View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15178_low_72 (Length: 230)

Name: NF15178_low_72
Description: NF15178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15178_low_72
NF15178_low_72
[»] chr6 (62 HSPs)
chr6 (1-215)||(32298458-32298679)
chr6 (139-213)||(7265589-7265663)
chr6 (124-217)||(19040337-19040430)
chr6 (139-213)||(5732506-5732580)
chr6 (143-213)||(9027167-9027237)
chr6 (107-201)||(32511630-32511724)
chr6 (96-215)||(7977783-7977902)
chr6 (106-213)||(9658868-9658975)
chr6 (143-205)||(7151409-7151471)
chr6 (143-213)||(34073347-34073417)
chr6 (124-204)||(31579208-31579286)
chr6 (133-201)||(7377980-7378048)
chr6 (143-215)||(10294094-10294166)
chr6 (1-48)||(32299705-32299753)
chr6 (145-196)||(7086801-7086852)
chr6 (122-213)||(17841568-17841659)
chr6 (96-211)||(33001242-33001357)
chr6 (143-213)||(7996378-7996448)
chr6 (143-213)||(8022353-8022423)
chr6 (143-201)||(9025494-9025552)
chr6 (143-201)||(10888974-10889032)
chr6 (139-201)||(21924931-21924993)
chr6 (142-211)||(9629374-9629443)
chr6 (151-204)||(30866152-30866205)
chr6 (139-216)||(34172179-34172256)
chr6 (143-195)||(9195754-9195806)
chr6 (151-210)||(10842524-10842583)
chr6 (106-181)||(12690437-12690512)
chr6 (143-210)||(21395308-21395374)
chr6 (139-213)||(7938105-7938179)
chr6 (113-211)||(13364675-13364773)
chr6 (144-213)||(19044453-19044522)
chr6 (143-199)||(9617437-9617493)
chr6 (143-211)||(20371110-20371178)
chr6 (141-213)||(21424800-21424872)
chr6 (139-199)||(24614413-24614473)
chr6 (134-213)||(8776964-8777043)
chr6 (157-196)||(8805586-8805625)
chr6 (151-210)||(26562681-26562740)
chr6 (106-201)||(28715296-28715391)
chr6 (143-213)||(677826-677896)
chr6 (143-213)||(10770674-10770744)
chr6 (139-201)||(13360368-13360430)
chr6 (145-203)||(13689494-13689552)
chr6 (151-201)||(13851737-13851787)
chr6 (143-213)||(16766686-16766756)
chr6 (151-213)||(17341672-17341734)
chr6 (151-197)||(24832593-24832639)
chr6 (145-195)||(26178683-26178733)
chr6 (107-213)||(28152088-28152193)
chr6 (107-177)||(32978863-32978933)
chr6 (152-201)||(1532241-1532290)
chr6 (139-176)||(4864089-4864126)
chr6 (144-201)||(5462687-5462744)
chr6 (147-204)||(7569172-7569229)
chr6 (151-219)||(10339133-10339202)
chr6 (134-195)||(34595141-34595202)
chr6 (143-179)||(7027265-7027301)
chr6 (151-195)||(17302354-17302398)
chr6 (142-202)||(20518345-20518405)
chr6 (157-213)||(34290091-34290147)
chr6 (159-211)||(34447374-34447426)
[»] chr4 (42 HSPs)
chr4 (107-213)||(21945492-21945598)
chr4 (107-201)||(8423682-8423776)
chr4 (107-195)||(35157949-35158037)
chr4 (145-213)||(36635313-36635381)
chr4 (142-201)||(15029766-15029825)
chr4 (139-205)||(16189706-16189772)
chr4 (120-194)||(48139272-48139346)
chr4 (143-204)||(15659760-15659821)
chr4 (107-211)||(23292950-23293054)
chr4 (139-203)||(33950135-33950199)
chr4 (107-179)||(40179600-40179672)
chr4 (151-211)||(40613441-40613501)
chr4 (137-188)||(42014972-42015024)
chr4 (144-203)||(7214523-7214582)
chr4 (107-194)||(12895238-12895325)
chr4 (121-204)||(29205442-29205525)
chr4 (144-194)||(5775359-5775409)
chr4 (110-211)||(49431016-49431118)
chr4 (152-201)||(22440609-22440658)
chr4 (134-195)||(54580014-54580075)
chr4 (144-192)||(18576038-18576086)
chr4 (153-200)||(903924-903971)
chr4 (86-179)||(4157459-4157553)
chr4 (140-179)||(10499267-10499306)
chr4 (151-213)||(35723392-35723455)
chr4 (143-194)||(40783965-40784016)
chr4 (151-197)||(999356-999402)
chr4 (139-201)||(2361971-2362033)
chr4 (121-179)||(4157172-4157230)
chr4 (107-193)||(9996849-9996935)
chr4 (151-201)||(13134451-13134501)
chr4 (143-201)||(13783282-13783340)
chr4 (155-213)||(21539879-21539937)
chr4 (151-208)||(11931274-11931331)
chr4 (107-196)||(28964212-28964301)
chr4 (128-193)||(30103342-30103406)
chr4 (148-201)||(30522920-30522973)
chr4 (143-200)||(30982878-30982935)
chr4 (137-194)||(36386205-36386262)
chr4 (155-215)||(3731190-3731250)
chr4 (155-215)||(5527174-5527234)
chr4 (143-179)||(46083991-46084027)
[»] chr1 (67 HSPs)
chr1 (143-213)||(6427339-6427409)
chr1 (139-210)||(14332638-14332709)
chr1 (139-213)||(9709809-9709883)
chr1 (122-213)||(36878450-36878541)
chr1 (95-213)||(8842666-8842784)
chr1 (107-201)||(38078625-38078719)
chr1 (139-201)||(39953142-39953204)
chr1 (107-201)||(40181872-40181966)
chr1 (127-213)||(2896105-2896191)
chr1 (107-201)||(5898230-5898324)
chr1 (139-201)||(13436459-13436521)
chr1 (107-201)||(22515851-22515945)
chr1 (139-201)||(41877466-41877528)
chr1 (113-210)||(21530681-21530778)
chr1 (148-213)||(36905986-36906051)
chr1 (122-202)||(28674800-28674880)
chr1 (121-213)||(46348361-46348453)
chr1 (139-194)||(1864876-1864931)
chr1 (134-213)||(22881607-22881686)
chr1 (151-210)||(25098563-25098622)
chr1 (144-199)||(27471567-27471622)
chr1 (107-194)||(40258897-40258984)
chr1 (143-198)||(44482234-44482289)
chr1 (151-213)||(398773-398835)
chr1 (127-213)||(5927324-5927410)
chr1 (145-219)||(10572591-10572665)
chr1 (145-195)||(12713329-12713379)
chr1 (145-195)||(12717420-12717470)
chr1 (107-213)||(13997872-13997978)
chr1 (151-213)||(17831539-17831601)
chr1 (143-201)||(20157350-20157408)
chr1 (143-201)||(34371715-34371772)
chr1 (151-204)||(10233251-10233304)
chr1 (144-213)||(19562622-19562691)
chr1 (157-210)||(25452162-25452215)
chr1 (137-201)||(29229462-29229527)
chr1 (151-196)||(34712391-34712436)
chr1 (86-201)||(38075911-38076028)
chr1 (144-201)||(38503321-38503378)
chr1 (143-215)||(1486709-1486781)
chr1 (107-179)||(1815280-1815352)
chr1 (151-195)||(7918219-7918263)
chr1 (139-179)||(30749863-30749903)
chr1 (139-179)||(30771314-30771354)
chr1 (107-195)||(42359413-42359501)
chr1 (143-210)||(9828036-9828103)
chr1 (152-215)||(12443469-12443532)
chr1 (143-190)||(25272494-25272541)
chr1 (139-174)||(39130763-39130798)
chr1 (151-222)||(40285662-40285733)
chr1 (107-210)||(43492458-43492561)
chr1 (158-213)||(48450602-48450657)
chr1 (134-176)||(7353484-7353526)
chr1 (143-213)||(18556456-18556526)
chr1 (151-201)||(25361887-25361937)
chr1 (140-218)||(31667409-31667487)
chr1 (139-213)||(35702584-35702658)
chr1 (141-195)||(35999320-35999374)
chr1 (144-194)||(41017405-41017455)
chr1 (146-204)||(42325558-42325616)
chr1 (143-212)||(113289-113358)
chr1 (152-201)||(19324563-19324612)
chr1 (156-201)||(34298437-34298482)
chr1 (144-196)||(16927186-16927238)
chr1 (145-201)||(23738679-23738735)
chr1 (134-210)||(29163372-29163448)
chr1 (139-179)||(52903272-52903312)
[»] chr5 (38 HSPs)
chr5 (122-202)||(30502367-30502447)
chr5 (122-202)||(30542710-30542790)
chr5 (134-209)||(16203786-16203861)
chr5 (143-213)||(3966492-3966562)
chr5 (143-213)||(11685928-11685998)
chr5 (86-211)||(28588616-28588742)
chr5 (151-213)||(27144452-27144514)
chr5 (143-201)||(36838544-36838602)
chr5 (107-179)||(43564904-43564976)
chr5 (106-201)||(27932236-27932331)
chr5 (143-201)||(6471889-6471947)
chr5 (151-213)||(12264837-12264899)
chr5 (107-213)||(21191020-21191126)
chr5 (138-212)||(23220973-23221047)
chr5 (128-196)||(23012393-23012461)
chr5 (134-197)||(12927659-12927722)
chr5 (122-213)||(17123037-17123128)
chr5 (127-201)||(18421825-18421899)
chr5 (143-201)||(39205881-39205939)
chr5 (146-199)||(17593725-17593778)
chr5 (154-195)||(35017044-35017085)
chr5 (144-192)||(14873527-14873575)
chr5 (86-201)||(42893361-42893477)
chr5 (158-213)||(14674258-14674313)
chr5 (134-205)||(21576736-21576807)
chr5 (134-213)||(24906292-24906371)
chr5 (143-213)||(6035472-6035541)
chr5 (139-213)||(6247611-6247685)
chr5 (143-201)||(19579702-19579760)
chr5 (139-213)||(26312758-26312832)
chr5 (143-201)||(32766943-32767001)
chr5 (139-213)||(33178014-33178088)
chr5 (151-201)||(41091265-41091315)
chr5 (107-196)||(21194087-21194176)
chr5 (145-210)||(38749565-38749630)
chr5 (153-201)||(2577190-2577238)
chr5 (145-213)||(15410450-15410518)
chr5 (155-215)||(28262408-28262468)
[»] chr7 (49 HSPs)
chr7 (107-197)||(21880157-21880247)
chr7 (139-201)||(20549792-20549854)
chr7 (107-201)||(27093377-27093471)
chr7 (107-201)||(27184830-27184924)
chr7 (107-201)||(32287427-32287521)
chr7 (139-196)||(3721099-3721156)
chr7 (145-213)||(15902811-15902879)
chr7 (106-201)||(42720853-42720948)
chr7 (147-201)||(8160417-8160471)
chr7 (127-213)||(22484014-22484100)
chr7 (107-201)||(26733305-26733399)
chr7 (151-213)||(32308109-32308171)
chr7 (107-211)||(1433445-1433554)
chr7 (146-215)||(2948670-2948739)
chr7 (145-194)||(5233637-5233686)
chr7 (128-201)||(5835248-5835321)
chr7 (143-196)||(7328691-7328744)
chr7 (98-211)||(25481893-25482006)
chr7 (139-179)||(18213029-18213069)
chr7 (139-194)||(38143231-38143286)
chr7 (121-179)||(15680832-15680890)
chr7 (143-213)||(22602710-22602780)
chr7 (151-213)||(22868031-22868093)
chr7 (140-197)||(9482939-9482996)
chr7 (144-201)||(19206051-19206108)
chr7 (145-201)||(29787373-29787427)
chr7 (151-207)||(5548671-5548727)
chr7 (143-191)||(17307904-17307952)
chr7 (151-199)||(17851434-17851482)
chr7 (145-201)||(33384584-33384640)
chr7 (143-194)||(16341504-16341555)
chr7 (143-194)||(35297672-35297723)
chr7 (107-201)||(598209-598303)
chr7 (151-213)||(6630920-6630982)
chr7 (139-201)||(8090021-8090083)
chr7 (143-201)||(19992002-19992060)
chr7 (143-213)||(27945030-27945100)
chr7 (139-201)||(28155571-28155633)
chr7 (143-201)||(49107822-49107879)
chr7 (146-215)||(2425736-2425805)
chr7 (139-204)||(37870891-37870956)
chr7 (122-179)||(39138467-39138524)
chr7 (133-197)||(1401030-1401094)
chr7 (157-197)||(2424619-2424659)
chr7 (142-215)||(8046030-8046099)
chr7 (153-201)||(23191897-23191945)
chr7 (143-211)||(24339633-24339701)
chr7 (106-194)||(27732207-27732290)
chr7 (107-179)||(41020519-41020591)
[»] chr2 (37 HSPs)
chr2 (139-213)||(31018579-31018653)
chr2 (151-212)||(37411252-37411313)
chr2 (107-195)||(5367199-5367287)
chr2 (151-210)||(21616754-21616813)
chr2 (107-201)||(2438683-2438777)
chr2 (107-213)||(30404814-30404920)
chr2 (143-201)||(44860321-44860379)
chr2 (144-213)||(18276510-18276579)
chr2 (141-201)||(23718027-23718087)
chr2 (141-201)||(24105699-24105759)
chr2 (139-199)||(34691801-34691861)
chr2 (139-199)||(34714213-34714273)
chr2 (153-209)||(36281678-36281734)
chr2 (145-212)||(39279665-39279732)
chr2 (152-202)||(2665897-2665947)
chr2 (145-215)||(18420436-18420506)
chr2 (151-213)||(35449502-35449564)
chr2 (157-215)||(36409641-36409699)
chr2 (107-213)||(38117123-38117229)
chr2 (98-203)||(18570971-18571076)
chr2 (139-179)||(20242723-20242763)
chr2 (139-179)||(20922924-20922964)
chr2 (155-215)||(21148439-21148499)
chr2 (157-213)||(21782832-21782888)
chr2 (153-201)||(28677910-28677958)
chr2 (143-179)||(34784982-34785018)
chr2 (134-194)||(40361745-40361805)
chr2 (151-194)||(30527603-30527646)
chr2 (144-198)||(18889592-18889646)
chr2 (151-201)||(31808078-31808128)
chr2 (96-205)||(34993935-34994038)
chr2 (107-213)||(37558966-37559072)
chr2 (144-201)||(42832277-42832334)
chr2 (143-179)||(18622629-18622665)
chr2 (107-195)||(18840977-18841065)
chr2 (139-199)||(23921256-23921316)
chr2 (122-194)||(29176472-29176544)
[»] chr3 (39 HSPs)
chr3 (151-211)||(32804548-32804608)
chr3 (107-179)||(40993299-40993371)
chr3 (139-199)||(49505150-49505210)
chr3 (139-201)||(7928451-7928513)
chr3 (143-201)||(11313800-11313858)
chr3 (143-211)||(8039835-8039903)
chr3 (139-211)||(8383248-8383320)
chr3 (143-213)||(25948887-25948957)
chr3 (109-178)||(3631708-3631777)
chr3 (139-204)||(4201394-4201459)
chr3 (121-202)||(45451553-45451634)
chr3 (143-211)||(10455781-10455849)
chr3 (143-179)||(15314876-15314912)
chr3 (107-195)||(55401082-55401170)
chr3 (134-201)||(8789541-8789608)
chr3 (129-211)||(8842321-8842402)
chr3 (143-197)||(11665949-11666003)
chr3 (143-201)||(16192750-16192808)
chr3 (134-179)||(35222961-35223006)
chr3 (122-194)||(25093510-25093582)
chr3 (157-201)||(27277852-27277896)
chr3 (146-213)||(4987294-4987361)
chr3 (139-190)||(6780415-6780466)
chr3 (143-201)||(1509540-1509598)
chr3 (155-201)||(10690274-10690320)
chr3 (107-213)||(10954941-10955047)
chr3 (157-211)||(25064900-25064954)
chr3 (143-213)||(28678292-28678362)
chr3 (151-201)||(34307788-34307838)
chr3 (162-215)||(11610508-11610561)
chr3 (153-210)||(12703999-12704056)
chr3 (145-213)||(21720753-21720822)
chr3 (106-179)||(24633364-24633437)
chr3 (142-199)||(38731221-38731278)
chr3 (107-215)||(7171489-7171596)
chr3 (137-213)||(8587015-8587091)
chr3 (151-215)||(13620772-13620836)
chr3 (106-213)||(24205004-24205111)
chr3 (107-213)||(25775497-25775602)
[»] chr8 (44 HSPs)
chr8 (139-210)||(13844592-13844663)
chr8 (107-194)||(33405348-33405435)
chr8 (139-201)||(34897086-34897148)
chr8 (152-210)||(39954288-39954346)
chr8 (151-207)||(20785473-20785529)
chr8 (127-211)||(27101506-27101589)
chr8 (151-210)||(24362210-24362269)
chr8 (151-201)||(14731713-14731763)
chr8 (106-195)||(14134706-14134795)
chr8 (141-213)||(4786336-4786408)
chr8 (139-215)||(31236573-31236649)
chr8 (134-196)||(3025557-3025619)
chr8 (143-213)||(15816129-15816199)
chr8 (107-213)||(31556986-31557091)
chr8 (107-213)||(36450718-36450824)
chr8 (145-194)||(11803267-11803316)
chr8 (144-213)||(20679396-20679465)
chr8 (153-201)||(4611535-4611583)
chr8 (106-210)||(5813584-5813688)
chr8 (145-209)||(7442838-7442902)
chr8 (106-210)||(18407711-18407815)
chr8 (143-179)||(29447467-29447503)
chr8 (137-196)||(8342978-8343037)
chr8 (143-194)||(11927086-11927137)
chr8 (139-194)||(20873077-20873132)
chr8 (139-201)||(12606825-12606887)
chr8 (151-205)||(34222944-34222998)
chr8 (143-201)||(36934671-36934729)
chr8 (107-193)||(40332200-40332286)
chr8 (140-213)||(926785-926858)
chr8 (139-176)||(11833888-11833925)
chr8 (140-213)||(22595983-22596056)
chr8 (141-210)||(30077385-30077454)
chr8 (143-195)||(2572056-2572108)
chr8 (139-195)||(4948659-4948715)
chr8 (145-201)||(7658464-7658520)
chr8 (143-179)||(8847279-8847315)
chr8 (145-201)||(12570736-12570792)
chr8 (155-215)||(24447016-24447076)
chr8 (143-215)||(25172698-25172770)
chr8 (143-179)||(26902175-26902211)
chr8 (151-215)||(27213534-27213598)
chr8 (137-213)||(31109512-31109588)
chr8 (157-213)||(37283824-37283880)
[»] scaffold0697 (1 HSPs)
scaffold0697 (113-210)||(1636-1733)
[»] scaffold0050 (1 HSPs)
scaffold0050 (107-194)||(70286-70373)
[»] scaffold0036 (1 HSPs)
scaffold0036 (143-210)||(9747-9814)
[»] scaffold0123 (1 HSPs)
scaffold0123 (151-201)||(44533-44583)
[»] scaffold0053 (1 HSPs)
scaffold0053 (107-213)||(8787-8893)
[»] scaffold0022 (2 HSPs)
scaffold0022 (107-213)||(90832-90938)
scaffold0022 (143-210)||(99885-99952)
[»] scaffold0020 (1 HSPs)
scaffold0020 (143-201)||(135312-135370)
[»] scaffold0008 (1 HSPs)
scaffold0008 (151-213)||(263380-263442)
[»] scaffold0236 (1 HSPs)
scaffold0236 (143-194)||(25768-25819)
[»] scaffold0004 (1 HSPs)
scaffold0004 (158-213)||(92796-92851)
[»] scaffold0044 (1 HSPs)
scaffold0044 (146-212)||(53170-53236)
[»] scaffold0003 (1 HSPs)
scaffold0003 (143-213)||(241583-241653)
[»] scaffold0103 (1 HSPs)
scaffold0103 (149-213)||(51800-51864)


Alignment Details
Target: chr6 (Bit Score: 159; Significance: 8e-85; HSPs: 62)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 32298458 - 32298679
Alignment:
Q  1 caaaatatagataatgatattagcaacaaaaagggatagccagatcaaaata------taaatttctaaaacactgcttttagaataggacatgaagcat 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |      |||||| |||||||| ||||||||||||||||||||||||||    
T  32298458 caaaatatagataatgatattagcaacaaaaagggatagccagatcaacaaactgtactaaattactaaaacaatgcttttagaataggacatgaagcat 32298557  T
Q  95 ga-cactctttaaattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatt 193  Q
    || ||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32298558 gaacactcatcaaattaggcgtgttctggtgttggacatatgtcatgtctgacaccaacacatataattacactaaattatgtgatgatcttaaattatt 32298657  T
Q  194 agcggtgttggcatgtcagtat 215  Q
    ||||||||||||||||||||||    
T  32298658 agcggtgttggcatgtcagtat 32298679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 7265589 - 7265663
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||||||| ||||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||    
T  7265589 tgtccgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagt 7265663  T

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Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 19040430 - 19040337
Alignment:
Q  124 gttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattc 217  Q
    |||| |||| |||| ||||||||||  ||||||||||||||||| |||||||||||  |||||||||||||||||||| ||| |||||||||||    
T  19040430 gttgaacatgtgtcgtgtccgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtattc 19040337  T

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Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 5732506 - 5732580
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||||||| |||||||||||||||||||| ||||||||  ||||||||||||| |||||| ||| |||||||    
T  5732506 tgtccgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagt 5732580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 9027237 - 9027167
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||| ||||||||||||||||  ||||||||||| ||||||||||||||||||||| ||| |||||||    
T  9027237 cgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagt 9027167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 32511630 - 32511724
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||||||| || | |||  |||||||||| | |||||||||||||| |||||||||||| |||||||||||  ||| ||||||||||||||||    
T  32511630 attaggcgtgctccgatgtcagacatatgtcgtatccgacaccaacacttataattacactgaattatgtgattttcttaaattattagcggtgt 32511724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 96 - 215
Target Start/End: Original strand, 7977783 - 7977902
Alignment:
Q  96 acactctttaaattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 195  Q
    |||||| ||| ||||||||||||  | ||| ||||||||||  ||||||||||| |||| | |||||||||| |||||||| ||  | ||||||||||||    
T  7977783 acactccttagattaggcgtgtttcgttgtcggacatatgttgtgtccgacaccgacacttgtaattacactgaattatgtaattttttcaaattattag 7977882  T
Q  196 cggtgttggcatgtcagtat 215  Q
    | |||| ||| |||||||||    
T  7977883 ctgtgtcggcgtgtcagtat 7977902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 106 - 213
Target Start/End: Complemental strand, 9658975 - 9658868
Alignment:
Q  106 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggc 205  Q
    |||||||||||||| |||||  ||||  |||| ||||  ||||| ||| ||||||||||||| |||||||||||  ||| |||||||||||||||| |||    
T  9658975 aattaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtcggc 9658876  T
Q  206 atgtcagt 213  Q
     |||||||    
T  9658875 gtgtcagt 9658868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 7151471 - 7151409
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggc 205  Q
    ||||||||||||||||||||||||| |||||||||||  | |||||||||||| |||||||||    
T  7151471 cgacaccaacacatataattacacttaattatgtgattttttcaaattattagaggtgttggc 7151409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 34073347 - 34073417
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||| || |||||||||||||| ||||||| |||  |||||||||||||||| |||||||||||||||    
T  34073347 cgacaccgacccatataattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagt 34073417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 31579208 - 31579286
Alignment:
Q  124 gttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 204  Q
    ||||||||| |||| ||||||||||| |||||||  |||||||| |||||||||||  ||||||||||||| |||||||||    
T  31579208 gttggacatgtgtcgtgtccgacaccgacacata--attacactgaattatgtgattttctcaaattattaacggtgttgg 31579286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 7378048 - 7377980
Alignment:
Q  133 atgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||| ||||||||||| ||||||||||||||| | |||||||||||  ||||||||| ||||||||||    
T  7378048 atgtcgtgtccgacaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgt 7377980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 10294166 - 10294094
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 215  Q
    ||||||| ||||||||||||||| | || |||| ||| ||||||||||||||||||| | |||||||||||||    
T  10294166 cgacaccgacacatataattacattgaaatatgcgattatctcaaattattagcggtatcggcatgtcagtat 10294094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 32299705 - 32299753
Alignment:
Q  1 caaaatatagataatgatattagcaac-aaaaagggatagccagatcaa 48  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  32299705 caaaatatagataatgatattagcaacaaaaaagggatagccagatcaa 32299753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 7086852 - 7086801
Alignment:
Q  145 acaccaacacatataattacactaaattatgtgatgatctcaaattattagc 196  Q
    ||||| |||||||||||||||||||||||||||||  |||||||||||||||    
T  7086852 acaccgacacatataattacactaaattatgtgattttctcaaattattagc 7086801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 122 - 213
Target Start/End: Original strand, 17841568 - 17841659
Alignment:
Q  122 gtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||| ||||| ||||| |||||||||||  ||| | ||||||||||||||||||||||  | ||||||||||||| |||| ||| |||||||    
T  17841568 gtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagt 17841659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 96 - 211
Target Start/End: Original strand, 33001242 - 33001357
Alignment:
Q  96 acactctttaaattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 195  Q
    |||||||||  ||||||||| ||  |||||  ||||  |||| ||||||||||| ||||||||||||||| | |||||||||||  | ||||||||||||    
T  33001242 acactctttggattaggcgtatttcggtgtcagacacgtgtcgtgtccgacaccgacacatataattacatttaattatgtgattttttcaaattattag 33001341  T
Q  196 cggtgttggcatgtca 211  Q
    | |||| ||| |||||    
T  33001342 cagtgtcggcgtgtca 33001357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 7996378 - 7996448
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||| || |||||||||||||| |||||| ||||  ||||||||||||||| |||| |||||||||||    
T  7996378 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagt 7996448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 8022423 - 8022353
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||| || |||||||||||||| |||||| ||||  ||||||||||||||| |||| |||||||||||    
T  8022423 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagt 8022353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 9025494 - 9025552
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||| ||||||||||||||||| |||||||||||  ||||||||||||||| ||||    
T  9025494 cgacaccgacacatataattacactgaattatgtgattttctcaaattattagcagtgt 9025552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 10888974 - 10889032
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||| |||||||||||| |||||||||||||||||  | ||||||||||||||||||    
T  10888974 cgacactaacacatataatcacactaaattatgtgattttatcaaattattagcggtgt 10889032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 21924931 - 21924993
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||||||| ||||||||||||||||| |||||| ||||  ||||||||||||||| ||||    
T  21924931 tgtccgacaccgacacatataattacactgaattatttgatattctcaaattattagcagtgt 21924993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 9629443 - 9629374
Alignment:
Q  142 ccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 211  Q
    |||||||| ||||||||||||||| | |||||||||||  |||||||||||| ||||||| ||| |||||    
T  9629443 ccgacaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgtca 9629374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 204
Target Start/End: Original strand, 30866152 - 30866205
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 204  Q
    ||||||||||||||| | |||||||||||  |||||||||||||||||||||||    
T  30866152 acacatataattacattgaattatgtgattttctcaaattattagcggtgttgg 30866205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 216
Target Start/End: Complemental strand, 34172256 - 34172179
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtatt 216  Q
    ||||||||||| ||||||||||||  | | |||||||||||  ||||||||| |||| ||||| ||||||||||||||    
T  34172256 tgtccgacaccgacacatataattttaattaattatgtgattttctcaaattgttagaggtgtcggcatgtcagtatt 34172179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 9195754 - 9195806
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 195  Q
    ||||||| |||||||||||||||||||||||||| ||  ||||||||||||||    
T  9195754 cgacaccgacacatataattacactaaattatgtcattttctcaaattattag 9195806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 10842583 - 10842524
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 210  Q
    |||||||| ||||||||||||||||||||  | |||||||||||||||||| ||| ||||    
T  10842583 acacatatgattacactaaattatgtgattttttcaaattattagcggtgtcggcgtgtc 10842524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 12690512 - 12690437
Alignment:
Q  106 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatga 181  Q
    |||||||||||||||| |||| |||| ||||  ||||||||| | ||||||||||||||| | |||||||| ||||    
T  12690512 aattaggcgtgttctgatgttagacacatgtagtgtccgacatcgacacatataattacattgaattatgttatga 12690437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 21395308 - 21395374
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 210  Q
    ||||||| |||| | ||||||||||||||||||| ||  |||||||||||||||||||||||| ||||    
T  21395308 cgacaccgacacttgtaattacactaaattatgt-attttctcaaattattagcggtgttggcgtgtc 21395374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 7938179 - 7938105
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||| |||||| |||| ||||||||||||||||||| ||||  | ||||||||||||| |||| ||| |||||||    
T  7938179 tgtcggacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagt 7938105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 13364675 - 13364773
Alignment:
Q  113 cgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 211  Q
    ||||| |||||||  ||||| | || ||||| ||||| |||||||| |||||||| |||||| ||||  ||||||||||| ||| |||| |||||||||    
T  13364675 cgtgtcctggtgtcagacatgtatcgtgtccaacaccgacacatatgattacactgaattatatgattttctcaaattataagcagtgtcggcatgtca 13364773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 19044522 - 19044453
Alignment:
Q  144 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||||| ||||||||||| ||||| |||||||||||  ||||||||||||||  |||| ||| |||||||    
T  19044522 gacaccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagt 19044453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 9617493 - 9617437
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggt 199  Q
    ||||||| ||||||||||||||| | |||||||||||  ||||||||||||| ||||    
T  9617493 cgacaccgacacatataattacattgaattatgtgattttctcaaattattaccggt 9617437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 20371110 - 20371178
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 211  Q
    ||||||| ||||||||||| ||| | | |||||||||  |||||||||||||||||||| ||| |||||    
T  20371110 cgacaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgtca 20371178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 21424800 - 21424872
Alignment:
Q  141 tccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||||||||| ||||||||| || | | | |||||||||  | |||||||||||||||||||||| |||||||    
T  21424800 tccgacaccagcacatataaatatattgacttatgtgattttttcaaattattagcggtgttggcgtgtcagt 21424872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 24614473 - 24614413
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggt 199  Q
    ||||||||||||||||||| |||||||||||||||| | ||  | | ||||||||||||||    
T  24614473 tgtccgacaccaacacatacaattacactaaattatataatttttttaaattattagcggt 24614413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 8776964 - 8777043
Alignment:
Q  134 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||| |||||||||||||||| | |||||||||| |||| ||||||  | ||||||||||||  |||| ||| |||||||    
T  8776964 tgtcgtgtccgacaccaacacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagt 8777043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 196
Target Start/End: Original strand, 8805586 - 8805625
Alignment:
Q  157 ataattacactaaattatgtgatgatctcaaattattagc 196  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  8805586 ataattacactaaattatgtgattttctcaaattattagc 8805625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 26562740 - 26562681
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 210  Q
    ||||||||||||||||| |||||||||||  ||||||||| ||||| |||| ||| ||||    
T  26562740 acacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtc 26562681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 201
Target Start/End: Complemental strand, 28715391 - 28715296
Alignment:
Q  106 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||||||||| | ||||| | |||  |||| ||||||||||| |||| | |||||||||| |||||||| ||  | ||||||||||||| ||||    
T  28715391 aattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagccgtgt 28715296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 677896 - 677826
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||||||||| ||||||| ||||||| ||||| ||||  ||||||||||||| | |||| ||| |||||||    
T  677896 cgacaccaacgcatataaatacactatattatatgattttctcaaattattaacagtgtcggcgtgtcagt 677826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 10770674 - 10770744
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||| |||| | |||||||||| |||||||||||  | ||||||||||||  |||||||| |||||||    
T  10770674 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagt 10770744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 13360368 - 13360430
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||| |||||| | ||||||||||||||| |||||||||||  |||||||||| ||| |||||    
T  13360368 tgtctgacaccgaaacatataattacactgaattatgtgattttctcaaattactagtggtgt 13360430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 13689494 - 13689552
Alignment:
Q  145 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttg 203  Q
    |||||||||| ||||||||||| ||||| | ||||  | ||||||||||||||||||||    
T  13689494 acaccaacacgtataattacacgaaattgtatgattttatcaaattattagcggtgttg 13689552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 13851787 - 13851737
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||||||||||||| ||||| || ||  ||||||||||||||||||||    
T  13851787 acacatataattacactgaattacgttattttctcaaattattagcggtgt 13851737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 16766756 - 16766686
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||| |||| | |||||||||| |||||||||||  | ||||||||||||| |||| ||| |||||||    
T  16766756 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagt 16766686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 213
Target Start/End: Original strand, 17341672 - 17341734
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||| |||||||||||| |||||||||||  | ||||||||||| |||||| ||| |||||||    
T  17341672 acacttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagt 17341734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 197
Target Start/End: Complemental strand, 24832639 - 24832593
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcg 197  Q
    ||||||||||||||||||||||||  |||  ||||||||||||||||    
T  24832639 acacatataattacactaaattataagattttctcaaattattagcg 24832593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 26178683 - 26178733
Alignment:
Q  145 acaccaacacatataattacactaaattatgtgatgatctcaaattattag 195  Q
    ||||| |||||||| ||||||||||||||||||||  | ||||||||||||    
T  26178683 acaccgacacatatgattacactaaattatgtgattttatcaaattattag 26178733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 28152193 - 28152088
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 206  Q
    ||||||| ||| | ||||| |||||  |||| ||||||||||| |||| | |||||||||| |||||||||||  | |||||||||||||  ||| |||     
T  28152193 attaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgat-ttttcaaattattagctttgtcggcg 28152095  T
Q  207 tgtcagt 213  Q
    |||||||    
T  28152094 tgtcagt 28152088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 32978863 - 32978933
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtg 177  Q
    ||||| ||||| | ||||| |||||| |||| ||||||||||| |||| | |||||||||| |||||||||    
T  32978863 attagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacacttaattatgtg 32978933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 1532290 - 1532241
Alignment:
Q  152 cacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||||||||||||| |||||||| ||  | ||||||||||||||||||    
T  1532290 cacatataattacactgaattatgtaattttatcaaattattagcggtgt 1532241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 176
Target Start/End: Complemental strand, 4864126 - 4864089
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgt 176  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  4864126 tgtccgacaccaacacatataattaaattaaattatgt 4864089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 5462744 - 5462687
Alignment:
Q  144 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||| ||||| ||||||||||| | |||||||||||  ||||||||||||| ||||||    
T  5462744 gacatcaacatatataattacaatgaattatgtgattttctcaaattattaacggtgt 5462687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 7569172 - 7569229
Alignment:
Q  147 accaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 204  Q
    |||||||| |||||||||||| |||||||| ||  ||||||||||||| | |||||||    
T  7569172 accaacacctataattacactgaattatgtaattttctcaaattattatctgtgttgg 7569229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 10339133 - 10339202
Alignment:
Q  151 acacatataatta-cactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattcat 219  Q
    ||||||||||||| |||| |||||||||||  |||||||||| | ||||||| ||| ||||||| |||||    
T  10339133 acacatataattaacactgaattatgtgattttctcaaattaatcgcggtgtcggcgtgtcagtgttcat 10339202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 34595202 - 34595141
Alignment:
Q  134 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 195  Q
    |||| ||||||||||| |||| | |||||||||| |||||||||||  | ||||||||||||    
T  34595202 tgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 34595141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 179
Target Start/End: Complemental strand, 7027301 - 7027265
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgat 179  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  7027301 cgacaccgacacatataattacactgaattatgtgat 7027265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 195
Target Start/End: Complemental strand, 17302398 - 17302354
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattag 195  Q
    |||||||||||||||| ||||||||||||  ||| ||||||||||    
T  17302398 acacatataattacacaaaattatgtgattttcttaaattattag 17302354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 20518405 - 20518345
Alignment:
Q  142 ccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgtt 202  Q
    |||||||||||||||||||||| ||| | |||||| ||  ||||||||| |||| ||||||    
T  20518405 ccgacaccaacacatataattatactgatttatgtaattttctcaaattgttagtggtgtt 20518345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 34290091 - 34290147
Alignment:
Q  157 ataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||||||| |||||||||||  || |||||||||||  |||| |||||||||||    
T  34290091 ataattacactgaattatgtgattctcgcaaattattagttgtgtcggcatgtcagt 34290147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 34447374 - 34447426
Alignment:
Q  159 aattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 211  Q
    |||||||||||||||| ||||  | ||||||||||| |||||||||| |||||    
T  34447374 aattacactaaattatatgattttatcaaattattaacggtgttggcgtgtca 34447426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 21945598 - 21945492
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 206  Q
    ||||||||||||  ||||| |||||| |||||||||||||||| |||| | |||||||||| |||||||| ||  | ||||||||||||| |||| ||||    
T  21945598 attaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcggca 21945499  T
Q  207 tgtcagt 213  Q
    |||||||    
T  21945498 tgtcagt 21945492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 8423682 - 8423776
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||||||| | ||||| |||||  |||| ||||||||||| |||  |||||||||||| |||||||||||  ||||||||||||||||||||    
T  8423682 attaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacatttataattacactgaattatgtgattttctcaaattattagcggtgt 8423776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 107 - 195
Target Start/End: Original strand, 35157949 - 35158037
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 195  Q
    |||| |||||||| |||||||||||| |||| |||| |||||| |||| ||||||||||||||||||||||||  |  |||||||||||    
T  35157949 attaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacacttataattacactaaattatgtgatttttccaaattattag 35158037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 145 - 213
Target Start/End: Complemental strand, 36635381 - 36635313
Alignment:
Q  145 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||| |||||||||||||||||| |||||||||||  |||||||||||||| ||||||||| |||||||    
T  36635381 acacgaacacatataattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagt 36635313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 15029825 - 15029766
Alignment:
Q  142 ccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||||||||||||||||||||||| |||||||||||  | ||||||||||||| ||||    
T  15029825 ccgacaccaacacatataattacactgaattatgtgatattttcaaattattagcagtgt 15029766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 16189772 - 16189706
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggc 205  Q
    |||||| |||| ||||| ||||||||||| |||||||||||  ||||||||| ||||||||||||||    
T  16189772 tgtccgtcaccgacacacataattacactgaattatgtgattttctcaaatttttagcggtgttggc 16189706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 194
Target Start/End: Complemental strand, 48139346 - 48139272
Alignment:
Q  120 tggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 194  Q
    |||||| | |||| |||| |||| |||| ||||||||||||||||| ||||||||| ||| ||||||||||||||    
T  48139346 tggtgtcgaacatgtgtcgtgtctgacatcaacacatataattacattaaattatgagattatctcaaattatta 48139272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 15659760 - 15659821
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 204  Q
    ||||||||||||||||||||||||  ||||||| |||  ||||||||||||||| |||||||    
T  15659760 cgacaccaacacatataattacaccgaattatgagattttctcaaattattagcagtgttgg 15659821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 211
Target Start/End: Original strand, 23292950 - 23293054
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 206  Q
    ||||||||||| | ||||| |||||  |||| ||||||||||| |||| | |||||| ||| |||||||||||  | ||||||||||||| |||| |||     
T  23292950 attaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcg 23293049  T
Q  207 tgtca 211  Q
    |||||    
T  23293050 tgtca 23293054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 33950199 - 33950135
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttg 203  Q
    |||| |||||| |||||||| |||||| |||||||||||||  ||||||||||||||||| ||||    
T  33950199 tgtctgacaccgacacatatgattacattaaattatgtgattttctcaaattattagcggcgttg 33950135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 179
Target Start/End: Original strand, 40179600 - 40179672
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 179  Q
    |||||||||||  |||||| | |||| |||| ||||||||||| || |||||||||||||| |||||||||||    
T  40179600 attaggcgtgtcatggtgtcgaacatgtgtcgtgtccgacaccgacgcatataattacactgaattatgtgat 40179672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 40613501 - 40613441
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 211  Q
    ||||||||||||||||| |||||||||||  ||||||| |||||||||||| ||| |||||    
T  40613501 acacatataattacactgaattatgtgattttctcaaaatattagcggtgtcggcgtgtca 40613441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 42015024 - 42014972
Alignment:
Q  137 catgtccgacaccaacacatataattacact-aaattatgtgatgatctcaaa 188  Q
    ||||||||||||||||||||||||||||||| || ||||||||| ||||||||    
T  42015024 catgtccgacaccaacacatataattacactgaatttatgtgattatctcaaa 42014972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 7214523 - 7214582
Alignment:
Q  144 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttg 203  Q
    |||||| || |||||||||||| |||||||||||||  |||||||||||||| |||||||    
T  7214523 gacaccgacgcatataattacattaaattatgtgattttctcaaattattagtggtgttg 7214582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 194
Target Start/End: Original strand, 12895238 - 12895325
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 194  Q
    ||||||||||| | | ||| ||| | ||||| ||||||||||| |||| ||||||||||| ||||||||||||  | |||||||||||    
T  12895238 attaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacacttataattacacaaaattatgtgattttttcaaattatta 12895325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 204
Target Start/End: Complemental strand, 29205525 - 29205442
Alignment:
Q  121 ggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 204  Q
    ||||| |||||| |||| ||||| ||||| |||| | |||||||||| |||||||||||  | ||||||||||||| |||||||    
T  29205525 ggtgtcggacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtgattttttcaaattattagccgtgttgg 29205442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 5775359 - 5775409
Alignment:
Q  144 gacaccaacacatataattacactaaattatgtgatgatctcaaattatta 194  Q
    |||||| ||||||||||||||||| |||||||||||  |||||||||||||    
T  5775359 gacaccgacacatataattacacttaattatgtgattttctcaaattatta 5775409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 211
Target Start/End: Complemental strand, 49431118 - 49431016
Alignment:
Q  110 aggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtga-tgatctcaaattattagcggtgttggcatg 208  Q
    |||||||| | |||||||||||  |||| ||||||||||| |||| | |||||||||| |||||||||| |  | ||||||||||||| |||| ||| ||    
T  49431118 aggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtcggcgtg 49431019  T
Q  209 tca 211  Q
    |||    
T  49431018 tca 49431016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 22440609 - 22440658
Alignment:
Q  152 cacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||||||||||||| |||||||||||  ||||||||||||| ||||||    
T  22440609 cacatataattacactgaattatgtgattttctcaaattattaacggtgt 22440658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 54580014 - 54580075
Alignment:
Q  134 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 195  Q
    |||| ||||||||||| |||| |||||||||||| |||||||||||  | ||||||||||||    
T  54580014 tgtcgtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattattag 54580075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 18576038 - 18576086
Alignment:
Q  144 gacaccaacacatataattacactaaattatgtgatgatctcaaattat 192  Q
    |||||||||||||||||||||||  |||||||||||  |||||||||||    
T  18576038 gacaccaacacatataattacaccgaattatgtgattttctcaaattat 18576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 903971 - 903924
Alignment:
Q  153 acatataattacactaaattatgtgatgatctcaaattattagcggtg 200  Q
    ||||||||||||||| |||||||||||  ||||||||||||| |||||    
T  903971 acatataattacactgaattatgtgattttctcaaattattaacggtg 903924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 4157553 - 4157459
Alignment:
Q  86 atgaagcat-gacactctttaaattaggcgtgttct-ggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 179  Q
    ||||||||| ||||||| |  |||||||||| |||| ||||| |||||| |||| ||||||||||| |||| | ||||| ||||||||||||||||    
T  4157553 atgaagcatagacactcctcgaattaggcgt-ttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgat 4157459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 179
Target Start/End: Original strand, 10499267 - 10499306
Alignment:
Q  140 gtccgacaccaacacatataattacactaaattatgtgat 179  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  10499267 gtccgacactgacacatataattacactaaattatgtgat 10499306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 213
Target Start/End: Original strand, 35723392 - 35723455
Alignment:
Q  151 acacatataattacactaaattatgtg-atgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||||||||||| | ||||||||| ||  |||||||||||||||||||| ||| |||||||    
T  35723392 acacatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagt 35723455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 40784016 - 40783965
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 194  Q
    |||||||||||||||| ||||| || |||||||| || ||||||||||||||    
T  40784016 cgacaccaacacatatgattacgctgaattatgttattatctcaaattatta 40783965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 197
Target Start/End: Original strand, 999356 - 999402
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcg 197  Q
    |||||||||||||||||||||||| ||||   |||||||||||||||    
T  999356 acacatataattacactaaattatatgatttactcaaattattagcg 999402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 2361971 - 2362033
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||||||| |||| | ||||||||||||||||||| ||  | ||||||||||||| ||||    
T  2361971 tgtccgacaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgt 2362033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 4157230 - 4157172
Alignment:
Q  121 ggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 179  Q
    ||||| |||||| |||| ||||||||||| |||| | ||||| ||||||||||||||||    
T  4157230 ggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgat 4157172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 9996935 - 9996849
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatt 193  Q
    |||||| ||||||  |||| |||||  ||| ||||| |||||| | ||||||||||| ||| |||||||||||  ||||||||||||    
T  9996935 attaggtgtgttccagtgtcggacacgtgttatgtctgacaccgagacatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 13134501 - 13134451
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||||||||||||||||||||||||||  ||| ||||||| ||| ||||    
T  13134501 acacatataattacactaaattatgtgattttcttaaattataagcagtgt 13134451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 13783340 - 13783282
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||||  |||||||||||||||| |||| ||||||  |||||||| |||||||||||    
T  13783340 cgacaccggcacatataattacactgaattttgtgatcttctcaaataattagcggtgt 13783282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 21539879 - 21539937
Alignment:
Q  155 atataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||||||||||||||||||| ||||  ||| |||||||||  ||||| |||||||||||    
T  21539879 atataattacactaaattatatgattttcttaaattattaatggtgtcggcatgtcagt 21539937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 11931331 - 11931274
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatg 208  Q
    ||||||||| |||||||||||||||||||  | ||| ||||||| |||||| ||||||    
T  11931331 acacatatatttacactaaattatgtgattttttcatattattaacggtgtcggcatg 11931274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 196
Target Start/End: Original strand, 28964212 - 28964301
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagc 196  Q
    ||||||||||| |  |||| ||| || |||| ||||||||||  |||| | |||||||||| |||||||||||  | |||||||||||||    
T  28964212 attaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatgtgattttttcaaattattagc 28964301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 193
Target Start/End: Original strand, 30103342 - 30103406
Alignment:
Q  128 gacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatt 193  Q
    |||||||||| |||  |||||| |||||||| |||||||||| |||||||||  ||||||||||||    
T  30103342 gacatatgtcgtgtttgacaccgacacatatgattacactaa-ttatgtgattttctcaaattatt 30103406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 30522920 - 30522973
Alignment:
Q  148 ccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||| ||||| ||||||| |||||||||||  |||||||| |||||||||||    
T  30522920 ccaacatatatagttacactgaattatgtgattttctcaaataattagcggtgt 30522973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 30982878 - 30982935
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtg 200  Q
    ||||||| |||| |||||||||||| || ||||||||  |||||||| ||||||||||    
T  30982878 cgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagcggtg 30982935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 194
Target Start/End: Original strand, 36386205 - 36386262
Alignment:
Q  137 catgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 194  Q
    |||||||||||||||||| | |||||||||| ||||||||  |  |||||||||||||    
T  36386205 catgtccgacaccaacacctttaattacactgaattatgtccttttctcaaattatta 36386262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 3731250 - 3731190
Alignment:
Q  155 atataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 215  Q
    |||||||||| ||||||||||||||  ||||||||||| | || | ||||| |||||||||    
T  3731250 atataattaccctaaattatgtgattttctcaaattatcaacgttattggcgtgtcagtat 3731190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 5527234 - 5527174
Alignment:
Q  155 atataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 215  Q
    |||||||||| ||||||||||||||  ||||||||||| | || | ||||| |||||||||    
T  5527234 atataattaccctaaattatgtgattctctcaaattatcaacgttattggcgtgtcagtat 5527174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 46083991 - 46084027
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgat 179  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  46083991 cgacaccgacacatataattacactagattatgtgat 46084027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 2e-20; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 6427409 - 6427339
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||||||||||||||||||| | |||||||||||  |||||||||||||||||||||||| |||||||    
T  6427409 cgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagt 6427339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 139 - 210
Target Start/End: Original strand, 14332638 - 14332709
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 210  Q
    ||||||||||| | |||||||||||||||||||||||||||  |||||||||||||| ||||| ||||||||    
T  14332638 tgtccgacaccgagacatataattacactaaattatgtgattttctcaaattattagtggtgtgggcatgtc 14332709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 9709883 - 9709809
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||||||| |||||||||||||||   |||||||||||  |||||||||||||||||||| |||||||||||    
T  9709883 tgtccgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgtaggcatgtcagt 9709809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 122 - 213
Target Start/End: Complemental strand, 36878541 - 36878450
Alignment:
Q  122 gtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||| |||||| | || |||| |||||| |||| |||||||||||| |||||||||||  |||||||||||||||||||| ||| |||||||    
T  36878541 gtgtcggacatgtttcgtgtcagacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 36878450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 213
Target Start/End: Original strand, 8842666 - 8842784
Alignment:
Q  95 gacactctttaaattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 194  Q
    |||||||||| |||||||||||| ||| ||| ||| |  |||| ||||||||||||| ||||||||||||| |||||||| || |  |||||||||| ||    
T  8842666 gacactctttgaattaggcgtgtcctgatgtcggatacgtgtcgtgtccgacaccaatacatataattacattaaattatatgtttttctcaaattacta 8842765  T
Q  195 gcggtgttggcatgtcagt 213  Q
    | ||||  ||| |||||||    
T  8842766 gtggtgccggcgtgtcagt 8842784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 38078625 - 38078719
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||||||| ||||||||| |||| |||| ||||||||||| |||| | |||||||| | |||||||||||  | ||||||||||||| ||||    
T  38078625 attaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgt 38078719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 39953142 - 39953204
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||||||| ||||||| |||||||||||||||||||||  ||| ||||||||||||||||    
T  39953142 tgtccgacaccgacacatacaattacactaaattatgtgattttctaaaattattagcggtgt 39953204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 40181966 - 40181872
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||||||| | ||||| |||||  |||  ||||||||||| | ||||||||||||||| |||||||||||  ||||||||||||||| ||||    
T  40181966 attaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccgatacatataattacactgaattatgtgattttctcaaattattagcagtgt 40181872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 2896105 - 2896191
Alignment:
Q  127 ggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||| ||||| |||| |||||| ||| |||||  |||||| |||||||||||  |||||||||||||||||||| ||| |||||||    
T  2896105 ggacacatgtcgtgtctgacaccgacatatatagctacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 2896191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 5898230 - 5898324
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||| ||||| | |||||||||||  |||| |||| |||||| || |||||||||||||| |||||||||||  | ||| ||||||||||||||    
T  5898230 attagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgacgcatataattacactgaattatgtgattttttcagattattagcggtgt 5898324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 201
Target Start/End: Complemental strand, 13436521 - 13436459
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||||||||||||||||||||||||| |||||||||||   || ||||||||||| ||||    
T  13436521 tgtccgacaccaacacatataattacactgaattatgtgatttccttaaattattagcagtgt 13436459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 22515851 - 22515945
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||||||||   ||||| ||| || |||| ||||||||||| |||| | ||||||||||||||||||||||  | ||||||||||||| ||||    
T  22515851 attaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 22515945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 41877466 - 41877528
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||||||| |||| | ||||||||||||||||||| ||  ||||||||||||||||||||    
T  41877466 tgtccgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgt 41877528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 21530778 - 21530681
Alignment:
Q  113 cgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 210  Q
    ||||| || |||| |||||| |||| ||||||||||| |||| |||||||| || ||||||| ||||  ||||||||||||| |||||| ||| ||||    
T  21530778 cgtgtcctagtgtcggacatgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgtgtc 21530681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 213
Target Start/End: Complemental strand, 36906051 - 36905986
Alignment:
Q  148 ccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||||||||||||| || |||||||||||  ||||| |||||||||||||||||  |||||||    
T  36906051 ccaacacatataattactctgaattatgtgattttctcagattattagcggtgttggtgtgtcagt 36905986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 28674880 - 28674800
Alignment:
Q  122 gtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgtt 202  Q
    ||||||||||  |||| |||| |||||||||| ||||||||| ||| |||||||| ||  ||||||||||||| |||||||    
T  28674880 gtgttggacaagtgtcgtgtctgacaccaacatatataattatactgaattatgtaattttctcaaattattaacggtgtt 28674800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 46348361 - 46348453
Alignment:
Q  121 ggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||| |||||  |||| ||||||||||| |||| | ||||||||||||||||| ||||  | ||||||||||||| |||| ||| |||||||    
T  46348361 ggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagt 46348453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 1864876 - 1864931
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 194  Q
    ||||| ||||| ||||||||||||||||| |||||||||||  |||||||||||||    
T  1864876 tgtccaacaccgacacatataattacactgaattatgtgattttctcaaattatta 1864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 22881607 - 22881686
Alignment:
Q  134 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||| ||||||||||| |||| | ||||||||||||||||||||||  | ||||||||||||  |||| ||| |||||||    
T  22881607 tgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagt 22881686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 25098563 - 25098622
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 210  Q
    ||||||||||||||||| |||||||||||  ||||||||||| |||||||| ||| ||||    
T  25098563 acacatataattacactgaattatgtgattttctcaaattatcagcggtgtcggcttgtc 25098622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 27471567 - 27471622
Alignment:
Q  144 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggt 199  Q
    ||||||||||||| |||||||||| ||||||||| |  ||||||||||||||||||    
T  27471567 gacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagcggt 27471622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 194
Target Start/End: Original strand, 40258897 - 40258984
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 194  Q
    ||||||||||| ||||||| |||||  |||| |||| |||||| |||| | |||||||||| |||||||||||  | |||||||||||    
T  40258897 attaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 40258984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 198
Target Start/End: Complemental strand, 44482289 - 44482234
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcgg 198  Q
    ||||||| ||||||||||||||||| |||||||||||  ||||||||||| |||||    
T  44482289 cgacaccgacacatataattacactgaattatgtgattttctcaaattataagcgg 44482234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 213
Target Start/End: Original strand, 398773 - 398835
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||| |||||||||||| |||||||||||  | |||||||||||||||||| ||| |||||||    
T  398773 acacctataattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagt 398835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 5927324 - 5927410
Alignment:
Q  127 ggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||||| |||||||||||||||  |||| | |||||||| |||||||| ||||  | ||||||||||||| ||||| || |||||||    
T  5927324 ggacatttgtcatgtccgacactgacacttgtaattacattaaattatatgattttttcaaattattagcagtgttagcgtgtcagt 5927410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 145 - 219
Target Start/End: Original strand, 10572591 - 10572665
Alignment:
Q  145 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattcat 219  Q
    ||||| |||||| |||||||||  |||||||||||  |||||||||||||| ||||| ||| ||||||| |||||    
T  10572591 acaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgttcat 10572665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 12713329 - 12713379
Alignment:
Q  145 acaccaacacatataattacactaaattatgtgatgatctcaaattattag 195  Q
    ||||||| |||||||||||||||||||||||||||  ||| ||||||||||    
T  12713329 acaccaatacatataattacactaaattatgtgattttcttaaattattag 12713379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 12717420 - 12717470
Alignment:
Q  145 acaccaacacatataattacactaaattatgtgatgatctcaaattattag 195  Q
    ||||||| |||||||||||||||||||||||||||  ||| ||||||||||    
T  12717420 acaccaatacatataattacactaaattatgtgattttcttaaattattag 12717470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 13997978 - 13997872
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 206  Q
    ||||| |||||  ||||||| ||||| |||| | ||| ||||| ||||||||||||||||| |||||||||||  | | |||| |||| |||||| |||     
T  13997978 attagacgtgtcatggtgtttgacatgtgtcgtctccaacaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcg 13997879  T
Q  207 tgtcagt 213  Q
    |||||||    
T  13997878 tgtcagt 13997872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 213
Target Start/End: Original strand, 17831539 - 17831601
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||||||| |||||||| ||| |||||||  |||||||||||||||||||| ||| |||||||    
T  17831539 acacatatgattacactgaataatgtgattttctcaaattattagcggtgtcggcgtgtcagt 17831601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 20157350 - 20157408
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||| |||||||| |||||||| |||||||||||  ||||| ||||||||||||||    
T  20157350 cgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgt 20157408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 34371772 - 34371715
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||| ||||||||||||||||| |||||||||||  |||| |||||||||||||||    
T  34371772 cgacaccgacacatataattacactgaattatgtgattttctc-aattattagcggtgt 34371715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 10233304 - 10233251
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 204  Q
    ||||||||||||||||| |||||||||||  |||||| ||||||| ||||||||    
T  10233304 acacatataattacactgaattatgtgattttctcaatttattagtggtgttgg 10233251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 19562622 - 19562691
Alignment:
Q  144 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||||| ||||||||||||||||| || |||| |||  ||||||||||||||| |||| ||| |||||||    
T  19562622 gacacctacacatataattacactgaactatgagattttctcaaattattagcagtgtcggcgtgtcagt 19562691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 25452162 - 25452215
Alignment:
Q  157 ataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 210  Q
    ||||||||||| ||||||| |||  ||||||||||||||| |||||||||||||    
T  25452162 ataattacactgaattatgagattttctcaaattattagcagtgttggcatgtc 25452215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 29229527 - 29229462
Alignment:
Q  137 catgtccgacaccaacacatataattac-actaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||| |||||||| |||||||||||||| ||||||| |||||||  ||||||||||||||| ||||    
T  29229527 catgcccgacaccgacacatataattaccactaaatcatgtgattttctcaaattattagcagtgt 29229462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 196
Target Start/End: Original strand, 34712391 - 34712436
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagc 196  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||    
T  34712391 acacatataattacactaaattatgttattttctcaaattattagc 34712436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 201
Target Start/End: Original strand, 38075911 - 38076028
Alignment:
Q  86 atgaagcatg-acactctttaaattaggcgtgttctggtgttggacatatgtc-atgtccgacaccaacacatataattacactaaattatgtgatgatc 183  Q
    |||||||||| |||||| | ||||||||||||| | ||||| || || |  || |||||||||||| |||||||| |||||||| | |||||||||   |    
T  38075911 atgaagcatgtacactcctcaaattaggcgtgtcccggtgtcggtcacacatcgatgtccgacaccgacacatatgattacactgacttatgtgatttac 38076010  T
Q  184 tcaaattattagcggtgt 201  Q
    ||||||||||||| ||||    
T  38076011 tcaaattattagcagtgt 38076028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 38503378 - 38503321
Alignment:
Q  144 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||| ||||||||||||||||| || ||| ||||  ||||||||||||||||||||    
T  38503378 gacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgt 38503321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 1486709 - 1486781
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 215  Q
    ||||||| |||| |||||||||||| |||||||||||  | ||||||||||||| ||||  || |||||||||    
T  1486709 cgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtat 1486781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 1815352 - 1815280
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 179  Q
    ||||||||||| | ||||| |||||| |||| |||| |||||| |||| | |||||||||| |||||||||||    
T  1815352 attaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacacttgtaattacactgaattatgtgat 1815280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 195
Target Start/End: Original strand, 7918219 - 7918263
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattag 195  Q
    ||||||||||||||||| |||||||||||  ||||||||||||||    
T  7918219 acacatataattacactgaattatgtgattttctcaaattattag 7918263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 30749903 - 30749863
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgat 179  Q
    ||||||||||| ||||||||||||||||| |||||||||||    
T  30749903 tgtccgacaccgacacatataattacactgaattatgtgat 30749863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 30771354 - 30771314
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgat 179  Q
    ||||||||||| ||||||||||||||||| |||||||||||    
T  30771354 tgtccgacaccgacacatataattacactgaattatgtgat 30771314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 195
Target Start/End: Original strand, 42359413 - 42359501
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 195  Q
    ||||||||||| | ||||| ||||| | ||| ||||||||||| |||| | |||||||||| |||| ||||||  | ||||||||||||    
T  42359413 attaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaattattag 42359501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 9828103 - 9828036
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 210  Q
    ||||||| ||||||| ||||||||| |||||||||||  | |||||||||||| ||||| ||| ||||    
T  9828103 cgacaccgacacataaaattacactgaattatgtgattttatcaaattattagtggtgtcggcgtgtc 9828036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 12443469 - 12443532
Alignment:
Q  152 cacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 215  Q
    |||||| ||||||||| |||||||||||  ||||||||||||||| |||| ||| |||| ||||    
T  12443469 cacatacaattacactgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtat 12443532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 190
Target Start/End: Complemental strand, 25272541 - 25272494
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaatt 190  Q
    ||||||| |||| ||||||||||||||||||||||||  |||||||||    
T  25272541 cgacaccgacacttataattacactaaattatgtgattttctcaaatt 25272494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 174
Target Start/End: Original strand, 39130763 - 39130798
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattat 174  Q
    ||||||||||| ||||||||||||||||||||||||    
T  39130763 tgtccgacaccgacacatataattacactaaattat 39130798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 222
Target Start/End: Original strand, 40285662 - 40285733
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattcatctc 222  Q
    |||||||| | |||||| ||||||| |||  |||||||||||||||||||||||  ||||||| | ||||||    
T  40285662 acacatatgactacactgaattatgcgattttctcaaattattagcggtgttggtgtgtcagtgtccatctc 40285733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 210
Target Start/End: Original strand, 43492458 - 43492561
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 206  Q
    ||||||||||| | ||||| |||||| |||  |||| |||||| ||||| ||||||||||  ||||| |||||  |||||||||| ||| ||||| |||     
T  43492458 attaggcgtgtgccggtgtcggacatgtgttgtgtctgacaccgacacacataattacaccgaattacgtgattttctcaaattactagtggtgtcggcg 43492557  T
Q  207 tgtc 210  Q
    ||||    
T  43492558 tgtc 43492561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 48450602 - 48450657
Alignment:
Q  158 taattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||||||||||||||| ||  | ||||||||||||| |||||||| |||||||    
T  48450602 taattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagt 48450657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 176
Target Start/End: Original strand, 7353484 - 7353526
Alignment:
Q  134 tgtcatgtccgacaccaacacatataattacactaaattatgt 176  Q
    |||||||| ||||||| ||| ||||||||||||||||||||||    
T  7353484 tgtcatgttcgacaccgacatatataattacactaaattatgt 7353526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 18556456 - 18556526
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||||| || | |||||||| |||||||||||||  | ||||||||||||| |||| ||| |||||||    
T  18556456 cgacaccaatacttgtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagt 18556526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 25361937 - 25361887
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||||||||||||| |||||||||||  ||||||||||| || |||||    
T  25361937 acacatataattacactgaattatgtgattttctcaaattatcagtggtgt 25361887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 31667487 - 31667409
Alignment:
Q  140 gtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattca 218  Q
    |||||||||| |||||| | |||||| | |||||||| ||  ||| ||||||||| | |||||| ||||||||||||||    
T  31667487 gtccgacaccgacacatgtgattacatttaattatgtcattttctaaaattattaccagtgttgacatgtcagtattca 31667409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 35702584 - 35702658
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||||||  |||| | |||||||||| |||||| ||| | | ||||||||||||| |||| |||||||||||    
T  35702584 tgtccgacactgacacttgtaattacacttaattatttgaagttttcaaattattagctgtgtcggcatgtcagt 35702658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 35999320 - 35999374
Alignment:
Q  141 tccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 195  Q
    ||||||| ||||||||||||||| |||||||||| ||||  ||| ||||||||||    
T  35999320 tccgacatcaacacatataattatactaaattatatgattttcttaaattattag 35999374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 41017405 - 41017455
Alignment:
Q  144 gacaccaacacatataattacactaaattatgtgatgatctcaaattatta 194  Q
    |||||||||| ||||||||||| |||||||||| ||  |||||||||||||    
T  41017405 gacaccaacatatataattacattaaattatgtcattttctcaaattatta 41017455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 42325616 - 42325558
Alignment:
Q  146 caccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 204  Q
    |||||||||||||  ||||||| |||||||| ||  ||||||||||||| |||||||||    
T  42325616 caccaacacatattgttacactgaattatgtcattttctcaaattattatcggtgttgg 42325558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 113358 - 113289
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcag 212  Q
    ||||||| |||| | |||||||||| |||||||||||  | ||||||||||||| |||| ||| ||||||    
T  113358 cgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 19324612 - 19324563
Alignment:
Q  152 cacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||||||||||||| |||||||||||  ||||||||||| ||| ||||    
T  19324612 cacatataattacactgaattatgtgattttctcaaattatcagcagtgt 19324563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 34298482 - 34298437
Alignment:
Q  156 tataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||||||||| |||||||||||  |||||||||||||| |||||    
T  34298482 tataattacactgaattatgtgattttctcaaattattagtggtgt 34298437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 16927186 - 16927238
Alignment:
Q  144 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagc 196  Q
    |||||||||| ||||||||||||| |||||| ||||  | |||||||||||||    
T  16927186 gacaccaacatatataattacactgaattatatgattttttcaaattattagc 16927238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 23738735 - 23738679
Alignment:
Q  145 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||||||||| ||||| |||| |||||||||||  | ||||||||||||| ||||    
T  23738735 acaccaacacatttaattgcactgaattatgtgattttttcaaattattagctgtgt 23738679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 210
Target Start/End: Original strand, 29163372 - 29163448
Alignment:
Q  134 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 210  Q
    |||| ||||||||||| ||||||||||||| | | |||||||||||  ||  ||||| |||||||||| ||| ||||    
T  29163372 tgtcgtgtccgacaccgacacatataattaaattgaattatgtgattttcctaaatttttagcggtgtcggcgtgtc 29163448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 52903312 - 52903272
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgat 179  Q
    ||||||||||| ||||||||||||||||| |||||| ||||    
T  52903312 tgtccgacaccgacacatataattacactgaattatatgat 52903272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 4e-19; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 30502367 - 30502447
Alignment:
Q  122 gtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgtt 202  Q
    |||| |||||| |||| ||||||||||| ||||||||||||||||| ||||| |||||  |||||||||||||||||||||    
T  30502367 gtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgtt 30502447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 30542710 - 30542790
Alignment:
Q  122 gtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgtt 202  Q
    |||| |||||| |||| ||||||||||| ||||||||||||||||| ||||| |||||  |||||||||||||||||||||    
T  30542710 gtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgtt 30542790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 134 - 209
Target Start/End: Original strand, 16203786 - 16203861
Alignment:
Q  134 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgt 209  Q
    |||| ||||||||||| ||||||||||||||||||||||||| |||  ||||||||||||||| |||| |||||||    
T  16203786 tgtcttgtccgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcggcatgt 16203861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 3966562 - 3966492
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||| ||||||||||||||||| |||| ||||||  |||||||||||||||||||| |||||||||||    
T  3966562 cgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagt 3966492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 11685998 - 11685928
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||| ||||||||||||||||||||||||| ||   |||||||||||||||||||| |||||||||||    
T  11685998 cgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcggcatgtcagt 11685928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 86 - 211
Target Start/End: Original strand, 28588616 - 28588742
Alignment:
Q  86 atgaagcatg-acactctttaaattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatct 184  Q
    |||||||||| ||||||||   |||| |||||| |||||||  || || |||| ||||||||||| |||| |||||||||||| |||||||||||  |||    
T  28588616 atgaagcatggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataattacactgaattatgtgattttct 28588715  T
Q  185 caaattattagcggtgttggcatgtca 211  Q
    |||||||||| |||||| ||| |||||    
T  28588716 caaattattaccggtgtcggcgtgtca 28588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 213
Target Start/End: Complemental strand, 27144514 - 27144452
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||||| ||| |||||||    
T  27144514 acacatataattacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtcagt 27144452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 36838602 - 36838544
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  36838602 cgacaccgacacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 43564976 - 43564904
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 179  Q
    ||||||||||| | || || ||||| ||||| ||||||||||| |||| ||||||||||||||||||||||||    
T  43564976 attaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacactaaattatgtgat 43564904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 106 - 201
Target Start/End: Complemental strand, 27932331 - 27932236
Alignment:
Q  106 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||||||||| |||||||  ||||  |||| ||||||||||||| |  | |||||||||| |||||||| ||  ||||||||||||||||||||    
T  27932331 aattaggcgtgtcctggtgtccgacacgtgtcgtgtccgacaccaagatttgtaattacactgaattatgtaattttctcaaattattagcggtgt 27932236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 6471889 - 6471947
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||| ||||||||||||||||| |||||||||||  ||||||||||||||| ||||    
T  6471889 cgacacccacacatataattacactgaattatgtgattttctcaaattattagccgtgt 6471947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 213
Target Start/End: Original strand, 12264837 - 12264899
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||||||||||||| ||| |||| ||  |||||||| |||||||||||||||||||||||    
T  12264837 acacatataattacactgaatcatgtaattttctcaaataattagcggtgttggcatgtcagt 12264899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 21191020 - 21191126
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 206  Q
    ||||||||||| | || || |||||  |||  ||||||||||| |||| | |||||||||| |||||||||||  | ||||||||||||| |||| ||||    
T  21191020 attaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggca 21191119  T
Q  207 tgtcagt 213  Q
    |||||||    
T  21191120 tgtcagt 21191126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 23221047 - 23220973
Alignment:
Q  138 atgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcag 212  Q
    |||||| ||||| |||||||| || |||||||||||||||||  | |||||||||||||||||| | ||||||||    
T  23221047 atgtccaacaccgacacatatgataacactaaattatgtgattttatcaaattattagcggtgtcgacatgtcag 23220973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 23012393 - 23012461
Alignment:
Q  128 gacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagc 196  Q
    ||||| |||| ||||| ||||| ||||||||||||||| |||||||| ||||  |||||||||||||||    
T  23012393 gacatgtgtcgtgtccaacaccgacacatataattacattaaattatatgattttctcaaattattagc 23012461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 12927722 - 12927659
Alignment:
Q  134 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcg 197  Q
    ||||||||| |||||  ||| |||||||||||||||||||| ||||  ||||||||||||||||    
T  12927722 tgtcatgtctgacactgacatatataattacactaaattatatgattttctcaaattattagcg 12927659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 213
Target Start/End: Complemental strand, 17123128 - 17123037
Alignment:
Q  122 gtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||| |||||| | || ||||| ||||| ||| ||||||||  |||  ||||||||||  |||||||||||||||||||||||| |||||||    
T  17123128 gtgtcggacatgtttcgtgtccaacaccgacatatataattgtacttgattatgtgattttctcaaattattagcggtgttggcgtgtcagt 17123037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 18421825 - 18421899
Alignment:
Q  127 ggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||| |||| |||||||| || |||||||||||||||||  ||||||||||  ||||||||||| ||| ||||    
T  18421825 ggacatgtgtcgtgtccgacgccgacacatataattacactggattatgtgattttctcaaattatcagcagtgt 18421899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 39205939 - 39205881
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||||||||||||||||||||  |||||| ||||  ||||||||||||||| ||||    
T  39205939 cgacaccaacacatataattacacctaattatatgattttctcaaattattagcagtgt 39205881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 199
Target Start/End: Original strand, 17593725 - 17593778
Alignment:
Q  146 caccaacacatataattacactaaattatgtgatgatctcaaattattagcggt 199  Q
    |||||||| ||||||||||||| ||||| |||||  ||||||||||||||||||    
T  17593725 caccaacatatataattacactgaattacgtgattttctcaaattattagcggt 17593778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 35017085 - 35017044
Alignment:
Q  154 catataattacactaaattatgtgatgatctcaaattattag 195  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  35017085 catataattacactaaattatgtgattttctcaaattattag 35017044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 14873575 - 14873527
Alignment:
Q  144 gacaccaacacatataattacactaaattatgtgatgatctcaaattat 192  Q
    |||||| ||||||||||||||||||||||||||| |  |||||||||||    
T  14873575 gacaccgacacatataattacactaaattatgtgcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 201
Target Start/End: Complemental strand, 42893477 - 42893361
Alignment:
Q  86 atgaagcatg-acactctttaaattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatct 184  Q
    |||||||||| |||||| | | ||||||||||| ||||||| |||||  |||  |||| |||||| |||| | ||||||||||  ||||||||||  | |    
T  42893477 atgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgacacttgtaattacactggattatgtgatttttt 42893378  T
Q  185 caaattattagcggtgt 201  Q
    |||||||||||| ||||    
T  42893377 caaattattagctgtgt 42893361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 14674313 - 14674258
Alignment:
Q  158 taattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||||||||||||||||||  | ||||||||||||| |||| ||| |||||||    
T  14674313 taattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagt 14674258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 21576736 - 21576807
Alignment:
Q  134 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggc 205  Q
    |||| ||||||||| | |||| | |||||||||| |||||||||||  | ||||||||||||| ||||||||    
T  21576736 tgtcgtgtccgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgttggc 21576807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 24906292 - 24906371
Alignment:
Q  134 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||||||||||| ||| |||| | |||||||||| |||||||| ||  | ||||||||||| | |||||||| |||||||    
T  24906292 tgtcatgtccgataccgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagt 24906371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 6035541 - 6035472
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||| ||| ||||||||||||| |||||| | ||  |||||||||||||||||||| ||| |||||||    
T  6035541 cgacaccgacaaatataattacactgaattatattatt-tctcaaattattagcggtgtcggcgtgtcagt 6035472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 6247685 - 6247611
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||||||| |||| | |||||||||| |||||||||||  | ||||||||||||  |||| ||| |||||||    
T  6247685 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagt 6247611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 19579760 - 19579702
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||| |||| | ||||| ||||||||||||||||  ||||||||||||||| ||||    
T  19579760 cgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgt 19579702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 26312832 - 26312758
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||||||| | ||||||||||||||| |||||  ||||  |||||||||||| ||||| | ||||| |||||    
T  26312832 tgtccgacaccgatacatataattacactgaattaattgattttctcaaattatttgcggtatcggcatatcagt 26312758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 32766943 - 32767001
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||| |||||||||||||||| | |||| || |||  ||||||||||||||||||||    
T  32766943 cgacacaaacacatataattacattgaattgtgcgattttctcaaattattagcggtgt 32767001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 33178088 - 33178014
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||||||| |||| | ||||||||||||||||||||||  | | ||||||||||  |||| ||| |||||||    
T  33178088 tgtccgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtcagt 33178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 41091265 - 41091315
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||||||||||||| |||||||||||  |||||||| |||||| ||||    
T  41091265 acacatataattacactgaattatgtgattttctcaaatcattagcagtgt 41091315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 196
Target Start/End: Original strand, 21194087 - 21194176
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagc 196  Q
    ||||||||||  | |||||  ||||| |||| ||||| ||||||| || |||||||||||| ||| |||||||  |||||||||| ||||    
T  21194087 attaggcgtgccccggtgtctgacatgtgtcgtgtccaacaccaatacctataattacactgaatgatgtgattttctcaaattactagc 21194176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 210
Target Start/End: Original strand, 38749565 - 38749630
Alignment:
Q  145 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 210  Q
    ||||||||||||||||||||| | |||||||| ||  | ||||||||||| |||||| | ||||||    
T  38749565 acaccaacacatataattacattgaattatgtcattttttcaaattattatcggtgtcgacatgtc 38749630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 2577190 - 2577238
Alignment:
Q  153 acatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||| ||||||||||||||||| ||  ||||||||||||| ||||||    
T  2577190 acatatgattacactaaattatgtcattttctcaaattattatcggtgt 2577238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 213
Target Start/End: Original strand, 15410450 - 15410518
Alignment:
Q  145 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||||||||||||| |||||||| ||| || | ||  ||| |||||||||||||||| ||| |||||||    
T  15410450 acaccaacacatatgattacactgaatcatataattttcttaaattattagcggtgtcggcgtgtcagt 15410518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 28262408 - 28262468
Alignment:
Q  155 atataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 215  Q
    |||||||||| ||||||||||||||  ||||||||||| | || | ||||| |||||||||    
T  28262408 atataattaccctaaattatgtgattttctcaaattatcaacgttattggcgtgtcagtat 28262468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 6e-18; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 21880247 - 21880157
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcg 197  Q
    ||||||||||| ||||||| |||||| |||| ||||||||||| |||| | |||||||||| |||||||| ||  ||||||||||||||||    
T  21880247 attaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagcg 21880157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 201
Target Start/End: Complemental strand, 20549854 - 20549792
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||||||| ||||||||||||||||| ||||| |||||  ||||||||||||||||||||    
T  20549854 tgtccgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgt 20549792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 27093377 - 27093471
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||| |||| || |||| ||||| ||||| ||||  ||||| || ||||||||||||||||||||||||||  ||| ||||||||||||||||    
T  27093377 attaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgt 27093471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 27184924 - 27184830
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||| |||| || |||| ||||| ||||| ||||  ||||| || ||||||||||||||||||||||||||  ||| ||||||||||||||||    
T  27184924 attaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgt 27184830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 32287427 - 32287521
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||| |||| | ||||| |||||  |||||||||||||||| ||||||||| || |||| |||||||||||  ||||| ||||||||||||||    
T  32287427 attaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacacatatacttgcactgaattatgtgattttctcagattattagcggtgt 32287521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 3721156 - 3721099
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagc 196  Q
    ||||||||||| ||||||||||||| |||||||||||||||  |||||||||||||||    
T  3721156 tgtccgacaccgacacatataattatactaaattatgtgattttctcaaattattagc 3721099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 213
Target Start/End: Complemental strand, 15902879 - 15902811
Alignment:
Q  145 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||| |||||||||||||||||||||||||||||  | |||||||||||  ||||| |||||||||||    
T  15902879 acaccgacacatataattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagt 15902811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 106 - 201
Target Start/End: Original strand, 42720853 - 42720948
Alignment:
Q  106 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||| ||||||| ||||||| ||| ||||  |||| |||||  ||||||||||||||| | |||||||||||  | ||||||||||||||||||    
T  42720853 aattagacgtgttccggtgttgtacacatgttgtgtcagacactgacacatataattacatttaattatgtgattttttcaaattattagcggtgt 42720948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 8160471 - 8160417
Alignment:
Q  147 accaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||||||||||||||||||||||||||| ||  ||| ||||||||||||||||    
T  8160471 accaacacatataattacactaaattatgtaattttcttaaattattagcggtgt 8160417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 22484100 - 22484014
Alignment:
Q  127 ggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||||| ||||||||| |||||| ||||||||||||| ||| |||||||  ||  ||| |||||||||||||||| ||| |||||||    
T  22484100 ggacatgtgtcatgtctgacaccgacacatataattatactgaattatgcaattttctaaaattattagcggtgtcggcgtgtcagt 22484014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 26733399 - 26733305
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||||||||||  || | ||||||  ||| ||||||||||| |||||| |||||| ||| |||||||||||  | ||||||||||||||||||    
T  26733399 attaggcgtgttcccgtatcggacatgcgtcgtgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgt 26733305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 213
Target Start/End: Complemental strand, 32308171 - 32308109
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||| ||||||||| |||||||||||  |||||||||||||||||||| ||| |||||||    
T  32308171 acacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 32308109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 211
Target Start/End: Complemental strand, 1433554 - 1433445
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacacca-----acacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||| ||||| ||||||| ||||| ||||| |||||||||| |     |||||||||||||||| |||| |||||||  ||||||||||||| ||||||    
T  1433554 attagacgtgtcctggtgtcggacacatgtcttgtccgacacgacaccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgt 1433455  T
Q  202 tggcatgtca 211  Q
     ||| |||||    
T  1433454 cggcgtgtca 1433445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 2948739 - 2948670
Alignment:
Q  146 caccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 215  Q
    |||| ||||||||||||||||||||||| |||||  ||| ||||||| |||||||| ||| |||||||||    
T  2948739 caccgacacatataattacactaaattacgtgattttctaaaattatcagcggtgtcggcgtgtcagtat 2948670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 194
Target Start/End: Complemental strand, 5233686 - 5233637
Alignment:
Q  145 acaccaacacatataattacactaaattatgtgatgatctcaaattatta 194  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||||||    
T  5233686 acaccaacacatataattacactagattatgtgattttctcaaattatta 5233637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 5835321 - 5835248
Alignment:
Q  128 gacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||| |||||||||| |||||| ||||||||||||||||| |||||||| ||  ||||||| |||||| |||||    
T  5835321 gacacatgtcatgtctgacaccgacacatataattacactgaattatgttattttctcaaactattagtggtgt 5835248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 7328691 - 7328744
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagc 196  Q
    ||||||| |||||||||||||||||||||||||| ||  |||||||||||||||    
T  7328691 cgacaccgacacatataattacactaaattatgttattttctcaaattattagc 7328744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 211
Target Start/End: Complemental strand, 25482006 - 25481893
Alignment:
Q  98 actctttaaattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcg 197  Q
    ||||||| ||||| |||||||    ||| ||||| || || |||||||||||||||| | |||||||||| |||||||||||  | |||||||||||||     
T  25482006 actctttgaattaagcgtgtttcaatgtcggacacatatcgtgtccgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagct 25481907  T
Q  198 gtgttggcatgtca 211  Q
    |||| ||| |||||    
T  25481906 gtgtcggcgtgtca 25481893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 18213029 - 18213069
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgat 179  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  18213029 tgtccgacaccgacacatataattacactaaattatgtgat 18213069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 38143286 - 38143231
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 194  Q
    |||| |||||||||||||||||||||| |||||||||||||  | |||||||||||    
T  38143286 tgtctgacaccaacacatataattacattaaattatgtgattttttcaaattatta 38143231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 15680890 - 15680832
Alignment:
Q  121 ggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 179  Q
    ||||| |||||  |||| ||||||||||| |||| ||||||||||||||||||||||||    
T  15680890 ggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactaaattatgtgat 15680832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 22602710 - 22602780
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||| ||||||||||||||||| |||||||||||  |||||||| |||  |||||| ||| |||||||    
T  22602710 cgacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagt 22602780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 213
Target Start/End: Complemental strand, 22868093 - 22868031
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||||||||||||| |||||||||||  ||||| |||||||| ||||| ||| |||||||    
T  22868093 acacatataattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagt 22868031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 9482996 - 9482939
Alignment:
Q  140 gtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcg 197  Q
    |||||||||| ||||||||||||||||| |||| ||||||  ||||||||||| ||||    
T  9482996 gtccgacaccgacacatataattacactgaattgtgtgattttctcaaattatcagcg 9482939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 19206108 - 19206051
Alignment:
Q  144 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||| ||||||||||||| | | |||||||||||  ||||||||||||||||||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgt 19206051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 29787373 - 29787427
Alignment:
Q  145 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||||||||||  |||||||| |||||||||||  ||||||||||||||||||||    
T  29787373 acaccaacacata--attacactgaattatgtgattttctcaaattattagcggtgt 29787427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 5548727 - 5548671
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcat 207  Q
    ||||||||||||||||| |||||| ||||  ||||||||||| |||||||| |||||    
T  5548727 acacatataattacactgaattatttgattttctcaaattatcagcggtgtcggcat 5548671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 17307952 - 17307904
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaatta 191  Q
    ||||||||||||||||||||||||| |||||||| ||  ||||||||||    
T  17307952 cgacaccaacacatataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 17851482 - 17851434
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggt 199  Q
    ||||||||||||||||| |||||||||||  ||| ||||||||||||||    
T  17851482 acacatataattacactgaattatgtgattttctaaaattattagcggt 17851434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 33384584 - 33384640
Alignment:
Q  145 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||||||||||||||||||||||||||  |||  ||||| ||||||| ||||||    
T  33384584 acaccaacacatataattacactaaattataggattttctcagattattaacggtgt 33384640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 16341555 - 16341504
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 194  Q
    |||||||  |||||||||||||||| |||||||||||  |||||||||||||    
T  16341555 cgacaccggcacatataattacacttaattatgtgattttctcaaattatta 16341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 35297672 - 35297723
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 194  Q
    ||||||||||||||||||||| | | |||||||||||  |||||||||||||    
T  35297672 cgacaccaacacatataattataatgaattatgtgattttctcaaattatta 35297723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 598303 - 598209
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||||||| | ||||| |||||  |||| |||| |||||| |||| || ||||||| | ||||| |||||  ||| ||||||||||||||||    
T  598303 attaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattacatttaattacgtgattttcttaaattattagcggtgt 598209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 213
Target Start/End: Original strand, 6630920 - 6630982
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||||||||||||| ||||| ||||   |||||||||||||| ||||| ||| |||||||    
T  6630920 acacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagt 6630982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 8090021 - 8090083
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||||||||||||||| | ||||||| ||||| |||||  |||||||||| ||| |||||    
T  8090021 tgtccgacaccaacacatacagttacactgaattacgtgatattctcaaattactagtggtgt 8090083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 19992060 - 19992002
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||| |||| |||||||||||| || ||||||||  ||||||||||||||| ||||    
T  19992060 cgacaccgacacttataattacactgaaatatgtgattttctcaaattattagctgtgt 19992002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 27945100 - 27945030
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||| |||| | |||||||||| |||||||| ||  |||||||||||||| ||||| ||| |||||||    
T  27945100 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagt 27945030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 201
Target Start/End: Complemental strand, 28155633 - 28155571
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||||||| |||| | |||||||||  |||||||| ||  ||||||||||||||||||||    
T  28155633 tgtccgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcggtgt 28155571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 49107879 - 49107822
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||| ||||||||||| ||||| ||||||||| |  ||||||||||||||||||||    
T  49107879 cgacaccgacacatataatcacactcaattatgtg-ttttctcaaattattagcggtgt 49107822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 215
Target Start/End: Original strand, 2425736 - 2425805
Alignment:
Q  146 caccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 215  Q
    |||| ||||||||| || |||| |||||||||||  ||||||||||||| |||||  ||| |||||||||    
T  2425736 caccgacacatatagttccacttaattatgtgattttctcaaattattaacggtgccggcgtgtcagtat 2425805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 37870956 - 37870891
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 204  Q
    ||||||||||| ||||| |||||||||| |||| |||||||  |||||||| |||||  |||||||    
T  37870956 tgtccgacaccgacacacataattacacgaaatcatgtgattttctcaaatgattagtagtgttgg 37870891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 39138524 - 39138467
Alignment:
Q  122 gtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 179  Q
    ||||| ||||| | || ||||||||||| ||| ||||||||||||| |||||||||||    
T  39138524 gtgttagacatgtatcgtgtccgacaccgacatatataattacactgaattatgtgat 39138467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 1401094 - 1401030
Alignment:
Q  133 atgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcg 197  Q
    ||||| |||| |||||| | || |||||||||||| ||||||||||   ||||||||||||||||    
T  1401094 atgtcgtgtcggacaccgatacttataattacactgaattatgtgagtttctcaaattattagcg 1401030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 2424659 - 2424619
Alignment:
Q  157 ataattacactaaattatgtgatgatctcaaattattagcg 197  Q
    ||||||||||| |||||||||||  ||||||||||||||||    
T  2424659 ataattacactgaattatgtgattttctcaaattattagcg 2424619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 8046030 - 8046099
Alignment:
Q  142 ccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 215  Q
    |||| ||||||||| ||||||||||| ||||    |||  |||||||||||||| ||||||||| |||||||||    
T  8046030 ccgataccaacacagataattacactgaatt----gattttctcaaattattagtggtgttggcgtgtcagtat 8046099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 23191945 - 23191897
Alignment:
Q  153 acatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||| |||||||||| || ||||||||  ||||||||||||||||||||    
T  23191945 acatgtaattacactgaaatatgtgattttctcaaattattagcggtgt 23191897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 24339701 - 24339633
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 211  Q
    ||||||| |||| | |||||||||| |||||||||||  | ||||||||||||| |||| ||| |||||    
T  24339701 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtca 24339633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 194
Target Start/End: Original strand, 27732207 - 27732290
Alignment:
Q  106 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 194  Q
    ||||||| |||| ||||||| ||||||||||| |||     ||| ||||||||||||||||| |||||||| ||  ||| |||||||||    
T  27732207 aattaggtgtgtcctggtgtcggacatatgtcgtgt-----accgacacatataattacactgaattatgtaattttcttaaattatta 27732290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 41020591 - 41020519
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 179  Q
    ||||| ||||| | |||||| || || |||| ||| | ||||| || ||||||||||||||||||||||||||    
T  41020591 attagacgtgtcccggtgttagatatgtgtcgtgttcaacaccgacgcatataattacactaaattatgtgat 41020519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 31018653 - 31018579
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||||||| |||| |||||||||||||||| |||||||  ||| |||||||||||||||||||| |||||||    
T  31018653 tgtccgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgttggcgtgtcagt 31018579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 37411252 - 37411313
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcag 212  Q
    ||||||||||| ||||| |||||||||||  |||||||||||||||||||| ||||||||||    
T  37411252 acacatataatcacactgaattatgtgattttctcaaattattagcggtgtcggcatgtcag 37411313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 195
Target Start/End: Complemental strand, 5367287 - 5367199
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 195  Q
    ||||||||||| | || || ||| || |||| ||||||||||| ||||||||||||||||| |||||||||||   |||||||||||||    
T  5367287 attaggcgtgtcccggagtcggatatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttcctcaaattattag 5367199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 210
Target Start/End: Complemental strand, 21616813 - 21616754
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 210  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||||||| ||| ||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtc 21616754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 2438683 - 2438777
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||||||| | ||||| |||||| |||| ||||||||||| |||| | |||||||||| |||||||||||  | | ||||||||||| ||||    
T  2438683 attaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttgaaattattagctgtgt 2438777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 30404814 - 30404920
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 206  Q
    ||||||| ||| ||||||| |||||| |||| |||||||| || |||| | |||||||||| |||||||||||  | ||||||||||| | |||| |||     
T  30404814 attaggcatgtcctggtgtcggacatgtgtcgtgtccgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcg 30404913  T
Q  207 tgtcagt 213  Q
    |||||||    
T  30404914 tgtcagt 30404920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 44860379 - 44860321
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||| ||||||||||||||||| ||||||| |||  ||||||||||||||||||||    
T  44860379 cgacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgt 44860321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 18276579 - 18276510
Alignment:
Q  144 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||||| ||||| ||||||||||| ||||| |||||  |||||||||||||||||||| ||||| |||||    
T  18276579 gacaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagt 18276510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 23718087 - 23718027
Alignment:
Q  141 tccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||| |||| ||||||||||||||||| ||||||||||   ||||||||||||||||||||    
T  23718087 tccgtcaccgacacatataattacactgaattatgtgactttctcaaattattagcggtgt 23718027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 24105759 - 24105699
Alignment:
Q  141 tccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||| |||| ||||||||||||||||| ||||||||||   ||||||||||||||||||||    
T  24105759 tccgtcaccgacacatataattacactgaattatgtgactttctcaaattattagcggtgt 24105699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 34691801 - 34691861
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggt 199  Q
    ||||||||||| ||||||||||||||||| |||||| ||||  | ||||||||||||||||    
T  34691801 tgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34691861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 34714213 - 34714273
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggt 199  Q
    ||||||||||| ||||||||||||||||| |||||| ||||  | ||||||||||||||||    
T  34714213 tgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34714273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 36281734 - 36281678
Alignment:
Q  153 acatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgt 209  Q
    |||||| ||||||||||||||||||||  ||||||||||||| |||| |||||||||    
T  36281734 acatatgattacactaaattatgtgattttctcaaattattaacggtattggcatgt 36281678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 39279732 - 39279665
Alignment:
Q  145 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcag 212  Q
    ||||| ||||||||||||||||| |||||| ||||  ||||| ||||||| |||||||||| ||||||    
T  39279732 acaccgacacatataattacactgaattatttgattttctcatattattaacggtgttggcgtgtcag 39279665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 2665897 - 2665947
Alignment:
Q  152 cacatataattacactaaattatgtgatgatctcaaattattagcggtgtt 202  Q
    ||||||||||||||||||||||||||||  ||| |||||||||| ||||||    
T  2665897 cacatataattacactaaattatgtgattttctaaaattattagtggtgtt 2665947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 18420436 - 18420506
Alignment:
Q  145 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 215  Q
    ||||| |||| ||||||| || | |||||||||||  ||||||||||||||| |||||||| |||||||||    
T  18420436 acaccgacacttataattgcattgaattatgtgattttctcaaattattagcagtgttggcgtgtcagtat 18420506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 213
Target Start/End: Complemental strand, 35449564 - 35449502
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||||||||||||| |||| ||||||  ||||||||||||| | |||||||| |||||||    
T  35449564 acacatataattacactgaattctgtgattttctcaaattattaacagtgttggcttgtcagt 35449502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 36409641 - 36409699
Alignment:
Q  157 ataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 215  Q
    |||||||||||||||||||||||  | ||||||||| |||||||| ||||||| |||||    
T  36409641 ataattacactaaattatgtgattttttcaaattatcagcggtgtcggcatgtgagtat 36409699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 38117123 - 38117229
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 206  Q
    ||||||||||| | ||||| |||||  |||  |||||||||||||||| | |||||||||  || ||||||||  | ||||||||||||| |||| |||     
T  38117123 attaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacacttgtaattacaccgaagtatgtgattttttcaaattattagctgtgtcggcg 38117222  T
Q  207 tgtcagt 213  Q
    |||||||    
T  38117223 tgtcagt 38117229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 18571076 - 18570971
Alignment:
Q  98 actctttaaattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcg 197  Q
    |||||| | ||||||||||| ||||||| ||| || | || ||| ||||||  |||||||| |||||| | |||||||| ||  ||||||||||||| ||    
T  18571076 actcttcagattaggcgtgtcctggtgtcggatatgtatcgtgttcgacactgacacatatgattacattgaattatgtcattttctcaaattattatcg 18570977  T
Q  198 gtgttg 203  Q
    ||||||    
T  18570976 gtgttg 18570971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 20242723 - 20242763
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgat 179  Q
    ||||||||||| ||||||||||||||||| |||||||||||    
T  20242723 tgtccgacaccgacacatataattacactgaattatgtgat 20242763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 20922924 - 20922964
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgat 179  Q
    ||||||||||  |||||||||||||||||||||||||||||    
T  20922924 tgtccgacacagacacatataattacactaaattatgtgat 20922964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 21148499 - 21148439
Alignment:
Q  155 atataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 215  Q
    ||||||||||  |||||||||||||  ||||||||||| | || |||||||||||||||||    
T  21148499 atataattaccataaattatgtgattttctcaaattatcaacgttgttggcatgtcagtat 21148439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 21782832 - 21782888
Alignment:
Q  157 ataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||||||| |||||||||||  ||||||||||||||| |||| ||| |||||||    
T  21782832 ataattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagt 21782888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 28677958 - 28677910
Alignment:
Q  153 acatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||||||||||| |||||||||||  | ||||||||||||||||||    
T  28677958 acatataattacactgaattatgtgattttttcaaattattagcggtgt 28677910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 34784982 - 34785018
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgat 179  Q
    ||||||| |||||||||||||||||||||||||||||    
T  34784982 cgacaccgacacatataattacactaaattatgtgat 34785018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 194
Target Start/End: Original strand, 40361745 - 40361805
Alignment:
Q  134 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 194  Q
    |||| |||| |||||||||| |||||||||||||||||||||| ||  | |||||||||||    
T  40361745 tgtcgtgtctgacaccaacagatataattacactaaattatgtaattttttcaaattatta 40361805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 194
Target Start/End: Original strand, 30527603 - 30527646
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattatta 194  Q
    |||||||||||||||||||||||| ||||  |||||||||||||    
T  30527603 acacatataattacactaaattatatgattttctcaaattatta 30527646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 18889592 - 18889646
Alignment:
Q  144 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcgg 198  Q
    |||||| |||||||| |||||||| |||||||||||  |||||| ||||||||||    
T  18889592 gacaccgacacatatgattacactgaattatgtgattttctcaatttattagcgg 18889646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 31808128 - 31808078
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||||||||||||| |||||||||||  | | ||||||||||||||||    
T  31808128 acacatataattacactgaattatgtgattttgttaaattattagcggtgt 31808078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 205
Target Start/End: Original strand, 34993935 - 34994038
Alignment:
Q  96 acactctttaaattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 195  Q
    |||||| || |||||||||||| |  |||| ||||| ||||| ||| ||||||  ||||||||||||||| | |||||||      | ||||||||||||    
T  34993935 acactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgttcgacactgacacatataattacattgaattatg------tttcaaattattag 34994028  T
Q  196 cggtgttggc 205  Q
    ||||||||||    
T  34994029 cggtgttggc 34994038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 37559072 - 37558966
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 206  Q
    |||| |||||| | ||||| |||||  ||||| |||||||||| |||| | |||||||| | |||||||||||  |  |||||||||||| |||| |||     
T  37559072 attaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcg 37558973  T
Q  207 tgtcagt 213  Q
    |||||||    
T  37558972 tgtcagt 37558966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 42832277 - 42832334
Alignment:
Q  144 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||| |||| |||||||||||| || ||||| ||  ||||||||||||||||||||    
T  42832277 gacaccgacacttataattacactgaaatatgtaattttctcaaattattagcggtgt 42832334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 179
Target Start/End: Complemental strand, 18622665 - 18622629
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgat 179  Q
    |||||||||||| |||||||||||| |||||||||||    
T  18622665 cgacaccaacacgtataattacactgaattatgtgat 18622629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 195
Target Start/End: Original strand, 18840977 - 18841065
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 195  Q
    |||||| |||| | ||||| |||||| |||| |||| |||||| |||| | |||||||||| |||||||| ||  | ||||||||||||    
T  18840977 attaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatgtaattttttcaaattattag 18841065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 23921316 - 23921256
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggt 199  Q
    ||||||||||||| |  |||||||||||| |||||||| ||  ||||||||||||| ||||    
T  23921316 tgtccgacaccaatatttataattacactgaattatgtaattttctcaaattattaacggt 23921256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 194
Target Start/End: Original strand, 29176472 - 29176544
Alignment:
Q  122 gtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 194  Q
    |||| |||||| || | ||||| |||||||||| |||||||||||| ||||||||||   | |||||||||||    
T  29176472 gtgtcggacatgtgccgtgtccaacaccaacacttataattacactgaattatgtgaccttttcaaattatta 29176544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 9e-17; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 32804548 - 32804608
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 211  Q
    |||||||||||||||||||||||||||||  ||||||||||||| |||||| |||||||||    
T  32804548 acacatataattacactaaattatgtgattttctcaaattattaacggtgtcggcatgtca 32804608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 107 - 179
Target Start/End: Original strand, 40993299 - 40993371
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 179  Q
    ||||||||||| | ||||| |||||| |||| ||||||||||| ||||||||||||||||| |||||||||||    
T  40993299 attaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgat 40993371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 49505150 - 49505210
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggt 199  Q
    ||||||||||  |||||||||||||||||||||||||||||  ||||||||||||||||||    
T  49505150 tgtccgacactgacacatataattacactaaattatgtgattttctcaaattattagcggt 49505210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 201
Target Start/End: Complemental strand, 7928513 - 7928451
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||||||| ||||||||||||||||| |||||||||||  | ||||||||||||||||||    
T  7928513 tgtccgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgt 7928451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 11313800 - 11313858
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  11313800 cgacactaacacatataattacactaaattatgtgattttctcaaattattagcagtgt 11313858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 8039835 - 8039903
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 211  Q
    ||||||| ||||||||||||||||| |||||| | ||  |||||||||||||||||||||||| |||||    
T  8039835 cgacaccgacacatataattacactgaattatataattttctcaaattattagcggtgttggcgtgtca 8039903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 8383320 - 8383248
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 211  Q
    ||||||||||| |||| |||||||||||| |||||| ||||  |||||||||||||||||||| ||| |||||    
T  8383320 tgtccgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtca 8383248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 25948887 - 25948957
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||||||||||| |||||||||||| |||||||||||  | ||||||||||||| || | |||||||||||    
T  25948887 cgacaccaacacttataattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagt 25948957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 178
Target Start/End: Complemental strand, 3631777 - 3631708
Alignment:
Q  109 taggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtga 178  Q
    ||||||||| ||||||| |||||| |||| ||||||||||   |||||||||||||||| ||||||||||    
T  3631777 taggcgtgtcctggtgtcggacatgtgtcgtgtccgacactggcacatataattacactgaattatgtga 3631708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 4201459 - 4201394
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 204  Q
    |||| |||||||||| ||||||||||||| |||||||||||  | ||||||||||| |||||||||    
T  4201459 tgtcggacaccaacatatataattacacttaattatgtgattttttcaaattattaacggtgttgg 4201394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 202
Target Start/End: Complemental strand, 45451634 - 45451553
Alignment:
Q  121 ggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgtt 202  Q
    ||||| |||||| |||| ||||||||||| |||||||| |||| ||| || ||||||||  ||||||||||||||| |||||    
T  45451634 ggtgtcggacatgtgtcgtgtccgacaccgacacatattattatactgaagtatgtgattttctcaaattattagcagtgtt 45451553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 10455849 - 10455781
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 211  Q
    ||||||||||||||||||||||||| | |||| ||||  ||||| ||||||||| |||||||| |||||    
T  10455849 cgacaccaacacatataattacacttagttatatgattttctcatattattagcagtgttggcgtgtca 10455781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 15314876 - 15314912
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgat 179  Q
    |||||||||||||||||||||||||||||||||||||    
T  15314876 cgacaccaacacatataattacactaaattatgtgat 15314912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 195
Target Start/End: Complemental strand, 55401170 - 55401082
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 195  Q
    |||||||||||   ||||| |||||  |||| ||||||||||| |||| | ||||||||||||||||||||||  | ||||||||||||    
T  55401170 attaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 55401082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 8789541 - 8789608
Alignment:
Q  134 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||| ||||||||||| ||||||||||||||||  |||||||||||  ||||||||||| ||| ||||    
T  8789541 tgtcgtgtccgacaccgacacatataattacacggaattatgtgattttctcaaattataagccgtgt 8789608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 8842402 - 8842321
Alignment:
Q  129 acatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 211  Q
    |||| |||| |||| |||||| ||| |||||||||||| ||||||||||||  ||  |||||||||||||||| |||||||||    
T  8842402 acatgtgtcgtgtctgacaccgacatatataattacaccaaattatgtgattttc-aaaattattagcggtgtcggcatgtca 8842321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 11666003 - 11665949
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcg 197  Q
    ||||||| |||||||||||||||||||||| ||||||  | ||||||||||||||    
T  11666003 cgacaccgacacatataattacactaaattgtgtgattttatcaaattattagcg 11665949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 16192750 - 16192808
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||| ||||||||||||||||||| |||||||| ||  ||||||||||||| ||||||    
T  16192750 cgacatcaacacatataattacactgaattatgttattttctcaaattattaacggtgt 16192808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 35223006 - 35222961
Alignment:
Q  134 tgtcatgtccgacaccaacacatataattacactaaattatgtgat 179  Q
    |||||||||||||||| ||||||||||||||| | |||||||||||    
T  35223006 tgtcatgtccgacaccgacacatataattacattgaattatgtgat 35222961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 194
Target Start/End: Complemental strand, 25093582 - 25093510
Alignment:
Q  122 gtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 194  Q
    |||| |||||| |||  ||||||||||| ||||||||||||||||| |||| ||||||  |||||||| ||||    
T  25093582 gtgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattgtgtgattttctcaaatcatta 25093510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 27277852 - 27277896
Alignment:
Q  157 ataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||    
T  27277852 ataattacactaaattatgtgattttctcaaattattagcagtgt 27277896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 4987294 - 4987361
Alignment:
Q  146 caccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||||| | |||||||||| |||||||||||  | ||||||||||||| |||| ||| |||||||    
T  4987294 caccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagt 4987361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 6780415 - 6780466
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaatt 190  Q
    ||||||||||||||||||||||||||||| || || |||||  |||||||||    
T  6780415 tgtccgacaccaacacatataattacactgaactacgtgattttctcaaatt 6780466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 1509598 - 1509540
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||| |||| | ||||||||||||||||||||||  | ||||||||||||| ||||    
T  1509598 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 1509540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 10690274 - 10690320
Alignment:
Q  155 atataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||||||||| |||||||||||  ||||| ||||||||||||||    
T  10690274 atataattacactgaattatgtgattttctcagattattagcggtgt 10690320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 10955047 - 10954941
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 206  Q
    ||||||||||| |  |||| |||||  |||| ||||||||||| |||| | | |||||||| |||||||||||  | ||||||||||||  |||| |||     
T  10955047 attaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgtcggcg 10954948  T
Q  207 tgtcagt 213  Q
    |||||||    
T  10954947 tgtcagt 10954941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 25064954 - 25064900
Alignment:
Q  157 ataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 211  Q
    |||||||||||||||||||||||  | |||||| ||||||||||| ||| |||||    
T  25064954 ataattacactaaattatgtgattttttcaaatcattagcggtgtcggcgtgtca 25064900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 28678362 - 28678292
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||| ||||||| ||||| |||||||||||||||  | | ||||||||||| | || |||||||||||    
T  28678362 cgacaccgacacatacaattatactaaattatgtgattttattaaattattagcagcgtcggcatgtcagt 28678292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 34307788 - 34307838
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||| |||||||||||| || ||||||||  ||||||||||||||||||||    
T  34307788 acacttataattacactgaaatatgtgattttctcaaattattagcggtgt 34307838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 11610561 - 11610508
Alignment:
Q  162 tacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 215  Q
    |||||| |||||||||||  | | |||||||||||||||||||| |||||||||    
T  11610561 tacactgaattatgtgatttttttaaattattagcggtgttggcgtgtcagtat 11610508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 12704056 - 12703999
Alignment:
Q  153 acatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 210  Q
    ||||||||||||||| ||||||||| |  |||||||||||||| ||||| ||| ||||    
T  12704056 acatataattacactgaattatgtgcttttctcaaattattagtggtgtcggcgtgtc 12703999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 213
Target Start/End: Complemental strand, 21720822 - 21720753
Alignment:
Q  145 acaccaacacatataa-ttacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||||| ||||||||| ||||||| ||||||| |||  ||||||||||||| |||||| ||| |||||||    
T  21720822 acaccaccacatataaattacactgaattatgagatattctcaaattattatcggtgtcggcgtgtcagt 21720753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 24633364 - 24633437
Alignment:
Q  106 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 179  Q
    |||||||||||| | |||||| ||||  |||| ||||| ||||| ||||||||||||||| | ||||| |||||    
T  24633364 aattaggcgtgtaccggtgttagacaagtgtcgtgtccaacaccgacacatataattacattgaattacgtgat 24633437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 38731278 - 38731221
Alignment:
Q  142 ccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggt 199  Q
    |||||||| |||||||||| |||||| |||||||||||  | | ||||||||||||||    
T  38731278 ccgacaccgacacatataactacactgaattatgtgattttttaaaattattagcggt 38731221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 215
Target Start/End: Complemental strand, 7171596 - 7171489
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 206  Q
    |||||||||||   ||||| |||||  |||| |||||||||||||||| | |||||||||  |||||| ||||  | ||||||||  ||| |||| ||||    
T  7171596 attaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacaccaacacttgtaattacaccgaattatatgat-ttttcaaattacaagctgtgtcggca 7171498  T
Q  207 tgtcagtat 215  Q
    |||||||||    
T  7171497 tgtcagtat 7171489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 8587015 - 8587091
Alignment:
Q  137 catgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||||||||| |||| | |||||||||| |||||||||||  | |||||||| |||  |||| ||| |||||||    
T  8587015 catgtccgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagt 8587091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 13620772 - 13620836
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 215  Q
    |||||||||| | |||| ||| |||||||  |||||||||| ||||||||| | |||||||||||    
T  13620772 acacatataactgcactgaatcatgtgattttctcaaattactagcggtgtcgacatgtcagtat 13620836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 213
Target Start/End: Original strand, 24205004 - 24205111
Alignment:
Q  106 aattaggcgtgttctggtgttggacatatgtca-tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 204  Q
    |||||||||||| ||||||| |||||   |||| |||||||||| | ||| ||||||||||||  ||||||| ||  ||||||||||||| | |||| ||    
T  24205004 aattaggcgtgtcctggtgtcggacacgcgtcagtgtccgacacga-cacttataattacactgtattatgtcattttctcaaattattatccgtgtcgg 24205102  T
Q  205 catgtcagt 213  Q
    | |||||||    
T  24205103 cgtgtcagt 24205111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 25775602 - 25775497
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatga-tctcaaattattagcggtgttggc 205  Q
    ||||||||||| ||||||| |||||   | | ||||||||||| |||| | |||||||||| ||||||||||| | | |||||||||||   ||||||||    
T  25775602 attaggcgtgtcctggtgtcggacac--gacgtgtccgacaccgacacttgtaattacactgaattatgtgattattttcaaattattaaatgtgttggc 25775505  T
Q  206 atgtcagt 213  Q
     |||||||    
T  25775504 gtgtcagt 25775497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 3e-16; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 139 - 210
Target Start/End: Original strand, 13844592 - 13844663
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 210  Q
    ||||||||||| ||||||||||||||||| |||||||||||  ||||||||||||||| |||| ||| ||||    
T  13844592 tgtccgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtc 13844663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 107 - 194
Target Start/End: Original strand, 33405348 - 33405435
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 194  Q
    ||||| ||||| | |||||  ||||| |||| ||||||||||| ||||||||||||||||||||||||||| |  |||||||||||||    
T  33405348 attagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgacacatataattacactaaattatgtgtttttctcaaattatta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 201
Target Start/End: Complemental strand, 34897148 - 34897086
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||||| | ||||||||||||||||| |||||||||||  ||||||||||||||||||||    
T  34897148 tgtccgacatcgacacatataattacactgaattatgtgattttctcaaattattagcggtgt 34897086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 39954288 - 39954346
Alignment:
Q  152 cacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 210  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||||    
T  39954288 cacatataattacactaaattatgtgattttctcaaattattagcggtgtcggcgtgtc 39954346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 20785473 - 20785529
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcat 207  Q
    ||||||||||||||| |||||||||||||   |||||||||||||||||||||||||    
T  20785473 acacatataattacattaaattatgtgatttcctcaaattattagcggtgttggcat 20785529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 27101589 - 27101506
Alignment:
Q  127 ggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 211  Q
    |||||| |||||||||||||||  |||| ||||||| ||||||||||||||||  | |||||||||||||||||| ||| |||||    
T  27101589 ggacatgtgtcatgtccgacactgacacctataatt-cactaaattatgtgattttttcaaattattagcggtgtcggcgtgtca 27101506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 24362210 - 24362269
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 210  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||||||| ||| ||||    
T  24362210 acacatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtc 24362269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 14731763 - 14731713
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  14731763 acacatataattacactaaattatgtgattttctcaaattattagcagtgt 14731713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 195
Target Start/End: Complemental strand, 14134795 - 14134706
Alignment:
Q  106 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 195  Q
    |||||||||||| ||||||  |||||  |||| |||  |||||| ||| ||||||||||||| |||||||||||  ||||||||||||||    
T  14134795 aattaggcgtgtcctggtgacggacacgtgtcgtgtttgacaccgacatatataattacactgaattatgtgattttctcaaattattag 14134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 4786336 - 4786408
Alignment:
Q  141 tccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||||| ||||||||||||||||| |||||||||||  ||| |||||||||  ||||| ||| |||||||    
T  4786336 tccgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagt 4786408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 31236573 - 31236649
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 215  Q
    |||||| |||| ||||||||||||||| | |||||||||||  ||||||||||||||| |||| ||| |||| ||||    
T  31236573 tgtccgtcaccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtat 31236649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 196
Target Start/End: Complemental strand, 3025619 - 3025557
Alignment:
Q  134 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagc 196  Q
    |||| ||||||||||  |||| |||||||||||| |||||||||||  |||||||||||||||    
T  3025619 tgtcgtgtccgacactgacacctataattacactgaattatgtgattttctcaaattattagc 3025557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 15816129 - 15816199
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||| |||| ||||||||||||||||||||||||  | ||||||||||||  |||| ||| |||||||    
T  15816129 cgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagt 15816199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 31557091 - 31556986
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 206  Q
    ||||||||||| ||||||| |||||| |||| |||| |||||| | || | |||||||||| |||||||||||  | ||||||||||| | |||| |||     
T  31557091 attaggcgtgtcctggtgtcggacatgtgtcgtgtctgacaccgaaacttgtaattacactgaattatgtgat-ttttcaaattattaactgtgtcggcg 31556993  T
Q  207 tgtcagt 213  Q
    |||||||    
T  31556992 tgtcagt 31556986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 36450718 - 36450824
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 206  Q
    ||||||||||| ||||||| |||||   ||| ||||||||||| |||| | |||||||||| |||| ||||||  | ||||||||||||  |||| |||     
T  36450718 attaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaattctgtgattttttcaaattattagttgtgtcggcg 36450817  T
Q  207 tgtcagt 213  Q
    |||||||    
T  36450818 tgtcagt 36450824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 194
Target Start/End: Complemental strand, 11803316 - 11803267
Alignment:
Q  145 acaccaacacatataattacactaaattatgtgatgatctcaaattatta 194  Q
    ||||||||||||||||||||||| |||||||||||  ||| |||||||||    
T  11803316 acaccaacacatataattacactgaattatgtgattttcttaaattatta 11803267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 20679396 - 20679465
Alignment:
Q  144 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||||| |||| |||||||||||| || ||||||||  |||||||||||||| ||||| | |||||||||    
T  20679396 gacaccgacacttataattacactgaactatgtgattttctcaaattattaggggtgtcgacatgtcagt 20679465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 4611583 - 4611535
Alignment:
Q  153 acatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||||||||||| |||||||| ||  ||||||||||||||||||||    
T  4611583 acatataattacactgaattatgttattttctcaaattattagcggtgt 4611535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 5813688 - 5813584
Alignment:
Q  106 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggc 205  Q
    |||||||||||| | ||||| |||||  |||| ||||||||||| |||| | || |||||||||| |||||||   | ||||||||||||| |||| |||    
T  5813688 aattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagctgtgtcggc 5813589  T
Q  206 atgtc 210  Q
     ||||    
T  5813588 gtgtc 5813584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 7442902 - 7442838
Alignment:
Q  145 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgt 209  Q
    |||||||||| | |||||||||| |||||||| ||  | | ||||||||||||||||||||||||    
T  7442902 acaccaacacttgtaattacactgaattatgtaattttatgaaattattagcggtgttggcatgt 7442838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 18407815 - 18407711
Alignment:
Q  106 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggc 205  Q
    |||||||||||| || |||| |||||| |||| |||||| || | |||| | |||||||||| |||||||||||  | |  |||||||||| |||| |||    
T  18407815 aattaggcgtgtcctagtgtcggacatgtgtcgtgtccggcagcgacacttgtaattacactgaattatgtgatttttttgaattattagctgtgtcggc 18407716  T
Q  206 atgtc 210  Q
    |||||    
T  18407715 atgtc 18407711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 179
Target Start/End: Complemental strand, 29447503 - 29447467
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgat 179  Q
    ||||||||||||||||||||||||| |||||||||||    
T  29447503 cgacaccaacacatataattacacttaattatgtgat 29447467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 8343037 - 8342978
Alignment:
Q  137 catgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagc 196  Q
    ||||| ||||||| |||| | ||||||||||||||||||||||  | |||||||||||||    
T  8343037 catgtacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 8342978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 11927086 - 11927137
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 194  Q
    ||||||| ||||||||||||||||| |||||||||||  | |||||||||||    
T  11927086 cgacaccgacacatataattacactgaattatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 20873132 - 20873077
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 194  Q
    ||||||||||| |||| | ||||||||||||||||||||||  | |||||||||||    
T  20873132 tgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 20873077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 12606825 - 12606887
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||| |||||| ||||||||||||||| | |||||| ||||  ||||||||||||||| ||||    
T  12606825 tgtctgacaccgacacatataattacattgaattatatgattttctcaaattattagcagtgt 12606887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 34222998 - 34222944
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggc 205  Q
    ||||||||||||||||| |||||||||||  | | |||||||||||| |||||||    
T  34222998 acacatataattacacttaattatgtgattttattaaattattagcgatgttggc 34222944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 36934729 - 36934671
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    |||| |||||||||||||||||| | |||||||||||  | || |||||||||||||||    
T  36934729 cgacgccaacacatataattacaatgaattatgtgattttttcgaattattagcggtgt 36934671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 40332286 - 40332200
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatt 193  Q
    |||||||| || | ||||| |||||  |||| ||||| ||||| |||| | |||||||||| |||||||||||  ||||||||||||    
T  40332286 attaggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacacttgtaattacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 926785 - 926858
Alignment:
Q  140 gtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||||||||| |||| |||||||||||| ||  ||| |||  ||||||||||||||  |||||||| |||||||    
T  926785 gtccgacaccgacacttataattacactgaacaatgagattttctcaaattattaggagtgttggcgtgtcagt 926858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 176
Target Start/End: Complemental strand, 11833925 - 11833888
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgt 176  Q
    ||||||||||||||||||||||||||||| ||| ||||    
T  11833925 tgtccgacaccaacacatataattacactgaatcatgt 11833888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 22596056 - 22595983
Alignment:
Q  140 gtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||||||||||| | |||||||||| |||||||| ||  | | ||||||||||| |||| ||| |||||||    
T  22596056 gtccgacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagt 22595983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 30077385 - 30077454
Alignment:
Q  141 tccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 210  Q
    ||||||||  |||| | |||||||||| |||||||||||| | ||||||||||||| | |||||| ||||    
T  30077385 tccgacacggacacttgtaattacactgaattatgtgatgttttcaaattattagctgcgttggcgtgtc 30077454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 2572056 - 2572108
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 195  Q
    ||||||| |||| | ||||||||||||||||||||||  | ||||||||||||    
T  2572056 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 2572108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 4948715 - 4948659
Alignment:
Q  139 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 195  Q
    ||||||||||| |||| | |||||||||| |||||||||||  | ||||||||||||    
T  4948715 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 4948659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 7658520 - 7658464
Alignment:
Q  145 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||| ||| ||||||||||||| |||||||| ||  |||||||||||||| |||||    
T  7658520 acaccgacaaatataattacactgaattatgtaattttctcaaattattagtggtgt 7658464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 179
Target Start/End: Complemental strand, 8847315 - 8847279
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgat 179  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  8847315 cgacaccgacacatataattacactgaattatgtgat 8847279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 12570736 - 12570792
Alignment:
Q  145 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||||| ||||||||||||| ||||||| | |  ||| ||||||||||||||||    
T  12570736 acaccaacatatataattacacttaattatgcgtttttcttaaattattagcggtgt 12570792  T

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Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 24447076 - 24447016
Alignment:
Q  155 atataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 215  Q
    |||||||||| ||||||||||||||  ||||||||||| | || | ||||| |||||||||    
T  24447076 atataattaccctaaattatgtgattttctcaaattatcaacgttattggcgtgtcagtat 24447016  T

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Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 25172698 - 25172770
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 215  Q
    ||||||| ||||||||||||||| |||| ||||| ||  | ||||||||||||| ||||  |||| |||||||    
T  25172698 cgacaccgacacatataattacattaaaatatgtaattttatcaaattattagcagtgtcagcatatcagtat 25172770  T

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Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 26902175 - 26902211
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgat 179  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  26902175 cgacaccgacacatataattacactgaattatgtgat 26902211  T

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Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 27213598 - 27213534
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 215  Q
    ||||||||||||||| | |||||||||||  ||| ||||||||||| |||| ||| |||| ||||    
T  27213598 acacatataattacagtgaattatgtgattttctgaaattattagcagtgtcggcgtgtctgtat 27213534  T

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Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 31109512 - 31109588
Alignment:
Q  137 catgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||||||||  ||||||||| ||| ||| |||| | ||||  ||||||||||||| |||||| ||| |||||||    
T  31109512 catgtccgacactgacacatatagttagactgaattgtttgattttctcaaattattaacggtgtcggcgtgtcagt 31109588  T

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Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 37283824 - 37283880
Alignment:
Q  157 ataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||||||| |||||||||||  ||||| |||||||||||||   ||||||||||    
T  37283824 ataattacactgaattatgtgattttctcagattattagcggtgcccgcatgtcagt 37283880  T

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Target: scaffold0697 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 1733 - 1636
Alignment:
Q  113 cgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 210  Q
    ||||| || |||| |||||| |||| ||||||||||| |||| |||||||| || ||||||| ||||  ||||||||||||| |||||| ||| ||||    
T  1733 cgtgtcctagtgtcggacatgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgtgtc 1636  T

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Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 194
Target Start/End: Complemental strand, 70373 - 70286
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 194  Q
    ||||||| ||| ||||||| |||||  |||| ||||||||||| |||| |||||||||||| |||||||| ||  | |||||||||||    
T  70373 attaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgttattttttcaaattatta 70286  T

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Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 9747 - 9814
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 210  Q
    ||||||| ||||||||||||||||| ||||| |||||  |||||||||||||| || || ||||||||    
T  9747 cgacaccgacacatataattacactgaattaagtgattttctcaaattattagtggcgtcggcatgtc 9814  T

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Target: scaffold0123 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 44533 - 44583
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||||||||||||| |||||||||||  ||||||||| ||||||||||    
T  44533 acacatataattacactgaattatgtgattttctcaaatttttagcggtgt 44583  T

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Target: scaffold0053 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 8893 - 8787
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 206  Q
    |||||||||||   ||||| |||||  |||| ||||||||||| |||| | |||||||||||||| || ||||  | ||||||||||||| |||| |||     
T  8893 attaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcg 8794  T
Q  207 tgtcagt 213  Q
    |||||||    
T  8793 tgtcagt 8787  T

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Target: scaffold0022 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 90938 - 90832
Alignment:
Q  107 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 206  Q
    |||||||||||| |||||| |||||  |||  |||| |||| | ||| ||||||||||||| |||||| ||||  |||||||||||||  ||||||||      
T  90938 attaggcgtgttttggtgtcggacacgtgttgtgtctgacatcgacatatataattacactgaattatatgattttctcaaattattaatggtgttggtg 90839  T
Q  207 tgtcagt 213  Q
    |||||||    
T  90838 tgtcagt 90832  T

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Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 99952 - 99885
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 210  Q
    ||||||||||||||||||||||| | |||||||| ||  ||| ||||||||| |||||| | ||||||    
T  99952 cgacaccaacacatataattacattgaattatgttattttctaaaattattatcggtgtcgacatgtc 99885  T

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Target: scaffold0020 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 135312 - 135370
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 201  Q
    ||||||| ||||||||||||||||  |||||||||||  ||||||||||||||| ||||    
T  135312 cgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgt 135370  T

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Target: scaffold0008 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 213
Target Start/End: Original strand, 263380 - 263442
Alignment:
Q  151 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||| |||||||||||| ||||||||| |  ||||||||||||||| |||||| |||||||||    
T  263380 acacttataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagt 263442  T

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Target: scaffold0236 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 25768 - 25819
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 194  Q
    ||||||| |||| ||||||||||||||||||||||||  |||| ||||||||    
T  25768 cgacaccgacacttataattacactaaattatgtgattttctctaattatta 25819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 92851 - 92796
Alignment:
Q  158 taattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||||||||| |||||||| ||  |||||||||||||||||||| ||| |||||||    
T  92851 taattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagt 92796  T

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Target: scaffold0044 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 53236 - 53170
Alignment:
Q  146 caccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcag 212  Q
    |||| |||| |||||||||||| |||||||||||  |||||||||||| ||||| | ||| ||||||    
T  53236 caccgacacttataattacactgaattatgtgattttctcaaattattggcggtatcggcgtgtcag 53170  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 241653 - 241583
Alignment:
Q  143 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    ||||||| ||||  |||||||||||||||||||||||  |  |||||||||||| |||| ||| |||||||    
T  241653 cgacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagt 241583  T

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Target: scaffold0103 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 51864 - 51800
Alignment:
Q  149 caacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 213  Q
    |||||| | |||||||||| |||||||||||  | ||||||||||||| |||| ||| |||||||    
T  51864 caacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagt 51800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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