View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15178_high_62 (Length: 235)
Name: NF15178_high_62
Description: NF15178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15178_high_62 |
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Alignment Details
Target: chr4 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 41138682 - 41138462
Alignment:
| Q |
1 |
aagagttaagatcctcttgatttgataaacggagataatcatagc-ctaatagaaaaagttaggattgataatatttaaaaacaccaaagggtatttagg |
99 |
Q |
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| T |
41138682 |
aagagttaagatcctcttgatttgataaacggagataatcatagcactaatagaaaaagttaggattgataatatttaaaaacaccaaagggtatttagg |
41138583 |
T |
|
| Q |
100 |
tattttgaaaagggcaagctagggacattagatggggacctcttattatatcaatagttaa-aaaagaaagaataaagcaataataattccctctccaac |
198 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |
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| T |
41138582 |
tattttgaaaagggcaagctagggacattagatggggacctcttattatatcaatagttaaaaaaagaaagaataaagcaataataattccccctccaac |
41138483 |
T |
|
| Q |
199 |
tcttatttaaaaccttcaatc |
219 |
Q |
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||||||||||||||||||||| |
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| T |
41138482 |
tcttatttaaaaccttcaatc |
41138462 |
T |
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