View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15178_low_61 (Length: 244)
Name: NF15178_low_61
Description: NF15178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15178_low_61 |
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Alignment Details
Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 33 - 241
Target Start/End: Original strand, 36733148 - 36733356
Alignment:
| Q |
33 |
tgggttatgttcactaaacaataattcctcgaaagaatccataaaattatgcaaacctgattaaaacatgaaagaagataaactctttttgcttggaatt |
132 |
Q |
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| T |
36733148 |
tgggttatgttcactaaacaacaattcctcgaaagaatccataaaattatgtaaacctgattaaaacatgaaagaagataaactctttttgcttggaatt |
36733247 |
T |
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| Q |
133 |
tctacatgatttttcatcgtaatatctacctcttctctcactctccttctttcatatttgtatttcctttcctacatgccacaatctttataccttctct |
232 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36733248 |
tctacatgatttttcatcgtaatatctacctcttctctcactctccttctttcatatttgtatttcctttcctacatgccacaatctttataccttctct |
36733347 |
T |
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| Q |
233 |
cttcttctc |
241 |
Q |
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||| ||||| |
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| T |
36733348 |
ctttttctc |
36733356 |
T |
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