View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1517_high_21 (Length: 212)
Name: NF1517_high_21
Description: NF1517
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1517_high_21 |
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Alignment Details
Target: chr5 (Bit Score: 127; Significance: 9e-66; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 40118898 - 40119036
Alignment:
| Q |
13 |
aatataagcaagaacaaaatttcaatgctagcgttggagatgcttttattaattttggtcattcaatctcatgaatgacatcaatgataaagatacgtaa |
112 |
Q |
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| T |
40118898 |
aatataagcaagaacaaaatttcaatgcaagcgttggagatgcttttattaattttggtcattcgatctcatgaatgacatcaatgataaagatacgtaa |
40118997 |
T |
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| Q |
113 |
tataatgcctaaaaagtatgtaatatagattgatttcat |
151 |
Q |
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| T |
40118998 |
tataatgcctaaaaagtatgtaatataaattgatttcat |
40119036 |
T |
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