)
chr1 (412-528)||(48966514-48966630)
chr1 (423-528)||(38535830-38535935)
chr1 (423-528)||(38558048-38558153)
chr1 (415-528)||(51702004-51702117)
chr1 (452-528)||(25830962-25831038)
chr1 (420-527)||(49971627-49971734)
chr1 (415-528)||(48177118-48177232)
chr1 (412-528)||(49453083-49453200)
chr1 (412-531)||(49236989-49237108)
chr1 (423-529)||(32760133-32760230)
chr1 (412-531)||(52182305-52182424)
chr1 (415-528)||(18798866-18798974)
chr1 (412-517)||(25253486-25253591)
chr1 (412-528)||(35177233-35177350)
chr1 (412-528)||(4005049-4005165)
chr1 (424-528)||(5209403-5209507)
chr1 (412-528)||(26757597-26757713)
chr1 (412-517)||(27257881-27257986)
chr1 (415-488)||(49231456-49231529)
chr1 (412-528)||(1243329-1243445)
chr1 (412-528)||(8147299-8147415)
chr1 (424-528)||(9192006-9192110)
chr1 (412-528)||(41353403-41353519)
chr1 (412-528)||(51106874-51106990)
chr1 (463-528)||(28387141-28387206)
chr1 (412-528)||(3593237-3593344)
chr1 (404-488)||(18954487-18954571)
chr1 (412-488)||(7798522-7798598)
chr1 (412-490)||(1108372-1108450)
chr1 (412-482)||(33886883-33886953)
chr1 (412-482)||(33957297-33957367)
chr1 (424-488)||(2293411-2293475)
chr1 (404-488)||(8122211-8122294)
chr1 (412-488)||(11579123-11579199)
chr1 (415-475)||(42304526-42304586)
[»] chr4 (43 HSPs)
chr4 (415-528)||(49501211-49501324)
chr4 (415-528)||(49507276-49507389)
chr4 (412-534)||(32889851-32889973)
chr4 (418-528)||(32322476-32322586)
chr4 (412-528)||(29510092-29510208)
chr4 (415-528)||(30967021-30967134)
chr4 (415-528)||(5800374-5800487)
chr4 (415-528)||(23987607-23987719)
chr4 (415-528)||(27768474-27768587)
chr4 (415-527)||(28484306-28484419)
chr4 (415-528)||(41725523-41725636)
chr4 (415-528)||(49834512-49834625)
chr4 (415-528)||(50018602-50018715)
chr4 (415-528)||(54341552-54341665)
chr4 (404-527)||(33138771-33138885)
chr4 (415-528)||(48261488-48261601)
chr4 (415-528)||(51321266-51321379)
chr4 (412-528)||(23671400-23671516)
chr4 (415-528)||(5441812-5441925)
chr4 (415-528)||(29855926-29856039)
chr4 (415-528)||(37828108-37828221)
chr4 (425-528)||(54853164-54853267)
chr4 (412-517)||(871782-871886)
chr4 (412-529)||(46286678-46286786)
chr4 (412-528)||(50517163-50517270)
chr4 (424-528)||(55165486-55165590)
chr4 (412-490)||(26491149-26491227)
chr4 (455-528)||(32683746-32683818)
chr4 (452-528)||(37916211-37916287)
chr4 (412-531)||(29469121-29469240)
chr4 (414-527)||(24966547-24966651)
chr4 (412-528)||(8084170-8084286)
chr4 (412-488)||(51967278-51967354)
chr4 (412-489)||(42937437-42937514)
chr4 (404-484)||(41470344-41470424)
chr4 (412-488)||(46862941-46863017)
chr4 (412-488)||(6487344-6487420)
chr4 (430-490)||(40487703-40487763)
chr4 (413-488)||(56424002-56424077)
chr4 (404-490)||(2326680-2326765)
chr4 (490-527)||(12754489-12754526)
chr4 (393-446)||(12754539-12754592)
chr4 (423-488)||(14334395-14334460)
[»] scaffold0110 (1 HSPs)
scaffold0110 (412-520)||(39311-39419)
[»] scaffold1128 (1 HSPs)
scaffold1128 (413-531)||(929-1047)
[»] scaffold0042 (1 HSPs)
scaffold0042 (415-528)||(57743-57856)
[»] chr3 (38 HSPs)
chr3 (415-528)||(52810766-52810879)
chr3 (415-523)||(20833310-20833418)
chr3 (412-528)||(21386508-21386624)
chr3 (374-528)||(48379558-48379721)
chr3 (415-528)||(37455255-37455368)
chr3 (415-528)||(52617651-52617764)
chr3 (415-526)||(17946638-17946749)
chr3 (425-528)||(18750051-18750154)
chr3 (417-527)||(7437600-7437710)
chr3 (415-528)||(31645940-31646053)
chr3 (415-528)||(51737366-51737479)
chr3 (415-528)||(54629259-54629372)
chr3 (424-528)||(44905543-44905647)
chr3 (415-528)||(23753068-23753181)
chr3 (415-528)||(26107737-26107850)
chr3 (415-528)||(39038498-39038611)
chr3 (345-519)||(33693226-33693409)
chr3 (415-528)||(40897539-40897652)
chr3 (443-528)||(50761807-50761892)
chr3 (415-528)||(50902988-50903101)
chr3 (344-485)||(16155168-16155318)
chr3 (413-527)||(43172889-43173003)
chr3 (412-529)||(4962755-4962872)
chr3 (423-528)||(7665552-7665657)
chr3 (412-516)||(45602441-45602545)
chr3 (452-528)||(45863231-45863307)
chr3 (415-528)||(36673831-36673944)
chr3 (412-528)||(49296077-49296193)
chr3 (412-528)||(8598620-8598736)
chr3 (427-527)||(21718452-21718552)
chr3 (413-488)||(25049872-25049947)
chr3 (352-488)||(49458359-49458504)
chr3 (412-528)||(42736268-42736384)
chr3 (415-488)||(22489511-22489584)
chr3 (412-528)||(53835923-53836039)
chr3 (412-490)||(53645337-53645415)
chr3 (412-488)||(9818588-9818664)
chr3 (412-488)||(40064279-40064355)
[»] chr2 (36 HSPs)
chr2 (424-528)||(214945-215049)
chr2 (415-528)||(6224256-6224369)
chr2 (412-529)||(15224190-15224307)
chr2 (415-528)||(28739973-28740086)
chr2 (415-528)||(7027313-7027426)
chr2 (415-528)||(25288573-25288686)
chr2 (412-528)||(34342199-34342315)
chr2 (412-527)||(40829596-40829713)
chr2 (415-528)||(10657840-10657953)
chr2 (415-528)||(28844995-28845108)
chr2 (424-528)||(13833107-13833211)
chr2 (418-528)||(379340-379450)
chr2 (348-517)||(2308665-2308843)
chr2 (415-528)||(33136028-33136139)
chr2 (415-528)||(3575251-3575364)
chr2 (415-528)||(26789195-26789308)
chr2 (350-529)||(31847171-31847360)
chr2 (425-528)||(18177681-18177784)
chr2 (412-529)||(18899952-18900069)
chr2 (463-527)||(3464051-3464115)
chr2 (412-488)||(35404343-35404419)
chr2 (345-473)||(18727595-18727732)
chr2 (412-488)||(3991774-3991850)
chr2 (404-488)||(12877687-12877771)
chr2 (412-488)||(15926379-15926455)
chr2 (422-485)||(11153384-11153447)
chr2 (412-488)||(19948539-19948615)
chr2 (412-488)||(33262854-33262930)
chr2 (412-488)||(38413478-38413554)
chr2 (412-490)||(13898475-13898553)
chr2 (412-490)||(14039092-14039170)
chr2 (424-490)||(32242242-32242308)
chr2 (412-490)||(32293912-32293989)
chr2 (412-517)||(3858446-3858551)
chr2 (452-527)||(43305035-43305111)
chr2 (500-528)||(43825299-43825327)
[»] chr6 (23 HSPs)
chr6 (412-530)||(16438665-16438783)
chr6 (350-528)||(2606856-2607043)
chr6 (415-528)||(7497507-7497620)
chr6 (415-528)||(30384743-30384856)
chr6 (412-528)||(31975675-31975791)
chr6 (415-528)||(31067841-31067954)
chr6 (415-528)||(14262115-14262228)
chr6 (415-528)||(34758758-34758871)
chr6 (415-528)||(4200130-4200243)
chr6 (415-528)||(31896046-31896159)
chr6 (393-525)||(28900842-28900965)
chr6 (423-527)||(3000202-3000306)
chr6 (412-528)||(1463694-1463810)
chr6 (412-528)||(6788061-6788177)
chr6 (412-530)||(10113803-10113921)
chr6 (387-477)||(33641286-33641376)
chr6 (412-488)||(31535083-31535159)
chr6 (404-488)||(7835379-7835463)
chr6 (424-490)||(13461372-13461438)
chr6 (462-528)||(34773807-34773872)
chr6 (412-488)||(8779604-8779680)
chr6 (412-488)||(31996271-31996347)
chr6 (412-487)||(21199556-21199631)
[»] chr5 (22 HSPs)
chr5 (418-528)||(1460828-1460938)
chr5 (415-528)||(4240145-4240258)
chr5 (415-528)||(4549937-4550050)
chr5 (415-528)||(13926341-13926454)
chr5 (415-528)||(37014264-37014377)
chr5 (374-528)||(34218430-34218584)
chr5 (412-531)||(16548869-16548988)
chr5 (415-528)||(5949522-5949634)
chr5 (415-527)||(40013384-40013496)
chr5 (412-517)||(29716815-29716920)
chr5 (415-528)||(39852780-39852893)
chr5 (412-528)||(5651211-5651327)
chr5 (410-526)||(15672703-15672819)
chr5 (415-528)||(13999773-13999886)
chr5 (412-528)||(7125189-7125305)
chr5 (412-532)||(37798144-37798263)
chr5 (424-527)||(21489862-21489965)
chr5 (407-488)||(25868800-25868881)
chr5 (412-488)||(2675098-2675174)
chr5 (412-528)||(28623191-28623307)
chr5 (412-485)||(21238783-21238856)
chr5 (452-488)||(29758707-29758743)
[»] scaffold1504 (1 HSPs)
scaffold1504 (415-528)||(1276-1389)
[»] scaffold0543 (1 HSPs)
scaffold0543 (415-528)||(10934-11047)
[»] scaffold0013 (1 HSPs)
scaffold0013 (345-528)||(89241-89424)
[»] scaffold0573 (1 HSPs)
scaffold0573 (393-525)||(8829-8952)
[»] scaffold0383 (1 HSPs)
scaffold0383 (415-461)||(16708-16754)
[»] scaffold0152 (2 HSPs)
scaffold0152 (415-461)||(20944-20990)
scaffold0152 (415-461)||(28811-28857)
[»] scaffold0246 (1 HSPs)
scaffold0246 (430-490)||(25642-25702)


Alignment Details
Target: chr7 (Bit Score: 94; Significance: 1e-45; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 383 - 528
Target Start/End: Complemental strand, 32884324 - 32884179
Alignment:
Q  383 tttacacgaatttatcgagttttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgt 482  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||||||||| ||||||||||  |||||||| ||||||| ||||||||||||||    
T  32884324 tttacacgagtttaccgagtgttaactcagtcaaaccttccgattttaccagaaacagagtttacctcagagttaactcgatttttgtacctaaaaacgt 32884225  T
Q  483 aaactcagtaagctcggagagttaacactcgatttgcggaacattg 528  Q
    |||||| |||| ||||||||||||||||||||||| ||||||||||    
T  32884224 aaactcggtaatctcggagagttaacactcgatttacggaacattg 32884179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 412 - 528
Target Start/End: Complemental strand, 8675856 - 8675739
Alignment:
Q  412 gtcaaacctttcgatttt-accagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacac 510  Q
    |||||||||||||||||| ||||||||| ||||||||||  ||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  8675856 gtcaaacctttcgatttttaccagaaaccgagtttaccttagagttaacacgattttggtacctaaaaacgttaactcggtaatctcggagagttaacac 8675757  T
Q  511 tcgatttgcggaacattg 528  Q
    |||||||||| |||||||    
T  8675756 tcgatttgcgaaacattg 8675739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 29893493 - 29893380
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    |||||||||||||| ||||||||||||||||||||  |||||||||||||||| |||| |||||| |||||||| |||| ||||||||||||||||||||    
T  29893493 aaacctttcgatttcaccagaaactgagtttacctcagagttaacacgatttttgtacttaaaaatgtaaactcggtaatctcggagagttaacactcga 29893394  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  29893393 tttgcggaacattg 29893380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 37972561 - 37972674
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| |||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||| |||| ||| || |||||||||||||    
T  37972561 aaaccttccgattttaccagaaactgagtttatctcagagttaacacgattttggtacctaaaaacgtaaactcggtaatctcagaaagttaacactcga 37972660  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  37972661 tttgcggaacattg 37972674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 412 - 528
Target Start/End: Complemental strand, 12740894 - 12740778
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    |||||||||| | ||||||||||| || ||||||||||  ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  12740894 gtcaaaccttccaattttaccagacaccgagtttacctcagagttaacacgattttggtacctaaaaacgtaaactcggtaatctcggagagttaacact 12740795  T
Q  512 cgatttgcggaacattg 528  Q
    ||||||||| |||||||    
T  12740794 cgatttgcgtaacattg 12740778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 424 - 528
Target Start/End: Complemental strand, 41827840 - 41827736
Alignment:
Q  424 gattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaa 523  Q
    ||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||| ||||||||||    
T  41827840 gattttaccagaaactgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcaataatctcagagagttaacactcaatttgcggaa 41827741  T
Q  524 cattg 528  Q
    |||||    
T  41827740 cattg 41827736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 18838931 - 18838818
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||    
T  18838931 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcga 18838832  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  18838831 tttgcggaacattg 18838818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 33891918 - 33892031
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| |||||||||||||||||||  |||| ||||||||||||||||||||    
T  33891918 aaaccttccaattttaccagaaaccgattttaccttagagttaacacgatttttgtacctaaaaacgtaaacttggtaatctcggagagttaacactcga 33892017  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  33892018 tttgcggaacattg 33892031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 37328428 - 37328315
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| |||||||||||||||  ||||||||||  |||||||||||||||| ||||||||||||||||||||  ||| |||||||||| |||||||||    
T  37328428 aaaccttccgattttaccagaaatcgagtttaccttagagttaacacgatttttgtacctaaaaacgtaaactcgataatctcggagagtcaacactcga 37328329  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  37328328 tttgcggaacattg 37328315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 23101812 - 23101699
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | ||||||||||||||||| |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| |||||||| |||||||||||    
T  23101812 aaaccttccaattttaccagaaactgattttaccttagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 23101713  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  23101712 tttgcggaacattg 23101699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 29614479 - 29614592
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||||| |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| |||||||| |||||||||||    
T  29614479 aaacctttcaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 29614578  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  29614579 tttgcggaacattg 29614592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 427 - 528
Target Start/End: Complemental strand, 33383183 - 33383082
Alignment:
Q  427 tttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacat 526  Q
    |||| ||||||| ||||||| ||  |||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  33383183 tttatcagaaaccgagtttatctcagagttaccacgattttggtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgcggaacat 33383084  T
Q  527 tg 528  Q
    ||    
T  33383083 tg 33383082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 44256439 - 44256552
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| |||||||||||||||  ||||||||||  |||||||||||||||| ||| ||||||||||||||||  ||| ||||||||||||||||||||    
T  44256439 aaaccttccgattttaccagaaatcgagtttacctcagagttaacacgatttttgtatctaaaaacgtaaactcgataatctcggagagttaacactcga 44256538  T
Q  515 tttgcggaacattg 528  Q
    ||||||| ||||||    
T  44256539 tttgcgggacattg 44256552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 422 - 528
Target Start/End: Complemental strand, 43172221 - 43172115
Alignment:
Q  422 tcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcgg 521  Q
    ||||||||||||||||  ||||||||||  ||||||||| ||||||| |||||||||| |||||||| |||| ||| |||||||||||||||||||||||    
T  43172221 tcgattttaccagaaatcgagtttacctccgagttaacatgattttgatacctaaaaatgtaaactcggtaaactcagagagttaacactcgatttgcgg 43172122  T
Q  522 aacattg 528  Q
    |||||||    
T  43172121 aacattg 43172115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 510167 - 510054
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| |||||||| |||||||||||    
T  510167 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 510068  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  510067 tttgcggaacattg 510054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 7993678 - 7993565
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| |||||||||||||||| ||||||||||   ||||||||||||||| |||| ||||||  || |||| |||| ||||||||||||||||||||    
T  7993678 aaaccttccgattttaccagaaaccgagtttacctcatagttaacacgatttttgtacttaaaaatatatactcggtaatctcggagagttaacactcga 7993579  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  7993578 tttgcggaacattg 7993565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 28034532 - 28034645
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || ||||| |  |||||||||||||||| |||| ||||||||||||||| |||| ||| ||||||||||||||||    
T  28034532 aaaccttccaattttaccagaaaccgattttacatcagagttaacacgatttttgtacataaaaacgtaaactcggtaatctcagagagttaacactcga 28034631  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  28034632 tttgcggaacattg 28034645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 28342832 - 28342719
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| |||||||| |||||||||||    
T  28342832 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 28342733  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  28342732 tttgcggaacattg 28342719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 29586035 - 29585922
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| |||||||||| ||||| || |||||||  |||||||||||||||| |||||||||||||||||||| |||| ||| |||||||||||||| |    
T  29586035 aaaccttccgattttacccgaaaccgactttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcagagagttaacactcaa 29585936  T
Q  515 tttgcggaacattg 528  Q
    | ||||||||||||    
T  29585935 tctgcggaacattg 29585922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 524
Target Start/End: Original strand, 40460398 - 40460507
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| |||||||||| ||||||||| |||| |||| |||||||||||||||    
T  40460398 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaagcgtaaactcggtaatctcgaagagttaacactcga 40460497  T
Q  515 tttgcggaac 524  Q
    ||||||||||    
T  40460498 tttgcggaac 40460507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 429 - 528
Target Start/End: Complemental strand, 39028594 - 39028495
Alignment:
Q  429 taccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattg 528  Q
    |||||||||| || |||||||  ||||| |||| ||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  39028594 taccagaaaccgattttacctcagagtttacacaatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgcggaacattg 39028495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 418 - 528
Target Start/End: Original strand, 44121620 - 44121730
Alignment:
Q  418 cctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgattt 517  Q
    |||| |||||||||||||||| || |||||||   ||||||||||||||| ||||||||||||||||| || |||| ||| |||||||||||||||||||    
T  44121620 ccttccgattttaccagaaaccgaatttacctcatagttaacacgatttttgtacctaaaaacgtaaattcggtaatctcagagagttaacactcgattt 44121719  T
Q  518 gcggaacattg 528  Q
    |||||| ||||    
T  44121720 gcggaatattg 44121730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 412 - 531
Target Start/End: Complemental strand, 16709510 - 16709393
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    |||||||||| ||| |||||||  ||||||||||||||  |||||| |||||||||||||||||||||||||||||| |||| |||  |  |||||||||    
T  16709510 gtcaaaccttccgagtttacca--aactgagtttacctcagagttaccacgattttggtacctaaaaacgtaaactcggtaaactcataatgttaacact 16709413  T
Q  512 cgatttgcggaacattgctt 531  Q
     |||||||||||||||||||    
T  16709412 tgatttgcggaacattgctt 16709393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 412 - 531
Target Start/End: Complemental strand, 17683746 - 17683629
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    |||||||||| ||| |||||||  ||||||||||||||  |||||| |||||||||||||||||||||||||||||| |||| |||  |  |||||||||    
T  17683746 gtcaaaccttccgagtttacca--aactgagtttacctcagagttaccacgattttggtacctaaaaacgtaaactcggtaaactcataatgttaacact 17683649  T
Q  512 cgatttgcggaacattgctt 531  Q
     |||||||||||||||||||    
T  17683648 tgatttgcggaacattgctt 17683629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 412 - 527
Target Start/End: Complemental strand, 42610694 - 42610579
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||||||  |||||||||||||||  |||||||||   | ||||||||||||||||||||||| ||||||| || |||| ||| |||||||||||||    
T  42610694 gtcaaaccttctgattttaccagaaaccaagtttacctcaaatttaacacgattttggtacctaaacacgtaaattcggtaaactcagagagttaacact 42610595  T
Q  512 cgatttgcggaacatt 527  Q
    | ||||||||||||||    
T  42610594 caatttgcggaacatt 42610579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 39784628 - 39784515
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| |||| ||| |||||||||||    
T  39784628 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcgaagatttaacactcga 39784529  T
Q  515 tttgcggaacattg 528  Q
    ||| ||||||||||    
T  39784528 tttacggaacattg 39784515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 412 - 493
Target Start/End: Original strand, 48136909 - 48136990
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaa 493  Q
    ||||||||||   |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  48136909 gtcaaaccttctaattttaccagaaactgagtttacctcagagttaacacgattttggtacctaaaaacgtaaactcggtaa 48136990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 3023455 - 3023342
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||| ||||||| || |||||||   |||||||| |||||| |||||||||||| |||||||  ||| ||||||||||||||||||||    
T  3023455 aaaccttccaattttatcagaaaccgattttacctcaaagttaacatgatttttgtacctaaaaacataaactcgataatctcggagagttaacactcga 3023356  T
Q  515 tttgcggaacattg 528  Q
    |||||||| |||||    
T  3023355 tttgcggatcattg 3023342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 412 - 528
Target Start/End: Original strand, 26201813 - 26201929
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| || |||||||| ||  || |||||||||||  ||||| |||||||||||||||||||||| ||||| || |||| |||||  ||||||||||    
T  26201813 gtcaaacattccgattttagcaataattgagtttacctccgagtttacacgattttggtacctaaaaatgtaaattcggtaaactcggcaagttaacact 26201912  T
Q  512 cgatttgcggaacattg 528  Q
    ||||||| |||||||||    
T  26201913 cgatttgtggaacattg 26201929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 423 - 530
Target Start/End: Original strand, 4639908 - 4640015
Alignment:
Q  423 cgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcgga 522  Q
    |||||||||||||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| |||| ||||||| |||    
T  4639908 cgattttaccagaaatagagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtgga 4640007  T
Q  523 acattgct 530  Q
    ||||||||    
T  4640008 acattgct 4640015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 424 - 530
Target Start/End: Complemental strand, 27148910 - 27148804
Alignment:
Q  424 gattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaa 523  Q
    ||||||| | |||| |||| ||||||  || |||||||||||||| |||||||||||||||||||  ||| ||  | |||||||||||||||||| ||||    
T  27148910 gattttagctgaaattgaggttacctccgatttaacacgattttgatacctaaaaacgtaaactcgataaactttgcgagttaacactcgatttgtggaa 27148811  T
Q  524 cattgct 530  Q
    |||||||    
T  27148810 cattgct 27148804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 414 - 491
Target Start/End: Original strand, 11735215 - 11735292
Alignment:
Q  414 caaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagt 491  Q
    ||||| || |||||||||||||||  ||||||||||  |||||||||||||||||| |||||||| ||||||||||||    
T  11735215 caaacattccgattttaccagaaatcgagtttacctccgagttaacacgattttgggacctaaaatcgtaaactcagt 11735292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 379 - 488
Target Start/End: Original strand, 37915886 - 37915995
Alignment:
Q  379 caattttacacgaatttatcgagttttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaa 478  Q
    |||||| |||||| ||||  |||| |||||||||||||||  ||||||||||||| |||  |||||||||| |||||||| ||| |||| | |||||||     
T  37915886 caatttcacacgagtttactgagtgttaactcggtcaaactgttcgattttaccataaatcgagtttacctctgagttaaaacgcttttagcacctaaac 37915985  T
Q  479 acgtaaactc 488  Q
    ||||||||||    
T  37915986 acgtaaactc 37915995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 412 - 528
Target Start/End: Complemental strand, 14741503 - 14741387
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| || ||||||||| |||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| ||||     
T  14741503 gtcaaactttccgattttactagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacg 14741404  T
Q  512 cgatttgcggaacattg 528  Q
    ||||||| |||||||||    
T  14741403 cgatttgtggaacattg 14741387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 353 - 418
Target Start/End: Complemental strand, 21486287 - 21486222
Alignment:
Q  353 ttagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttttaactcggtcaaac 418  Q
    ||||||||||||||||||| ||||||| | ||||||||| |||| ||||| |||||||| ||||||    
T  21486287 ttagatgtaaactcgtaaatttcggtcgagtttacacgagtttaccgagtgttaactcgatcaaac 21486222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 488
Target Start/End: Complemental strand, 21024143 - 21024067
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||| || |||||| |||| |||| ||||||||||  ||||||||||| |||||  |||||||| |||||||||    
T  21024143 gtcaaactttccgatttcaccaaaaaccgagtttaccttcgagttaacacgtttttgtcacctaaaatcgtaaactc 21024067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 487
Target Start/End: Original strand, 14732318 - 14732393
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaact 487  Q
    ||||||| || |||||| |||| ||||  |||||||||  ||||||||||| |||||  |||||||||||||||||    
T  14732318 gtcaaactttccgatttcaccaaaaaccaagtttacctccgagttaacacgtttttgccacctaaaaacgtaaact 14732393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 416 - 466
Target Start/End: Complemental strand, 30823158 - 30823108
Alignment:
Q  416 aacctttcgattttaccagaaactgagtttacctatgagttaacacgattt 466  Q
    |||||| ||||||||| |||||| ||||||||||  |||||||||||||||    
T  30823158 aaccttccgattttactagaaaccgagtttacctcagagttaacacgattt 30823108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 460 - 527
Target Start/End: Original strand, 5772106 - 5772171
Alignment:
Q  460 acgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacatt 527  Q
    ||||||||||||| |||||| ||||||||||||| ||||  ||||  ||||||||||| || ||||||    
T  5772106 acgattttggtacataaaaatgtaaactcagtaaactcgacgagt--acactcgatttacgaaacatt 5772171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 488
Target Start/End: Original strand, 33497116 - 33497192
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||| || | |||||| ||||||  ||||||||||  ||||| ||||||||||| ||| |||||| ||||||||    
T  33497116 gtcaaacattccaattttatcagaaatcgagtttacctccgagttgacacgattttgatacttaaaaatgtaaactc 33497192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 500 - 528
Target Start/End: Complemental strand, 47067195 - 47067167
Alignment:
Q  500 agagttaacactcgatttgcggaacattg 528  Q
    |||||||||||||||||||||||||||||    
T  47067195 agagttaacactcgatttgcggaacattg 47067167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 5e-42; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 412 - 527
Target Start/End: Original strand, 12522531 - 12522646
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    |||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||    
T  12522531 gtcaaaccttccgattttaccagaaaccgagtttacctctgagttaacacgattttggtacctaaaaatgcaaacttagtaaactcggagagttaacact 12522630  T
Q  512 cgatttgcggaacatt 527  Q
    ||||||||||||||||    
T  12522631 cgatttgcggaacatt 12522646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 10295017 - 10295130
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| |||||||||||||||| ||||||||||  |||||||||||||| | |||||||||||||||||||| |||| ||||||||||||||||||||    
T  10295017 aaaccttccgattttaccagaaaccgagtttacctcagagttaacacgattgttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcga 10295116  T
Q  515 tttgcggaacattg 528  Q
    ||| ||||||||||    
T  10295117 tttacggaacattg 10295130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 31625831 - 31625718
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| |||||||||||||||| ||||||||||  |||||||||| ||||| ||||||||||| |||||||| |||| ||||||||||||||||||||    
T  31625831 aaaccttccgattttaccagaaaccgagtttacctcagagttaacacaatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcga 31625732  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  31625731 tttgcggaacattg 31625718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 9288172 - 9288285
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| |||||||||||||||||||| |||| |||| |||||||||||||||    
T  9288172 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcgaagagttaacactcga 9288271  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  9288272 tttgcggaacattg 9288285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 19717552 - 19717665
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||    
T  19717552 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcga 19717651  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  19717652 tttgcggaacattg 19717665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 412 - 528
Target Start/End: Original strand, 43166351 - 43166467
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    |||||||||||| ||||||||||||||| | |||||||  |||||||||||||||| |||||||||||||||||||| |||| |||| | | ||||||||    
T  43166351 gtcaaacctttcaattttaccagaaacttattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcgaaaaattaacact 43166450  T
Q  512 cgatttgcggaacattg 528  Q
    |||||||||||||||||    
T  43166451 cgatttgcggaacattg 43166467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 412 - 530
Target Start/End: Original strand, 8029864 - 8029982
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    |||||||||| |||||||||||||||  ||||||| ||  |||||||||||||||||||||||||| ||||||||||  ||| |||| ||||||||||||    
T  8029864 gtcaaaccttccgattttaccagaaatcgagtttatctcagagttaacacgattttggtacctaaacacgtaaactcgataaactcgaagagttaacact 8029963  T
Q  512 cgatttgcggaacattgct 530  Q
    |||||| ||||||||||||    
T  8029964 cgatttacggaacattgct 8029982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 18305654 - 18305767
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| |||||||||||||||| ||| |||| ||||||||||||||||||||    
T  18305654 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaagctcggtaatctcggagagttaacactcga 18305753  T
Q  515 tttgcggaacattg 528  Q
    |||||| |||||||    
T  18305754 tttgcgtaacattg 18305767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 18958405 - 18958518
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | ||||||||||||||  | |||||||  |||||||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||    
T  18958405 aaaccttccaattttaccagaaaccaattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcga 18958504  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  18958505 tttgcggaacattg 18958518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 415 - 520
Target Start/End: Complemental strand, 32498064 - 32497959
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| ||||||||| |||||| ||||||||||  |||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||| |    
T  32498064 aaaccttccgattttactagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcaa 32497965  T
Q  515 tttgcg 520  Q
    ||||||    
T  32497964 tttgcg 32497959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 350 - 529
Target Start/End: Original strand, 6388074 - 6388266
Alignment:
Q  350 tttttagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttt----taactcggtcaaac--------ctttc-gattttaccagaa 436  Q
    ||||||||| ||||||||||||| |||||||| ||||||||| |||||||||| |    ||||| ||||||||        ||||| |||||||||| ||    
T  6388074 tttttagatttaaactcgtaaaactcggtcaagtttacacgagtttatcgagtgtacgttaacttggtcaaacttgtcaaactttccgattttaccataa 6388173  T
Q  437 actgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattgc 529  Q
    || ||||||||||  ||||||||||||||||||||||||||||| |||| ||  ||| ||||| |||||| ||||| ||||||||||||||||    
T  6388174 acagagtttacctccgagttaacacgattttggtacctaaaaacataaattcgataaactcggcgagttaccactcaatttgcggaacattgc 6388266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 26856628 - 26856515
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    |||||||  ||||||||||||||| ||||||||||  |||||||||||||||| ||||||| |||| ||||||| |||| ||||||||||||||||||||    
T  26856628 aaaccttctgattttaccagaaaccgagtttacctcagagttaacacgatttttgtacctataaacataaactcggtaatctcggagagttaacactcga 26856529  T
Q  515 tttgcggaacattg 528  Q
    |||| | |||||||    
T  26856528 tttgtgtaacattg 26856515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 42305282 - 42305395
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  ||||||||||||||||  |||||||||| |||||||| |||| ||||||||||||||||||||    
T  42305282 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttatacctaaaaaggtaaactcggtaatctcggagagttaacactcga 42305381  T
Q  515 tttgcggaacattg 528  Q
    |||| |||||||||    
T  42305382 tttgtggaacattg 42305395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 16364229 - 16364116
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| ||||||||| |||||| || |||||||  |||||||||||||||| ||||||||||||||||| ||  ||| |||  |||||||||||||||    
T  16364229 aaaccttccgattttactagaaaccgaatttaccttagagttaacacgatttttgtacctaaaaacgtaaattcgataatctcatagagttaacactcga 16364130  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  16364129 tttgcggaacattg 16364116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 383 - 528
Target Start/End: Complemental strand, 24082318 - 24082173
Alignment:
Q  383 tttacacgaatttatcgagttttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgt 482  Q
    |||| |||| |||| ||||| |||||| |||||||||||||||||||||||||||| || |||||||  |  ||||||| |||||||||||||||| | |    
T  24082318 tttatacgagtttaccgagtgttaacttggtcaaacctttcgattttaccagaaaccgaatttacctcagtattaacacaattttggtacctaaaatcat 24082219  T
Q  483 aaactcagtaagctcggagagttaacactcgatttgcggaacattg 528  Q
    ||||| ||||| ||||  |||||||||||| |||||  ||||||||    
T  24082218 aaacttagtaaactcgtcgagttaacactcaatttgtagaacattg 24082173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 39467196 - 39467309
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||   | |||||||  ||||||| |||||||| |||||||||||||||||| | |||| ||||||||||||||||||||    
T  39467196 aaaccttccaattttaccagaaatcaattttaccttagagttaatacgatttttgtacctaaaaacgtaaacgcggtaatctcggagagttaacactcga 39467295  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  39467296 tttgcggaacattg 39467309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 415 - 525
Target Start/End: Original strand, 43308186 - 43308296
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || ||||  |  |||||||||||||||||||||||||||||| ||||||  ||| |||| |||||||||||||||    
T  43308186 aaaccttccaattttaccagaaaccgattttatatcagagttaacacgattttggtacctaaaaacgcaaactcgataatctcgaagagttaacactcga 43308285  T
Q  515 tttgcggaaca 525  Q
    |||||||||||    
T  43308286 tttgcggaaca 43308296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 14781810 - 14781923
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  ||||||||||||||||  |||||||||| || |||||  ||| |||||||| |||||||||||    
T  14781810 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttatacctaaaaatgtcaactcgataatctcggagatttaacactcga 14781909  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  14781910 tttgcggaacattg 14781923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 44725469 - 44725582
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| |||| |||  ||| ||| |||| |||||||||||    
T  44725469 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaatctcgataatctctgagatttaacactcga 44725568  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  44725569 tttgcggaacattg 44725582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 412 - 487
Target Start/End: Complemental strand, 41394033 - 41393958
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaact 487  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||| ||||||||||||||||||    
T  41394033 gtcaaacctttcgattttatcagaaactgagtttacctccgaattaacacgattttgatacctaaaaacgtaaact 41393958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 423 - 488
Target Start/End: Complemental strand, 24067172 - 24067107
Alignment:
Q  423 cgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||||||||||| |||||| ||||  ||||| |||||||||||||||||||||||||||||||    
T  24067172 cgattttaccagaaattgagttcacctccgagttgacacgattttggtacctaaaaacgtaaactc 24067107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 412 - 528
Target Start/End: Complemental strand, 19484292 - 19484176
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| || |||||||||||||||  ||||||||||  ||||||||||| |||| | ||||||| || ||||||| |||| ||||  ||||| ||||     
T  19484292 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacataaactcggtaaactcgccgagttgacacg 19484193  T
Q  512 cgatttgcggaacattg 528  Q
    ||||||| |||||||||    
T  19484192 cgatttgtggaacattg 19484176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 412 - 527
Target Start/End: Complemental strand, 17234791 - 17234676
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| || |||||||||||||||  ||||||||||  ||||| | | |||||||||||||||||||| |||||  |||| ||| | ||||||||| |    
T  17234791 gtcaaacattccgattttaccagaaatcgagtttacctccgagttgataggattttggtacctaaaaacgcaaacttggtaaactcagcgagttaacatt 17234692  T
Q  512 cgatttgcggaacatt 527  Q
    |||||||  |||||||    
T  17234691 cgatttgttgaacatt 17234676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 354 - 483
Target Start/End: Original strand, 27878591 - 27878729
Alignment:
Q  354 tagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttttaactcg---------gtcaaacctttcgattttaccagaaactgagtt 444  Q
    |||||||||||| |||||| |||||| | ||||||||| || ||||||| |||||||          |||||||||  |||||||||||||||| || ||    
T  27878591 tagatgtaaacttgtaaaactcggtcgagtttacacgagttcatcgagtgttaactctatcaaactcgtcaaacctaccgattttaccagaaaccgaatt 27878690  T
Q  445 tacctatgagttaacacgattttggtacctaaaaacgta 483  Q
    ||| |  |||||||||||||||||||||||||| |||||    
T  27878691 tacatccgagttaacacgattttggtacctaaacacgta 27878729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 354 - 483
Target Start/End: Original strand, 28018772 - 28018910
Alignment:
Q  354 tagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttttaactcg---------gtcaaacctttcgattttaccagaaactgagtt 444  Q
    |||||||||||| |||||| |||||| | ||||||||| || ||||||| |||||||          |||||||||  |||||||||||||||| || ||    
T  28018772 tagatgtaaacttgtaaaactcggtcgagtttacacgagttcatcgagtgttaactctatcaaactcgtcaaacctaccgattttaccagaaaccgaatt 28018871  T
Q  445 tacctatgagttaacacgattttggtacctaaaaacgta 483  Q
    ||| |  |||||||||||||||||||||||||| |||||    
T  28018872 tacatccgagttaacacgattttggtacctaaacacgta 28018910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 443 - 527
Target Start/End: Complemental strand, 7760854 - 7760770
Alignment:
Q  443 tttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacatt 527  Q
    |||||||  ||||| ||||||||||| ||||||||||  |||||||||||| ||||   ||||||||||||||||| ||||||||    
T  7760854 tttaccttcgagttgacacgattttgatacctaaaaatataaactcagtaaactcgataagttaacactcgatttgtggaacatt 7760770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 425 - 500
Target Start/End: Complemental strand, 7466834 - 7466759
Alignment:
Q  425 attttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcgga 500  Q
    |||||| |||||||||| |||||||  |||||||||||||||| |||| ||||||| ||||||| |||| ||||||    
T  7466834 attttatcagaaactgattttacctcagagttaacacgatttttgtacttaaaaacataaactcggtaatctcgga 7466759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 452 - 498
Target Start/End: Original strand, 12522485 - 12522531
Alignment:
Q  452 gagttaacacgattttggtacctaaaaacgtaaactcagtaagctcg 498  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||    
T  12522485 gagttaacacgattttggtacctaaaaacgtaaacttggtaagctcg 12522531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 485
Target Start/End: Original strand, 27915535 - 27915675
Alignment:
Q  354 tagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttttaactcggtcaaac---------ctttcgattttaccagaaactgagtt 444  Q
    |||||||||||| |||||| |||||| | ||||||||| || ||||||| |||||||||||||||         ||  |||||||| ||||||  || ||    
T  27915535 tagatgtaaacttgtaaaactcggtcgagtttacacgagttcatcgagtgttaactcggtcaaactcgtcaaacctaccgattttatcagaaatcgaatt 27915634  T
Q  445 tacctatgagttaacacgattttggtacctaaaaacgtaaa 485  Q
    ||  | |||||||||||||||||||||| |||| |||||||    
T  27915635 taaatctgagttaacacgattttggtacataaacacgtaaa 27915675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 485
Target Start/End: Original strand, 27961954 - 27962094
Alignment:
Q  354 tagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttttaactcggtcaaac---------ctttcgattttaccagaaactgagtt 444  Q
    |||||||||||| |||||| |||||| | ||||||||| || ||||||| |||||||||||||||         ||  |||||||| ||||||  || ||    
T  27961954 tagatgtaaacttgtaaaactcggtcgagtttacacgagttcatcgagtgttaactcggtcaaactcgtcaaacctaccgattttatcagaaatcgaatt 27962053  T
Q  445 tacctatgagttaacacgattttggtacctaaaaacgtaaa 485  Q
    ||  | |||||||||||||||||||||| |||| |||||||    
T  27962054 taaatctgagttaacacgattttggtacataaacacgtaaa 27962094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 424 - 488
Target Start/End: Original strand, 37131322 - 37131386
Alignment:
Q  424 gattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    |||||||||||||   ||||||||||  ||||| |||||||||||||||||||||| ||||||||    
T  37131322 gattttaccagaagtcgagtttacctccgagttgacacgattttggtacctaaaaatgtaaactc 37131386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 488
Target Start/End: Original strand, 26620369 - 26620445
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||| ||||||||||| |||||||||| ||||||    |||||||||||||| | || |||||||  |||||||    
T  26620369 gtcaaacttttcgattttatcagaaactgaatttaccaccaagttaacacgatttcgatatctaaaaatataaactc 26620445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 1e-39; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 413 - 528
Target Start/End: Original strand, 5494772 - 5494887
Alignment:
Q  413 tcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactc 512  Q
    |||||||||  ||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  5494772 tcaaaccttctgattttaccagaaaccgagtttacctcagagttaacacgattttggtacctaaaaacgtaaactcggtaatctcggagagttaacactc 5494871  T
Q  513 gatttgcggaacattg 528  Q
     |||||||||||||||    
T  5494872 aatttgcggaacattg 5494887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 412 - 528
Target Start/End: Complemental strand, 45273092 - 45272976
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    |||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||| ||||||||||||||||||||  ||| |||||||||||||||||    
T  45273092 gtcaaaccttccgattttaccagaaaccgagtttacctcagagttaacacaatttttgtacctaaaaacgtaaactcgataatctcggagagttaacact 45272993  T
Q  512 cgatttgcggaacattg 528  Q
    |||||||||||||||||    
T  45272992 cgatttgcggaacattg 45272976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 46328508 - 46328395
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| |||||||| ||||||| ||||||||||  |||||||||||||||| |||||||||||||||||||| |||| |||||||| |||||||||||    
T  46328508 aaaccttccgattttaacagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagaattaacactcga 46328409  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  46328408 tttgcggaacattg 46328395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 384 - 528
Target Start/End: Original strand, 9322153 - 9322297
Alignment:
Q  384 ttacacgaatttatcgagttttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgta 483  Q
    |||||||| |||| ||||| ||||||| |||||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| |||    
T  9322153 ttacacgagtttaccgagtgttaactcagtcaaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgta 9322252  T
Q  484 aactcagtaagctcggagagttaacactcgatttgcggaacattg 528  Q
    |||||  ||| |||||||| |||||||||||||| ||||||||||    
T  9322253 aactcgataatctcggagatttaacactcgatttacggaacattg 9322297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 354 - 529
Target Start/End: Original strand, 47371531 - 47371715
Alignment:
Q  354 tagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttttaactcggtcaaac---------ctttcgattttaccagaaactgagtt 444  Q
    ||||||||||||||||||| |||||| | ||||||||| |||| ||||| |||||||||||||||         ||| |||||||||||||||  |||||    
T  47371531 tagatgtaaactcgtaaaactcggtcgagtttacacgagtttaccgagtgttaactcggtcaaactcggcaaaccttccgattttaccagaaatcgagtt 47371630  T
Q  445 tacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattgc 529  Q
    |||||  |||||||||||||||||||||||||  ||||||||||  ||| ||| ||| |||||||||||||||||| ||||||||    
T  47371631 tacctccgagttaacacgattttggtacctaagtacgtaaactcgataaactcagagtgttaacactcgatttgcgaaacattgc 47371715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 412 - 527
Target Start/End: Original strand, 3583579 - 3583694
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| || ||||||||| |||||| |||||||| | | |||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  3583579 gtcaaactttccgattttactagaaaccgagtttacttctaagttaacacgatttcggtacctaaaaacgtaaactcggtaaactcggagagttaacact 3583678  T
Q  512 cgatttgcggaacatt 527  Q
    ||||||||||||||||    
T  3583679 cgatttgcggaacatt 3583694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 425 - 528
Target Start/End: Original strand, 8140919 - 8141022
Alignment:
Q  425 attttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaac 524  Q
    |||||||||||||  || |||||||  |||||||||||||||| ||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||    
T  8140919 attttaccagaaatcgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgataatctcggagagttaacactcgatttgcggaac 8141018  T
Q  525 attg 528  Q
    ||||    
T  8141019 attg 8141022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 412 - 527
Target Start/End: Original strand, 28403969 - 28404084
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| |||||||||||  |||||| || |||||||   ||||||||||||||||||||||||||| |||||||||||||  ||| ||||||||||||    
T  28403969 gtcaaacatttcgattttattagaaaccgaatttaccttcaagttaacacgattttggtacctaaaaatgtaaactcagtaaattcgaagagttaacact 28404068  T
Q  512 cgatttgcggaacatt 527  Q
    ||||||||||||||||    
T  28404069 cgatttgcggaacatt 28404084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 6313098 - 6312985
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| |||||||| |||||||||||    
T  6313098 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 6312999  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  6312998 tttgcggaacattg 6312985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 15834710 - 15834823
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | ||||||||| |||  || |||||||  |||||||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||    
T  15834710 aaaccttccaattttaccaaaaatcgaatttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcga 15834809  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  15834810 tttgcggaacattg 15834823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 25612614 - 25612501
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| |||||||| |||||||||||    
T  25612614 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 25612515  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  25612514 tttgcggaacattg 25612501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 29396110 - 29396223
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| |||||||| |||||||||||    
T  29396110 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 29396209  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  29396210 tttgcggaacattg 29396223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 412 - 528
Target Start/End: Original strand, 48966514 - 48966630
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    |||||||||| | |||| | ||||||   |||||||||  |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||| ||    
T  48966514 gtcaaaccttccaatttcatcagaaatcaagtttacctcagagttaacacgattttggtacctaaacacgtaaactcagtaaactcgaagagttaaccct 48966613  T
Q  512 cgatttgcggaacattg 528  Q
    |||||||||||||||||    
T  48966614 cgatttgcggaacattg 48966630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 423 - 528
Target Start/End: Original strand, 38535830 - 38535935
Alignment:
Q  423 cgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcgga 522  Q
    ||||||||||||||||  |||||||||  |||||||||| ||||| ||| |||||||||||||||| |||| || |||||||||| ||||||||||||||    
T  38535830 cgattttaccagaaacccagtttacctcagagttaacacaatttttgtaactaaaaacgtaaactcggtaatcttggagagttaaaactcgatttgcgga 38535929  T
Q  523 acattg 528  Q
    ||||||    
T  38535930 acattg 38535935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 423 - 528
Target Start/End: Original strand, 38558048 - 38558153
Alignment:
Q  423 cgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcgga 522  Q
    ||||||||||||||||  |||||||||  |||||||||| ||||| ||| |||||||||||||||| |||| || |||||||||| ||||||||||||||    
T  38558048 cgattttaccagaaacccagtttacctcagagttaacacaatttttgtaactaaaaacgtaaactcggtaatcttggagagttaaaactcgatttgcgga 38558147  T
Q  523 acattg 528  Q
    ||||||    
T  38558148 acattg 38558153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 51702117 - 51702004
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||||  |||||||||||||| || |||||||  |||||||||| ||||| ||||||||||| ||||||||  ||| |||||||| |||||||||||    
T  51702117 aaaccttttaattttaccagaaaccgattttacctcagagttaacacaatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 51702018  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  51702017 tttgcggaacattg 51702004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 452 - 528
Target Start/End: Original strand, 25830962 - 25831038
Alignment:
Q  452 gagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattg 528  Q
    |||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||    
T  25830962 gagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgtggaacattg 25831038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 420 - 527
Target Start/End: Original strand, 49971627 - 49971734
Alignment:
Q  420 tttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgc 519  Q
    ||||||||||||||||||  ||||||||||  ||||| ||||||||||||||||||||||||||||||| |||| ||| |  |||||||| ||||||||     
T  49971627 tttcgattttaccagaaaacgagtttacctccgagttgacacgattttggtacctaaaaacgtaaactcggtaaactcagtaagttaacattcgatttgt 49971726  T
Q  520 ggaacatt 527  Q
    ||||||||    
T  49971727 ggaacatt 49971734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 48177118 - 48177232
Alignment:
Q  415 aaacctttcgattttaccagaaa-ctgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcg 513  Q
    ||||||| | ||||||||||||| | || |||||||  ||||||||||||||||  |||||||||||||||||||||||| ||| ||||||||| |||||    
T  48177118 aaaccttccaattttaccagaaaaccgattttacctcagagttaacacgatttttctacctaaaaacgtaaactcagtaatctcagagagttaatactcg 48177217  T
Q  514 atttgcggaacattg 528  Q
    ||||||| |||||||    
T  48177218 atttgcgaaacattg 48177232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 412 - 528
Target Start/End: Original strand, 49453083 - 49453200
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgatttt-ggtacctaaaaacgtaaactcagtaagctcggagagttaacac 510  Q
    ||||||||||  |||||| |||||||  ||||||||||  |||||||||||||||| |||||||||| || ||||||  |||| |||||| |||||||||    
T  49453083 gtcaaaccttatgatttttccagaaatcgagtttacctcagagttaacacgatttttggtacctaaacacataaactaggtaaactcggacagttaacac 49453182  T
Q  511 tcgatttgcggaacattg 528  Q
    ||||||||||||||||||    
T  49453183 tcgatttgcggaacattg 49453200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 412 - 531
Target Start/End: Original strand, 49236989 - 49237108
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||||||||||||||||||||||| ||| ||| ||  || |||||||| |||||||||||||| || |||||||  ||| |||| ||  ||||||||    
T  49236989 gtcaaacctttcgattttaccagaaaccgagcttaactccgaattaacacggttttggtacctaaacacataaactcgataaactcgaagtattaacact 49237088  T
Q  512 cgatttgcggaacattgctt 531  Q
    |||||| |||||||||||||    
T  49237089 cgatttacggaacattgctt 49237108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 423 - 529
Target Start/End: Original strand, 32760133 - 32760230
Alignment:
Q  423 cgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcgga 522  Q
    ||||||||| |||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||         ||| ||||||||||||||||||||    
T  32760133 cgattttactagaaaccgagtttacctcagagttaacacgattttggtacctaaaaacgtaaactca---------gagtgttaacactcgatttgcgga 32760223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 412 - 531
Target Start/End: Complemental strand, 52182424 - 52182305
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| ||||||||||||||||||  || |||||||  || || |||||||||  ||||||||||||||||||||  ||| ||||| |||||||||||    
T  52182424 gtcaaacatttcgattttaccagaaatcgaatttacctccgaattgacacgatttcagtacctaaaaacgtaaactcgataaactcggcgagttaacact 52182325  T
Q  512 cgatttgcggaacattgctt 531  Q
    ||||||| | |||| |||||    
T  52182324 cgatttgtgaaacagtgctt 52182305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 18798974 - 18798866
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| |||||||| |||     ||||||||||| |||||    
T  18798974 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggta-----ggagagttaacgctcga 18798880  T
Q  515 tttgcggaacattg 528  Q
    | ||||||||||||    
T  18798879 tctgcggaacattg 18798866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 412 - 517
Target Start/End: Complemental strand, 25253591 - 25253486
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    |||||| ||| ||| |||||||||||| || |||||||  |  |||||||||||||||||||||||||| ||||||| |||| ||| |||| ||||||||    
T  25253591 gtcaaatcttccgagtttaccagaaaccgaatttacctcagtattaacacgattttggtacctaaaaacataaactcggtaaactcagagaattaacact 25253492  T
Q  512 cgattt 517  Q
    ||||||    
T  25253491 cgattt 25253486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 412 - 528
Target Start/End: Original strand, 35177233 - 35177350
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagtt-aacac 510  Q
    ||||| |||| |||||||| ||||||  |||||||||| ||| |||||||||||||||||||||||||| |||| |   ||| ||||||| ||| |||||    
T  35177233 gtcaatccttccgattttatcagaaatcgagtttacctctgaattaacacgattttggtacctaaaaacataaatttgataaactcggagtgttaaacac 35177332  T
Q  511 tcgatttgcggaacattg 528  Q
    |||||||||||| |||||    
T  35177333 tcgatttgcggaccattg 35177350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 412 - 528
Target Start/End: Complemental strand, 4005165 - 4005049
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| || |||||||||||||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| ||||     
T  4005165 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacg 4005066  T
Q  512 cgatttgcggaacattg 528  Q
    ||||||| |||||||||    
T  4005065 cgatttgtggaacattg 4005049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 424 - 528
Target Start/End: Original strand, 5209403 - 5209507
Alignment:
Q  424 gattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaa 523  Q
    ||||| ||||||||  ||||| ||||  |||||||||||||||||||||||||| |||||||  |  ||| ||| ||| |||||||||||||||||||||    
T  5209403 gatttcaccagaaatcgagttgacctccgagttaacacgattttggtacctaaacacgtaaaaacgataaactcagagtgttaacactcgatttgcggaa 5209502  T
Q  524 cattg 528  Q
    |||||    
T  5209503 cattg 5209507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 412 - 528
Target Start/End: Complemental strand, 26757713 - 26757597
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| || |||||||||||||||  |||||||||| ||||||||| || |||| | ||||||| |||||||||| |||| ||||  ||||| ||||     
T  26757713 gtcaaactttccgattttaccagaaatcgagtttacctctgagttaactcgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacg 26757614  T
Q  512 cgatttgcggaacattg 528  Q
    ||||||| |||||||||    
T  26757613 cgatttgtggaacattg 26757597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 412 - 517
Target Start/End: Original strand, 27257881 - 27257986
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| || ||||||||||  |||   |||||||||  ||||| |||||||||||||||||||||||||||| ||| ||| ||||| |||||||||||    
T  27257881 gtcaaacattccgattttaccgaaaatcaagtttacctcggagttgacacgattttggtacctaaaaacgtaaattcattaaactcggcgagttaacact 27257980  T
Q  512 cgattt 517  Q
     |||||    
T  27257981 agattt 27257986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 415 - 488
Target Start/End: Complemental strand, 49231529 - 49231456
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||| ||||| |||||||||| ||||||||||  |||||||||||||||| |||||||||||| |||||||    
T  49231529 aaaccttccgattataccagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacataaactc 49231456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 412 - 528
Target Start/End: Original strand, 1243329 - 1243445
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| || |||||||||||||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||  |||| ||||  ||||| ||||     
T  1243329 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactaggtaaactcgccgagttgacacg 1243428  T
Q  512 cgatttgcggaacattg 528  Q
    ||||||| |||||||||    
T  1243429 cgatttgtggaacattg 1243445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 412 - 528
Target Start/End: Complemental strand, 8147415 - 8147299
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| || | |||||||||||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| ||||     
T  8147415 gtcaaactttgcaattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgctgagttgacacg 8147316  T
Q  512 cgatttgcggaacattg 528  Q
    ||||||| |||||||||    
T  8147315 cgatttgtggaacattg 8147299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 424 - 528
Target Start/End: Complemental strand, 9192110 - 9192006
Alignment:
Q  424 gattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaa 523  Q
    ||||||||||||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| |||| ||||||| ||||    
T  9192110 gattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtggaa 9192011  T
Q  524 cattg 528  Q
    |||||    
T  9192010 cattg 9192006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 412 - 528
Target Start/End: Complemental strand, 41353519 - 41353403
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| || |||||||||||||||  ||||||||||  ||||||||||| |||| | ||||||| || ||||||| |||| ||||  ||||| ||||     
T  41353519 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacataaactcggtaaactcgccgagttgacacg 41353420  T
Q  512 cgatttgcggaacattg 528  Q
    ||||||| |||||||||    
T  41353419 cgatttgtggaacattg 41353403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 412 - 528
Target Start/End: Complemental strand, 51106990 - 51106874
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| || |||||||||||||||  |||||| |||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| ||||     
T  51106990 gtcaaactttccgattttaccagaaatcgagttttcctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacg 51106891  T
Q  512 cgatttgcggaacattg 528  Q
    ||||||| |||||||||    
T  51106890 cgatttgtggaacattg 51106874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 463 - 528
Target Start/End: Original strand, 28387141 - 28387206
Alignment:
Q  463 attttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattg 528  Q
    ||||| |||| |||||| |||||||| |||| |||||||||||||||| |||||||||||||||||    
T  28387141 atttttgtacataaaaatgtaaactcggtaatctcggagagttaacacacgatttgcggaacattg 28387206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 412 - 528
Target Start/End: Complemental strand, 3593344 - 3593237
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    |||||||||| ||||||||  |||||  || |||||||  ||||||||||||||||| ||||||||||  |||||||         ||||||||||||||    
T  3593344 gtcaaaccttccgattttattagaaatcgaatttacctccgagttaacacgattttgatacctaaaaatataaactc---------ggagagttaacact 3593254  T
Q  512 cgatttgcggaacattg 528  Q
    |||||||||||||||||    
T  3593253 cgatttgcggaacattg 3593237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 404 - 488
Target Start/End: Complemental strand, 18954571 - 18954487
Alignment:
Q  404 ttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||||||||||| || |||||| |||| |||| |||||||| |  ||||||||||| |||||  ||||||||||||||||||    
T  18954571 ttaactcggtcaaactttccgatttcaccaaaaaccgagtttacgtccgagttaacacgtttttgccacctaaaaacgtaaactc 18954487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 488
Target Start/End: Complemental strand, 7798598 - 7798522
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||| || |||||| |||| |||| ||||||||||  ||||||||||| |||||  ||||||||||||||||||    
T  7798598 gtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactc 7798522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 490
Target Start/End: Complemental strand, 1108450 - 1108372
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcag 490  Q
    ||||||| || |||||| |||| |||| ||||||||||  ||||| ||||| ||||   ||||||||||||||||||||    
T  1108450 gtcaaactttccgatttcaccaaaaaccgagtttacctccgagtttacacgtttttaccacctaaaaacgtaaactcag 1108372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 33886883 - 33886953
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgt 482  Q
    ||||||| || |||||| |||| |||| ||||||||||  ||||||||||| |||||  ||||||||||||    
T  33886883 gtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgt 33886953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 33957367 - 33957297
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgt 482  Q
    ||||||| || |||||| |||| |||| ||||||||||  ||||||||||| |||||  ||||||||||||    
T  33957367 gtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgt 33957297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 424 - 488
Target Start/End: Original strand, 2293411 - 2293475
Alignment:
Q  424 gattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||| || ||| ||||| |||||  ||||| |||||||||||| |||||| |||||||||||    
T  2293411 gattttatcaaaaaatgagtctaccttcgagtttacacgattttggcacctaacaacgtaaactc 2293475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 404 - 488
Target Start/End: Complemental strand, 8122294 - 8122211
Alignment:
Q  404 ttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||||||||| | |||| ||||||||| |||  |||||||  |  ||||| ||||||||||||||  |||||||||||||||    
T  8122294 ttaactcggtcaa-cttttcaattttaccaaaaaacgagtttaagttcgagtttacacgattttggtatttaaaaacgtaaactc 8122211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 488
Target Start/End: Original strand, 11579123 - 11579199
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||| || |||||||||||||||   | |||||||  ||||||||||| |||| | ||||||| ||||||||||    
T  11579123 gtcaaactttccgattttaccagaaatcaaatttacctccgagttaacacgtttttagcacctaaacacgtaaactc 11579199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 415 - 475
Target Start/End: Original strand, 42304526 - 42304586
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtaccta 475  Q
    ||||||| | |||||||||||||| ||||||||||  || |||||| |||||||| |||||    
T  42304526 aaaccttccaattttaccagaaaccgagtttacctccgaattaacatgattttggcaccta 42304586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 2e-38; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 49501211 - 49501324
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| |||||||||||||||| ||||||||||  |||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  49501211 aaaccttccgattttaccagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcga 49501310  T
Q  515 tttgcggaacattg 528  Q
    ||||| ||||||||    
T  49501311 tttgcagaacattg 49501324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 49507276 - 49507389
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| |||||||||||||||| ||||||||||  |||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  49507276 aaaccttccgattttaccagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcga 49507375  T
Q  515 tttgcggaacattg 528  Q
    ||||| ||||||||    
T  49507376 tttgcagaacattg 49507389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 412 - 534
Target Start/End: Complemental strand, 32889973 - 32889851
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||||||  |||||||||||||| ||||||||| |   ||||||||||||||||||||||||| |||||||||| ||||  ||||||||||||||||    
T  32889973 gtcaaaccttctgattttaccagaaattgagtttacatcaaagttaacacgattttggtacctaaacacgtaaactcggtaaattcggagagttaacact 32889874  T
Q  512 cgatttgcggaacattgctttga 534  Q
    |||||||||||||||||||||||    
T  32889873 cgatttgcggaacattgctttga 32889851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 418 - 528
Target Start/End: Complemental strand, 32322586 - 32322476
Alignment:
Q  418 cctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgattt 517  Q
    |||| |||||||||||||||| ||||||||||  || ||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||| ||    
T  32322586 ccttccgattttaccagaaaccgagtttacctcagaattaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgactt 32322487  T
Q  518 gcggaacattg 528  Q
    |||||||||||    
T  32322486 gcggaacattg 32322476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 412 - 528
Target Start/End: Original strand, 29510092 - 29510208
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||||||  |||||||||||||| ||||||||| |  ||||||||||||||||| |||||||| ||||||||||  ||| |||||||||||||||||    
T  29510092 gtcaaaccttctgattttaccagaaattgagtttacatcagagttaacacgattttgatacctaaacacgtaaactcgataaactcggagagttaacact 29510191  T
Q  512 cgatttgcggaacattg 528  Q
    |||||||||||||||||    
T  29510192 cgatttgcggaacattg 29510208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 30967021 - 30967134
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | ||||||||||||||  | |||| ||  |||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  30967021 aaaccttccaattttaccagaaaccaattttatctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcga 30967120  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  30967121 tttgcggaacattg 30967134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 5800487 - 5800374
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    |||||||  ||| ||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| ||||||||||||||||||||    
T  5800487 aaaccttctgatgttaccagaaaccgaatttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagagttaacactcga 5800388  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  5800387 tttgcggaacattg 5800374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 23987719 - 23987607
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | ||||||||||||||  | |||||||  |||||||||||||||| |||||||||||||||||||| |||| ||||||||| ||||||||||    
T  23987719 aaaccttccaattttaccagaaaccaa-tttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagaggtaacactcga 23987621  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  23987620 tttgcggaacattg 23987607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 27768587 - 27768474
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| |||||||| |||||||||||    
T  27768587 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 27768488  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  27768487 tttgcggaacattg 27768474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 527
Target Start/End: Complemental strand, 28484419 - 28484306
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacga-ttttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcg 513  Q
    ||||||| | |||||||||||||| ||||||||||  |||||||||||| |||| |||||||||||||||||||| |||| ||| ||||||||||||||     
T  28484419 aaaccttccaattttaccagaaaccgagtttacctcagagttaacacgactttttgtacctaaaaacgtaaactcggtaatctcagagagttaacactca 28484320  T
Q  514 atttgcggaacatt 527  Q
    ||||||||||||||    
T  28484319 atttgcggaacatt 28484306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 41725636 - 41725523
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| |||||||||||||||  ||||||||||  |||||||||||||||| |||||||||||||||||||  |||| | ||||||||||||||||||    
T  41725636 aaaccttccgattttaccagaaatcgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactaggtaatcacggagagttaacactcga 41725537  T
Q  515 tttgcggaacattg 528  Q
    ||||  ||||||||    
T  41725536 tttgaagaacattg 41725523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 49834512 - 49834625
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| |||||||||||||||| ||||||||||  |||||||||||||||| ||| |||||||||||||||| |||| ||  |||||||||||||| |    
T  49834512 aaaccttccgattttaccagaaaccgagtttacctcagagttaacacgatttttgtagctaaaaacgtaaactcggtaatcttagagagttaacactcaa 49834611  T
Q  515 tttgcggaacattg 528  Q
    ||| ||||||||||    
T  49834612 tttacggaacattg 49834625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 50018715 - 50018602
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  ||||||||| |||||| ||||||||||| |||||||| |||| ||||||||||||||||||||    
T  50018715 aaaccttccaattttaccagaaaccgattttacctcagagttaacatgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcga 50018616  T
Q  515 tttgcggaacattg 528  Q
    ||||| ||||||||    
T  50018615 tttgcagaacattg 50018602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 54341665 - 54341552
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||||| |||||||||||||| || |||||||  ||||| |||||||||| ||||||||||| ||||||||  ||| |||||||| |||||||||||    
T  54341665 aaacctttcaattttaccagaaaccgattttacctcagagtttacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 54341566  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  54341565 tttgcggaacattg 54341552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 404 - 527
Target Start/End: Complemental strand, 33138885 - 33138771
Alignment:
Q  404 ttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagag 503  Q
    ||||||| |||||||||| |||||||||||||||  ||||||||||  |||||||||||||||||||||||||| |||||||         |||||||||    
T  33138885 ttaactcagtcaaaccttccgattttaccagaaatcgagtttacctccgagttaacacgattttggtacctaaacacgtaaa---------ctcggagag 33138795  T
Q  504 ttaacactcgatttgcggaacatt 527  Q
    ||||||||||||||||||||||||    
T  33138794 ttaacactcgatttgcggaacatt 33138771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 48261601 - 48261488
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| || |||||  ||| |||||||| |||||||||||    
T  48261601 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtcaactcgataatctcggagatttaacactcga 48261502  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  48261501 tttgcggaacattg 48261488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 51321379 - 51321266
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || ||||| |  |||||||||||||||| ||||||||||| ||||||||  |||  |||||||||||||||||||    
T  51321379 aaaccttccaattttaccagaaaccgattttacgtcagagttaacacgatttttgtacctaaaaatgtaaactcgataatatcggagagttaacactcga 51321280  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  51321279 tttgcggaacattg 51321266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 412 - 528
Target Start/End: Original strand, 23671400 - 23671516
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| ||||||||| ||||||||  ||||||||||  |||||||||||||||||||||||||| |||||||  | |||| ||| ||| | |||||||    
T  23671400 gtcaaacttttcgatttcaccagaaatcgagtttacctccgagttaacacgattttggtacctaaacacgtaaaaccggtaaactcagagtgctaacact 23671499  T
Q  512 cgatttgcggaacattg 528  Q
    |||||||||||||||||    
T  23671500 cgatttgcggaacattg 23671516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 5441925 - 5441812
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| |||||||| |||||| ||||    
T  5441925 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacattcga 5441826  T
Q  515 tttgcggaacattg 528  Q
    ||| ||||||||||    
T  5441825 tttacggaacattg 5441812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 29856039 - 29855926
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||  ||||||||||  |||||||||||||||| |||| ||||||||||||||| |||| |||||||| |||| ||||||    
T  29856039 aaaccttccaattttaccagaaatcgagtttacctcagagttaacacgatttttgtacataaaaacgtaaactcggtaatctcggagaattaatactcga 29855940  T
Q  515 tttgcggaacattg 528  Q
    |||  |||||||||    
T  29855939 tttatggaacattg 29855926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 37828108 - 37828221
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||| ||||||| ||||||||  ||| |||||||| |||||| ||||    
T  37828108 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtatctaaaaatgtaaactcgataatctcggagatttaacattcga 37828207  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  37828208 tttgcggaacattg 37828221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 425 - 528
Target Start/End: Original strand, 54853164 - 54853267
Alignment:
Q  425 attttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaac 524  Q
    ||||||| |||||| || |||||||  |||||||||| ||||| |||| |||||| |||||||| |||| |||||||||||||||||||||||| |||||    
T  54853164 attttacgagaaaccgattttacctcagagttaacacaatttttgtacataaaaaggtaaactcggtaatctcggagagttaacactcgatttgtggaac 54853263  T
Q  525 attg 528  Q
    ||||    
T  54853264 attg 54853267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 412 - 517
Target Start/End: Complemental strand, 871886 - 871782
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| || |||||||||||||||  ||||||||||  ||||| ||||||||| ||||||||||||||||||||| |||| ||||  |||||||||||    
T  871886 gtcaaacattccgattttaccagaaatcgagtttacctccgagttgacacgattt-ggtacctaaaaacgtaaactcggtaaactcgacgagttaacact 871788  T
Q  512 cgattt 517  Q
    ||||||    
T  871787 cgattt 871782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 412 - 529
Target Start/End: Complemental strand, 46286786 - 46286678
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    |||||||||| ||| ||||| |||||  ||||||||||  | ||||||||||||||||||||||||||||||||         |||||||||||||||||    
T  46286786 gtcaaaccttccgagtttactagaaatcgagtttaccttagtgttaacacgattttggtacctaaaaacgtaaa---------ctcggagagttaacact 46286696  T
Q  512 cgatttgcggaacattgc 529  Q
    ||||||||||||||||||    
T  46286695 cgatttgcggaacattgc 46286678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 412 - 528
Target Start/End: Complemental strand, 50517270 - 50517163
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    |||||||||| | |||||||||||||  ||||||||||   ||||||||||||||||||||||||| |||||||         |||||||||||||||||    
T  50517270 gtcaaaccttccaattttaccagaaatcgagtttacctcaaagttaacacgattttggtacctaaacacgtaaa---------ctcggagagttaacact 50517180  T
Q  512 cgatttgcggaacattg 528  Q
    |||||||||||||||||    
T  50517179 cgatttgcggaacattg 50517163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 424 - 528
Target Start/End: Complemental strand, 55165590 - 55165486
Alignment:
Q  424 gattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaa 523  Q
    |||||||||| |||   |||||||||   |||||| ||||||||||||| |||||||||||||||||||| ||||  |||||| ||||||||||| ||||    
T  55165590 gattttaccataaatcaagtttacctccaagttaatacgattttggtacgtaaaaacgtaaactcagtaaactcgacgagttagcactcgatttgtggaa 55165491  T
Q  524 cattg 528  Q
    |||||    
T  55165490 cattg 55165486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 412 - 490
Target Start/End: Original strand, 26491149 - 26491227
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcag 490  Q
    ||||||||||  ||||||||||||||| ||||||||||   | ||||||||||||||||||||||| ||||||||||||    
T  26491149 gtcaaaccttctgattttaccagaaaccgagtttacctcaaatttaacacgattttggtacctaaacacgtaaactcag 26491227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 455 - 528
Target Start/End: Original strand, 32683746 - 32683818
Alignment:
Q  455 ttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattg 528  Q
    ||||||||||||| |||||||||||||||| ||| |||| ||| |||||||||||||||||||| |||||||||    
T  32683746 ttaacacgatttttgtacctaaaaacgtaa-ctcggtaatctctgagagttaacactcgatttgtggaacattg 32683818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 452 - 528
Target Start/End: Complemental strand, 37916287 - 37916211
Alignment:
Q  452 gagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattg 528  Q
    |||||||||| ||||| |||| |||||| ||||||||  ||| |||||||||||||||||| |||||||||||||||    
T  37916287 gagttaacacaatttttgtacataaaaatgtaaactcgataatctcggagagttaacactcaatttgcggaacattg 37916211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 412 - 531
Target Start/End: Complemental strand, 29469240 - 29469121
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| || |||||||||||||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  || || ||||     
T  29469240 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgaattgacacg 29469141  T
Q  512 cgatttgcggaacattgctt 531  Q
    ||||||| | ||||||||||    
T  29469140 cgatttgtgaaacattgctt 29469121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 414 - 527
Target Start/End: Original strand, 24966547 - 24966651
Alignment:
Q  414 caaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcg 513  Q
    |||||||| | ||||||||| |||| || ||||| |  |||||||||||||||||||||||||| |||||||         |||||||||||||||||||    
T  24966547 caaaccttcccattttaccaaaaaccgaatttacttccgagttaacacgattttggtacctaaacacgtaaa---------ctcggagagttaacactcg 24966637  T
Q  514 atttgcggaacatt 527  Q
    ||||||| ||||||    
T  24966638 atttgcgaaacatt 24966651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 412 - 528
Target Start/End: Complemental strand, 8084286 - 8084170
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| || ||||||||| |||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| ||||     
T  8084286 gtcaaactttccgattttactagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacg 8084187  T
Q  512 cgatttgcggaacattg 528  Q
    || |||| |||||||||    
T  8084186 cggtttgtggaacattg 8084170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 412 - 488
Target Start/End: Complemental strand, 51967354 - 51967278
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||| ||||||||| |||| |||| ||||||||||  ||||||||||| |||||  ||||||||||||||||||    
T  51967354 gtcaaacttttcgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactc 51967278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 412 - 489
Target Start/End: Original strand, 42937437 - 42937514
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactca 489  Q
    ||||||| ||||||||||||||||||  ||||||||||  ||||||| ||| |||| | ||||||| |||||||||||    
T  42937437 gtcaaacttttcgattttaccagaaatcgagtttacctccgagttaaaacgcttttagcacctaaatacgtaaactca 42937514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 484
Target Start/End: Original strand, 41470344 - 41470424
Alignment:
Q  404 ttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaa 484  Q
    ||||||||||||||| || | |||| |||| |||| ||||||||||  ||||||||||| |||||  ||||||||||||||    
T  41470344 ttaactcggtcaaactttccaatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaa 41470424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 488
Target Start/End: Original strand, 46862941 - 46863017
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||||||||||||||||||||||  || ||||| |   ||||||||| ||||| ||||||||| ||||||||||    
T  46862941 gtcaaacctttcgattttaccagaaatcgaatttacttcatagttaacacaattttagtacctaaacacgtaaactc 46863017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 488
Target Start/End: Original strand, 6487344 - 6487420
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||| || |||||| |||| |||  ||||||||||  ||||||||||| |||||  ||||||||||||||||||    
T  6487344 gtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactc 6487420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 430 - 490
Target Start/End: Original strand, 40487703 - 40487763
Alignment:
Q  430 accagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcag 490  Q
    |||| |||| ||||||||||  ||||||||||| |||||  ||||||||||||||||||||    
T  40487703 accaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactcag 40487763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 488
Target Start/End: Original strand, 56424002 - 56424077
Alignment:
Q  413 tcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    |||||| || |||||| || | |||| ||||||||||  ||||||||||| |||||  ||||||||||||||||||    
T  56424002 tcaaactttccgatttcactaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactc 56424077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 404 - 490
Target Start/End: Original strand, 2326680 - 2326765
Alignment:
Q  404 ttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcag 490  Q
    ||||||||||||| | |||| ||||||| |||||   ||||||| |   |||| |||||||||||||||||||||||||||| ||||    
T  2326680 ttaactcggtcaa-cttttcaattttactagaaaacaagtttacatccaagtttacacgattttggtacctaaaaacgtaaattcag 2326765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 527
Target Start/End: Complemental strand, 12754526 - 12754489
Alignment:
Q  490 gtaagctcggagagttaacactcgatttgcggaacatt 527  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  12754526 gtaaactcggcgagttaacactcgatttgcggaacatt 12754489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 12754592 - 12754539
Alignment:
Q  393 tttatcgagttttaactcggtcaaacctttcgattttaccagaaactgagttta 446  Q
    |||| ||||| ||||||||||||||| ||  ||||||||||||||| |||||||    
T  12754592 tttaccgagtgttaactcggtcaaactttctgattttaccagaaacagagttta 12754539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 488
Target Start/End: Complemental strand, 14334460 - 14334395
Alignment:
Q  423 cgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||||||| |||   ||||||| |  ||||| || ||||||||||||||||||||||||||||    
T  14334460 cgattttaccaaaaaacaagtttacgtccgagtttacgcgattttggtacctaaaaacgtaaactc 14334395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 81; Significance: 8e-38; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 412 - 520
Target Start/End: Original strand, 39311 - 39419
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||||||||||||||||||||||| ||||| ||||  | ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  39311 gtcaaacctttcgattttaccagaaaccgagttgacctcagggttaacacgattttggtacctaaaaacgtaaactcggtaatctcggagagttaacact 39410  T
Q  512 cgatttgcg 520  Q
    |||||||||    
T  39411 cgatttgcg 39419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 413 - 531
Target Start/End: Original strand, 929 - 1047
Alignment:
Q  413 tcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactc 512  Q
    |||||| || |||||||||||||||| ||||||||||  |||||||||||||||||||||||||| |||||||||| |||| ||| ||| ||||||||||    
T  929 tcaaactttccgattttaccagaaaccgagtttacctccgagttaacacgattttggtacctaaacacgtaaactcggtaaactcagagtgttaacactc 1028  T
Q  513 gatttgcggaacattgctt 531  Q
    |||||||||||||||||||    
T  1029 gatttgcggaacattgctt 1047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 78; Significance: 5e-36; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 57743 - 57856
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    |||||||  |||||||| |||||| ||||||||||  |||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  57743 aaaccttctgattttactagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcga 57842  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  57843 tttgcggaacattg 57856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 5e-36; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 52810879 - 52810766
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| |||||||||||||| | ||||||||||  |||||||||| ||||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  52810879 aaaccttccgattttaccagaacccgagtttacctcagagttaacacaatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcga 52810780  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  52810779 tttgcggaacattg 52810766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 20833418 - 20833310
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| |||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||  ||| ||| ||||||||||||||||    
T  20833418 aaaccttccgattttaccagaaactgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgataatctcagagagttaacactcga 20833319  T
Q  515 tttgcggaa 523  Q
    |||||||||    
T  20833318 tttgcggaa 20833310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 412 - 528
Target Start/End: Original strand, 21386508 - 21386624
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| ||||||||||||||||||  |||||||||| | |||||||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  21386508 gtcaaacttttcgattttaccagaaatcgagtttacctctaagttaacacgattttgatacctaaaaatgtaaactcggtaaactcggagagttaacact 21386607  T
Q  512 cgatttgcggaacattg 528  Q
    ||||||| |||||||||    
T  21386608 cgatttggggaacattg 21386624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 374 - 528
Target Start/End: Complemental strand, 48379721 - 48379558
Alignment:
Q  374 tcggtcaattttacacgaatttatcgagttttaactcggtcaaac---------ctttcgattttaccagaaactgagtttacctatgagttaacacgat 464  Q
    |||||||| ||||||||| |||| ||||| ||||||| |||||||         ||| |||||||||||||||  ||||||||||  || ||||||||||    
T  48379721 tcggtcaagtttacacgagtttaccgagtgttaactcagtcaaactcgttaagccttccgattttaccagaaatcgagtttacctcagaattaacacgat 48379622  T
Q  465 tttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattg 528  Q
    ||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  48379621 ttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgcggaacattg 48379558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 37455368 - 37455255
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| |||||||||||||||| ||| |||| ||||||||||||||||||||    
T  37455368 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaagctcggtaatctcggagagttaacactcga 37455269  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  37455268 tttgcggaacattg 37455255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 52617651 - 52617764
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| |||||||||||||||| ||||||||||  |||||||||||||||| ||||||||||||||||| ||  ||| ||| ||||||||||||||||    
T  52617651 aaaccttccgattttaccagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaattcgataatctcagagagttaacactcga 52617750  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  52617751 tttgcggaacattg 52617764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 415 - 526
Target Start/End: Complemental strand, 17946749 - 17946638
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| |||||||||||||||| ||||||||||  ||||||||| |||||| ||||||||||||||||||||  ||| |||||||| |||||||||||    
T  17946749 aaaccttccgattttaccagaaaccgagtttacctcagagttaacatgatttttgtacctaaaaacgtaaactcgataatctcggagaattaacactcga 17946650  T
Q  515 tttgcggaacat 526  Q
    ||||||||||||    
T  17946649 tttgcggaacat 17946638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 425 - 528
Target Start/End: Complemental strand, 18750154 - 18750051
Alignment:
Q  425 attttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaac 524  Q
    |||||||||||||| ||||||||||  ||||||||| |||||| |||||||||||||||||||||||||  || ||||||||||||||||||||||||||    
T  18750154 attttaccagaaaccgagtttacctcagagttaacatgatttttgtacctaaaaacgtaaactcagtaatatcagagagttaacactcgatttgcggaac 18750055  T
Q  525 attg 528  Q
    ||||    
T  18750054 attg 18750051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 417 - 527
Target Start/End: Original strand, 7437600 - 7437710
Alignment:
Q  417 acctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatt 516  Q
    ||||| ||||||||||| |||| ||||||| ||  | |||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||    
T  7437600 accttccgattttaccaaaaaccgagtttatctccgtgttaacacgattttggtacctaaacaagtaaactcagtaaactcggagagttaacactcgatt 7437699  T
Q  517 tgcggaacatt 527  Q
    |||||||||||    
T  7437700 tgcggaacatt 7437710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 31645940 - 31646053
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| |||||||||||||||| ||| |||| ||||||||||||||||||||    
T  31645940 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaagctcggtaatctcggagagttaacactcga 31646039  T
Q  515 tttgcggaacattg 528  Q
    |||||| |||||||    
T  31646040 tttgcgaaacattg 31646053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 51737366 - 51737479
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| ||||||||| |||||| ||||||||||  |||||||||||||||| ||||||||||| ||||||||  ||| ||| ||||||||||||||||    
T  51737366 aaaccttccgattttactagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcagagagttaacactcga 51737465  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  51737466 tttgcggaacattg 51737479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 54629372 - 54629259
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    |||||||||| ||||| ||||||  ||||||||||  |||||||||||||||| |||||||||||||||||||| |||| ||| |||||||||||||| |    
T  54629372 aaacctttcgcttttatcagaaatcgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcagagagttaacactcaa 54629273  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  54629272 tttgcggaacattg 54629259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 424 - 528
Target Start/End: Original strand, 44905543 - 44905647
Alignment:
Q  424 gattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaa 523  Q
    ||||||||||||||| ||| ||||||  || ||||||||||||| |||||||| ||||||||||| |||| |||||||||||||||||||||||||||||    
T  44905543 gattttaccagaaaccgagattacctcagaattaacacgatttttgtacctaagaacgtaaactcggtaatctcggagagttaacactcgatttgcggaa 44905642  T
Q  524 cattg 528  Q
    |||||    
T  44905643 cattg 44905647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 23753068 - 23753181
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | ||||||||| |||| || |||||||  |||||||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||    
T  23753068 aaaccttccaattttaccaaaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcga 23753167  T
Q  515 tttgcggaacattg 528  Q
    |||||| |||||||    
T  23753168 tttgcgaaacattg 23753181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 26107850 - 26107737
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| ||||| |||||||||  ||||||||||  ||||||||| |||||| ||||||||||||||||||||  ||| |||||||||||| |||||||    
T  26107850 aaaccttccgattgtaccagaaatcgagtttacctcagagttaacatgatttttgtacctaaaaacgtaaactcgttaatctcggagagttatcactcga 26107751  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  26107750 tttgcggaacattg 26107737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 39038611 - 39038498
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| |||||||||||||||| ||||||||||  |||||||||| ||||| ||||||||||||||||| ||  ||| ||| ||||||||||||||||    
T  39038611 aaaccttccgattttaccagaaaccgagtttacctcagagttaacaccatttttgtacctaaaaacgtaaattcgataatctcagagagttaacactcga 39038512  T
Q  515 tttgcggaacattg 528  Q
    |||| |||||||||    
T  39038511 tttgtggaacattg 39038498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 345 - 519
Target Start/End: Complemental strand, 33693409 - 33693226
Alignment:
Q  345 ttatatttttagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttttaactcggtcaaac---------ctttcgattttaccaga 435  Q
    |||| ||||||||||||||| ||||||| |||||| | ||||||||| |||| ||||| |||||||||||||||         |||  ||||||||||||    
T  33693409 ttatctttttagatgtaaacacgtaaaactcggtcgagtttacacgagtttaccgagtgttaactcggtcaaactcgtcaaaccttctgattttaccaga 33693310  T
Q  436 aactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgc 519  Q
    ||  ||||||||||   |||||||||||||||||||  ||||| | ||||||| |||| ||||||||||||||| |||||||||    
T  33693309 aatcgagtttacctccaagttaacacgattttggtatgtaaaatcataaactcggtaaactcggagagttaacattcgatttgc 33693226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 40897652 - 40897539
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||| ||||||| || |||||||  |||||||||||||||| |||||||||| |||||| || |||| ||||||||||||||||||||    
T  40897652 aaaccttccaattttatcagaaaccgattttacctcagagttaacacgatttttgtacctaaaatcgtaaattcggtaatctcggagagttaacactcga 40897553  T
Q  515 tttgcggaacattg 528  Q
    | ||||||||||||    
T  40897552 tctgcggaacattg 40897539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 443 - 528
Target Start/End: Original strand, 50761807 - 50761892
Alignment:
Q  443 tttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattg 528  Q
    |||||||  |||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||    
T  50761807 tttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgctgaacattg 50761892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 50902988 - 50903101
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| ||||||||||  |||||||||||||||| |||| |||||||||||||||  ||  ||||||||||||||||||||    
T  50902988 aaaccttccaattttaccagaaaccgagtttacctcagagttaacacgatttttgtacataaaaacgtaaactcgatattctcggagagttaacactcga 50903087  T
Q  515 tttgcggaacattg 528  Q
     ||||| |||||||    
T  50903088 cttgcgaaacattg 50903101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 344 - 485
Target Start/End: Complemental strand, 16155318 - 16155168
Alignment:
Q  344 attatatttttagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttttaactcggtcaaac---------ctttcgattttaccag 434  Q
    ||||| ||||||||||||||||||||||| |||||| | ||||||||| ||||  |||| |||||||||||||||         ||| | |||||| ||     
T  16155318 attatttttttagatgtaaactcgtaaaactcggtcgagtttacacgagtttactgagtgttaactcggtcaaactcgtcaaaccttccaattttatcaa 16155219  T
Q  435 aaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaa 485  Q
    |||| ||||||||||  ||||||||||||||||||||||||||||||||||    
T  16155218 aaaccgagtttacctcagagttaacacgattttggtacctaaaaacgtaaa 16155168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 413 - 527
Target Start/End: Complemental strand, 43173003 - 43172889
Alignment:
Q  413 tcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactc 512  Q
    |||||||||||||||||||||||||  ||||||||||  |||| ||||||||||||||||||||| || |||||||  ||| ||   |||||||||| ||    
T  43173003 tcaaacctttcgattttaccagaaatcgagtttacctccgagtcaacacgattttggtacctaaacacataaactcgataaacttaaagagttaacattc 43172904  T
Q  513 gatttgcggaacatt 527  Q
    |||||||||||||||    
T  43172903 gatttgcggaacatt 43172889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 412 - 529
Target Start/End: Original strand, 4962755 - 4962872
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||||||||||||||||  ||||  ||||||||||   |||||||||||||||| |||||||||||||||||||  ||| ||  |||||||||| ||    
T  4962755 gtcaaacctttcgattttacttgaaatcgagtttacctccaagttaacacgattttgatacctaaaaacgtaaactcgataaacttagagagttaacgct 4962854  T
Q  512 cgatttgcggaacattgc 529  Q
    | ||||||||||||||||    
T  4962855 caatttgcggaacattgc 4962872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 423 - 528
Target Start/End: Complemental strand, 7665657 - 7665552
Alignment:
Q  423 cgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcgga 522  Q
    ||||||||||| |||  ||||||||||  |||||||||||||||||||| |||||||||||||||  ||||  |||| |||||||||||||||||| |||    
T  7665657 cgattttaccaaaaatcgagtttacctccgagttaacacgattttggtagctaaaaacgtaaactaggtaaattcggcgagttaacactcgatttgtgga 7665558  T
Q  523 acattg 528  Q
    ||||||    
T  7665557 acattg 7665552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 412 - 516
Target Start/End: Original strand, 45602441 - 45602545
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| |||||||||||||||||| |||||||||||| ||||| |||| |||||  |||| ||||||||||| || |||| ||||| |||||||||||    
T  45602441 gtcaaacatttcgattttaccagaaattgagtttacctacgagttgacacaattttaatacccaaaaacgtaaattcggtaaactcggcgagttaacact 45602540  T
Q  512 cgatt 516  Q
    |||||    
T  45602541 cgatt 45602545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 452 - 528
Target Start/End: Complemental strand, 45863307 - 45863231
Alignment:
Q  452 gagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattg 528  Q
    |||||||||||||||| ||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||||||    
T  45863307 gagttaacacgatttttgtacctaaaaacgtaaactctttaatctcagagagttaacactcgatttgcggaacattg 45863231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 36673831 - 36673944
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| |||| |||||| || |||||  ||| |||||||| |||||||||||    
T  36673831 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacttaaaaatgtcaactcgataatctcggagatttaacactcga 36673930  T
Q  515 tttgcggaacattg 528  Q
    ||||| ||||||||    
T  36673931 tttgcagaacattg 36673944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 412 - 528
Target Start/End: Complemental strand, 49296193 - 49296077
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| ||||||||||||||||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| ||||     
T  49296193 gtcaaacttttcgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacg 49296094  T
Q  512 cgatttgcggaacattg 528  Q
    ||||||| |||||||||    
T  49296093 cgatttgtggaacattg 49296077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 412 - 528
Target Start/End: Complemental strand, 8598736 - 8598620
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| || |||||||||||||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| ||||     
T  8598736 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacg 8598637  T
Q  512 cgatttgcggaacattg 528  Q
    ||||||| |||||||||    
T  8598636 cgatttgtggaacattg 8598620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 427 - 527
Target Start/End: Original strand, 21718452 - 21718552
Alignment:
Q  427 tttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacat 526  Q
    ||||| |||||  ||||||| || |||||| |||||||||||||| || ||||||||||||||||||  |||  |||||||||||||||||  |||||||    
T  21718452 tttactagaaatcgagtttatctttgagttgacacgattttggtatcttaaaacgtaaactcagtaaaatcgacgagttaacactcgatttttggaacat 21718551  T
Q  527 t 527  Q
    |    
T  21718552 t 21718552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 413 - 488
Target Start/End: Complemental strand, 25049947 - 25049872
Alignment:
Q  413 tcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    |||||| || ||||||||| |||||  ||||||||||  ||||| |||||||||||||||||||||||||||||||    
T  25049947 tcaaacattccgattttactagaaatcgagtttacctccgagttgacacgattttggtacctaaaaacgtaaactc 25049872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 352 - 488
Target Start/End: Complemental strand, 49458504 - 49458359
Alignment:
Q  352 tttagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttttaactcggtcaaac---------ctttcgattttaccagaaactgag 442  Q
    ||||||||||||||||||||| |||||| | ||||||||| ||||  |||| |||| | ||||||||         ||| |||||||||||||||  |||    
T  49458504 tttagatgtaaactcgtaaaactcggtcgagtttacacgagtttactgagtgttaatttggtcaaactcgtcaaaccttccgattttaccagaaatcgag 49458405  T
Q  443 tttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||| |  |||||||||| |||||| |||||||| ||||||||||    
T  49458404 tttacttcagagttaacacaattttgatacctaaacacgtaaactc 49458359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 412 - 528
Target Start/End: Complemental strand, 42736384 - 42736268
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| ||| |||||||||||||||| |||||| ||    |||||||||||||||||| ||||||||| ||||||  ||| ||||   | ||||||||    
T  42736384 gtcaaactttttgattttaccagaaactaagtttatctcaatgttaacacgattttggtatctaaaaacgcaaactcgataaactcgacaaattaacact 42736285  T
Q  512 cgatttgcggaacattg 528  Q
     ||||| ||||||||||    
T  42736284 tgatttacggaacattg 42736268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 415 - 488
Target Start/End: Original strand, 22489511 - 22489584
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||| |||||||||||||||  |||||||| | ||| |||||||| |||||| ||||||| ||||||||||    
T  22489511 aaaccttccgattttaccagaaatcgagtttacatctgatttaacacgtttttggcacctaaacacgtaaactc 22489584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 528
Target Start/End: Complemental strand, 53836039 - 53835923
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| || |||||||||||||||   |||||||||   |||||||||| |||| | ||||||| |||||||||| |||| ||||  || || ||||     
T  53836039 gtcaaactttccgattttaccagaaatcaagtttacctccaagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgaattgacacg 53835940  T
Q  512 cgatttgcggaacattg 528  Q
    ||||||| |||||||||    
T  53835939 cgatttgtggaacattg 53835923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 490
Target Start/End: Original strand, 53645337 - 53645415
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcag 490  Q
    ||||||| || |||||| |||| ||||||||||||||| |||||| | ||| |||||  |||||||||||| |||||||    
T  53645337 gtcaaactttccgatttcaccaaaaactgagtttacctctgagtttatacgtttttgccacctaaaaacgttaactcag 53645415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 488
Target Start/End: Original strand, 9818588 - 9818664
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||| || |||||| |||| |||  ||||||||||  ||||||||||| |||||  ||||||||||||||||||    
T  9818588 gtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactc 9818664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 488
Target Start/End: Complemental strand, 40064355 - 40064279
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||| ||||||||| |||| ||||| | |||||||   |||| ||||| |||||  ||||||||||||||||||    
T  40064355 gtcaaacttttcgatttcaccaaaaactaaatttacctccaagtttacacgtttttgccacctaaaaacgtaaactc 40064279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 2e-35; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 424 - 528
Target Start/End: Original strand, 214945 - 215049
Alignment:
Q  424 gattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaa 523  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| || |||| |||||| ||||||||||| ||||||||||    
T  214945 gattttaccagaaactgagtttaccttagagttaacacgattttggtacctaaaaacgtaaattcggtaatctcggaaagttaacactcaatttgcggaa 215044  T
Q  524 cattg 528  Q
    |||||    
T  215045 cattg 215049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 6224256 - 6224369
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| ||||||||| |||||| ||||| ||||| |||||||||||||||  ||||||||||||||||||||  ||| ||||||||||||||||||||    
T  6224256 aaaccttccgattttactagaaaccgagttcacctaagagttaacacgatttgtgtacctaaaaacgtaaactcgataatctcggagagttaacactcga 6224355  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  6224356 tttgcggaacattg 6224369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 412 - 529
Target Start/End: Complemental strand, 15224307 - 15224190
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| ||||||||| ||||||||  |||||||||| ||||||||||||||||||||||||||| ||||||| |  |||| ||||||| |||||||||    
T  15224307 gtcaaacttttcgatttcaccagaaatcgagtttacctctgagttaacacgattttggtacctaaacacgtaaaattggtaaactcggagtgttaacact 15224208  T
Q  512 cgatttgcggaacattgc 529  Q
    ||||||||||||||||||    
T  15224207 cgatttgcggaacattgc 15224190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 28739973 - 28740086
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| |||||||||||| ||||||| |||| ||||||||||||||||||||    
T  28739973 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacataaactcggtaatctcggagagttaacactcga 28740072  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  28740073 tttgcggaacattg 28740086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 7027426 - 7027313
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||||| |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| |||||||| |||||||||||    
T  7027426 aaacctttcaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 7027327  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  7027326 tttgcggaacattg 7027313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 25288686 - 25288573
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| ||||||||| |||||| ||||||||||  |||||||||||||||| ||||||||||| |||||||| |||| ||||||||||||| | ||||    
T  25288686 aaaccttccgattttactagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaatattcga 25288587  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  25288586 tttgcggaacattg 25288573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 412 - 528
Target Start/End: Complemental strand, 34342315 - 34342199
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    |||||||||| ||| |||||||||||| ||||||||||  | | ||||| |  |||||||||||||||||||||||| |||| ||| |||||||||||||    
T  34342315 gtcaaaccttccgagtttaccagaaaccgagtttaccttagtgctaacatggatttggtacctaaaaacgtaaactcggtaaactcagagagttaacact 34342216  T
Q  512 cgatttgcggaacattg 528  Q
    |||||||||||||||||    
T  34342215 cgatttgcggaacattg 34342199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 412 - 527
Target Start/End: Complemental strand, 40829713 - 40829596
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaa--gctcggagagttaaca 509  Q
    |||||||||||| |||||||||||||| ||||||||||  ||||||||||||||||| |||||||||| ||| |||| ||||   |||||||||||||||    
T  40829713 gtcaaacctttctattttaccagaaaccgagtttacctccgagttaacacgattttgatacctaaaaatgtagactcggtaaactctcggagagttaaca 40829614  T
Q  510 ctcgatttgcggaacatt 527  Q
    ||| |||| |||||||||    
T  40829613 ctcaatttacggaacatt 40829596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 10657953 - 10657840
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | ||||||||| |||  || |||||||  |||||||||||||||| |||||||||||||||||||| |||| ||| ||||||||||||||||    
T  10657953 aaaccttccaattttaccaaaaatcgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcagagagttaacactcga 10657854  T
Q  515 tttgcggaacattg 528  Q
    ||| ||||||||||    
T  10657853 tttacggaacattg 10657840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 28845108 - 28844995
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||| ||||||| || |||||||  |||||||||||||||| |||||||||||| |||||||  ||| ||||||||||||||||||||    
T  28845108 aaaccttccaattttatcagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacataaactcgataatctcggagagttaacactcga 28845009  T
Q  515 tttgcggaacattg 528  Q
    |||||||| |||||    
T  28845008 tttgcggatcattg 28844995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 424 - 528
Target Start/End: Original strand, 13833107 - 13833211
Alignment:
Q  424 gattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaa 523  Q
    |||||||| ||||| |||||||||||  |||||||||||||||| ||||||||||||||||||||  ||| |||| |||||||||| || ||||||||||    
T  13833107 gattttactagaaattgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgataatctcgaagagttaacattcaatttgcggaa 13833206  T
Q  524 cattg 528  Q
    |||||    
T  13833207 cattg 13833211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 418 - 528
Target Start/End: Complemental strand, 379450 - 379340
Alignment:
Q  418 cctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgattt 517  Q
    |||| |||||||| || |||| || |||||||  |||||||||||||||| ||||||||||||||||| || |||| |||  ||||||||||||||||||    
T  379450 ccttccgattttatcaaaaaccgaatttacctcagagttaacacgatttttgtacctaaaaacgtaaattcggtaatctcaaagagttaacactcgattt 379351  T
Q  518 gcggaacattg 528  Q
    |||||||||||    
T  379350 gcggaacattg 379340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 348 - 517
Target Start/End: Original strand, 2308665 - 2308843
Alignment:
Q  348 tatttttagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttttaactcggtcaaacctttc---------gattttaccagaaac 438  Q
    |||||||||| |||||||||||||| ||| || | ||||||||| |||| ||||| |||||| |||||||| | ||         |||||||||| ||||    
T  2308665 tatttttagaagtaaactcgtaaaactcgatcgagtttacacgattttaccgagtgttaacttggtcaaacttgtcaaactttttgattttaccacaaac 2308764  T
Q  439 tgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgattt 517  Q
     || |||||||  ||||||||||||||||||||| |||||||||||| | | ||| ||||| |||||||||||||||||    
T  2308765 cgaatttacctccgagttaacacgattttggtacataaaaacgtaaatttaataaactcggcgagttaacactcgattt 2308843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 33136139 - 33136028
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| ||||| |||||||||  ||||||||||  |||||||||||||||| |||||||||||| ||||||| ||   ||| ||||||||||||||||    
T  33136139 aaaccttccgattataccagaaatcgagtttacctcagagttaacacgatttttgtacctaaaaacataaactcggt--tctcagagagttaacactcga 33136042  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  33136041 tttgcggaacattg 33136028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 3575364 - 3575251
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  ||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||| | ||||    
T  3575364 aaaccttccaattttaccagaaaccgattttacctcagagttaacatgatttttgtacctaaaaacgtaaactcagtaatctcggatagttaatattcga 3575265  T
Q  515 tttgcggaacattg 528  Q
    |||| || ||||||    
T  3575264 tttgagggacattg 3575251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 26789308 - 26789195
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| || |||||  ||| |||||||| |||||||||||    
T  26789308 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtcaactcgataatctcggagatttaacactcga 26789209  T
Q  515 tttgcggaacattg 528  Q
    ||||| ||||||||    
T  26789208 tttgcagaacattg 26789195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 350 - 529
Target Start/End: Original strand, 31847171 - 31847360
Alignment:
Q  350 tttttagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttttaactcggtc---------aaacctttcgattttaccagaaactg 440  Q
    ||||||||| ||||||||||||| |||||||  ||||||||| |||| ||||| |||| ||||||         |||||||  ||||||| ||||||  |    
T  31847171 tttttagatttaaactcgtaaaactcggtcatgtttacacgagtttaccgagtgttaattcggtcgaactcgtcaaaccttctgattttatcagaaatag 31847270  T
Q  441 agtttacctatgagttaacacgattttggtacctaaaaacgtaaa-ctcagtaagctcggagagttaacactcgatttgcggaacattgc 529  Q
    |||||||||  |||||| || ||||||  |||||||||||||||| |||  ||| |||||||||||||||||||||||| ||||||||||    
T  31847271 agtttacctccgagttaccatgattttaatacctaaaaacgtaaaactcgataaactcggagagttaacactcgatttgaggaacattgc 31847360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 425 - 528
Target Start/End: Complemental strand, 18177784 - 18177681
Alignment:
Q  425 attttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaac 524  Q
    |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| |||| ||| |||||||||||||| ||||||    
T  18177784 attttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcgaagatttaacactcgatttacggaac 18177685  T
Q  525 attg 528  Q
    ||||    
T  18177684 attg 18177681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 412 - 529
Target Start/End: Original strand, 18899952 - 18900069
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| || ||||||||| |||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| ||||     
T  18899952 gtcaaactttccgattttactagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacg 18900051  T
Q  512 cgatttgcggaacattgc 529  Q
    ||||||| ||||||||||    
T  18900052 cgatttgtggaacattgc 18900069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 3464115 - 3464051
Alignment:
Q  463 attttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacatt 527  Q
    ||||| ||||||||||| |||||||| |||| |||||||||||||||| ||||||||||||||||    
T  3464115 atttttgtacctaaaaatgtaaactcggtaatctcggagagttaacacacgatttgcggaacatt 3464051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 412 - 488
Target Start/End: Original strand, 35404343 - 35404419
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||| || | ||||||||| |||| |||||||||| | |||||||||||||| |||||||||||||||||||||    
T  35404343 gtcaaactttccaattttaccaaaaaccgagtttacctctaagttaacacgatttcggtacctaaaaacgtaaactc 35404419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 345 - 473
Target Start/End: Original strand, 18727595 - 18727732
Alignment:
Q  345 ttatatttttagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttttaactcg---------gtcaaacctttcgattttaccaga 435  Q
    |||| ||||||||| ||||||||||||| |||||| | ||||||||| |||||||| | ||||||||         ||||||| ||| ||||||||||||    
T  18727595 ttatttttttagatataaactcgtaaaactcggtcgagtttacacgagtttatcgaatgttaactcggtgaaactcgtcaaactttttgattttaccaga 18727694  T
Q  436 aactgagtttacctatgagttaacacgattttggtacc 473  Q
    |   ||||||||||  ||||||||||| ||||||||||    
T  18727695 attcgagtttacctccgagttaacacggttttggtacc 18727732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 412 - 488
Target Start/End: Complemental strand, 3991850 - 3991774
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||| ||||||||| |||| |||| ||||||||||  ||||||||||| |||||  ||||||||||||||||||    
T  3991850 gtcaaacttttcgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactc 3991774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 404 - 488
Target Start/End: Complemental strand, 12877771 - 12877687
Alignment:
Q  404 ttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||||||||||| || |||||| | || |||| ||||||||||  ||||||||||| |||||  ||||||||||||||||||    
T  12877771 ttaactcggtcaaactttccgatttcatcaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactc 12877687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 412 - 488
Target Start/End: Complemental strand, 15926455 - 15926379
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||| || |||||||||||||||  ||||| ||||  ||||| |||||||||||||||| ||||||||||||||    
T  15926455 gtcaaacattgcgattttaccagaaatcgagttaacctccgagttgacacgattttggtaccaaaaaacgtaaactc 15926379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 485
Target Start/End: Original strand, 11153384 - 11153447
Alignment:
Q  422 tcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaa 485  Q
    ||||||||||||||||| ||||||||||  |||||||||||||||  | |||||||||||||||    
T  11153384 tcgattttaccagaaaccgagtttacctccgagttaacacgatttcagcacctaaaaacgtaaa 11153447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 488
Target Start/End: Complemental strand, 19948615 - 19948539
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||| || |||||| |||| |||||||||||||||  ||||||||||| |||||  ||||||||| ||||||||    
T  19948615 gtcaaactttccgatttcaccaaaaactgagtttacctccgagttaacacgtttttgccacctaaaaatgtaaactc 19948539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 488
Target Start/End: Complemental strand, 33262930 - 33262854
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||| || |||||| |||| |||| ||||||||||  ||||| ||||| |||||  ||||||||||||||||||    
T  33262930 gtcaaactttccgatttcaccaaaaaccgagtttaccttcgagtttacacgtttttgccacctaaaaacgtaaactc 33262854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 488
Target Start/End: Original strand, 38413478 - 38413554
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||| || |||||| |||| |||| ||||||||||  ||||| ||||| |||||  ||||||||||||||||||    
T  38413478 gtcaaactttccgatttcaccaaaaaccgagtttacctccgagtttacacgtttttgccacctaaaaacgtaaactc 38413554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 490
Target Start/End: Complemental strand, 13898553 - 13898475
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcag 490  Q
    ||||||| || |||||| |||| |||  ||||||||||  ||||||||||| |||||   |||||||||||||||||||    
T  13898553 gtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccgcctaaaaacgtaaactcag 13898475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 490
Target Start/End: Complemental strand, 14039170 - 14039092
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcag 490  Q
    ||||||| || |||||| |||| |||  ||||||||||  ||||||||||| |||||   |||||||||||||||||||    
T  14039170 gtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccgcctaaaaacgtaaactcag 14039092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 424 - 490
Target Start/End: Original strand, 32242242 - 32242308
Alignment:
Q  424 gattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcag 490  Q
    |||||||| |||||   |||||||||  |||||||||||||||||||| || |||| ||||||||||    
T  32242242 gattttacaagaaatcaagtttacctcagagttaacacgattttggtatctcaaaatgtaaactcag 32242308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 490
Target Start/End: Complemental strand, 32293989 - 32293912
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcag 490  Q
    ||||||| || ||||||||| |||||   ||||||| |  || ||||||||||||||||||| ||||||||||||||||    
T  32293989 gtcaaacattccgattttacaagaaatccagtttacatcagatttaacacgattttggtacc-aaaaacgtaaactcag 32293912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 517
Target Start/End: Original strand, 3858446 - 3858551
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| || ||||||||||| |||  ||||||||||   |||| |||| ||||||  || |||||||||||| || || | ||||| |||||||||||    
T  3858446 gtcaaacattccgattttaccaaaaatcgagtttaccttcaagttgacacaattttgacacttaaaaacgtaaattcggttaactcggcgagttaacact 3858545  T
Q  512 cgattt 517  Q
    | ||||    
T  3858546 caattt 3858551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 452 - 527
Target Start/End: Original strand, 43305035 - 43305111
Alignment:
Q  452 gagttaacacgattttggtaccta-aaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacatt 527  Q
    |||||||||| | |||| |||||| |||||| |||||| |||| ||||  || ||||||||||||||| ||||||||    
T  43305035 gagttaacactagtttgatacctataaaacgaaaactcggtaaactcgacgaattaacactcgatttgtggaacatt 43305111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 500 - 528
Target Start/End: Complemental strand, 43825327 - 43825299
Alignment:
Q  500 agagttaacactcgatttgcggaacattg 528  Q
    |||||||||||||||||||||||||||||    
T  43825327 agagttaacactcgatttgcggaacattg 43825299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 3e-34; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 412 - 530
Target Start/End: Complemental strand, 16438783 - 16438665
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    |||||||||| ||||||||||||||   ||||||||||   ||||||||||||||| ||||||||||||||||||||  ||| |||||||||||||||||    
T  16438783 gtcaaaccttccgattttaccagaagtcgagtttacctccaagttaacacgatttttgtacctaaaaacgtaaactcgataaactcggagagttaacact 16438684  T
Q  512 cgatttgcggaacattgct 530  Q
    |||||||||||||||||||    
T  16438683 cgatttgcggaacattgct 16438665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 350 - 528
Target Start/End: Complemental strand, 2607043 - 2606856
Alignment:
Q  350 tttttagatgtaaactcgtaaaattcggtcaattttacacgaatttatcgagttttaactcggtcaaac---------ctttcgattttaccagaaactg 440  Q
    ||||||||||||||||||||||| |||||| | |||| | || ||||| |||| |||||||||||||||         |||  ||||||||||||||  |    
T  2607043 tttttagatgtaaactcgtaaaactcggtcgagtttataagagtttattgagtgttaactcggtcaaactcatcaaaccttctgattttaccagaaatcg 2606944  T
Q  441 agtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattg 528  Q
    |||||||||  ||||||| ||||||||||| |||||| ||||||||||||||| |||  |||||||||| ||||||||||||||||||    
T  2606943 agtttacctcagagttaaaacgattttggtgcctaaacacgtaaactcagtaaactcaaagagttaacattcgatttgcggaacattg 2606856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 7497620 - 7497507
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| ||||||||||  |||||||||||||||| |||||||||||||||||||   ||| ||||||||||||||| ||||    
T  7497620 aaaccttccaattttaccagaaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacattcga 7497521  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  7497520 tttgcggaacattg 7497507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 30384743 - 30384856
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||| |||||||||| |||||||  |||||||||||||||| |||||||||||| ||||||| |||| ||||||||||||||||||||    
T  30384743 aaaccttccaattttatcagaaactgattttaccttagagttaacacgatttttgtacctaaaaacataaactcggtaatctcggagagttaacactcga 30384842  T
Q  515 tttgcggaacattg 528  Q
    |||||||| |||||    
T  30384843 tttgcggatcattg 30384856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 412 - 528
Target Start/End: Original strand, 31975675 - 31975791
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    |||||||||| ||||||||| |||||  ||||||||||  |||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||    
T  31975675 gtcaaaccttccgattttacaagaaatcgagtttacctcagagttaacacgattttggtacctaaacacataaactcagtaaactcggagagttaacact 31975774  T
Q  512 cgatttgcggaacattg 528  Q
     ||||||| || |||||    
T  31975775 tgatttgccgagcattg 31975791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 31067954 - 31067841
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| |||||||| |||||||||||    
T  31067954 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcga 31067855  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  31067854 tttgcggaacattg 31067841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 14262115 - 14262228
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||  || |||||||  |||||||||||||||| ||||||||||| |||||||   ||| ||||||||||||||||||||    
T  14262115 aaaccttccaattttaccagaaatcgattttacctcagagttaacacgatttttgtacctaaaaaagtaaactagataatctcggagagttaacactcga 14262214  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  14262215 tttgcggaacattg 14262228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 34758758 - 34758871
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||| ||||||| || |||||||  |||||||||||||||| |||||||||||||||||||   ||| |||||||||||||| |||||    
T  34758758 aaaccttccaattttatcagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcga 34758857  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  34758858 tttgcggaacattg 34758871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 4200130 - 4200243
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  ||||||||| |||||| |||| |||||| ||||||||  ||| |||||||| |||||||||||    
T  4200130 aaaccttccaattttaccagaaaccgattttacctcagagttaacatgatttttgtacttaaaaatgtaaactcgataatctcggagatttaacactcga 4200229  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  4200230 tttgcggaacattg 4200243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 31896159 - 31896046
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| ||| ||||  ||| |||||||| |||||||||||    
T  31896159 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtatactcgataatctcggagatttaacactcga 31896060  T
Q  515 tttgcggaacattg 528  Q
    ||| ||||||||||    
T  31896059 tttacggaacattg 31896046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 393 - 525
Target Start/End: Original strand, 28900842 - 28900965
Alignment:
Q  393 tttatcgagttttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagta 492  Q
    |||| ||||| ||||||||| |||||||| |||||||||||||||  ||||||||||  |||||||||||||||||||||||||| | |||||           
T  28900842 tttaccgagtgttaactcggccaaaccttccgattttaccagaaatcgagtttacctcagagttaacacgattttggtacctaaacatgtaaa------- 28900934  T
Q  493 agctcggagagttaacactcgatttgcggaaca 525  Q
      ||||||||||||||||||||||| |||||||    
T  28900935 --ctcggagagttaacactcgatttacggaaca 28900965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 423 - 527
Target Start/End: Complemental strand, 3000306 - 3000202
Alignment:
Q  423 cgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcgga 522  Q
    ||||||||||| |||  || ||||||   |||||||||||||||||||||||||| ||||||| ||||||| ||||| ||||||||||| |||||| |||    
T  3000306 cgattttaccataaatcgaatttacccccgagttaacacgattttggtacctaaacacgtaaaatcagtaaactcggcgagttaacacttgatttgtgga 3000207  T
Q  523 acatt 527  Q
    |||||    
T  3000206 acatt 3000202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 412 - 528
Target Start/End: Original strand, 1463694 - 1463810
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| || |||||||||||||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| ||||     
T  1463694 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacg 1463793  T
Q  512 cgatttgcggaacattg 528  Q
    ||||||| |||||||||    
T  1463794 cgatttgtggaacattg 1463810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 412 - 528
Target Start/End: Complemental strand, 6788177 - 6788061
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| || |||||||||||||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| ||||     
T  6788177 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacg 6788078  T
Q  512 cgatttgcggaacattg 528  Q
    ||||||| |||||||||    
T  6788077 cgatttgtggaacattg 6788061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 412 - 530
Target Start/End: Original strand, 10113803 - 10113921
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| || ||||||||||| |||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| ||||     
T  10113803 gtcaaactttccgattttaccaaaaaacgagtttacctccgagttaacacgtttttaggacctaaacacgtaaactcggtaaactcgccgagttgacacg 10113902  T
Q  512 cgatttgcggaacattgct 530  Q
    ||||||| |||||||||||    
T  10113903 cgatttgtggaacattgct 10113921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 387 - 477
Target Start/End: Original strand, 33641286 - 33641376
Alignment:
Q  387 cacgaatttatcgagttttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaa 477  Q
    ||||| |||||||||| ||||||||||||||||||  ||||||||||  || ||||||||| |  ||||||||||||||||| ||||||||    
T  33641286 cacgagtttatcgagtgttaactcggtcaaaccttatgattttaccattaattgagtttacatcagagttaacacgattttgatacctaaa 33641376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 412 - 488
Target Start/End: Original strand, 31535083 - 31535159
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||||||||||||||||||||||  |||||| |||  |||||||||| |||||| |||||||||| ||||||||    
T  31535083 gtcaaacctttcgattttaccagaaatcgagtttgcctcagagttaacacaattttgatacctaaaaatgtaaactc 31535159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 404 - 488
Target Start/End: Original strand, 7835379 - 7835463
Alignment:
Q  404 ttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||||||||||| || |||||| |||| |||| ||||||||||  || |||||||| |||||  ||||||||||||||||||    
T  7835379 ttaactcggtcaaactttccgatttcaccaaaaaccgagtttacctccgacttaacacgtttttgccacctaaaaacgtaaactc 7835463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 424 - 490
Target Start/End: Complemental strand, 13461438 - 13461372
Alignment:
Q  424 gattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcag 490  Q
    |||||||||| |||| ||||||||||  ||||| ||||||||||| ||| |||||||||||||||||    
T  13461438 gattttaccaaaaaccgagtttacctccgagttgacacgattttgatacataaaaacgtaaactcag 13461372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 462 - 528
Target Start/End: Complemental strand, 34773872 - 34773807
Alignment:
Q  462 gattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattg 528  Q
    |||||| ||||||||||  ||||||||| ||| |||||||| |||||||||||||||||||||||||    
T  34773872 gatttttgtacctaaaat-gtaaactcaataatctcggagatttaacactcgatttgcggaacattg 34773807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 488
Target Start/End: Original strand, 8779604 - 8779680
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||| || |||||| |||| |||| ||||||||||  ||||||||||| |||||  ||||||||||||||||||    
T  8779604 gtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactc 8779680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 488
Target Start/End: Original strand, 31996271 - 31996347
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||| || |||||| |||| |||  ||||||||||  ||||||||||| |||||  ||||||||||||||||||    
T  31996271 gtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactc 31996347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 487
Target Start/End: Complemental strand, 21199631 - 21199556
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaact 487  Q
    ||||||| || |||||| |||| |||  ||||||||||  ||||||||||| |||||  |||||||||||||||||    
T  21199631 gtcaaactttccgatttcaccaaaaatcgagtttaccttggagttaacacggttttgccacctaaaaacgtaaact 21199556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 3e-34; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 418 - 528
Target Start/End: Original strand, 1460828 - 1460938
Alignment:
Q  418 cctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgattt 517  Q
    |||| |||||||||||||||| |||||||||| ||||||||||| ||||| |||||||||||||||||||| |||| |||  ||||||||||||||||||    
T  1460828 ccttccgattttaccagaaaccgagtttacctctgagttaacacaatttttgtacctaaaaacgtaaactcggtaatctcaaagagttaacactcgattt 1460927  T
Q  518 gcggaacattg 528  Q
    |||||||||||    
T  1460928 gcggaacattg 1460938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 4240145 - 4240258
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| |||||||||||||||| ||||||||||  |||||||||||||||| | |||||||||||||||||| |||| ||| |||||||||||||| |    
T  4240145 aaaccttccgattttaccagaaacggagtttacctcagagttaacacgatttttgcacctaaaaacgtaaactcggtaatctcagagagttaacactcaa 4240244  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  4240245 tttgcggaacattg 4240258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 4549937 - 4550050
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||| |||||||||| |||| ||||||||||||||||||||    
T  4549937 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaacacgtaaactcggtaatctcggagagttaacactcga 4550036  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  4550037 tttgcggaacattg 4550050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 13926454 - 13926341
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||||||||||||  ||| ||||||||||||||||||||    
T  13926454 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgataatctcggagagttaacactcga 13926355  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  13926354 tttgcggaacattg 13926341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 37014377 - 37014264
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||||| |||||||||||||| || |||||||  |||||||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||    
T  37014377 aaacctttcaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcga 37014278  T
Q  515 tttgcggaacattg 528  Q
    |||||| |||||||    
T  37014277 tttgcgaaacattg 37014264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 374 - 528
Target Start/End: Complemental strand, 34218584 - 34218430
Alignment:
Q  374 tcggtcaattttacacgaatttatcgagttttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacc 473  Q
    |||||| | ||||||||||||||  |||| ||||||||||||||||||  ||||||| ||||||| || |||||||  || ||||||||||||||||| |    
T  34218584 tcggtcgagtttacacgaatttactgagtattaactcggtcaaaccttctgattttagcagaaaccgaatttaccttcgaattaacacgattttggtatc 34218485  T
Q  474 taaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattg 528  Q
    ||||||||||||||  |||| ||| ||| |||||||||| |||||||||| ||||    
T  34218484 taaaaacgtaaacttggtaaactcagagtgttaacactcaatttgcggaatattg 34218430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 412 - 531
Target Start/End: Original strand, 16548869 - 16548988
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| |||||||||||||||||| |||||||||||  ||||| |||||||||||||||||||||||||||||||  ||| |||   |||||||||||    
T  16548869 gtcaaacatttcgattttaccagaaattgagtttacctccgagttgacacgattttggtacctaaaaacgtaaactcgataaactcaatgagttaacact 16548968  T
Q  512 cgatttgcggaacattgctt 531  Q
    ||||||  ||||||||||||    
T  16548969 cgatttatggaacattgctt 16548988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 5949634 - 5949522
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  |||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||| ||||||    
T  5949634 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactga-taatctcggagagttaatactcga 5949536  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  5949535 tttgcggaacattg 5949522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 415 - 527
Target Start/End: Original strand, 40013384 - 40013496
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||||||  ||||||||||||||||  ||| |||||| |||||||| |||| ||||||||||||||||||||    
T  40013384 aaaccttccaattttaccagaaaccgattttacctcagagttaacacgatttttatacttaaaaatgtaaactcggtaatctcggagagttaacactcga 40013483  T
Q  515 tttgcggaacatt 527  Q
    |||||||||||||    
T  40013484 tttgcggaacatt 40013496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 412 - 517
Target Start/End: Original strand, 29716815 - 29716920
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||||||  ||||||||||||||   |||||||||  ||||||||||||||||| ||||||||||||||||||| |||| || ||||||||||||||    
T  29716815 gtcaaaccttctgattttaccagaaatcaagtttaccttcgagttaacacgattttgatacctaaaaacgtaaactccgtaaacttggagagttaacact 29716914  T
Q  512 cgattt 517  Q
    ||||||    
T  29716915 cgattt 29716920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 39852893 - 39852780
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | ||||||||| |||  || |||||||  |||||||||||||||| ||||||||||| ||||||||  ||| ||||||||||||||||||||    
T  39852893 aaaccttccaattttaccaaaaatcgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagagttaacactcga 39852794  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  39852793 tttgcggaacattg 39852780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 412 - 528
Target Start/End: Original strand, 5651211 - 5651327
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| |||| |||| ||||||||  ||||||||||  |||||||||||||||||||||||||| ||||||| ||  ||| |||| || |||||||||    
T  5651211 gtcaaacttttcaatttcaccagaaatcgagtttacctccgagttaacacgattttggtacctaaacacgtaaaatcgataaactcgaagtgttaacact 5651310  T
Q  512 cgatttgcggaacattg 528  Q
    |||||||||||||||||    
T  5651311 cgatttgcggaacattg 5651327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 410 - 526
Target Start/End: Original strand, 15672703 - 15672819
Alignment:
Q  410 cggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaaca 509  Q
    ||||||||| || ||||||||||| |||   |||||| || |||||| |||||||||| |||||||||||| |||||||||||| ||||| |||||||||    
T  15672703 cggtcaaacattccgattttaccataaatcaagtttatctttgagttgacacgattttagtacctaaaaacataaactcagtaaactcggcgagttaaca 15672802  T
Q  510 ctcgatttgcggaacat 526  Q
    || |||||| |||||||    
T  15672803 cttgatttgtggaacat 15672819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 13999773 - 13999886
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | |||||||||||||| || |||| ||   ||||||||||||||| ||||||||||| || |||||  ||| |||||||| |||||||||||    
T  13999773 aaaccttccaattttaccagaaaccgattttatctcaaagttaacacgatttttgtacctaaaaatgtcaactccataatctcggagatttaacactcga 13999872  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  13999873 tttgcggaacattg 13999886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 412 - 528
Target Start/End: Original strand, 7125189 - 7125305
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| || |||||||||||||||  ||||||||||  ||||||||||| |||| | ||||||| |||||||||| |||| ||||  ||||| ||||     
T  7125189 gtcaaactttccgattttaccagaaatcgagtttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacg 7125288  T
Q  512 cgatttgcggaacattg 528  Q
    ||||||| |||||||||    
T  7125289 cgatttgtggaacattg 7125305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 412 - 532
Target Start/End: Original strand, 37798144 - 37798263
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| |||||||||||||||||| ||||||||||| |||||||||||| ||||   |  |||| |||||||||| |||| ||||  ||||| ||||     
T  37798144 gtcaaacttttcgattttaccagaaattgagtttacctttgagttaacacgtttttaacagataaacacgtaaactcggtaaactcgccgagttgacac- 37798242  T
Q  512 cgatttgcggaacattgcttt 532  Q
    ||||||| |||||||||||||    
T  37798243 cgatttgtggaacattgcttt 37798263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 424 - 527
Target Start/End: Complemental strand, 21489965 - 21489862
Alignment:
Q  424 gattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaa 523  Q
    ||||||||||||||   |||||| ||  || || |||||||||||||||||||||| ||||| ||| ||| || | | ||||||||||||||||| ||||    
T  21489965 gattttaccagaaatcaagtttatcttcgaattgacacgattttggtacctaaaaatgtaaaatcaataaacttgaaaagttaacactcgatttgtggaa 21489866  T
Q  524 catt 527  Q
    ||||    
T  21489865 catt 21489862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 407 - 488
Target Start/End: Complemental strand, 25868881 - 25868800
Alignment:
Q  407 actcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    |||||||||||| || |||||| |||| |||| ||||||||||  ||||||||||| |||||  |||||||||| |||||||    
T  25868881 actcggtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacataaactc 25868800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 488
Target Start/End: Original strand, 2675098 - 2675174
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||| ||||||||| |||| |||  ||||||||||  ||||||||||| |||||  ||||||||||||||||||    
T  2675098 gtcaaacttttcgatttcaccaaaaatcgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactc 2675174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 528
Target Start/End: Original strand, 28623191 - 28623307
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacact 511  Q
    ||||||| || | |||||||||||||  ||||||| ||  ||||||||||| |||| | ||||||| ||||||||||  ||| ||||  ||||| ||||     
T  28623191 gtcaaactttgcaattttaccagaaatcgagtttatctccgagttaacacgtttttagcacctaaacacgtaaactcgataaactcgctgagttgacacg 28623290  T
Q  512 cgatttgcggaacattg 528  Q
    ||||||| |||||||||    
T  28623291 cgatttgtggaacattg 28623307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 412 - 485
Target Start/End: Original strand, 21238783 - 21238856
Alignment:
Q  412 gtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaa 485  Q
    ||||||| || ||||||||||| |||| ||||||||||  ||||||||||| |||||  | |||||||||||||    
T  21238783 gtcaaactttccgattttaccaaaaaccgagtttacctccgagttaacacgtttttgccatctaaaaacgtaaa 21238856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 452 - 488
Target Start/End: Complemental strand, 29758743 - 29758707
Alignment:
Q  452 gagttaacacgattttggtacctaaaaacgtaaactc 488  Q
    ||||||||||||||||| |||||||||||||||||||    
T  29758743 gagttaacacgattttgatacctaaaaacgtaaactc 29758707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 1389 - 1276
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | ||||||| |||||| || |||||||  |||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  1389 aaaccttccaattttacaagaaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcga 1290  T
Q  515 tttgcggaacattg 528  Q
    |||| |||||||||    
T  1289 tttgtggaacattg 1276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 415 - 528
Target Start/End: Complemental strand, 11047 - 10934
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcga 514  Q
    ||||||| | ||||||||| |||  || |||||||  |||||||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||    
T  11047 aaaccttccaattttaccaaaaatcgaatttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcga 10948  T
Q  515 tttgcggaacattg 528  Q
    ||||||||||||||    
T  10947 tttgcggaacattg 10934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 345 - 528
Target Start/End: Complemental strand, 89424 - 89241
Alignment:
Q  345 ttatatttttagatgtaaactcgtaaaattcggtcaattttacacgaat-ttatcgagttttaactcggtcaaacctttcgattttaccagaaactgagt 443  Q
    |||| ||||||||||||||||||||||| |||||  | ||||||||| | ||| |  | |  |||||| ||||||||| | |||||||||||||  ||||    
T  89424 ttatgtttttagatgtaaactcgtaaaactcggtggagtttacacgagtgttaactcgatcaaactcg-tcaaaccttccaattttaccagaaatcgagt 89326  T
Q  444 ttacctatgagttaacacgattttggtacctaaaaacgtaaactcagtaagctcggagagttaacactcgatttgcggaacattg 528  Q
    ||||||   |||||||||||| ||||||||||||||| |||||||  ||| |||  |||||||||||||||||| ||||||||||    
T  89325 ttaccttcaagttaacacgatattggtacctaaaaacttaaactcgataaactcacagagttaacactcgatttacggaacattg 89241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 393 - 525
Target Start/End: Complemental strand, 8952 - 8829
Alignment:
Q  393 tttatcgagttttaactcggtcaaacctttcgattttaccagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcagta 492  Q
    |||| ||||| ||||||||| |||||||| |||||||||||||||  ||||||||||  |||||||||||||||||||||||||| | |||||           
T  8952 tttaccgagtgttaactcggccaaaccttccgattttaccagaaatcgagtttacctcagagttaacacgattttggtacctaaacatgtaaa------- 8860  T
Q  493 agctcggagagttaacactcgatttgcggaaca 525  Q
      ||||||||||||||||||||||| |||||||    
T  8859 --ctcggagagttaacactcgatttacggaaca 8829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 461
Target Start/End: Original strand, 16708 - 16754
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacac 461  Q
    |||||||||||||||||||||||| ||||||||||  ||||||||||    
T  16708 aaacctttcgattttaccagaaaccgagtttacctcagagttaacac 16754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 461
Target Start/End: Original strand, 20944 - 20990
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacac 461  Q
    |||||||||||||||||||||||| ||||||||||  ||||||||||    
T  20944 aaacctttcgattttaccagaaaccgagtttacctcagagttaacac 20990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 461
Target Start/End: Complemental strand, 28857 - 28811
Alignment:
Q  415 aaacctttcgattttaccagaaactgagtttacctatgagttaacac 461  Q
    |||||||||||||||||||||||| ||||||||||  ||||||||||    
T  28857 aaacctttcgattttaccagaaaccgagtttacctcagagttaacac 28811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 430 - 490
Target Start/End: Original strand, 25642 - 25702
Alignment:
Q  430 accagaaactgagtttacctatgagttaacacgattttggtacctaaaaacgtaaactcag 490  Q
    |||| |||| ||||||||||  ||||||||||| |||||  ||||||||||||||||||||    
T  25642 accaaaaaccgagtttacctccgagttaacacgtttttgccacctaaaaacgtaaactcag 25702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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