View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15176_low_15 (Length: 379)
Name: NF15176_low_15
Description: NF15176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15176_low_15 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 347; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 1 - 379
Target Start/End: Complemental strand, 37203990 - 37203612
Alignment:
| Q |
1 |
tcatctatttgtagcaccataaatgttgcatttaatccaatgatttaaaggaggccgccatacaacttctttaatcctaggcacaataggaggatgaatg |
100 |
Q |
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| T |
37203990 |
tcatctatttgtagcaccataaatgttgcatttaatccaatcatttaaaggaggccgccataaaacttctttaatcctaggcacaataggaggatgaatg |
37203891 |
T |
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| Q |
101 |
ttcgtcggtcgagaaggccttcaaaatatggacacccttaatagaggatgtggtagttgttagagcaagaattattgtcacacatcatcgtattacaaat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |
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| T |
37203890 |
ttcgtcggtcgagaaggccttcaaaatatggacacccttaatagaggatgtggtagttgttagagcaggtattattgtcacacatcatcgtattacaaat |
37203791 |
T |
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| Q |
201 |
tttacggcaatttaatatctcgattattcttctcaaccacactacttggcaaacacgcgatgcagcaattgtaaattctgcttcagtggtagaaagtgta |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
37203790 |
tttacggcaatttaatatctcgattattcttctcaaccacgctacttggcaaacacacgatgcagcaactgtaaattctgcttcagtggtagaaagtgta |
37203691 |
T |
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| Q |
301 |
actatatgttgcttctaagttgaccaggaaatgccagctgacacattatttgatgtgttctttttatcatcaacatcat |
379 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37203690 |
actatatgttgcttctaagttgaccaggaaatgacagctgacacattatttgatgtgttctttttatcatcaacatcat |
37203612 |
T |
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