View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15176_high_24 (Length: 261)
Name: NF15176_high_24
Description: NF15176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15176_high_24 |
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Alignment Details
Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 3651204 - 3651436
Alignment:
| Q |
1 |
attggttttgatcatatgaaaatgattaaattatttgtatgaagaagatattatttgcagcgatagaaacgaatataattagcttaaaattattatgaga |
100 |
Q |
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| T |
3651204 |
attggttttgatcatatgaaaatgattaaattatttgtatgaagaagatattatttgcagcaat-gaaacgaatataattagcttaaaattattatgaga |
3651302 |
T |
|
| Q |
101 |
actcatttttaagtgttttaaacttaaaagaatgaattcaattacaaaattggcttattaaaaattactcctgaattcaatcattgaaatggctgttgat |
200 |
Q |
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| T |
3651303 |
actcatttttaagtgttttaaacttaaaagaatgaattcaattacaaaattggcttattaaaaattactcctgaattcaatcattgaaatggctgttgat |
3651402 |
T |
|
| Q |
201 |
aattctcaatatgttggattttctaaattgcggc |
234 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
3651403 |
aattctcaatatgttggattttctaaattgcggc |
3651436 |
T |
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