View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15178_high_67 (Length: 209)
Name: NF15178_high_67
Description: NF15178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15178_high_67 |
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Alignment Details
Target: chr1 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 20 - 193
Target Start/End: Original strand, 26872628 - 26872808
Alignment:
| Q |
20 |
ttgtgtgctttggaaaacgactggaccaaatctttatgttttgacaaaggtttggtatggtagtttggtgtagtcctttctgtccc-------atgatta |
112 |
Q |
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| T |
26872628 |
ttgtgtgctttggaaaacgactgaaccaaatccttatgttttgacaaaggtttggtatggtagtttggtgtagtcctttctgtcccaattcccatgatta |
26872727 |
T |
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| Q |
113 |
catgttattactattttcattattttctttatccctctaatgtggcattaatgaaactaaaaggatgtagttgcccttcat |
193 |
Q |
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| T |
26872728 |
catgttattactattttcattattttctttatccctctaatgtgacattaatgaaactaaaaggatgtagttgcccttcat |
26872808 |
T |
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