View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1517_high_9 (Length: 359)

Name: NF1517_high_9
Description: NF1517
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1517_high_9
NF1517_high_9
[»] chr6 (15 HSPs)
chr6 (93-318)||(18262306-18262531)
chr6 (320-359)||(1780043-1780082)
chr6 (318-359)||(231104-231145)
chr6 (321-358)||(25197152-25197189)
chr6 (311-359)||(34301831-34301879)
chr6 (320-359)||(29036125-29036164)
chr6 (321-355)||(1730104-1730138)
chr6 (317-359)||(2090654-2090696)
chr6 (321-359)||(4844400-4844438)
chr6 (321-359)||(8743188-8743226)
chr6 (321-359)||(9341838-9341876)
chr6 (321-359)||(30248647-30248685)
chr6 (321-354)||(1779784-1779817)
chr6 (327-359)||(20450180-20450212)
chr6 (319-355)||(25024509-25024545)
[»] chr8 (24 HSPs)
chr8 (321-359)||(40529307-40529345)
chr8 (320-357)||(44502619-44502656)
chr8 (320-359)||(51094-51133)
chr8 (320-359)||(1774341-1774380)
chr8 (320-359)||(2944271-2944310)
chr8 (320-359)||(28192174-28192213)
chr8 (321-359)||(8251932-8251970)
chr8 (321-359)||(8951427-8951465)
chr8 (321-359)||(13153928-13153966)
chr8 (321-359)||(14699452-14699490)
chr8 (321-359)||(18754144-18754182)
chr8 (321-359)||(28572046-28572084)
chr8 (321-359)||(28579639-28579677)
chr8 (321-359)||(33745894-33745932)
chr8 (321-359)||(34490517-34490555)
chr8 (321-359)||(34568490-34568528)
chr8 (320-358)||(39029177-39029215)
chr8 (321-354)||(28864247-28864280)
chr8 (321-358)||(29321294-29321331)
chr8 (321-358)||(32675757-32675794)
chr8 (320-357)||(41014503-41014540)
chr8 (315-359)||(8948350-8948394)
chr8 (320-352)||(12255095-12255127)
chr8 (320-352)||(12260638-12260670)
[»] chr7 (24 HSPs)
chr7 (321-359)||(29177251-29177289)
chr7 (317-359)||(29643142-29643184)
chr7 (318-358)||(19845669-19845709)
chr7 (320-359)||(26255095-26255134)
chr7 (320-359)||(39197717-39197756)
chr7 (321-355)||(1275736-1275770)
chr7 (321-359)||(19920563-19920601)
chr7 (321-359)||(21119557-21119595)
chr7 (321-359)||(21295151-21295189)
chr7 (321-359)||(29286036-29286074)
chr7 (321-359)||(32814433-32814471)
chr7 (321-359)||(32872374-32872412)
chr7 (321-359)||(33858865-33858903)
chr7 (321-359)||(36698130-36698168)
chr7 (321-359)||(38858298-38858336)
chr7 (321-359)||(41026095-41026133)
chr7 (321-359)||(41252360-41252398)
chr7 (321-359)||(48521029-48521067)
chr7 (326-359)||(17317446-17317479)
chr7 (321-358)||(19292839-19292876)
chr7 (321-358)||(39871613-39871650)
chr7 (320-357)||(40300229-40300266)
chr7 (319-359)||(41003153-41003193)
chr7 (319-359)||(43081250-43081290)
[»] chr5 (19 HSPs)
chr5 (321-359)||(41384171-41384209)
chr5 (320-359)||(1265948-1265987)
chr5 (321-359)||(6673227-6673265)
chr5 (319-357)||(7951560-7951598)
chr5 (321-359)||(9828393-9828431)
chr5 (321-359)||(13660861-13660899)
chr5 (321-359)||(14913648-14913686)
chr5 (321-359)||(16127259-16127297)
chr5 (321-359)||(22527692-22527730)
chr5 (321-359)||(22657768-22657806)
chr5 (321-359)||(26894872-26894910)
chr5 (321-359)||(28041350-28041388)
chr5 (321-359)||(40004408-40004446)
chr5 (321-359)||(40643094-40643132)
chr5 (321-359)||(41641095-41641133)
chr5 (321-358)||(16926452-16926489)
chr5 (321-354)||(41383912-41383945)
chr5 (327-359)||(31888899-31888931)
chr5 (321-357)||(34662204-34662240)
[»] chr4 (28 HSPs)
chr4 (321-359)||(6753525-6753563)
chr4 (321-359)||(17610019-17610057)
chr4 (317-359)||(19282080-19282122)
chr4 (321-359)||(24754078-24754116)
chr4 (321-359)||(48030313-48030351)
chr4 (321-359)||(53629792-53629830)
chr4 (317-358)||(5743659-5743700)
chr4 (318-359)||(34273218-34273259)
chr4 (312-359)||(9328239-9328286)
chr4 (320-359)||(30771527-30771566)
chr4 (320-359)||(47806859-47806898)
chr4 (320-359)||(50352063-50352102)
chr4 (320-359)||(52977981-52978020)
chr4 (320-359)||(55632258-55632297)
chr4 (321-359)||(4035825-4035863)
chr4 (321-359)||(5375556-5375594)
chr4 (321-359)||(10588075-10588113)
chr4 (321-359)||(28298370-28298408)
chr4 (321-359)||(32032992-32033030)
chr4 (321-359)||(39144404-39144442)
chr4 (321-359)||(44294789-44294827)
chr4 (321-359)||(45742805-45742843)
chr4 (321-359)||(50533884-50533922)
chr4 (321-358)||(33413518-33413555)
chr4 (318-359)||(47228727-47228768)
chr4 (326-359)||(54623806-54623839)
chr4 (321-357)||(26626003-26626039)
chr4 (321-357)||(36901111-36901147)
[»] chr3 (35 HSPs)
chr3 (321-359)||(7051719-7051757)
chr3 (321-359)||(32963104-32963142)
chr3 (321-359)||(33868448-33868486)
chr3 (320-359)||(10220932-10220971)
chr3 (320-359)||(16435235-16435274)
chr3 (320-359)||(21756485-21756524)
chr3 (320-359)||(26593764-26593803)
chr3 (320-359)||(33212396-33212435)
chr3 (321-359)||(9499496-9499534)
chr3 (321-355)||(10044842-10044876)
chr3 (321-359)||(12050391-12050429)
chr3 (320-358)||(14428609-14428647)
chr3 (321-359)||(21458982-21459020)
chr3 (321-359)||(22103928-22103966)
chr3 (321-359)||(25149121-25149159)
chr3 (321-359)||(28673293-28673331)
chr3 (321-355)||(32978481-32978515)
chr3 (321-359)||(35868082-35868120)
chr3 (321-359)||(37728713-37728751)
chr3 (321-359)||(43868103-43868141)
chr3 (321-359)||(44543782-44543820)
chr3 (321-359)||(45252773-45252811)
chr3 (320-358)||(46049986-46050024)
chr3 (321-359)||(50517521-50517559)
chr3 (321-359)||(51284061-51284099)
chr3 (321-359)||(52673187-52673225)
chr3 (321-359)||(53164163-53164201)
chr3 (320-357)||(4024051-4024088)
chr3 (321-358)||(7181350-7181387)
chr3 (321-358)||(9582243-9582280)
chr3 (321-354)||(17591285-17591318)
chr3 (321-358)||(27646306-27646343)
chr3 (327-359)||(17591544-17591576)
chr3 (319-359)||(20656309-20656349)
chr3 (315-359)||(26058540-26058584)
[»] chr2 (26 HSPs)
chr2 (321-359)||(15228148-15228186)
chr2 (321-359)||(16805790-16805828)
chr2 (321-359)||(16845071-16845109)
chr2 (321-359)||(22897391-22897429)
chr2 (318-359)||(7491841-7491882)
chr2 (317-358)||(27560202-27560243)
chr2 (319-359)||(16108474-16108514)
chr2 (320-359)||(1359790-1359829)
chr2 (320-359)||(2438224-2438263)
chr2 (320-359)||(8716891-8716930)
chr2 (320-359)||(10399461-10399500)
chr2 (321-359)||(8990204-8990242)
chr2 (321-359)||(11201683-11201721)
chr2 (321-359)||(11852184-11852222)
chr2 (321-359)||(13197644-13197682)
chr2 (321-359)||(17408293-17408331)
chr2 (321-359)||(20252210-20252248)
chr2 (321-355)||(32120944-32120978)
chr2 (321-359)||(34062664-34062702)
chr2 (321-359)||(34883847-34883885)
chr2 (321-359)||(36131027-36131065)
chr2 (321-359)||(41450516-41450554)
chr2 (326-359)||(30466110-30466143)
chr2 (321-358)||(40607702-40607739)
chr2 (326-359)||(41968201-41968234)
chr2 (321-357)||(6027618-6027654)
[»] chr1 (25 HSPs)
chr1 (319-359)||(45335883-45335923)
chr1 (320-359)||(943636-943675)
chr1 (320-359)||(15811231-15811270)
chr1 (320-359)||(39363193-39363232)
chr1 (320-359)||(44649628-44649667)
chr1 (320-359)||(49907020-49907059)
chr1 (321-359)||(1039380-1039418)
chr1 (321-359)||(1046286-1046324)
chr1 (321-359)||(4102713-4102751)
chr1 (321-359)||(11741397-11741435)
chr1 (321-355)||(15302747-15302781)
chr1 (321-359)||(23541979-23542017)
chr1 (321-355)||(28888427-28888461)
chr1 (320-358)||(30290264-30290302)
chr1 (321-359)||(36694854-36694892)
chr1 (321-359)||(36710955-36710993)
chr1 (321-359)||(37951948-37951986)
chr1 (321-359)||(39497433-39497471)
chr1 (321-359)||(45039412-45039450)
chr1 (321-359)||(46075866-46075904)
chr1 (321-359)||(50008482-50008520)
chr1 (321-359)||(50246928-50246966)
chr1 (321-359)||(52431173-52431211)
chr1 (321-358)||(22567066-22567103)
chr1 (322-359)||(30289861-30289898)
[»] scaffold0019 (1 HSPs)
scaffold0019 (320-359)||(117845-117884)
[»] scaffold0604 (1 HSPs)
scaffold0604 (321-359)||(3781-3819)
[»] scaffold0250 (1 HSPs)
scaffold0250 (321-359)||(9425-9463)
[»] scaffold0122 (1 HSPs)
scaffold0122 (321-359)||(12065-12103)
[»] scaffold0121 (1 HSPs)
scaffold0121 (321-359)||(24629-24667)
[»] scaffold0029 (1 HSPs)
scaffold0029 (321-359)||(51681-51719)
[»] scaffold0012 (2 HSPs)
scaffold0012 (321-359)||(47640-47678)
scaffold0012 (321-354)||(47904-47937)
[»] scaffold0008 (1 HSPs)
scaffold0008 (321-359)||(259121-259159)
[»] scaffold0339 (1 HSPs)
scaffold0339 (318-359)||(7139-7180)
[»] scaffold0039 (1 HSPs)
scaffold0039 (319-359)||(104060-104100)


Alignment Details
Target: chr6 (Bit Score: 218; Significance: 1e-120; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 93 - 318
Target Start/End: Complemental strand, 18262531 - 18262306
Alignment:
Q  93 tgagaatttcaattttgagattgtgaaattttcgattttcttgcacttttccgttaggggcgggaatttgaatttcaggagaaatttgaggaatgaggaa 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262531 tgagaatttcaattttgagattgtgaaattttcgattttcttgcacttttccgttaggggcgggaatttgaatttcaggagaaatttgaggaatgaggaa 18262432  T
Q  193 aatgtttcggaaccgggccaaaacgtgtaggaatgtgggtctggatccggtctgatcaaatatgggccttaaagcccgacctgaaatattgttagatggg 292  Q
    | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262431 agtgtttcggaaccgggccaaaacgtgtaggaatttgggtctggatccggtctgatcaaatatgggccttaaagcccgacctgaaatattgttagatggg 18262332  T
Q  293 tcatctatgtttttccaaaataacat 318  Q
    ||||||||||||||||||||||||||    
T  18262331 tcatctatgtttttccaaaataacat 18262306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 320 - 359
Target Start/End: Complemental strand, 1780082 - 1780043
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  1780082 ttactccctctatccctaattataagatccttttgagaat 1780043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 359
Target Start/End: Complemental strand, 231145 - 231104
Alignment:
Q  318 ttttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||||| ||||||||||||||| ||||||||||||    
T  231145 ttttactccctccgtccctaattataagacccttttgagaat 231104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 321 - 358
Target Start/End: Original strand, 25197152 - 25197189
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaa 358  Q
    |||||||||| |||||||||||||||||||||||||||    
T  25197152 tactccctccgtccctaattataagatccttttgagaa 25197189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 34301879 - 34301831
Alignment:
Q  311 aataacattttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||| || ||||||||||| ||||||||||||||| ||||||||||||    
T  34301879 aataaaatcttactccctccgtccctaattataagacccttttgagaat 34301831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Original strand, 29036125 - 29036164
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||| | ||||||||||||||||||||||||||    
T  29036125 ttactccctccgttcctaattataagatccttttgagaat 29036164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 355
Target Start/End: Complemental strand, 1730138 - 1730104
Alignment:
Q  321 tactccctccatccctaattataagatccttttga 355  Q
    |||||||||| ||||||||||||||||||||||||    
T  1730138 tactccctccgtccctaattataagatccttttga 1730104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 2090654 - 2090696
Alignment:
Q  317 attttactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||| ||||| ||||||||||||||| ||||||||||||    
T  2090654 attttactacctccgtccctaattataagacccttttgagaat 2090696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 4844400 - 4844438
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  4844400 tactccctccgtccctaattataagacccttttgagaat 4844438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 8743188 - 8743226
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  8743188 tactccctccgtccctaattataagacccttttgagaat 8743226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 9341838 - 9341876
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  9341838 tactacctccgtccctaattataagatccttttgagaat 9341876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 30248647 - 30248685
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  30248647 tactccctccgtccctaattataagacccttttgagaat 30248685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 354
Target Start/End: Original strand, 1779784 - 1779817
Alignment:
Q  321 tactccctccatccctaattataagatccttttg 354  Q
    |||||||||| |||||||||||||||||||||||    
T  1779784 tactccctccgtccctaattataagatccttttg 1779817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 359
Target Start/End: Complemental strand, 20450212 - 20450180
Alignment:
Q  327 ctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||||||| |||||||||||||||||    
T  20450212 ctccatccctaattaaaagatccttttgagaat 20450180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 355
Target Start/End: Complemental strand, 25024545 - 25024509
Alignment:
Q  319 tttactccctccatccctaattataagatccttttga 355  Q
    |||||||||||| |||||||||||||||| |||||||    
T  25024545 tttactccctccgtccctaattataagattcttttga 25024509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 40529307 - 40529345
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  40529307 tactccctccgtccctaattataagatccttttgagaat 40529345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 44502619 - 44502656
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgaga 357  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  44502619 ttactccctccgtccctaattataagatccttttgaga 44502656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Complemental strand, 51133 - 51094
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  51133 ttactccctccgtccctaattataagacccttttgagaat 51094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Original strand, 1774341 - 1774380
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  1774341 ttactccctccgtccctaattataagacccttttgagaat 1774380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Complemental strand, 2944310 - 2944271
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  2944310 ttactccctccgtccctaattataagacccttttgagaat 2944271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Complemental strand, 28192213 - 28192174
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  28192213 ttactccctccgtccctaattataagacccttttgagaat 28192174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 8251970 - 8251932
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  8251970 tactccctccgtccctaattataagacccttttgagaat 8251932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 8951465 - 8951427
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  8951465 tactccctccgtccctaattataagacccttttgagaat 8951427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 13153928 - 13153966
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  13153928 tactccctccgtccctaattataagacccttttgagaat 13153966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 14699452 - 14699490
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  14699452 tacttcctccgtccctaattataagatccttttgagaat 14699490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 18754144 - 18754182
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  18754144 tactccctccgtccctaattataagacccttttgagaat 18754182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 28572046 - 28572084
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  28572046 tactccctccgtccctaattataagacccttttgagaat 28572084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 28579639 - 28579677
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  28579639 tactccctccgtccctaattataagacccttttgagaat 28579677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 33745932 - 33745894
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  33745932 tactccctccgttcctaattataagatccttttgagaat 33745894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 34490517 - 34490555
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  34490517 tactccctccgtccctaattataagatctttttgagaat 34490555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 34568490 - 34568528
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  34568490 tactccctccgtccctaattataagacccttttgagaat 34568528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 358
Target Start/End: Original strand, 39029177 - 39029215
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaa 358  Q
    ||||||||||| ||||||||||||||| |||||||||||    
T  39029177 ttactccctccgtccctaattataagacccttttgagaa 39029215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 354
Target Start/End: Original strand, 28864247 - 28864280
Alignment:
Q  321 tactccctccatccctaattataagatccttttg 354  Q
    |||||||||||||||||||||||||| |||||||    
T  28864247 tactccctccatccctaattataagacccttttg 28864280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 358
Target Start/End: Complemental strand, 29321331 - 29321294
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaa 358  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  29321331 tactacctccatccctaattataagacccttttgagaa 29321294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 358
Target Start/End: Complemental strand, 32675794 - 32675757
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaa 358  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  32675794 tactccctccgtccctaattataagacccttttgagaa 32675757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 41014503 - 41014540
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgaga 357  Q
    ||||||||||| ||||||||||||||||| ||||||||    
T  41014503 ttactccctccgtccctaattataagatctttttgaga 41014540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 359
Target Start/End: Complemental strand, 8948394 - 8948350
Alignment:
Q  315 acattttactccctccatccctaattataagatccttttgagaat 359  Q
    |||| ||||||| ||| ||||||||||||||| ||||||||||||    
T  8948394 acatattactccatccgtccctaattataagacccttttgagaat 8948350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 352
Target Start/End: Original strand, 12255095 - 12255127
Alignment:
Q  320 ttactccctccatccctaattataagatccttt 352  Q
    ||||||||||| |||||||||||||||||||||    
T  12255095 ttactccctccgtccctaattataagatccttt 12255127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 352
Target Start/End: Original strand, 12260638 - 12260670
Alignment:
Q  320 ttactccctccatccctaattataagatccttt 352  Q
    ||||||||||| |||||||||||||||||||||    
T  12260638 ttactccctccgtccctaattataagatccttt 12260670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 29177289 - 29177251
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  29177289 tactccctccgtccctaattataagatccttttgagaat 29177251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 359
Target Start/End: Complemental strand, 29643184 - 29643142
Alignment:
Q  317 attttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||||||||| |||||||||||| ||||||||||||    
T  29643184 attttactccctccatctctaattataagacccttttgagaat 29643142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 358
Target Start/End: Complemental strand, 19845709 - 19845669
Alignment:
Q  318 ttttactccctccatccctaattataagatccttttgagaa 358  Q
    ||||||| ||||| |||||||||||||||||||||||||||    
T  19845709 ttttactacctccgtccctaattataagatccttttgagaa 19845669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Original strand, 26255095 - 26255134
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  26255095 ttactccctccgtccctaattataagacccttttgagaat 26255134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Original strand, 39197717 - 39197756
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  39197717 ttactccctccgtccctaattataagacccttttgagaat 39197756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 355
Target Start/End: Complemental strand, 1275770 - 1275736
Alignment:
Q  321 tactccctccatccctaattataagatccttttga 355  Q
    |||||||||||||||||||||||||| ||||||||    
T  1275770 tactccctccatccctaattataagacccttttga 1275736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 19920563 - 19920601
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  19920563 tactccctccgtccctaattataagacccttttgagaat 19920601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 21119557 - 21119595
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  21119557 tactacctccgtccctaattataagatccttttgagaat 21119595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 21295151 - 21295189
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  21295151 tactccctccgtccctaattataagacccttttgagaat 21295189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 29286074 - 29286036
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  29286074 tactccctccgtccctaattataagacccttttgagaat 29286036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 32814433 - 32814471
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  32814433 tactccctccgtccctaattataagacccttttgagaat 32814471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 32872412 - 32872374
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  32872412 tactccctccgtccctaattataagacccttttgagaat 32872374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 33858903 - 33858865
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  33858903 tactccctccgtccctaattataagacccttttgagaat 33858865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 36698168 - 36698130
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  36698168 tactccctccgtccctaattataagacccttttgagaat 36698130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 38858298 - 38858336
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  38858298 tactccctccgtccctaattataagacccttttgagaat 38858336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 41026133 - 41026095
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  41026133 tactccctccgtccctaattataagacccttttgagaat 41026095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 41252398 - 41252360
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  41252398 tactccctccgtccctaattataagacccttttgagaat 41252360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 48521029 - 48521067
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  48521029 tactccctccgtccctaattataagacccttttgagaat 48521067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 359
Target Start/End: Original strand, 17317446 - 17317479
Alignment:
Q  326 cctccatccctaattataagatccttttgagaat 359  Q
    ||||| ||||||||||||||||||||||||||||    
T  17317446 cctccgtccctaattataagatccttttgagaat 17317479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 358
Target Start/End: Original strand, 19292839 - 19292876
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaa 358  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  19292839 tactacctccgtccctaattataagatccttttgagaa 19292876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 358
Target Start/End: Complemental strand, 39871650 - 39871613
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaa 358  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  39871650 tactccctccgtccctaattataagacccttttgagaa 39871613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 40300229 - 40300266
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgaga 357  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  40300229 ttactccctccgtccctaattataagacccttttgaga 40300266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 359
Target Start/End: Complemental strand, 41003193 - 41003153
Alignment:
Q  319 tttactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||||| ||| ||||||||||| ||||||||||||    
T  41003193 tttactccctccgtccttaattataagacccttttgagaat 41003153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 359
Target Start/End: Original strand, 43081250 - 43081290
Alignment:
Q  319 tttactccctccatccctaattataagatccttttgagaat 359  Q
    |||||| ||| | ||||||||||||||||||||||||||||    
T  43081250 tttactaccttcgtccctaattataagatccttttgagaat 43081290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 41384209 - 41384171
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  41384209 tactccctccgtccctaattataagatccttttgagaat 41384171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Original strand, 1265948 - 1265987
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  1265948 ttactccctccgtccctaattataagacccttttgagaat 1265987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 6673265 - 6673227
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  6673265 tactccctccgtccctaattataagacccttttgagaat 6673227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 357
Target Start/End: Original strand, 7951560 - 7951598
Alignment:
Q  319 tttactccctccatccctaattataagatccttttgaga 357  Q
    |||||||||||| ||||||||||||||| ||||||||||    
T  7951560 tttactccctccgtccctaattataagacccttttgaga 7951598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 9828393 - 9828431
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  9828393 tactccctccgtccctaattataagacccttttgagaat 9828431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 13660861 - 13660899
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| || |||||||||||||||||||||||||    
T  13660861 tactccctccgtctctaattataagatccttttgagaat 13660899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 14913648 - 14913686
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  14913648 tactccctccgtccctaattataagacccttttgagaat 14913686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 16127259 - 16127297
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  16127259 tactccctccgtccctaattataagacccttttgagaat 16127297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 22527692 - 22527730
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  22527692 tactccctccgtccctaattataagacccttttgagaat 22527730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 22657768 - 22657806
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  22657768 tactacctccgtccctaattataagatccttttgagaat 22657806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 26894910 - 26894872
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  26894910 tactccctccgtccctaattataagacccttttgagaat 26894872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 28041388 - 28041350
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||||||||||||||||||| || |||||||||    
T  28041388 tactccctccatccctaattataagacccctttgagaat 28041350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 40004446 - 40004408
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  40004446 tactccctccgtccctaattataagacccttttgagaat 40004408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 40643094 - 40643132
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  40643094 tactacctccgtccctaattataagatccttttgagaat 40643132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 41641095 - 41641133
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  41641095 tactccctccgtccctaattataagatcattttgagaat 41641133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 358
Target Start/End: Original strand, 16926452 - 16926489
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaa 358  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  16926452 tactacctccatccctaattataagacccttttgagaa 16926489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 354
Target Start/End: Original strand, 41383912 - 41383945
Alignment:
Q  321 tactccctccatccctaattataagatccttttg 354  Q
    |||||||||| |||||||||||||||||||||||    
T  41383912 tactccctccgtccctaattataagatccttttg 41383945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 359
Target Start/End: Original strand, 31888899 - 31888931
Alignment:
Q  327 ctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||||||| |||||||||||||||||    
T  31888899 ctccatccctaattaaaagatccttttgagaat 31888931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 34662204 - 34662240
Alignment:
Q  321 tactccctccatccctaattataagatccttttgaga 357  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  34662204 tactccctccgtccctaattataagacccttttgaga 34662240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000001; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 6753525 - 6753563
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  6753525 tactccctccgtccctaattataagatccttttgagaat 6753563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 17610057 - 17610019
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  17610057 tactccctccgtccctaattataagatccttttgagaat 17610019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 359
Target Start/End: Complemental strand, 19282122 - 19282080
Alignment:
Q  317 attttactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||||| | ||||||||||||||||||||||||||||    
T  19282122 attttactccctacgtccctaattataagatccttttgagaat 19282080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 24754078 - 24754116
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  24754078 tactccctccgtccctaattataagatccttttgagaat 24754116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 48030313 - 48030351
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  48030313 tactccctccatccctaattataagacccttttgagaat 48030351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 53629792 - 53629830
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  53629792 tactccctccatccctaattataagacccttttgagaat 53629830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 317 - 358
Target Start/End: Complemental strand, 5743700 - 5743659
Alignment:
Q  317 attttactccctccatccctaattataagatccttttgagaa 358  Q
    |||||||||||||| ||||||||||||||| |||||||||||    
T  5743700 attttactccctccgtccctaattataagacccttttgagaa 5743659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 359
Target Start/End: Complemental strand, 34273259 - 34273218
Alignment:
Q  318 ttttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||||| ||||||||||||||| ||||||||||||    
T  34273259 ttttactccctccgtccctaattataagacccttttgagaat 34273218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 312 - 359
Target Start/End: Complemental strand, 9328286 - 9328239
Alignment:
Q  312 ataacattttactccctccatccctaattataagatccttttgagaat 359  Q
    |||| ||| |||||||||| ||||||||||||||| ||||||||||||    
T  9328286 ataaaattgtactccctccgtccctaattataagacccttttgagaat 9328239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Original strand, 30771527 - 30771566
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  30771527 ttactccctccgtccctaattataagacccttttgagaat 30771566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Original strand, 47806859 - 47806898
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  47806859 ttactccctccgtccctaattataagacccttttgagaat 47806898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Original strand, 50352063 - 50352102
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||| || |||||||||||||||||||||||||    
T  50352063 ttactccctccgtctctaattataagatccttttgagaat 50352102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Original strand, 52977981 - 52978020
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  52977981 ttactccctccgtccctaattataagacccttttgagaat 52978020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Complemental strand, 55632297 - 55632258
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||| || |||||||||||||||||||||||||    
T  55632297 ttactccctccgtctctaattataagatccttttgagaat 55632258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 4035825 - 4035863
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  4035825 tactccctccgtccctaattataagacccttttgagaat 4035863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 5375594 - 5375556
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  5375594 tactccctccgtccctaattataagacccttttgagaat 5375556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 10588075 - 10588113
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  10588075 tactccctccgtccctaattataacatccttttgagaat 10588113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 28298408 - 28298370
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  28298408 tactacctccgtccctaattataagatccttttgagaat 28298370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 32033030 - 32032992
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  32033030 tactccctccgtccctaattataagacccttttgagaat 32032992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 39144404 - 39144442
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| |||||||||||||||||||||| |||||    
T  39144404 tactccctccgtccctaattataagatccttttaagaat 39144442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 44294789 - 44294827
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  44294789 tactccctccgtccctaattataagacccttttgagaat 44294827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 45742843 - 45742805
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  45742843 tactccctccgtccctaattataagacccttttgagaat 45742805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 50533884 - 50533922
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  50533884 tactccctccgtccctaattataagatcattttgagaat 50533922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 358
Target Start/End: Original strand, 33413518 - 33413555
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaa 358  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  33413518 tactccctccgtccctaattataagacccttttgagaa 33413555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 359
Target Start/End: Complemental strand, 47228768 - 47228727
Alignment:
Q  318 ttttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||    
T  47228768 ttttacttcctccgtccctaattataagacccttttgagaat 47228727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 359
Target Start/End: Original strand, 54623806 - 54623839
Alignment:
Q  326 cctccatccctaattataagatccttttgagaat 359  Q
    ||||| ||||||||||||||||||||||||||||    
T  54623806 cctccgtccctaattataagatccttttgagaat 54623839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 357
Target Start/End: Complemental strand, 26626039 - 26626003
Alignment:
Q  321 tactccctccatccctaattataagatccttttgaga 357  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  26626039 tactccctccgtccctaattataagacccttttgaga 26626003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 357
Target Start/End: Complemental strand, 36901147 - 36901111
Alignment:
Q  321 tactccctccatccctaattataagatccttttgaga 357  Q
    |||| ||||| ||||||||||||||||||||||||||    
T  36901147 tactacctccgtccctaattataagatccttttgaga 36901111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 7051757 - 7051719
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  7051757 tactccctccgtccctaattataagatccttttgagaat 7051719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 32963142 - 32963104
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  32963142 tactccctccgtccctaattataagatccttttgagaat 32963104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 33868448 - 33868486
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  33868448 tactccctccgtccctaattataagatccttttgagaat 33868486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Original strand, 10220932 - 10220971
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  10220932 ttactccctccgtccctaattataagacccttttgagaat 10220971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Complemental strand, 16435274 - 16435235
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||| || |||||||||||||||||||||||||    
T  16435274 ttactccctccgtctctaattataagatccttttgagaat 16435235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Original strand, 21756485 - 21756524
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  21756485 ttactccctccgtccctaattataagacccttttgagaat 21756524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Complemental strand, 26593803 - 26593764
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  26593803 ttactccctccgtccctaattataagacccttttgagaat 26593764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Original strand, 33212396 - 33212435
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  33212396 ttactacctccgtccctaattataagatccttttgagaat 33212435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 9499534 - 9499496
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  9499534 tactccctccgtccctaattataagacccttttgagaat 9499496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 355
Target Start/End: Original strand, 10044842 - 10044876
Alignment:
Q  321 tactccctccatccctaattataagatccttttga 355  Q
    |||||||||| ||||||||||||||||||||||||    
T  10044842 tactccctccgtccctaattataagatccttttga 10044876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 12050429 - 12050391
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  12050429 tactccctccgtccctaattataagacccttttgagaat 12050391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 358
Target Start/End: Original strand, 14428609 - 14428647
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaa 358  Q
    ||||||||||| ||||||||||||||| |||||||||||    
T  14428609 ttactccctccgtccctaattataagacccttttgagaa 14428647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 21458982 - 21459020
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  21458982 tactacctccgtccctaattataagatccttttgagaat 21459020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 22103966 - 22103928
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  22103966 tactccctccgtccctaattataagacccttttgagaat 22103928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 25149159 - 25149121
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  25149159 tactccctccgtccctaattataagacccttttgagaat 25149121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 28673331 - 28673293
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  28673331 tactacctccgtccctaattataagatccttttgagaat 28673293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 355
Target Start/End: Original strand, 32978481 - 32978515
Alignment:
Q  321 tactccctccatccctaattataagatccttttga 355  Q
    |||||||||| ||||||||||||||||||||||||    
T  32978481 tactccctccgtccctaattataagatccttttga 32978515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 35868120 - 35868082
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  35868120 tactccctccgtccctaattataagacccttttgagaat 35868082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 37728713 - 37728751
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  37728713 tactccctccgtccctaattataagacccttttgagaat 37728751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 43868103 - 43868141
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  43868103 tactccctccgtccctaattataagacccttttgagaat 43868141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 44543782 - 44543820
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  44543782 tactccctccgtccctaattataagacccttttgagaat 44543820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 45252773 - 45252811
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  45252773 tactccctccgtccctaattataagacccttttgagaat 45252811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 358
Target Start/End: Complemental strand, 46050024 - 46049986
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaa 358  Q
    ||||||||||| ||||||||||||||| |||||||||||    
T  46050024 ttactccctccgtccctaattataagacccttttgagaa 46049986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 50517559 - 50517521
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  50517559 tactacctccgtccctaattataagatccttttgagaat 50517521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 51284099 - 51284061
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  51284099 tactccctccgtccctaattataagacccttttgagaat 51284061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 52673187 - 52673225
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  52673187 tactccctccatcactaattataagacccttttgagaat 52673225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 53164163 - 53164201
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  53164163 tactacctccgtccctaattataagatccttttgagaat 53164201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 4024051 - 4024088
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgaga 357  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  4024051 ttactccctccgtccctaattataagacccttttgaga 4024088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 358
Target Start/End: Original strand, 7181350 - 7181387
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaa 358  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  7181350 tactccctccgtccctaattataagacccttttgagaa 7181387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 358
Target Start/End: Original strand, 9582243 - 9582280
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaa 358  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  9582243 tactacctccatccctaattataagacccttttgagaa 9582280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 354
Target Start/End: Original strand, 17591285 - 17591318
Alignment:
Q  321 tactccctccatccctaattataagatccttttg 354  Q
    |||||||||||||||||||||||||| |||||||    
T  17591285 tactccctccatccctaattataagacccttttg 17591318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 358
Target Start/End: Complemental strand, 27646343 - 27646306
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaa 358  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  27646343 tactacctccgtccctaattataagatccttttgagaa 27646306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 359
Target Start/End: Complemental strand, 17591576 - 17591544
Alignment:
Q  327 ctccatccctaattataagatccttttgagaat 359  Q
    |||| ||||||||||||||||||||||||||||    
T  17591576 ctccctccctaattataagatccttttgagaat 17591544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 359
Target Start/End: Complemental strand, 20656349 - 20656309
Alignment:
Q  319 tttactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||||| | |||||||||||||| |||||||||||    
T  20656349 tttactccctccgttcctaattataagattcttttgagaat 20656309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 359
Target Start/End: Original strand, 26058540 - 26058584
Alignment:
Q  315 acattttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||| |||| ||||| ||||||||||||||| ||||||||||||    
T  26058540 acattctacttcctccgtccctaattataagacccttttgagaat 26058584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 15228186 - 15228148
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  15228186 tactccctccgtccctaattataagatccttttgagaat 15228148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 16805828 - 16805790
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  16805828 tactccctccgtccctaattataagatccttttgagaat 16805790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 16845109 - 16845071
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  16845109 tactccctccgtccctaattataagatccttttgagaat 16845071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 22897391 - 22897429
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  22897391 tactccctccgtccctaattataagatccttttgagaat 22897429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 359
Target Start/End: Original strand, 7491841 - 7491882
Alignment:
Q  318 ttttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||||| ||||||||||||||| ||||||||||||    
T  7491841 ttttactccctccgtccctaattataagacccttttgagaat 7491882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 317 - 358
Target Start/End: Original strand, 27560202 - 27560243
Alignment:
Q  317 attttactccctccatccctaattataagatccttttgagaa 358  Q
    |||||||||||||| ||||||||||||||| |||||||||||    
T  27560202 attttactccctccgtccctaattataagacccttttgagaa 27560243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 359
Target Start/End: Complemental strand, 16108514 - 16108474
Alignment:
Q  319 tttactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||||| |||||||||||||||| |||||||||||    
T  16108514 tttactccctccgtccctaattataagattcttttgagaat 16108474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Original strand, 1359790 - 1359829
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||| ||||||||||||||||||||| ||||||    
T  1359790 ttactccctccgtccctaattataagatcctttggagaat 1359829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Original strand, 2438224 - 2438263
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  2438224 ttactccctccgtccctaattataagacccttttgagaat 2438263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Complemental strand, 8716930 - 8716891
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  8716930 ttactccctccgtccctaattataagacccttttgagaat 8716891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Complemental strand, 10399500 - 10399461
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  10399500 ttactacctccatccctaattataagacccttttgagaat 10399461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 8990204 - 8990242
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  8990204 tactccctccgtccctaattataagatctttttgagaat 8990242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 11201683 - 11201721
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  11201683 tactccctccgtccctaattataagacccttttgagaat 11201721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 11852222 - 11852184
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  11852222 tactacctccgtccctaattataagatccttttgagaat 11852184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 13197682 - 13197644
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  13197682 tactccctccgtccctaattataagattcttttgagaat 13197644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 17408331 - 17408293
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  17408331 tactccctccgtccctaattataagacccttttgagaat 17408293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 20252210 - 20252248
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  20252210 tactccctccgtccctaattataagacccttttgagaat 20252248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 355
Target Start/End: Original strand, 32120944 - 32120978
Alignment:
Q  321 tactccctccatccctaattataagatccttttga 355  Q
    |||||||||| ||||||||||||||||||||||||    
T  32120944 tactccctccgtccctaattataagatccttttga 32120978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 34062702 - 34062664
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  34062702 tactccctccgtccctaattataagacccttttgagaat 34062664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 34883885 - 34883847
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  34883885 tactccctccgtccctaattataagacccttttgagaat 34883847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 36131065 - 36131027
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  36131065 tactccctccgtccctaattataagacccttttgagaat 36131027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 41450516 - 41450554
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  41450516 tactccctccgtccctaattataagacccttttgagaat 41450554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 359
Target Start/End: Original strand, 30466110 - 30466143
Alignment:
Q  326 cctccatccctaattataagatccttttgagaat 359  Q
    ||||| ||||||||||||||||||||||||||||    
T  30466110 cctccgtccctaattataagatccttttgagaat 30466143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 358
Target Start/End: Original strand, 40607702 - 40607739
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaa 358  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  40607702 tactccctccgtccctaattataagacccttttgagaa 40607739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 359
Target Start/End: Complemental strand, 41968234 - 41968201
Alignment:
Q  326 cctccatccctaattataagatccttttgagaat 359  Q
    ||||| ||||||||||||||||||||||||||||    
T  41968234 cctccgtccctaattataagatccttttgagaat 41968201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 6027618 - 6027654
Alignment:
Q  321 tactccctccatccctaattataagatccttttgaga 357  Q
    |||| ||||| ||||||||||||||||||||||||||    
T  6027618 tactacctccgtccctaattataagatccttttgaga 6027654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 359
Target Start/End: Original strand, 45335883 - 45335923
Alignment:
Q  319 tttactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||||| ||||||||||||||| ||||||||||||    
T  45335883 tttactccctccctccctaattataagacccttttgagaat 45335923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Complemental strand, 943675 - 943636
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  943675 ttactccctccgtccctaattataagacccttttgagaat 943636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Complemental strand, 15811270 - 15811231
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  15811270 ttactccctccgtccctaattataagacccttttgagaat 15811231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Complemental strand, 39363232 - 39363193
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  39363232 ttactccctccgtccctaattataagacccttttgagaat 39363193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Original strand, 44649628 - 44649667
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  44649628 ttactccctccgtccctaattataagacccttttgagaat 44649667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Original strand, 49907020 - 49907059
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  49907020 ttactccctccgtccctaattataagacccttttgagaat 49907059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 1039418 - 1039380
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  1039418 tactccctccgtccctaattataagacccttttgagaat 1039380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 1046324 - 1046286
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  1046324 tactccctccgtccctaattataagacccttttgagaat 1046286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 4102751 - 4102713
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  4102751 tactccctccgtccctaattataagacccttttgagaat 4102713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 11741397 - 11741435
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  11741397 tactccctccgtccctaattataagacccttttgagaat 11741435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 355
Target Start/End: Complemental strand, 15302781 - 15302747
Alignment:
Q  321 tactccctccatccctaattataagatccttttga 355  Q
    |||| ||||||||||||||||||||||||||||||    
T  15302781 tactacctccatccctaattataagatccttttga 15302747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 23541979 - 23542017
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  23541979 tactccctccgtccctaattataagacccttttgagaat 23542017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 355
Target Start/End: Complemental strand, 28888461 - 28888427
Alignment:
Q  321 tactccctccatccctaattataagatccttttga 355  Q
    |||| ||||||||||||||||||||||||||||||    
T  28888461 tactacctccatccctaattataagatccttttga 28888427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 358
Target Start/End: Original strand, 30290264 - 30290302
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaa 358  Q
    ||||||||||| ||||||||||||||| |||||||||||    
T  30290264 ttactccctccgtccctaattataagacccttttgagaa 30290302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 36694854 - 36694892
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  36694854 tactccctccgtccctaattataagacccttttgagaat 36694892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 36710955 - 36710993
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  36710955 tactccctccgtccctaattataagacccttttgagaat 36710993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 37951986 - 37951948
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  37951986 tactccctccgtccctaattataagacccttttgagaat 37951948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 39497433 - 39497471
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  39497433 tactccctccgtccctaattataagacccttttgagaat 39497471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 45039412 - 45039450
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  45039412 tactccctccgtccctaattataagacccttttgagaat 45039450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 46075904 - 46075866
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  46075904 tactccctccgtccctaattataagacccttttgagaat 46075866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 50008520 - 50008482
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  50008520 tactccctccgtccctaattataagatcattttgagaat 50008482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 50246966 - 50246928
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  50246966 tactccctccgtccgtaattataagatccttttgagaat 50246928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 52431211 - 52431173
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  52431211 tactccctccgtccctaattataagacccttttgagaat 52431173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 358
Target Start/End: Original strand, 22567066 - 22567103
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaa 358  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  22567066 tactacctccgtccctaattataagatccttttgagaa 22567103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 359
Target Start/End: Complemental strand, 30289898 - 30289861
Alignment:
Q  322 actccctccatccctaattataagatccttttgagaat 359  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  30289898 actccctccgtccctaattataagacccttttgagaat 30289861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Original strand, 117845 - 117884
Alignment:
Q  320 ttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  117845 ttacttcctccgtccctaattataagatccttttgagaat 117884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 3819 - 3781
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  3819 tactccctccgtccctaattataagacccttttgagaat 3781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 9463 - 9425
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  9463 tactacctccgtccctaattataagatccttttgagaat 9425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 12065 - 12103
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  12065 tactccctccgtccctaattataagacccttttgagaat 12103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 24667 - 24629
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  24667 tactccctccgttcctaattataagatccttttgagaat 24629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 51719 - 51681
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  51719 tactccctccgtccctaattataagacccttttgagaat 51681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 47640 - 47678
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  47640 tactccctccgtccctaattataagacccttttgagaat 47678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 354
Target Start/End: Complemental strand, 47937 - 47904
Alignment:
Q  321 tactccctccatccctaattataagatccttttg 354  Q
    |||||||||| |||||||||||||||||||||||    
T  47937 tactccctccgtccctaattataagatccttttg 47904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 259159 - 259121
Alignment:
Q  321 tactccctccatccctaattataagatccttttgagaat 359  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  259159 tactccctccgtccctaattataagacccttttgagaat 259121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 359
Target Start/End: Complemental strand, 7180 - 7139
Alignment:
Q  318 ttttactccctccatccctaattataagatccttttgagaat 359  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||    
T  7180 ttttacttcctccgtccctaattataagacccttttgagaat 7139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 359
Target Start/End: Complemental strand, 104100 - 104060
Alignment:
Q  319 tttactccctccatccctaattataagatccttttgagaat 359  Q
    |||||| ||||| ||||||||||||||||| ||||||||||    
T  104100 tttactacctccgtccctaattataagatctttttgagaat 104060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University