View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15182_high_35 (Length: 395)

Name: NF15182_high_35
Description: NF15182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15182_high_35
NF15182_high_35
[»] chr4 (95 HSPs)
chr4 (27-169)||(52957850-52957993)
chr4 (29-171)||(52253797-52253943)
chr4 (27-159)||(52848114-52848247)
chr4 (80-169)||(4505291-4505380)
chr4 (27-169)||(19878603-19878745)
chr4 (81-176)||(54042298-54042393)
chr4 (28-169)||(19930668-19930810)
chr4 (81-161)||(30261221-30261301)
chr4 (27-169)||(44571925-44572070)
chr4 (28-176)||(45043649-45043798)
chr4 (27-158)||(1819528-1819659)
chr4 (27-162)||(40345407-40345542)
chr4 (80-162)||(52915656-52915738)
chr4 (27-169)||(49089415-49089560)
chr4 (33-162)||(24940840-24940970)
chr4 (80-154)||(25231144-25231218)
chr4 (80-169)||(37624511-37624599)
chr4 (27-169)||(37654365-37654506)
chr4 (80-169)||(47817690-47817781)
chr4 (31-164)||(49080541-49080674)
chr4 (80-162)||(50203039-50203117)
chr4 (81-160)||(51733609-51733689)
chr4 (27-162)||(41920369-41920505)
chr4 (27-163)||(28734557-28734695)
chr4 (81-160)||(33033043-33033120)
chr4 (102-169)||(34124246-34124313)
chr4 (27-163)||(34316182-34316319)
chr4 (80-170)||(2728512-2728602)
chr4 (87-169)||(31817293-31817375)
chr4 (80-154)||(10573268-10573344)
chr4 (28-160)||(27653639-27653770)
chr4 (80-173)||(44060958-44061051)
chr4 (81-149)||(2493076-2493144)
chr4 (80-169)||(19451325-19451416)
chr4 (102-169)||(21045108-21045174)
chr4 (82-169)||(31917911-31917997)
chr4 (132-175)||(34124497-34124540)
chr4 (80-162)||(38991875-38991959)
chr4 (96-163)||(56555832-56555901)
chr4 (80-117)||(39982109-39982146)
chr4 (80-170)||(40837079-40837173)
chr4 (102-163)||(50072238-50072299)
chr4 (102-167)||(52732552-52732617)
chr4 (80-148)||(27943660-27943727)
chr4 (80-164)||(29370563-29370646)
chr4 (80-160)||(29519639-29519718)
chr4 (102-169)||(29840026-29840093)
chr4 (109-164)||(30105877-30105932)
chr4 (80-159)||(41496169-41496248)
chr4 (108-170)||(36805583-36805645)
chr4 (102-175)||(6461954-6462027)
chr4 (27-117)||(20448045-20448136)
chr4 (80-117)||(21864497-21864534)
chr4 (80-117)||(21920358-21920395)
chr4 (80-169)||(22220473-22220562)
chr4 (132-169)||(37654614-37654651)
chr4 (84-125)||(40010992-40011033)
chr4 (81-162)||(46392176-46392256)
chr4 (102-162)||(28116203-28116263)
chr4 (102-162)||(44855200-44855260)
chr4 (102-162)||(45520591-45520651)
chr4 (80-124)||(45839636-45839680)
chr4 (80-163)||(7906110-7906193)
chr4 (81-159)||(24157151-24157227)
chr4 (98-172)||(30780257-30780329)
chr4 (102-160)||(3093313-3093371)
chr4 (81-155)||(6991376-6991450)
chr4 (81-170)||(8970994-8971084)
chr4 (136-178)||(25231372-25231414)
chr4 (128-170)||(32141123-32141165)
chr4 (27-69)||(42605627-42605669)
chr4 (132-162)||(45889765-45889795)
chr4 (102-164)||(51930556-51930618)
chr4 (136-166)||(52915472-52915502)
chr4 (27-69)||(53814557-53814599)
chr4 (80-161)||(11364188-11364269)
chr4 (132-169)||(18430193-18430230)
chr4 (136-169)||(22220286-22220319)
chr4 (132-169)||(29519441-29519478)
chr4 (132-169)||(29840255-29840292)
chr4 (132-169)||(30492920-30492957)
chr4 (132-169)||(31941757-31941794)
chr4 (136-169)||(38991679-38991712)
chr4 (128-169)||(39009386-39009427)
chr4 (132-169)||(39985021-39985058)
chr4 (132-169)||(47321347-47321384)
chr4 (136-169)||(50621355-50621388)
chr4 (102-163)||(51434391-51434452)
chr4 (27-69)||(56373635-56373679)
chr4 (29-69)||(2493157-2493197)
chr4 (86-169)||(17499835-17499919)
chr4 (33-69)||(18430044-18430080)
chr4 (132-164)||(24941084-24941116)
chr4 (132-164)||(54234018-54234050)
chr4 (80-124)||(56460082-56460126)
[»] chr7 (86 HSPs)
chr7 (27-183)||(27947555-27947713)
chr7 (272-354)||(27947866-27947949)
chr7 (27-169)||(1741946-1742088)
chr7 (27-169)||(40339413-40339555)
chr7 (81-166)||(715972-716056)
chr7 (82-165)||(2296996-2297079)
chr7 (80-159)||(34274758-34274837)
chr7 (27-154)||(44453104-44453232)
chr7 (28-176)||(45948685-45948835)
chr7 (80-162)||(22297959-22298039)
chr7 (249-319)||(27947794-27947865)
chr7 (80-169)||(18292288-18292378)
chr7 (80-169)||(12977794-12977883)
chr7 (80-163)||(8603934-8604018)
chr7 (80-163)||(34012123-34012204)
chr7 (81-169)||(44567150-44567238)
chr7 (80-169)||(19105109-19105199)
chr7 (27-169)||(6747180-6747322)
chr7 (81-162)||(37490745-37490826)
chr7 (249-349)||(27999346-27999443)
chr7 (81-161)||(45499936-45500016)
chr7 (81-164)||(8334381-8334464)
chr7 (27-162)||(13405181-13405318)
chr7 (27-162)||(31418567-31418706)
chr7 (80-169)||(32501857-32501946)
chr7 (81-154)||(42285877-42285950)
chr7 (27-164)||(41137688-41137825)
chr7 (80-159)||(18270541-18270620)
chr7 (81-168)||(24780415-24780501)
chr7 (80-162)||(27935727-27935810)
chr7 (102-169)||(43813476-43813543)
chr7 (82-164)||(4268570-4268652)
chr7 (31-162)||(23935382-23935514)
chr7 (80-161)||(25440833-25440915)
chr7 (80-169)||(10599168-10599256)
chr7 (81-162)||(37815685-37815766)
chr7 (80-154)||(10476108-10476179)
chr7 (81-169)||(39557277-39557364)
chr7 (102-170)||(40298801-40298869)
chr7 (24-117)||(42879985-42880079)
chr7 (81-133)||(48843542-48843594)
chr7 (90-169)||(44057718-44057797)
chr7 (107-169)||(36912062-36912124)
chr7 (83-158)||(45933695-45933772)
chr7 (102-163)||(22597191-22597252)
chr7 (80-125)||(24680126-24680171)
chr7 (27-154)||(29530989-29531121)
chr7 (102-162)||(32345967-32346028)
chr7 (80-117)||(40927169-40927206)
chr7 (102-162)||(18733415-18733475)
chr7 (87-170)||(17869191-17869274)
chr7 (81-172)||(31929969-31930060)
chr7 (102-165)||(36836018-36836081)
chr7 (80-158)||(21752219-21752296)
chr7 (80-162)||(37502281-37502362)
chr7 (106-176)||(40799938-40800008)
chr7 (80-165)||(18528587-18528671)
chr7 (81-154)||(33682498-33682571)
chr7 (106-171)||(40207513-40207578)
chr7 (132-169)||(40299042-40299079)
chr7 (80-117)||(48684729-48684766)
chr7 (81-125)||(24133239-24133283)
chr7 (106-170)||(30514927-30514991)
chr7 (102-169)||(28044263-28044329)
chr7 (80-131)||(42753700-42753751)
chr7 (81-158)||(21819251-21819326)
chr7 (80-158)||(29636335-29636413)
chr7 (81-162)||(30312416-30312500)
chr7 (80-117)||(1031161-1031198)
chr7 (132-169)||(1742195-1742232)
chr7 (109-158)||(10684969-10685018)
chr7 (86-159)||(16565214-16565286)
chr7 (86-159)||(16600376-16600448)
chr7 (136-169)||(18270775-18270808)
chr7 (128-169)||(19906368-19906409)
chr7 (132-169)||(19906618-19906655)
chr7 (132-169)||(22298205-22298242)
chr7 (132-169)||(32345746-32345783)
chr7 (80-125)||(33939842-33939887)
chr7 (106-155)||(35850559-35850608)
chr7 (132-169)||(37815928-37815965)
chr7 (132-169)||(42121746-42121783)
chr7 (128-169)||(48684671-48684712)
chr7 (135-175)||(715778-715818)
chr7 (106-162)||(36447206-36447261)
chr7 (102-170)||(42044111-42044179)
[»] scaffold0565 (2 HSPs)
scaffold0565 (28-166)||(9698-9837)
scaffold0565 (132-169)||(9572-9609)
[»] chr5 (75 HSPs)
chr5 (27-162)||(14620550-14620686)
chr5 (27-154)||(39566152-39566280)
chr5 (29-171)||(42104121-42104265)
chr5 (27-169)||(2729842-2729985)
chr5 (34-170)||(21319373-21319510)
chr5 (80-169)||(10345042-10345132)
chr5 (80-164)||(7316987-7317071)
chr5 (80-177)||(42978176-42978273)
chr5 (27-169)||(3306065-3306207)
chr5 (80-176)||(3025041-3025137)
chr5 (80-169)||(26660707-26660798)
chr5 (80-169)||(26932300-26932391)
chr5 (87-162)||(21375768-21375842)
chr5 (80-162)||(27797743-27797824)
chr5 (28-169)||(39504676-39504819)
chr5 (80-159)||(36164853-36164930)
chr5 (80-162)||(31041887-31041970)
chr5 (80-175)||(38369821-38369915)
chr5 (27-169)||(34446083-34446226)
chr5 (81-173)||(21195329-21195421)
chr5 (28-163)||(34208951-34209091)
chr5 (80-164)||(43584487-43584571)
chr5 (102-169)||(793737-793804)
chr5 (27-154)||(6518944-6519073)
chr5 (82-172)||(4911262-4911351)
chr5 (81-158)||(24280960-24281035)
chr5 (81-158)||(24381177-24381252)
chr5 (80-162)||(31055698-31055780)
chr5 (80-158)||(39729924-39730002)
chr5 (27-160)||(13761522-13761654)
chr5 (84-172)||(842972-843060)
chr5 (81-169)||(9066534-9066622)
chr5 (102-169)||(166780-166847)
chr5 (102-169)||(4967544-4967611)
chr5 (80-170)||(7579979-7580068)
chr5 (80-169)||(15167120-15167210)
chr5 (88-169)||(39804166-39804248)
chr5 (102-170)||(34171118-34171186)
chr5 (102-170)||(36660381-36660449)
chr5 (102-169)||(14980170-14980237)
chr5 (80-155)||(40776686-40776761)
chr5 (102-169)||(4751662-4751731)
chr5 (85-163)||(15776593-15776670)
chr5 (120-170)||(32158526-32158576)
chr5 (27-69)||(39335260-39335302)
chr5 (27-69)||(42661996-42662038)
chr5 (80-169)||(4630820-4630908)
chr5 (28-154)||(8336466-8336593)
chr5 (80-161)||(40330822-40330902)
chr5 (81-169)||(24381072-24381159)
chr5 (102-162)||(38982276-38982336)
chr5 (107-170)||(15566451-15566514)
chr5 (80-169)||(38362247-38362335)
chr5 (136-170)||(7317221-7317255)
chr5 (27-69)||(21375707-21375749)
chr5 (80-162)||(27600361-27600442)
chr5 (80-162)||(36073740-36073821)
chr5 (132-170)||(38982065-38982103)
chr5 (136-169)||(4631127-4631160)
chr5 (136-169)||(10344855-10344888)
chr5 (81-169)||(24281053-24281139)
chr5 (102-163)||(24436591-24436652)
chr5 (102-175)||(28640031-28640104)
chr5 (28-69)||(29807372-29807413)
chr5 (28-69)||(34534414-34534454)
chr5 (80-117)||(35766010-35766047)
chr5 (132-169)||(36783559-36783596)
chr5 (132-169)||(42103975-42104012)
chr5 (137-169)||(4371559-4371591)
chr5 (102-169)||(4742398-4742466)
chr5 (80-164)||(7721056-7721139)
chr5 (132-164)||(24436457-24436489)
chr5 (107-175)||(28797980-28798048)
chr5 (102-162)||(33585106-33585166)
chr5 (102-170)||(33822634-33822702)
[»] chr8 (65 HSPs)
chr8 (80-169)||(39463213-39463302)
chr8 (28-169)||(39698723-39698864)
chr8 (27-164)||(17920915-17921053)
chr8 (80-163)||(15160556-15160639)
chr8 (27-164)||(4989438-4989575)
chr8 (80-160)||(9812136-9812216)
chr8 (80-175)||(37559643-37559738)
chr8 (80-159)||(39765969-39766048)
chr8 (28-159)||(43084684-43084814)
chr8 (28-159)||(7839422-7839554)
chr8 (80-162)||(40362396-40362478)
chr8 (27-169)||(4760614-4760756)
chr8 (80-169)||(29312303-29312391)
chr8 (80-162)||(6116115-6116197)
chr8 (81-169)||(9880612-9880699)
chr8 (81-169)||(14234329-14234416)
chr8 (81-169)||(43724336-43724423)
chr8 (80-163)||(31693731-31693814)
chr8 (27-169)||(31899304-31899446)
chr8 (80-169)||(44713488-44713577)
chr8 (81-172)||(514827-514916)
chr8 (88-171)||(22699335-22699418)
chr8 (81-163)||(9304744-9304826)
chr8 (80-162)||(43448678-43448759)
chr8 (102-162)||(38329161-38329221)
chr8 (80-170)||(396323-396413)
chr8 (80-162)||(6374374-6374457)
chr8 (100-163)||(15750431-15750494)
chr8 (80-162)||(35356270-35356350)
chr8 (87-169)||(8471235-8471317)
chr8 (91-169)||(9022349-9022427)
chr8 (80-154)||(29025856-29025930)
chr8 (107-169)||(35052425-35052487)
chr8 (81-163)||(43561299-43561381)
chr8 (80-141)||(40228556-40228617)
chr8 (102-170)||(22601089-22601157)
chr8 (128-162)||(18673256-18673290)
chr8 (91-169)||(27109941-27110019)
chr8 (131-169)||(34168367-34168405)
chr8 (81-162)||(15227529-15227609)
chr8 (80-117)||(43974901-43974938)
chr8 (81-154)||(45359005-45359078)
chr8 (106-162)||(1774195-1774251)
chr8 (28-133)||(19438226-19438332)
chr8 (128-164)||(36669885-36669921)
chr8 (128-163)||(41178396-41178431)
chr8 (132-162)||(4530070-4530100)
chr8 (137-171)||(6839415-6839449)
chr8 (102-176)||(7612445-7612519)
chr8 (87-169)||(18666637-18666719)
chr8 (28-69)||(5295464-5295504)
chr8 (132-169)||(9022599-9022636)
chr8 (28-69)||(9304690-9304731)
chr8 (80-169)||(13368058-13368147)
chr8 (28-69)||(19574442-19574483)
chr8 (102-151)||(21200966-21201014)
chr8 (88-169)||(32414681-32414762)
chr8 (28-69)||(34156590-34156630)
chr8 (132-169)||(34168124-34168161)
chr8 (81-166)||(34796789-34796874)
chr8 (132-169)||(39463461-39463498)
chr8 (136-169)||(39765783-39765816)
chr8 (81-117)||(5295517-5295553)
chr8 (105-161)||(5790827-5790883)
chr8 (133-169)||(11168888-11168924)
[»] scaffold0110 (1 HSPs)
scaffold0110 (27-162)||(24796-24932)
[»] chr6 (36 HSPs)
chr6 (27-170)||(233987-234131)
chr6 (81-176)||(24163825-24163919)
chr6 (81-170)||(29399899-29399988)
chr6 (80-169)||(10540618-10540707)
chr6 (27-161)||(23259381-23259516)
chr6 (28-162)||(9940609-9940743)
chr6 (81-160)||(32193665-32193744)
chr6 (80-158)||(4850605-4850683)
chr6 (80-159)||(18737200-18737277)
chr6 (91-169)||(17246728-17246804)
chr6 (80-162)||(32429247-32429327)
chr6 (80-170)||(13503958-13504048)
chr6 (80-169)||(19674936-19675023)
chr6 (81-169)||(12063621-12063710)
chr6 (80-160)||(31443556-31443636)
chr6 (80-169)||(21272212-21272301)
chr6 (82-162)||(12322996-12323075)
chr6 (82-154)||(17552357-17552429)
chr6 (102-162)||(29927169-29927228)
chr6 (80-162)||(577024-577104)
chr6 (106-169)||(1924799-1924862)
chr6 (81-162)||(3988854-3988933)
chr6 (85-154)||(1502854-1502923)
chr6 (81-148)||(31233736-31233804)
chr6 (81-159)||(10520750-10520827)
chr6 (27-169)||(29713462-29713606)
chr6 (102-162)||(31275773-31275833)
chr6 (102-160)||(6140564-6140621)
chr6 (80-122)||(12588527-12588569)
chr6 (102-164)||(17345267-17345328)
chr6 (108-162)||(26189469-26189523)
chr6 (108-162)||(34519263-34519317)
chr6 (28-69)||(1134980-1135021)
chr6 (136-169)||(30627289-30627322)
chr6 (132-176)||(234229-234273)
chr6 (106-162)||(28554740-28554796)
[»] chr2 (94 HSPs)
chr2 (80-169)||(4132978-4133067)
chr2 (28-162)||(12342054-12342189)
chr2 (27-172)||(45081956-45082102)
chr2 (27-169)||(29396736-29396879)
chr2 (27-155)||(38926576-38926703)
chr2 (27-162)||(13561954-13562091)
chr2 (80-158)||(43427397-43427475)
chr2 (27-171)||(29808766-29808909)
chr2 (81-169)||(34546442-34546529)
chr2 (80-160)||(36177939-36178019)
chr2 (80-163)||(12394031-12394114)
chr2 (27-169)||(441287-441431)
chr2 (80-154)||(18719542-18719616)
chr2 (80-169)||(17702973-17703062)
chr2 (27-169)||(35799157-35799298)
chr2 (80-169)||(27964480-27964572)
chr2 (81-162)||(5717475-5717555)
chr2 (28-162)||(6220461-6220596)
chr2 (80-171)||(16792437-16792526)
chr2 (80-164)||(43971463-43971547)
chr2 (81-164)||(4051815-4051898)
chr2 (80-169)||(8789536-8789625)
chr2 (80-169)||(17695935-17696023)
chr2 (28-154)||(30855074-30855200)
chr2 (102-169)||(43388788-43388855)
chr2 (80-162)||(4469463-4469544)
chr2 (80-170)||(22620444-22620534)
chr2 (80-162)||(25383594-25383675)
chr2 (80-169)||(8539992-8540081)
chr2 (80-125)||(45301763-45301808)
chr2 (80-160)||(777733-777813)
chr2 (105-169)||(6247675-6247739)
chr2 (81-160)||(12566091-12566171)
chr2 (102-169)||(4536528-4536595)
chr2 (80-162)||(11188602-11188682)
chr2 (102-169)||(24775143-24775210)
chr2 (81-163)||(16807628-16807709)
chr2 (81-163)||(16846909-16846990)
chr2 (80-162)||(32228121-32228202)
chr2 (88-154)||(34035865-34035930)
chr2 (107-169)||(38809567-38809629)
chr2 (27-69)||(42004946-42004988)
chr2 (80-169)||(8774010-8774099)
chr2 (81-162)||(18579125-18579209)
chr2 (81-162)||(32254554-32254634)
chr2 (81-154)||(36685851-36685923)
chr2 (83-162)||(7028925-7029002)
chr2 (80-160)||(14285902-14285981)
chr2 (82-169)||(33482341-33482429)
chr2 (80-162)||(10195537-10195617)
chr2 (102-169)||(10580989-10581055)
chr2 (102-169)||(34225728-34225794)
chr2 (84-159)||(37038880-37038954)
chr2 (132-174)||(441138-441180)
chr2 (87-169)||(2459727-2459809)
chr2 (81-155)||(4288822-4288896)
chr2 (81-162)||(4658344-4658423)
chr2 (80-159)||(15083262-15083343)
chr2 (102-175)||(1298911-1298984)
chr2 (81-154)||(9366230-9366302)
chr2 (102-159)||(14697976-14698033)
chr2 (80-125)||(28072565-28072610)
chr2 (80-125)||(29411694-29411739)
chr2 (80-125)||(35046516-35046561)
chr2 (83-162)||(7042299-7042376)
chr2 (80-160)||(7874754-7874832)
chr2 (105-169)||(43344355-43344418)
chr2 (132-171)||(12342297-12342336)
chr2 (90-169)||(37724201-37724280)
chr2 (132-175)||(43388563-43388606)
chr2 (132-170)||(29396591-29396629)
chr2 (87-161)||(39866789-39866863)
chr2 (27-69)||(42743084-42743126)
chr2 (136-169)||(1298692-1298725)
chr2 (28-69)||(1423246-1423287)
chr2 (132-169)||(4133226-4133263)
chr2 (136-169)||(14286127-14286160)
chr2 (80-125)||(14833845-14833890)
chr2 (80-117)||(16463142-16463179)
chr2 (24-69)||(16807570-16807615)
chr2 (24-69)||(16846851-16846896)
chr2 (136-169)||(22620257-22620290)
chr2 (84-125)||(27986034-27986075)
chr2 (80-117)||(40608714-40608750)
chr2 (136-169)||(43427211-43427244)
chr2 (102-162)||(776016-776075)
chr2 (102-162)||(4840858-4840917)
chr2 (102-162)||(14378355-14378414)
chr2 (102-169)||(18374895-18374963)
chr2 (111-171)||(25332523-25332583)
chr2 (102-162)||(29795321-29795381)
chr2 (102-170)||(33093321-33093389)
chr2 (86-154)||(36106515-36106582)
chr2 (98-162)||(43480999-43481063)
[»] chr1 (81 HSPs)
chr1 (80-169)||(32807046-32807135)
chr1 (27-169)||(48025308-48025451)
chr1 (27-162)||(15822995-15823131)
chr1 (80-170)||(29567849-29567939)
chr1 (80-169)||(50249264-50249353)
chr1 (27-162)||(9915404-9915540)
chr1 (80-162)||(26755181-26755263)
chr1 (80-166)||(30292897-30292983)
chr1 (80-169)||(16757302-16757390)
chr1 (81-169)||(34032189-34032277)
chr1 (80-171)||(46554752-46554841)
chr1 (81-170)||(38531406-38531494)
chr1 (80-175)||(25151764-25151858)
chr1 (1-170)||(31491798-31491968)
chr1 (81-169)||(44258616-44258706)
chr1 (80-163)||(15573565-15573650)
chr1 (80-169)||(5463530-5463618)
chr1 (89-169)||(7375243-7375323)
chr1 (80-164)||(14373521-14373605)
chr1 (27-160)||(49468765-49468899)
chr1 (102-169)||(2458962-2459029)
chr1 (80-159)||(10842745-10842823)
chr1 (80-162)||(34047343-34047426)
chr1 (80-162)||(12591190-12591272)
chr1 (80-170)||(25487042-25487131)
chr1 (80-162)||(27720920-27721001)
chr1 (80-162)||(44557152-44557233)
chr1 (30-160)||(52125193-52125325)
chr1 (27-169)||(24611574-24611716)
chr1 (80-153)||(26352189-26352262)
chr1 (80-171)||(18794650-18794741)
chr1 (81-169)||(39477816-39477904)
chr1 (80-159)||(27208954-27209032)
chr1 (80-171)||(46045926-46046016)
chr1 (102-164)||(672398-672460)
chr1 (80-158)||(31798555-31798632)
chr1 (27-169)||(44108552-44108696)
chr1 (80-169)||(13408373-13408462)
chr1 (27-117)||(50094235-50094326)
chr1 (106-170)||(12002199-12002263)
chr1 (81-121)||(14593429-14593469)
chr1 (80-158)||(1740749-1740828)
chr1 (80-170)||(24884365-24884458)
chr1 (80-154)||(24483358-24483431)
chr1 (81-162)||(2610939-2611019)
chr1 (80-164)||(43358308-43358393)
chr1 (81-169)||(49426524-49426609)
chr1 (81-133)||(26595178-26595230)
chr1 (82-125)||(38947653-38947696)
chr1 (91-169)||(43929638-43929717)
chr1 (107-169)||(28200361-28200423)
chr1 (102-164)||(38132299-38132360)
chr1 (81-162)||(40717405-40717487)
chr1 (132-170)||(48259774-48259812)
chr1 (102-175)||(84625-84698)
chr1 (102-163)||(5317708-5317769)
chr1 (28-69)||(15573666-15573707)
chr1 (102-163)||(17806506-17806567)
chr1 (28-69)||(43759387-43759428)
chr1 (81-162)||(52024343-52024423)
chr1 (136-176)||(48009218-48009258)
chr1 (102-165)||(24041132-24041195)
chr1 (80-115)||(34110535-34110570)
chr1 (80-148)||(35848041-35848111)
chr1 (132-175)||(48319911-48319954)
chr1 (26-69)||(52066342-52066385)
chr1 (135-169)||(9915651-9915685)
chr1 (132-170)||(15573817-15573855)
chr1 (132-170)||(28751319-28751357)
chr1 (132-169)||(2459209-2459246)
chr1 (136-169)||(4471319-4471352)
chr1 (132-169)||(11134372-11134409)
chr1 (128-169)||(11134620-11134661)
chr1 (132-169)||(13408246-13408283)
chr1 (102-175)||(15647192-15647265)
chr1 (128-161)||(29296901-29296934)
chr1 (105-162)||(43105715-43105772)
chr1 (109-170)||(44024498-44024559)
chr1 (128-169)||(50591452-50591493)
chr1 (136-164)||(25487281-25487309)
chr1 (81-117)||(46271426-46271462)
[»] chr3 (89 HSPs)
chr3 (27-169)||(33194084-33194226)
chr3 (80-163)||(42571636-42571719)
chr3 (80-170)||(45213829-45213917)
chr3 (80-162)||(38016337-38016418)
chr3 (27-162)||(50088369-50088505)
chr3 (28-169)||(3152860-3153001)
chr3 (80-163)||(50038278-50038361)
chr3 (27-169)||(30431075-30431217)
chr3 (28-162)||(51397971-51398106)
chr3 (80-170)||(32492288-32492375)
chr3 (80-171)||(19115340-19115430)
chr3 (80-159)||(53200787-53200866)
chr3 (80-162)||(2457969-2458050)
chr3 (81-165)||(30934917-30934998)
chr3 (27-157)||(36460774-36460903)
chr3 (80-162)||(39356846-39356928)
chr3 (80-162)||(50646217-50646299)
chr3 (81-162)||(31583542-31583623)
chr3 (80-165)||(33024407-33024492)
chr3 (33-163)||(41850350-41850481)
chr3 (80-175)||(23208398-23208490)
chr3 (85-169)||(41287611-41287694)
chr3 (102-170)||(44648532-44648600)
chr3 (88-160)||(51058267-51058339)
chr3 (80-163)||(30315270-30315352)
chr3 (80-162)||(38140913-38140993)
chr3 (80-170)||(4758944-4759034)
chr3 (80-169)||(42886704-42886794)
chr3 (80-169)||(4392150-4392239)
chr3 (28-154)||(30426378-30426509)
chr3 (81-169)||(35557866-35557954)
chr3 (27-162)||(36729863-36729996)
chr3 (80-160)||(44676181-44676264)
chr3 (102-169)||(43580430-43580497)
chr3 (81-162)||(11019934-11020014)
chr3 (27-131)||(11393537-11393642)
chr3 (102-169)||(20512628-20512694)
chr3 (102-169)||(25722592-25722659)
chr3 (81-164)||(36844850-36844933)
chr3 (102-169)||(37225726-37225793)
chr3 (80-159)||(38363750-38363828)
chr3 (80-162)||(48901678-48901763)
chr3 (80-162)||(48903244-48903329)
chr3 (102-169)||(54261370-54261437)
chr3 (107-169)||(6938194-6938256)
chr3 (107-163)||(2662613-2662669)
chr3 (90-170)||(54918065-54918145)
chr3 (81-156)||(31853670-31853745)
chr3 (80-162)||(19373547-19373629)
chr3 (102-168)||(41287032-41287098)
chr3 (102-164)||(43688017-43688079)
chr3 (132-170)||(44648321-44648359)
chr3 (80-159)||(47895451-47895534)
chr3 (132-169)||(23525225-23525262)
chr3 (81-162)||(23525424-23525505)
chr3 (102-162)||(790058-790118)
chr3 (80-160)||(9189542-9189621)
chr3 (102-162)||(25061667-25061726)
chr3 (102-154)||(32304036-32304087)
chr3 (88-176)||(42939916-42940004)
chr3 (106-170)||(43169288-43169352)
chr3 (102-169)||(1341051-1341117)
chr3 (100-159)||(45392009-45392068)
chr3 (132-171)||(52222760-52222799)
chr3 (102-164)||(4391864-4391926)
chr3 (132-170)||(4392099-4392137)
chr3 (103-153)||(26187408-26187458)
chr3 (102-160)||(26965630-26965688)
chr3 (132-170)||(31290885-31290923)
chr3 (27-69)||(38363846-38363888)
chr3 (27-69)||(41287549-41287591)
chr3 (80-134)||(42071974-42072028)
chr3 (128-162)||(44645301-44645335)
chr3 (132-170)||(47895252-47895290)
chr3 (107-169)||(53560620-53560682)
chr3 (120-169)||(647740-647789)
chr3 (102-162)||(19552501-19552562)
chr3 (27-68)||(31853615-31853656)
chr3 (92-169)||(39168387-39168464)
chr3 (132-169)||(41287405-41287442)
chr3 (128-169)||(42791282-42791323)
chr3 (100-169)||(45566761-45566829)
chr3 (80-125)||(47137961-47138006)
chr3 (132-169)||(51398214-51398251)
chr3 (132-169)||(54261621-54261658)
chr3 (132-164)||(2988525-2988557)
chr3 (102-169)||(2988740-2988808)
chr3 (33-69)||(13756932-13756968)
chr3 (134-162)||(16240773-16240801)
[»] scaffold0332 (1 HSPs)
scaffold0332 (80-171)||(3920-4011)
[»] scaffold0048 (1 HSPs)
scaffold0048 (29-169)||(62587-62728)
[»] scaffold0294 (1 HSPs)
scaffold0294 (27-174)||(3560-3708)
[»] scaffold2107 (1 HSPs)
scaffold2107 (81-162)||(624-704)
[»] scaffold0013 (1 HSPs)
scaffold0013 (98-170)||(45347-45419)
[»] scaffold0047 (1 HSPs)
scaffold0047 (102-169)||(70586-70653)
[»] scaffold0182 (1 HSPs)
scaffold0182 (80-162)||(18364-18446)
[»] scaffold0078 (1 HSPs)
scaffold0078 (28-159)||(1470-1601)
[»] scaffold0502 (1 HSPs)
scaffold0502 (27-169)||(628-770)
[»] scaffold0015 (1 HSPs)
scaffold0015 (28-162)||(21138-21273)
[»] scaffold0983 (1 HSPs)
scaffold0983 (81-170)||(797-884)
[»] scaffold0026 (1 HSPs)
scaffold0026 (81-162)||(4101-4183)
[»] scaffold0580 (2 HSPs)
scaffold0580 (102-169)||(1595-1662)
scaffold0580 (102-169)||(9334-9401)
[»] scaffold0136 (1 HSPs)
scaffold0136 (100-169)||(9407-9475)
[»] scaffold0039 (1 HSPs)
scaffold0039 (81-162)||(75410-75490)
[»] scaffold0189 (1 HSPs)
scaffold0189 (102-162)||(13190-13250)
[»] scaffold0003 (1 HSPs)
scaffold0003 (102-168)||(321683-321747)
[»] scaffold0007 (1 HSPs)
scaffold0007 (132-170)||(158292-158330)


Alignment Details
Target: chr4 (Bit Score: 78; Significance: 3e-36; HSPs: 95)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 27 - 169
Target Start/End: Original strand, 52957850 - 52957993
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||| ||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||  ||||||    
T  52957850 ctttggaagtagtgtaacataatattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 52957949  T
Q  126 acttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
       ||||||||||||||||||||||||||||||| |||||||||    
T  52957950 ttctttttggctaaaacgacactcattttgaaacagaggaagta 52957993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 29 - 171
Target Start/End: Complemental strand, 52253943 - 52253797
Alignment:
Q  29 ttggaagtagtgtagcataatattaattgaagggtacaatt----nnnnnnnnnngttattattgcattggaaactgaaagtgacattcatttaaaaaca 124  Q
    |||||||||||| | ||||||||||||||||||||||||||              ||||||||||||||||||||||||||||||||||||||  |||||    
T  52253943 ttggaagtagtggaacataatattaattgaagggtacaattgaaaaaaagaagaagttattattgcattggaaactgaaagtgacattcattttgaaaca 52253844  T
Q  125 aacttttttggctaaaacgacactcattttgaaacggaggaagtaaa 171  Q
    |  ||||||||||||||||||| ||||||||||||||||| ||||||    
T  52253843 attttttttggctaaaacgacattcattttgaaacggagggagtaaa 52253797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 27 - 159
Target Start/End: Original strand, 52848114 - 52848247
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnng-ttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||| ||||||||||||||||||||||||||            |||||||||||||||||| |||||||||||||||||| |||||||    
T  52848114 ctttggaagtagtgtaacataatattaattgaagggtacaattgaaaagaaaaaattattattgcattggaaattgaaagtgacattcattttaaaacaa 52848213  T
Q  126 acttttttggctaaaacgacactcattttgaaac 159  Q
      |||||| |||||||||||||||||||| ||||    
T  52848214 tttttttttgctaaaacgacactcattttaaaac 52848247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 4505380 - 4505291
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||  |||||| |||||| ||||||||||||||||||||||| ||||    
T  4505380 gttattattgcattggaaactgaaagtgacattcattttgaaacaatttttttttgctaaagcgacactcattttgaaacggagggagta 4505291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 169
Target Start/End: Complemental strand, 19878745 - 19878603
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||| |||| ||| |||||||||||||||||           ||||||||||||||||||||||||||||||||||||||  |||| |    
T  19878745 ctttggaagtagtgtaacatagtataaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttcaaac-a 19878647  T
Q  126 acttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    | |||||| ||||||||||||||||||||||||| |||| ||||    
T  19878646 attttttttgctaaaacgacactcattttgaaacagagggagta 19878603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 81 - 176
Target Start/End: Original strand, 54042298 - 54042393
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaatttta 176  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||  |||||| |||||||| ||||||||||| |||||||||||||| ||||||    
T  54042298 ttattattacattggaaaccgaaagtgacattcattttaaaacaatttttttttgctaaaacaacactcatttttaaacggaggaagtatatttta 54042393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 169
Target Start/End: Complemental strand, 19930810 - 19930668
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaaa 126  Q
    ||||||||||||||| ||||||||||||||||||||||||||           ||||||||||||| ||||| ||||||||||||||||||  ||||||     
T  19930810 tttggaagtagtgtaacataatattaattgaagggtacaattgaaaagaaaaagttattattgcatcggaaattgaaagtgacattcattttgaaacaat 19930711  T
Q  127 cttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
     |||||| |||||||||||| ||||||| ||||| ||| ||||    
T  19930710 ttttttttgctaaaacgacattcattttaaaacgaaggtagta 19930668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 81 - 161
Target Start/End: Complemental strand, 30261301 - 30261221
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgg 161  Q
    |||||||||||||||||||||||||||||||||||||  ||||||  ||||||| ||||||||||||||||||||| ||||    
T  30261301 ttattattgcattggaaactgaaagtgacattcattttgaaacaattttttttgactaaaacgacactcattttgacacgg 30261221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 27 - 169
Target Start/End: Original strand, 44571925 - 44572070
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||| |||| |||||||||||||||||||||           ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  44571925 ctttggaagtagtgtaacatattattaattgaagggtacaattgaaaagaaaaagtttttattgcattggaaactgaaagcgacattcattttaaaacaa 44572024  T
Q  126 --acttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
        |||||| |||||||||||||||||||| ||||||||| ||||    
T  44572025 ttttttttttagctaaaacgacactcattttaaaacggagggagta 44572070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 28 - 176
Target Start/End: Original strand, 45043649 - 45043798
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnng-ttattattgcattggaaactgaaagtgacattcatttaaaaacaaa 126  Q
    ||||||||||||||| |||| |||||||||||||||||||||            |||||||||||||| |||||||||||||||||||||| |||||||     
T  45043649 tttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaaattattattgcattgaaaactgaaagtgacattcattttaaaacaat 45043748  T
Q  127 cttttttggctaaaacgacactcattttgaaacggaggaagtaaatttta 176  Q
     ||||||   |||||||||||||||||| ||||||| | |||| ||||||    
T  45043749 tttttttaaataaaacgacactcattttaaaacggatggagtatatttta 45043798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 158
Target Start/End: Complemental strand, 1819659 - 1819528
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnngtt-attattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||| |||||||||| |||| |||||||||||||||||||||           || |||||||||||||||||||||||||||||||||||  |||| |    
T  1819659 ctttgaaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaatttattattgcattggaaactgaaagtgacattcattttgaaac-a 1819561  T
Q  126 acttttttggctaaaacgacactcattttgaaa 158  Q
    | |||||| ||||||||||||||||||||||||    
T  1819560 attttttttgctaaaacgacactcattttgaaa 1819528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 162
Target Start/End: Original strand, 40345407 - 40345542
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnng-ttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||| |||| |||||||||||||||||||||            |||||||||||||||||||||||||||||||||||||  |||| |    
T  40345407 ctttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcattttgaaac-a 40345505  T
Q  126 acttttttggctaaaacgacactcattttgaaacgga 162  Q
    | ||||||| ||||||||||| ||| |||||||||||    
T  40345506 atttttttgactaaaacgacattcaatttgaaacgga 40345542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 52915656 - 52915738
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||  ||||||||||||| |||||||||||||||| ||||    
T  52915656 gttattattgcattggaaactgaaagcgacattcattttgaaacaattttttttggctaaagcgacactcattttgaatcgga 52915738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 27 - 169
Target Start/End: Complemental strand, 49089560 - 49089415
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnngttattattgcattggaaactgaaagtgacattcatttaaaaacaa- 125  Q
    |||||||||||||||| |||| || ||||||||||||| ||||          ||||||||||||||| ||||| ||||||||||||||||  ||||||     
T  49089560 ctttggaagtagtgtaacatagtactaattgaagggtataattggaaaaaaaagttattattgcattgaaaactaaaagtgacattcattttgaaacaat 49089461  T
Q  126 --acttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
        |||||| |||||||||||||||||||||||||||||| ||||    
T  49089460 tttttttttttgctaaaacgacactcattttgaaacggagggagta 49089415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 33 - 162
Target Start/End: Complemental strand, 24940970 - 24940840
Alignment:
Q  33 aagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaaactttt 131  Q
    |||||||||| |||| |||||||||||||||||||||           |||||||||||||||||||  |||| ||||||||||||  ||||||||||||    
T  24940970 aagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaatcgaaaatgacattcattttgaaacaaactttt 24940871  T
Q  132 ttggctaaaacgacactcattttgaaacgga 162  Q
    |||| |||| | |||||||||||||||||||    
T  24940870 ttggataaaccaacactcattttgaaacgga 24940840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 25231218 - 25231144
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcatttt 154  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||  |||||| |||||| |||||||||||||    
T  25231218 gttattattgcattggaaattgaaagtgacattcattttaaaacaatttttttttgctaaagcgacactcatttt 25231144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 37624599 - 37624511
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||||||||||||||||| ||||  |||| || |||||| |||||| || |||||||||||||||||||| ||||    
T  37624599 gttattattgcattggaaactgaaagtgacatttattttgaaac-aattttttttgctaaagcgtcactcattttgaaacggagggagta 37624511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 169
Target Start/End: Complemental strand, 37654506 - 37654365
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||| |||| |||||||||||||||||||||           |||||||||| |||||||||||||  |||||||||||| |||||||    
T  37654506 ctttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgtattggaaactgaat-tgacattcattttaaaacaa 37654408  T
Q  126 acttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
      | ||||| ||||||||||||||||||||||| ||||| ||||    
T  37654407 t-tattttgactaaaacgacactcattttgaaaaggagggagta 37654365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 47817781 - 47817690
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaactttttt--ggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||| ||||||||||| | ||||||||  ||||||  ||||||  ||||||||||||||||||||||||||||||| ||||    
T  47817781 gttattattgcattgcaaactgaaagttaaattcattttgaaacaattttttttttggctaaaacgacactcattttgaaacggagggagta 47817690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 31 - 164
Target Start/End: Original strand, 49080541 - 49080674
Alignment:
Q  31 ggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaaactt 129  Q
    |||||||||||| ||||||||||||||||||||||||||           ||||||||||||||  ||||||||||||||||||||||  ||||||  ||    
T  49080541 ggaagtagtgtaacataatattaattgaagggtacaattgaaaataaaaagttattattgcatta-aaactgaaagtgacattcattttgaaacaatttt 49080639  T
Q  130 ttttggctaaaacgacactcattttgaaacggagg 164  Q
    |||| || ||||| ||||||||||||||| |||||    
T  49080640 tttttgcaaaaacaacactcattttgaaatggagg 49080674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 50203117 - 50203039
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||||||||||  ||||||||||||||||||| |||||||  |||||| |||||||||||||||||||| |||||||    
T  50203117 gttattattgcattgga--ctgaaagtgacattcattttaaaacaa--tttttttgctaaaacgacactcattttaaaacgga 50203039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 81 - 160
Target Start/End: Original strand, 51733609 - 51733689
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaa-acttttttggctaaaacgacactcattttgaaacg 160  Q
    ||||||||||||| |||||||||||||||||||||||  ||||||   |||||| ||||||||||||||||||||||||||    
T  51733609 ttattattgcattagaaactgaaagtgacattcattttgaaacaattttttttttgctaaaacgacactcattttgaaacg 51733689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 162
Target Start/End: Original strand, 41920369 - 41920505
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||| | ||||||||||||||||||||| ||||           ||||||||||| ||||||||||||| ||||||| |||| |||||||    
T  41920369 ctttggaagtagtggaacataatattaattgaagggtataattgaaaagaaaaagttattattgctttggaaactgaaaatgacatttattttaaaacaa 41920468  T
Q  126 acttttttggctaaaacgacactcattttgaaacgga 162  Q
      ||||||  ||||||| ||||||||||| |||||||    
T  41920469 ttttttttaactaaaacaacactcattttaaaacgga 41920505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 28734695 - 28734557
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnngtt-attattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||| |||||||||| |||| |||||||||||||||||||||           || ||||||||| ||||||||||||||||||||||||   ||||||    
T  28734695 ctttgcaagtagtgtaacatagtattaattgaagggtacaattgaatttttttttttattattgcaatggaaactgaaagtgacattcattatgaaacaa 28734596  T
Q  126 -acttttttggctaaaacgacactcattttgaaacggag 163  Q
       |||||| ||||||||||||||| |||||||||||||    
T  28734595 ttttttttttgctaaaacgacactcgttttgaaacggag 28734557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 81 - 160
Target Start/End: Complemental strand, 33033120 - 33033043
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacg 160  Q
    |||||||||||||||||||| |||||||||||||||| |||||||  |||||| | ||||||||| |||||||| |||||    
T  33033120 ttattattgcattggaaactaaaagtgacattcattttaaaacaa--tttttttgttaaaacgacgctcattttaaaacg 33033043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 34124313 - 34124246
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||| ||||||||||| |||||||| ||||||| ||||||||||||||||||| ||| ||||||||||    
T  34124313 aaagcgacattcattttaaaacaaatttttttgactaaaacgacactcattttaaaatggaggaagta 34124246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 34316319 - 34316182
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnng-ttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||| |  |||||||||||||||||||||||||            |||||||||||||||||||||||||||||||| |||| |||| ||    
T  34316319 ctttggaagtagtgcaatataatattaattgaagggtacaattgaaaataaaaaattattattgcattggaaactgaaagtgacatttattttaaaataa 34316220  T
Q  126 acttttttggctaaaacgacactcattttgaaacggag 163  Q
      || |||   |||||||||||||||||| ||||||||    
T  34316219 ttttgtttaattaaaacgacactcattttaaaacggag 34316182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 170
Target Start/End: Original strand, 2728512 - 2728602
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||||||||||||||||||||| ||||||||||||  ||      |||||| ||||||||||||||||||||||||| |||| |||||    
T  2728512 gttattattgcattggaaactgaaaatgacattcattttgaatttttttttttttgctaaaacgacactcattttgaaacagagggagtaa 2728602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 31817293 - 31817375
Alignment:
Q  87 ttgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||   ||||||||||||||||  ||||||| ||||||||||||   |||||||||||||||||||||| ||||    
T  31817293 ttgcattggaaatgtaaagtgacattcattttgaaacaaatttttttggctaatgtgacactcattttgaaacggagggagta 31817375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 10573268 - 10573344
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttg--gctaaaacgacactcatttt 154  Q
    ||||||||||||||||||||| ||| ||||||||||||  ||||||  |||||||  ||||||||||||||||||||    
T  10573268 gttattattgcattggaaactaaaaatgacattcattttgaaacaattttttttggtgctaaaacgacactcatttt 10573344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 160
Target Start/End: Complemental strand, 27653770 - 27653639
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnngttattattgcattggaaactgaaagtgacattcatttaaaaacaaac 127  Q
    ||||||||||||||| |||| |||||||||||||||||||||          ||||| |||||||| |||||| ||| ||||||| |||| |||||||      
T  27653770 tttggaagtagtgtaacatagtattaattgaagggtacaatt-gaaaaaaaagttatcattgcattagaaactaaaaatgacatttattttaaaacaatt 27653672  T
Q  128 ttttttggctaaaacgacactcattttgaaacg 160  Q
    | |||| | |||||||||||||||||| |||||    
T  27653671 tattttagttaaaacgacactcattttaaaacg 27653639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 80 - 173
Target Start/End: Complemental strand, 44061051 - 44060958
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaatt 173  Q
    |||||||||| ||| |||| |||||||||||||||||  |||||||| |||| | | |||||||||||||||||| |||| ||| || ||||||    
T  44061051 gttattattgtattagaaaatgaaagtgacattcattataaaacaaatttttatagttaaaacgacactcattttaaaactgagaaattaaatt 44060958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 2493144 - 2493076
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactc 149  Q
    |||||||||||||||||| |||||||||| |||||||  ||||||  ||||||||||||||||| ||||    
T  2493144 ttattattgcattggaaaatgaaagtgactttcattttgaaacaattttttttggctaaaacgaaactc 2493076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 19451325 - 19451416
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttt--tttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||  |||  | |  |||||| |||||||||||| ||||||||| ||||    
T  19451325 gttattattgcattggaaactgaaagtgacattcattttgaaacaattttttctctcactaaaatgacactcattttaaaacggagggagta 19451416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 21045174 - 21045108
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||  ||||||| |||||||||| ||  |||||||||||||||||||||||||||    
T  21045174 aaagtgacattcattttgaaacaaatttttttggctcaat-gacactcattttgaaacggaggaagta 21045108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 31917997 - 31917911
Alignment:
Q  82 tattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||||| |||||||||| |||||||| ||||| || ||||||  ||||||||||||| ||||| |||| || ||||||    
T  31917997 tattattgcattggaagctgaaagtgaaattcattttaaaac-aatttttttatctaaaacgacacttattttaaaacagatgaagta 31917911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 175
Target Start/End: Original strand, 34124497 - 34124540
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagtaaatttt 175  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  34124497 ttggctaaagcgacactcattttgaaacggaggaagtaaatttt 34124540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 38991875 - 38991959
Alignment:
Q  80 gttattattgcattggaaac---tgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||||||||   ||||| |||||||| ||| |||||||  ||||||||||| ||||||| |||||||||||||||    
T  38991875 gttattattgcattggaaaccgatgaaattgacattcgttttaaaacaat-ttttttggctataacgacaatcattttgaaacgga 38991959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 56555832 - 56555901
Alignment:
Q  96 aaactgaaagtgacattcatttaaaaacaaacttttttg--gctaaaacgacactcattttgaaacggag 163  Q
    |||||||||||||||||||||| |||||||  ||||||   |||||| ||||||||||||||||||||||    
T  56555832 aaactgaaagtgacattcattttaaaacaatttttttttttgctaaagcgacactcattttgaaacggag 56555901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 39982146 - 39982109
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcattt 117  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39982146 gttattattgcattggaaactgaaagtgacattcattt 39982109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 170
Target Start/End: Complemental strand, 40837173 - 40837079
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttt----tggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||||||||||||||| ||||||||||||||||||  ||||||  |||||    | |||||||||||||| ||||| ||| ||||| |||||    
T  40837173 gttattattgcattggaaaatgaaagtgacattcattttgaaacaattttttttttgttgctaaaacgacacttattttaaaatggagggagtaa 40837079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 50072299 - 50072238
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggag 163  Q
    ||||||||||||||||  ||||||  |||||||||||||  |||||||||||||||||||||    
T  50072299 aaagtgacattcattttgaaacaattttttttggctaaagtgacactcattttgaaacggag 50072238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 52732617 - 52732552
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaag 167  Q
    |||||||||||||||| |||||||  ||||||  |||||  |||||||||||||||||||||||||    
T  52732617 aaagtgacattcattttaaaacaattttttttaactaaagtgacactcattttgaaacggaggaag 52732552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 80 - 148
Target Start/End: Original strand, 27943660 - 27943727
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacact 148  Q
    ||||||||||||||| ||| ||||||||||||||||||  |||| || |||||| ||||||||||||||    
T  27943660 gttattattgcattgaaaattgaaagtgacattcattttgaaac-aattttttttgctaaaacgacact 27943727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 80 - 164
Target Start/End: Complemental strand, 29370646 - 29370563
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggagg 164  Q
    |||||||||  |||| ||||||||||||||||| |||| |||| |   |||||||||||||||||||| ||||||||||| ||||    
T  29370646 gttattattatattgaaaactgaaagtgacatttattttaaaatatt-ttttttggctaaaacgacacccattttgaaacagagg 29370563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 29519639 - 29519718
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacg 160  Q
    ||||||||||||||||||||| ||||||||||| ||||  |||| || |||||| | |||||| ||||||||||| |||||    
T  29519639 gttattattgcattggaaactaaaagtgacatttattttgaaac-aatttttttagataaaacaacactcattttaaaacg 29519718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 29840093 - 29840026
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||  ||||||  |||||||||||||  |||| ||||||||||||||||| ||||    
T  29840093 aaagtgacattcattttgaaacaattttttttggctaaagtgacagtcattttgaaacggagggagta 29840026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 30105932 - 30105877
Alignment:
Q  109 cattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggagg 164  Q
    |||||||||  ||||||  |||||| ||||||||||||||||||||||||||||||    
T  30105932 cattcattttgaaacaatttttttttgctaaaacgacactcattttgaaacggagg 30105877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 41496248 - 41496169
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaac 159  Q
    |||||||||| |||| ||||||||||||| ||| ||||  ||||||  ||| || ||||||| |||||||||||||||||    
T  41496248 gttattattgtattgaaaactgaaagtgagatttattttgaaacaatttttgttagctaaaatgacactcattttgaaac 41496169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 170
Target Start/End: Original strand, 36805583 - 36805645
Alignment:
Q  108 acattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    |||| ||||| |||||||  |||||| |||||| ||||||||||||||||||||| |||||||    
T  36805583 acatacattttaaaacaatattttttagctaaagcgacactcattttgaaacggatgaagtaa 36805645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 6462027 - 6461954
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaatttt 175  Q
    |||| |||||||||||  ||||||  |||||| |||||||||| ||||||||| ||||||| | ||||||||||    
T  6462027 aaagcgacattcattttgaaacaatttttttttgctaaaacgatactcatttttaaacggatggagtaaatttt 6461954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 20448136 - 20448045
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnng-ttattattgcattggaaactgaaagtgacattcattt 117  Q
    |||||||||||||||| |||| |||||||||||||||| ||||            |||||||||||||| ||||||||||||||||||||||    
T  20448136 ctttggaagtagtgtaacatagtattaattgaagggtataattgaaaagaaaaaattattattgcattgaaaactgaaagtgacattcattt 20448045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 21864497 - 21864534
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcattt 117  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  21864497 gttattattgcattggaaactgaaagtaacattcattt 21864534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 21920358 - 21920395
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcattt 117  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  21920358 gttattattgcattggaaactgaaagtaacattcattt 21920395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 22220473 - 22220562
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||| ||| ||||| ||||||| ||||  ||||||  |||||| ||||||  |||||||||||  ||||||||| ||||    
T  22220473 gttattattgcattgaaaattgaaaatgacatttattttgaaacaatttttttttgctaaagtgacactcatttcaaaacggagggagta 22220562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 37654614 - 37654651
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  37654614 ttggctaaaacgacactcattttgaaacggagggagta 37654651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 84 - 125
Target Start/End: Original strand, 40010992 - 40011033
Alignment:
Q  84 ttattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||||||||||||||||||||| |||||||||| |||||||    
T  40010992 ttattgcattggaaactgaaagtaacattcattttaaaacaa 40011033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 46392176 - 46392256
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||| ||| ||| |||||||||||  ||||| |||| ||  |||||| |||||||||||||||||||| |||||||    
T  46392176 ttattattgctttgaaaagtgaaagtgacagccattttaaaataat-ttttttagctaaaacgacactcattttaaaacgga 46392256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 28116263 - 28116203
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||| ||||  ||| ||  ||||||||||||| |||||||||||||||||||||    
T  28116263 aaagtgacatttattttgaaataattttttttggctaaagcgacactcattttgaaacgga 28116203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 44855260 - 44855200
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||| ||||  ||||||  |||||| ||||||| ||||||||||||||||||||    
T  44855260 aaagtgacatttatttcgaaacaatttttttttgctaaaatgacactcattttgaaacgga 44855200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 45520591 - 45520651
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||||||||| |||| ||| | |||||| ||||| |||||||||||| |||||||    
T  45520591 aaagtgacattcattttaaaataaattattttggttaaaatgacactcattttaaaacgga 45520651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 124
Target Start/End: Complemental strand, 45839680 - 45839636
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaaca 124  Q
    |||||||||| ||| ||||||||||||||||||||||| ||||||    
T  45839680 gttattattgtattagaaactgaaagtgacattcatttcaaaaca 45839636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 163
Target Start/End: Original strand, 7906110 - 7906193
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggag 163  Q
    ||||||||||||  ||||||||||||||||||||||||  |||  |  || ||| |||||| ||||||||||||| ||| ||||    
T  7906110 gttattattgcaccggaaactgaaagtgacattcattttgaaatgattttattttgctaaagcgacactcattttaaaatggag 7906193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 81 - 159
Target Start/End: Complemental strand, 24157227 - 24157151
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaac 159  Q
    ||||||||||||| |||||| ||| ||||||| ||||  ||||||  |||||| ||||||||||| |||||||| ||||    
T  24157227 ttattattgcattagaaactaaaattgacatttattttgaaacaa--tttttttgctaaaacgacgctcattttaaaac 24157151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 172
Target Start/End: Original strand, 30780257 - 30780329
Alignment:
Q  98 actgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaat 172  Q
    ||||||| ||||||| |||| |||||| |  ||||| | |||||||||||||||||| ||||||||| |||||||    
T  30780257 actgaaaatgacatttattttaaaacata--tttttcgttaaaacgacactcattttaaaacggagggagtaaat 30780329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 3093371 - 3093313
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacg 160  Q
    |||||||||||||||| |||| ||||||||||  |||||  |||||||||||| |||||    
T  3093371 aaagtgacattcattttaaaataaactttttttactaaagtgacactcattttaaaacg 3093313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 155
Target Start/End: Original strand, 6991376 - 6991450
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttg 155  Q
    ||||||||| |||| |||||||||||||||||||||| |||| ||  ||||||  |||||| ||| || ||||||    
T  6991376 ttattattgtattgaaaactgaaagtgacattcattttaaaataattttttttaactaaaatgacgctaattttg 6991450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 8971084 - 8970994
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaa-acttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    |||||||| ||||| ||||||||||||||  |||||| |||||||   |||||| | |||||| ||||||||||| ||| ||||| |||||    
T  8971084 ttattatttcattgaaaactgaaagtgacggtcattttaaaacaattttttttttgttaaaacaacactcattttaaaatggagggagtaa 8970994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 25231372 - 25231414
Alignment:
Q  136 ctaaaacgacactcattttgaaacggaggaagtaaattttagc 178  Q
    |||||||||||||||| ||||||||||||||||| || |||||    
T  25231372 ctaaaacgacactcatattgaaacggaggaagtacatgttagc 25231414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 170
Target Start/End: Original strand, 32141123 - 32141165
Alignment:
Q  128 ttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    |||||| | |||||||||||||||||||||||||||| |||||    
T  32141123 tttttttgttaaaacgacactcattttgaaacggagggagtaa 32141165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 42605669 - 42605627
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaatt 69  Q
    ||||| ||||| |||| ||||||||||||||||||||||||||    
T  42605669 ctttgaaagtaatgtaacataatattaattgaagggtacaatt 42605627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 162
Target Start/End: Original strand, 45889765 - 45889795
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||||||||||||||||||||||||    
T  45889765 ttggctaaaacgacactcattttgaaacgga 45889795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 51930618 - 51930556
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggagg 164  Q
    |||| |||||||||||  ||||||| ||||||  |||||  ||||||||||||||||||||||    
T  51930618 aaagcgacattcattttgaaacaaatttttttaactaaagtgacactcattttgaaacggagg 51930556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 166
Target Start/End: Complemental strand, 52915502 - 52915472
Alignment:
Q  136 ctaaaacgacactcattttgaaacggaggaa 166  Q
    |||||||||||||||||||||||||||||||    
T  52915502 ctaaaacgacactcattttgaaacggaggaa 52915472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 53814557 - 53814599
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaatt 69  Q
    ||||| |||||||||| |||| |||||||||||||||||||||    
T  53814557 ctttgaaagtagtgtaacatagtattaattgaagggtacaatt 53814599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 11364269 - 11364188
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgg 161  Q
    ||||||||| ||||  |||| ||||||  ||||||| | |||||||   ||||| | |||||||||||||||||||||||||    
T  11364269 gttattatttcattaaaaaccgaaagtatcattcatcttaaaacaattctttttagttaaaacgacactcattttgaaacgg 11364188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 18430193 - 18430230
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  18430193 ttggctaaagcaacactcattttgaaacggaggaagta 18430230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 22220319 - 22220286
Alignment:
Q  136 ctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||||||||||| ||||||    
T  22220319 ctaaaacgacactcattttgaaacggatgaagta 22220286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 29519478 - 29519441
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  29519478 ttggctaaaacgacactcattttaaaacggatgaagta 29519441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 29840255 - 29840292
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  29840255 ttgggtaaaacgacactcattttgaaacggagggagta 29840292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 30492920 - 30492957
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  30492920 ttggctaaaaccacactcattttgaaacggagggagta 30492957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 31941757 - 31941794
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  31941757 ttggctaaagcgacactcattttgaaacggagggagta 31941794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 38991712 - 38991679
Alignment:
Q  136 ctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||| ||||||||||||||    
T  38991712 ctaaaacgacactcattttaaaacggaggaagta 38991679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 39009427 - 39009386
Alignment:
Q  128 ttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||| |||||||||| |||||| ||||    
T  39009427 ttttttggctaaaacgacaatcattttgaatcggagggagta 39009386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 39985021 - 39985058
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  39985021 ttggctaaagcgacactcattttgaaacggagggagta 39985058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 47321347 - 47321384
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  47321347 ttggctaaaacgacactcattttaaaacggagggagta 47321384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 50621355 - 50621388
Alignment:
Q  136 ctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||| ||||||||||||||    
T  50621355 ctaaaacgacactcattttaaaacggaggaagta 50621388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 51434391 - 51434452
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggag 163  Q
    |||| ||||||||||| |||||||  |||||| | |||| ||||||||||||| ||||||||    
T  51434391 aaagcgacattcattttaaaacaatttttttttgttaaagcgacactcattttaaaacggag 51434452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 56373635 - 56373679
Alignment:
Q  27 ctttggaagtagtgtagcata--atattaattgaagggtacaatt 69  Q
    |||||||||||||||| ||||  ||||||||||||||||||||||    
T  56373635 ctttggaagtagtgtaacatataatattaattgaagggtacaatt 56373679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 2493197 - 2493157
Alignment:
Q  29 ttggaagtagtgtagcataatattaattgaagggtacaatt 69  Q
    ||||||||| |||| |||| |||||||||||||||||||||    
T  2493197 ttggaagtaatgtaacatagtattaattgaagggtacaatt 2493157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 169
Target Start/End: Original strand, 17499835 - 17499919
Alignment:
Q  86 attgcattggaaactgaaagtgacattcatttaaaaacaaacttttttg-gctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||   |||| |||||||||||  ||||||  ||||||  |||||| ||||||||||||| ||||||||| ||||    
T  17499835 attgcattggaaatgtaaagcgacattcattttgaaacaattttttttttgctaaatcgacactcattttaaaacggagggagta 17499919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 18430080 - 18430044
Alignment:
Q  33 aagtagtgtagcataatattaattgaagggtacaatt 69  Q
    |||||||||| |||| |||||||||||||||||||||    
T  18430080 aagtagtgtaacatagtattaattgaagggtacaatt 18430044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 24941084 - 24941116
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggagg 164  Q
    |||| ||||||||||||||||||||||||||||    
T  24941084 ttggttaaaacgacactcattttgaaacggagg 24941116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 54234018 - 54234050
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggagg 164  Q
    ||||||||| |||||||||||||||||||||||    
T  54234018 ttggctaaagcgacactcattttgaaacggagg 54234050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 124
Target Start/End: Complemental strand, 56460126 - 56460082
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaaca 124  Q
    |||| |||||||||| || ||||||||||||||||||| ||||||    
T  56460126 gttactattgcattgaaagctgaaagtgacattcattttaaaaca 56460082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 1e-35; HSPs: 86)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 27 - 183
Target Start/End: Original strand, 27947555 - 27947713
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||| |||||||||||||||||||||| || ||||    
T  27947555 ctttggaagtagtgtagcataatattaattgaagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttaagacaa 27947654  T
Q  126 acttttttg-gctaaaacgacactcattttgaaacggaggaagtaaattttagccctag 183  Q
      ||||||  |||||||||||||||||||||||||||||| ||||| ||||| ||||||    
T  27947655 ttttttttttgctaaaacgacactcattttgaaacggagggagtaagttttaaccctag 27947713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 272 - 354
Target Start/End: Original strand, 27947866 - 27947949
Alignment:
Q  272 ttttaactaagtgttaaa-gagtttgagatccagttcaaattggggagaaagagaaaaatatttatctaacaactaattgtcaa 354  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27947866 ttttaactaagtgttaaaagagtttgagatccagttcaaattggggagaaagagaaaaatatttatctaacaactaattgtcaa 27947949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 27 - 169
Target Start/End: Complemental strand, 1742088 - 1741946
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnng-ttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||| |||||||||| |||| |||||||||||||||||||||          | |||||||||||||||||||||||||||||||||||||  |||| |    
T  1742088 ctttgaaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaggttattattgcattggaaactgaaagtgacattcattttgaaac-a 1741990  T
Q  126 acttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||    
T  1741989 actttttgggctaaaacgacactcattttgaaacggagggagta 1741946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 27 - 169
Target Start/End: Complemental strand, 40339555 - 40339413
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnngttattattgcattggaaactgaaagtgacattcatttaaaaacaaa 126  Q
    ||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||| ||| ||||||||||| ||||||  ||||||     
T  40339555 ctttggaagtagtgtataataatattaattgaagggtacaattgaaaaataaagttattattgcattgaaaattgaaagtgacagtcattttgaaacaat 40339456  T
Q  127 cttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
      |||||||||||||||||||||||||| ||||||||| ||||    
T  40339455 tctttttggctaaaacgacactcattttaaaacggagggagta 40339413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 715972 - 716056
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaa 166  Q
    |||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  715972 ttattattgcattggaaactgaaagtgacattcattttgaaacaaa-ttttttggctaaagcgacactcattttaaaacggaggaa 716056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 82 - 165
Target Start/End: Complemental strand, 2297079 - 2296996
Alignment:
Q  82 tattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggagga 165  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||  ||||||||||||| ||||||||||||||||||||||||    
T  2297079 tattattgcattgaaaactgaaagtgacattcattttgaaacaattttttttggctaaagcgacactcattttgaaacggagga 2296996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 34274837 - 34274758
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaac 159  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||| || |||||||||| ||||||||||||||||||    
T  34274837 gttattattgcattggaaactgaaagtgacattcattttgaaacaaatttgtttggctaaagcgacactcattttgaaac 34274758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 27 - 154
Target Start/End: Complemental strand, 44453232 - 44453104
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||| ||||||||||| |||| |||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||||||| ||    
T  44453232 ctttagaagtagtgtaacatagtattaattgaagggtacaattgaaaaaagaaagttattattgcattggaaactgaaagtgacattcatttaaaaataa 44453133  T
Q  126 acttttttggctaaaacgacactcatttt 154  Q
      |||||||  ||||||||||||||||||    
T  44453132 tattttttgattaaaacgacactcatttt 44453104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 176
Target Start/End: Original strand, 45948685 - 45948835
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa- 125  Q
    |||||||||| |||| |||| |||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||  ||||||     
T  45948685 tttggaagtaatgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaat 45948784  T
Q  126 acttttttggctaaaacgacactcattttgaaacggaggaagtaaatttta 176  Q
      |||||| |||||||||||||||||||| ||||||| | |||| ||||||    
T  45948785 tttttttttgctaaaacgacactcattttaaaacggaaggagtatatttta 45948835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 22298039 - 22297959
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||  |||||| |||||||||||||||||||| |||||||    
T  22298039 gttattattgcattggaaactgaaagtgacattcattttgaaacaa--tttttttgctaaaacgacactcattttaaaacgga 22297959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 249 - 319
Target Start/End: Original strand, 27947794 - 27947865
Alignment:
Q  249 ggagtctttggtagctcaattagttttaactaagtgtt-aaagagtttgagatccagttcaaattggggaga 319  Q
    |||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27947794 ggaggctttggtagctcaattaattttaactaagtgttaaaagagtttgagatccagttcaaattggggaga 27947865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 18292378 - 18292288
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaactttttt-ggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||| ||||||||||||||||||  ||||||  |||||| ||||||| ||||||||||||||||||||||| ||||    
T  18292378 gttattattgcattggaaattgaaagtgacattcattttgaaacaatttttttttggctaaagcgacactcattttgaaacggagggagta 18292288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 12977794 - 12977883
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||| ||||||||||||||||||  ||||||  ||||||||||||| ||||||||||||| ||| ||||| ||||    
T  12977794 gttattattgcattggaaattgaaagtgacattcattttgaaacaattttttttggctaaagcgacactcattttaaaaaggagggagta 12977883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 80 - 163
Target Start/End: Complemental strand, 8604018 - 8603934
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaa-acttttttggctaaaacgacactcattttgaaacggag 163  Q
    ||||||||||||||||||| |||||||||| ||||||| ||||||| | |||| |||||||||||||||||||||| ||||||||    
T  8604018 gttattattgcattggaaattgaaagtgacgttcattttaaaacaatatttttatggctaaaacgacactcattttaaaacggag 8603934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 80 - 163
Target Start/End: Complemental strand, 34012204 - 34012123
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggag 163  Q
    ||||||| | ||||||||||| |||||||||||||||| |||||||  ||||||||||||||||||||||||||| ||||||||    
T  34012204 gttattagtacattggaaacttaaagtgacattcattttaaaacaa--ttttttggctaaaacgacactcattttaaaacggag 34012123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 44567150 - 44567238
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||| ||| |||||||||||||||||| |||||||| ||||||| ||||| |||||| |||||| ||||||||| ||||    
T  44567150 ttattattgcattgaaaattgaaagtgacattcattttaaaacaaatttttttgactaaagcgacacccattttaaaacggagggagta 44567238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 19105109 - 19105199
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaa-acttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||   |||||| |||||||||||||||||||||||| ||||| ||||    
T  19105109 gttattattgcattaaaaactgaaagtgacattcattttaaaacaattttttttttgctaaaacgacactcattttgaaatggagggagta 19105199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 169
Target Start/End: Complemental strand, 6747322 - 6747180
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnngttattattgcattggaaactgaaagtgacattcatttaaaaacaa- 125  Q
    ||||||||||||||| ||| | ||||||||| |||||||||||          |||||||||||||||||||||||||||||||||| |||  ||||||     
T  6747322 ctttggaagtagtgt-gcagagtattaattggagggtacaattaaaaagaaaagttattattgcattggaaactgaaagtgacattcgtttttaaacaat 6747224  T
Q  126 acttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
      ||||||  ||||| ||||||||||||||||||||||| ||||    
T  6747223 tttttttttactaaagcgacactcattttgaaacggagggagta 6747180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 37490826 - 37490745
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||||||| ||||||||||||||||||||||  | ||||  ||||||||| ||||| |||||||||||||||||||    
T  37490826 ttattattgcattgaaaactgaaagtgacattcattttgatacaattttttttggcaaaaacaacactcattttgaaacgga 37490745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 249 - 349
Target Start/End: Original strand, 27999346 - 27999443
Alignment:
Q  249 ggagtctttggtagctcaattagttttaactaagtgttaaag-agtttgagatccagttcaaattggggagaaagagaaaaatatttatctaacaactaa 347  Q
    |||| ||||||||||||||||||||||||    ||||||||| |||||||||||| ||||||||   |||||||||||||||||||||||||| | ||||    
T  27999346 ggaggctttggtagctcaattagttttaa----gtgttaaaggagtttgagatccggttcaaatctcggagaaagagaaaaatatttatctaagagctaa 27999441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 81 - 161
Target Start/End: Original strand, 45499936 - 45500016
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgg 161  Q
    ||||||| |||||||||||||||||||| ||||||||  ||||||    ||||||||||||||||||||||||||||||||    
T  45499936 ttattatggcattggaaactgaaagtgaaattcattttgaaacaactacttttggctaaaacgacactcattttgaaacgg 45500016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 164
Target Start/End: Original strand, 8334381 - 8334464
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggagg 164  Q
    ||||||||| |||||||| ||||||||||||| ||||  ||||||  || ||||||| ||||||||||||||||||||||||||    
T  8334381 ttattattggattggaaaatgaaagtgacattgattttgaaacaattttgtttggcttaaacgacactcattttgaaacggagg 8334464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 162
Target Start/End: Original strand, 13405181 - 13405318
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||| |||||||||| |||| |||||||||||||||||||||           ||||||||| |||||||||||||||||||||||||||| |||||||    
T  13405181 ctttgaaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattacattggaaactgaaagtgacattcattttaaaacaa 13405280  T
Q  126 -acttttttggctaaaacgacactcattttgaaacgga 162  Q
       ||||||  |||||||||||||| |||| |||||||    
T  13405281 tttttttttaactaaaacgacactcgttttaaaacgga 13405318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 162
Target Start/End: Original strand, 31418567 - 31418706
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||| |||| |||||||||||||||||||||           ||||||||||||||||||||||||||||  ||| ||||  ||||||    
T  31418567 ctttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtggaatttattttgaaacaa 31418666  T
Q  126 a---cttttttggctaaaacgacactcattttgaaacgga 162  Q
    |    ||||||||||||||| ||||| |||||||||||||    
T  31418667 attttttttttggctaaaacaacactaattttgaaacgga 31418706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 32501857 - 32501946
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||| ||||||||||||| ||| |||| |||||||  |||||| | |||||||||||||||||| ||| ||||| ||||    
T  32501857 gttattattgcattgaaaactgaaagtgatatttattttaaaacaatttttttttgttaaaacgacactcattttaaaatggagggagta 32501946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 42285950 - 42285877
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcatttt 154  Q
    |||||||||||||||||||||||| |||||||||||| |||||||   |||||| | |||||||||||||||||    
T  42285950 ttattattgcattggaaactgaaaatgacattcattttaaaacaattatttttgtcaaaaacgacactcatttt 42285877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 164
Target Start/End: Complemental strand, 41137825 - 41137688
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnng-ttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||| |||| ||| |||||||||||||||||            |||||||||||||||||||| |||||| ||||||||   ||||||    
T  41137825 ctttggaagtagtgtaacatagtatcaattgaagggtacaattgaaaagaaaaaattattattgcattggaaactaaaagtggcattcattgtgaaacaa 41137726  T
Q  126 acttttttggctaaaacgacactcattttgaaacggagg 164  Q
      |||||||| |||||||||||||||||| |||||||||    
T  41137725 ttttttttgg-taaaacgacactcattttaaaacggagg 41137688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 18270620 - 18270541
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaac 159  Q
    ||||||||||||||||||||||||||||||||||||||  || |||| ||||||| |||||  |||| ||||||| ||||    
T  18270620 gttattattgcattggaaactgaaagtgacattcattttgaaccaaatttttttgactaaagtgacattcattttaaaac 18270541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 81 - 168
Target Start/End: Original strand, 24780415 - 24780501
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagt 168  Q
    ||||||||||||| |||||||||||||||||||||||  |||| || ||||||   |||||||||||||||||| ||| |||||||||    
T  24780415 ttattattgcattagaaactgaaagtgacattcattttgaaac-aattttttttattaaaacgacactcattttaaaatggaggaagt 24780501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 27935810 - 27935727
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaa-acttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||   ||||||  |||||||||||| |||||| |||||||    
T  27935810 gttattattgcattgaaaactgaaagtgacattcattttaaaacaatttttttttaactaaaacgacacccattttaaaacgga 27935727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 43813476 - 43813543
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||||| |||||||| ||| ||||||||| ||||||||||||| ||||||||| ||||    
T  43813476 aaagtgacattcattttaaaacaaattttgttggctaaagcgacactcattttaaaacggaggtagta 43813543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 4268652 - 4268570
Alignment:
Q  82 tattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggagg 164  Q
    ||||||| ||||||||| |||||| |||||||||||  ||||||  | ||||| ||||||||||||||||||| |||||||||    
T  4268652 tattattacattggaaattgaaagcgacattcattttgaaacaatttcttttgtctaaaacgacactcattttaaaacggagg 4268570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 162
Target Start/End: Complemental strand, 23935514 - 23935382
Alignment:
Q  31 ggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnngttattattgcattggaaactgaaagtgacattcatttaaaaacaa-actt 129  Q
    |||||||||||| |||| |||||||||||||||||| |           |||||||||||||||||||||||||  |||||| |||| |||||||   ||    
T  23935514 ggaagtagtgtaacatagtattaattgaagggtacattgaaaagaaaaagttattattgcattggaaactgaaaacgacatttattttaaaacaattttt 23935415  T
Q  130 ttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||  ||||||||||||||||||| |||||||    
T  23935414 tttttcctaaaacgacactcattttaaaacgga 23935382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 25440915 - 25440833
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaa-acttttttggctaaaacgacactcattttgaaacgg 161  Q
    ||||||||||||||||||||||||||||||||  |||| |||| ||   |||||| |||||| ||||||||||||||||||||    
T  25440915 gttattattgcattggaaactgaaagtgacatatattttaaaataattttttttttgctaaagcgacactcattttgaaacgg 25440833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 10599256 - 10599168
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||| ||||||||||||| ||||||||  |||| |  |||||| | |||||||||||||||||| ||||||||| ||||    
T  10599256 gttattattgcattgaaaactgaaagtgatattcattttgaaac-atttttttttgttaaaacgacactcattttaaaacggagggagta 10599168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 37815766 - 37815685
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||| |||||||| |||||| |||||||||||  ||||||  |||||||  |||||||||||||||||| |||||||    
T  37815766 ttattattgtattggaaattgaaagcgacattcattttgaaacaattttttttgattaaaacgacactcattttaaaacgga 37815685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 10476179 - 10476108
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcatttt 154  Q
    ||||||||||||||||||| |||||||||||||||||| |||| ||   ||||| | ||||||||||||||||||    
T  10476179 gttattattgcattggaaagtgaaagtgacattcattttaaaataa---tttttagttaaaacgacactcatttt 10476108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 81 - 169
Target Start/End: Complemental strand, 39557364 - 39557277
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||| ||||| ||||||||||||||||| |||| |||| ||  |||||| | |||||||||||||||||| ||||||| ||||||    
T  39557364 ttattattacattgaaaactgaaagtgacatttattttaaaataat-ttttttagttaaaacgacactcattttaaaacggatgaagta 39557277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 40298869 - 40298801
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||||||||||||  ||||||  |||||||||||||  |||||||||||||||||||||| |||||    
T  40298869 aaagtgacattcattttgaaacaattttttttggctaaagtgacactcattttgaaacggagggagtaa 40298801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 42879985 - 42880079
Alignment:
Q  24 attctttggaagtagtgtagcataatattaattgaagggtacaatt-nnnnnnnnnngttattattgcattggaaactgaaagtgacattcattt 117  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||           ||||||||| ||||| ||||||||||||||||||||||    
T  42879985 attctttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattacattgaaaactgaaagtgacattcattt 42880079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 48843594 - 48843542
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaactttttt 133  Q
    |||||||||||||| |||||||||||||||||||||| |||||||| ||||||    
T  48843594 ttattattgcattgaaaactgaaagtgacattcattttaaaacaaattttttt 48843542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 169
Target Start/End: Original strand, 44057718 - 44057797
Alignment:
Q  90 cattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||| ||| || |||||||||||||||  ||||||  ||||||  ||||||||||||||||||||||||||||| ||||    
T  44057718 cattgaaaagtgcaagtgacattcattttgaaacaatttttttttactaaaacgacactcattttgaaacggagggagta 44057797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 36912124 - 36912062
Alignment:
Q  107 gacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||  ||||||| |||||| |||||| ||||||||||||||||||||||| ||||    
T  36912124 gacattcattttgaaacaaattttttttgctaaagcgacactcattttgaaacggagggagta 36912062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 83 - 158
Target Start/End: Original strand, 45933695 - 45933772
Alignment:
Q  83 attattgcattggaaactgaaagtgacattcatttaaaaacaa--acttttttggctaaaacgacactcattttgaaa 158  Q
    |||||||||||| |||||||||||||||||||||| |||||||    ||||||  ||||||||||||| |||||||||    
T  45933695 attattgcattgaaaactgaaagtgacattcattttaaaacaatttttttttttactaaaacgacacttattttgaaa 45933772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 22597252 - 22597191
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggag 163  Q
    ||||||||||||||||  ||||||| | |||||||||||  |||||||||||||||||||||    
T  22597252 aaagtgacattcattttgaaacaaattcttttggctaaagtgacactcattttgaaacggag 22597191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 24680171 - 24680126
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||    
T  24680171 gttattattgcattggaaactgaaaatgacattcattttaaaacaa 24680126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 154
Target Start/End: Original strand, 29530989 - 29531121
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnng-ttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||| |||| ||||| ||||||||||||||||||||||||||            |||||||||||||| ||||||||| |||||||||||| |||||||    
T  29530989 ctttgaaagtggtgtaacataatattaattgaagggtacaattgaaaagaaaaaattattattgcattgaaaactgaaaatgacattcatttcaaaacaa 29531088  T
Q  126 ----acttttttggctaaaacgacactcatttt 154  Q
          |||||| ||||||||||||||||||||    
T  29531089 tttttttttttttgctaaaacgacactcatttt 29531121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 32345967 - 32346028
Alignment:
Q  102 aaagtgacattcatttaaaaacaaactttt-ttggctaaaacgacactcattttgaaacgga 162  Q
    |||| |||||||||||  ||||||| |||| |||||||||||||||||||||||||||||||    
T  32345967 aaagcgacattcattttgaaacaaattttttttggctaaaacgacactcattttgaaacgga 32346028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 40927206 - 40927169
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcattt 117  Q
    ||||||||||||||||||||||||||||||||||||||    
T  40927206 gttattattgcattggaaactgaaagtgacattcattt 40927169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 18733475 - 18733415
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||||  ||||||  ||||||||||||| ||||||||||||| |||||||    
T  18733475 aaagtgacattcattttgaaacaattttttttggctaaagcgacactcattttaaaacgga 18733415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 17869274 - 17869191
Alignment:
Q  87 ttgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||||||||   ||| ||||||||||||  ||||||| |||||| ||||||  |||||||||||| ||||||||| |||||    
T  17869274 ttgcattggaaatgtaaaatgacattcattttgaaacaaatttttttcgctaaagtgacactcattttaaaacggagggagtaa 17869191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 172
Target Start/End: Original strand, 31929969 - 31930060
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaat 172  Q
    |||||||||||||| ||||||||| | | |||||||| |||| ||  ||||||| ||||| ||||||| ||||| ||||||| | |||||||    
T  31929969 ttattattgcattgaaaactgaaaataatattcattttaaaataattttttttgtctaaagcgacacttattttaaaacggatggagtaaat 31930060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 36836081 - 36836018
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggagga 165  Q
    |||| |||||||||||  ||||||| | ||||| ||||| ||||||||||||||||||||||||    
T  36836081 aaagcgacattcattttgaaacaaattattttgactaaagcgacactcattttgaaacggagga 36836018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 21752219 - 21752296
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaa 158  Q
    ||||||||||||||||||||||||| ||||||| ||||   ||| || ||||||  ||||||||||||| |||||||||    
T  21752219 gttattattgcattggaaactgaaaatgacatttattt-tgaaccaattttttttactaaaacgacacttattttgaaa 21752296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 37502362 - 37502281
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||||||||||||||||||||||| |||||||   ||     | |||| ||||||||||||||||||||||||||||    
T  37502362 gttattattgcattggaaactgaaagtgacgttcattt-tgaattttttgttttagctaaaacgacactcattttgaaacgga 37502281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 40800008 - 40799938
Alignment:
Q  106 tgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaatttta 176  Q
    ||||||||||||  ||||||| | |||| ||||||  |||||||||||||||||||||| ||||| |||||    
T  40800008 tgacattcattttgaaacaaattatttttgctaaagtgacactcattttgaaacggagggagtaattttta 40799938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 18528587 - 18528671
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggagga 165  Q
    ||||||||||||   |||||||||||||| |||||||| |||| ||  |||| |||||||| ||||||||||||| ||||| ||||    
T  18528587 gttattattgcaaaagaaactgaaagtgaaattcattttaaaataatatttt-tggctaaagcgacactcattttaaaacgaagga 18528671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 33682571 - 33682498
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcatttt 154  Q
    |||||||||||||| ||  ||||||||||  || |||  |||||||  ||||||||||||||||||||||||||    
T  33682571 ttattattgcattgaaacttgaaagtgacggtctttttgaaacaaatatttttggctaaaacgacactcatttt 33682498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 40207513 - 40207578
Alignment:
Q  106 tgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaa 171  Q
    ||||||||||||  || |||  |||||||||||||  |||||||||||||||||||||| ||||||    
T  40207513 tgacattcattttgaagcaattttttttggctaaagtgacactcattttgaaacggagggagtaaa 40207578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 40299042 - 40299079
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  40299042 ttggctaaaacgacactcattttgaaacggagggagta 40299079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 48684766 - 48684729
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcattt 117  Q
    |||||||||||||||||||| |||||||||||||||||    
T  48684766 gttattattgcattggaaaccgaaagtgacattcattt 48684729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 24133239 - 24133283
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||||||||||||||||||||||||||| |||| || |||||||    
T  24133239 ttattattgcattggaaactgaaagtgacgttcagtttaaaacaa 24133283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 30514991 - 30514927
Alignment:
Q  106 tgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||||||||  ||||||  ||||||||||||||||| || | |||||||||||||| |||||    
T  30514991 tgacattcattttgaaacaattttttttggctaaaacgatacaccttttgaaacggagggagtaa 30514927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 28044263 - 28044329
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||||| |||||||  ||||||  |||||  ||||||||||||||||||| |||||||    
T  28044263 aaagtgacattcattttaaaacaatttttttta-ctaaagtgacactcattttgaaacggtggaagta 28044329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 131
Target Start/End: Complemental strand, 42753751 - 42753700
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaactttt 131  Q
    |||||||||| |||||||| ||||||||||||||||||  ||||||| ||||    
T  42753751 gttattattgtattggaaattgaaagtgacattcattttgaaacaaattttt 42753700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 158
Target Start/End: Complemental strand, 21819326 - 21819251
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaa 158  Q
    ||||||||| |||| ||||||||| | || |||||||  ||||||  |||||| | ||||||||||||||||||||||    
T  21819326 ttattattgtattgaaaactgaaaataactttcattttgaaacaa--ttttttagttaaaacgacactcattttgaaa 21819251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 29636335 - 29636413
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaa 158  Q
    |||||||||||||| |||||||||||||||||| ||||  | | |   |||||| ||||||| |||||||||| |||||    
T  29636335 gttattattgcattagaaactgaaagtgacatttattttgataaacttttttttagctaaaatgacactcattatgaaa 29636413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 30312500 - 30312416
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaa---acttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||| |||| |||| ||||||||||||||||| |||| ||     |||||||| ||||||||| |||||||| |||||||    
T  30312500 ttattattgtattgaaaaccgaaagtgacattcattttaaaaaaagttttttttttggttaaaacgaccctcattttaaaacgga 30312416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 1031198 - 1031161
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcattt 117  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  1031198 gttattattgcaatggaaactgaaggtgacattcattt 1031161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 1742195 - 1742232
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  1742195 ttggctaaagcgacactcattttgaaacggagggagta 1742232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 10684969 - 10685018
Alignment:
Q  109 cattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaa 158  Q
    |||||||||  ||||||| | ||||||||||| |||||||||||||||||    
T  10684969 cattcattttgaaacaaattattttggctaaagcgacactcattttgaaa 10685018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 16565214 - 16565286
Alignment:
Q  86 attgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaac 159  Q
    |||||||| |||||||||| ||||||||||||  |||| || |||||| | |||||||||||| ||||| ||||    
T  16565214 attgcattagaaactgaaaatgacattcattttgaaac-aatttttttagttaaaacgacacttattttaaaac 16565286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 16600448 - 16600376
Alignment:
Q  86 attgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaac 159  Q
    |||||||| |||||||||| ||||||||||||  |||| || |||||| | |||||||||||| ||||| ||||    
T  16600448 attgcattagaaactgaaaatgacattcattttgaaac-aatttttttagttaaaacgacacttattttaaaac 16600376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 18270775 - 18270808
Alignment:
Q  136 ctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||||||||||| ||||||    
T  18270775 ctaaaacgacactcattttgaaacggatgaagta 18270808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 19906409 - 19906368
Alignment:
Q  128 ttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||| | ||||||||||||||||||||| ||||    
T  19906409 ttttttggctaaagcaacactcattttgaaacggagggagta 19906368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 19906618 - 19906655
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  19906618 ttggctaaagcgacactcattttgaaacggagggagta 19906655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 22298205 - 22298242
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  22298205 ttggctaaaacgacactcattttgaaacagagggagta 22298242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 32345783 - 32345746
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  32345783 ttggctaaagcgacactcattttgaaacggagggagta 32345746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 33939842 - 33939887
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||||||| ||||||||||  |||||||||||||||| |||||||    
T  33939842 gttattattacattggaaaccaaaagtgacattcattttaaaacaa 33939887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 35850559 - 35850608
Alignment:
Q  106 tgacattcatttaaaaacaaacttttttggctaaaacgacactcattttg 155  Q
    ||||||||||||  ||||||  ||||||| ||||||||||||||||||||    
T  35850559 tgacattcattttgaaacaattttttttgtctaaaacgacactcattttg 35850608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 37815928 - 37815965
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  37815928 ttggctaaaacgacactcattttaaaacggagggagta 37815965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 42121746 - 42121783
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  42121746 ttggctaaagcgacactcattttgaaatggaggaagta 42121783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 48684712 - 48684671
Alignment:
Q  128 ttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||| |||||||||||||||||||||||| ||||| ||||    
T  48684712 tttttttgctaaaacgacactcattttgaaatggagggagta 48684671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 715818 - 715778
Alignment:
Q  135 gctaaaacgacactcattttgaaacggaggaagtaaatttt 175  Q
    |||||||||||||||||||||||||||| | ||||| ||||    
T  715818 gctaaaacgacactcattttgaaacggatggagtaattttt 715778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 36447206 - 36447261
Alignment:
Q  106 tgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||  ||||||  |||||| |||||| |||||||||||||||||||||    
T  36447206 tgacattcattttgaaacaat-ttttttagctaaagcgacactcattttgaaacgga 36447261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 42044111 - 42044179
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||||||| ||||  ||| ||  |||||||  |||| ||||||||||||||||||||||| |||||    
T  42044111 aaagtgacattaattttgaaataattttttttgattaaagcgacactcattttgaaacggagggagtaa 42044179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 74; Significance: 8e-34; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 28 - 166
Target Start/End: Original strand, 9698 - 9837
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaaa 126  Q
    ||||||||||||||| |||| |||||||||||||||||||||           ||||||||||||||||||||||||| |||||||||||| |||||||     
T  9698 tttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaaatgacattcattttaaaacaat 9797  T
Q  127 cttttttggctaaaacgacactcattttgaaacggaggaa 166  Q
     ||||||||||||||||||| |||||||||||||||||||    
T  9798 tttttttggctaaaacgacagtcattttgaaacggaggaa 9837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 9609 - 9572
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  9609 ttggctaaaacgacactcattttgaaacggagggagta 9572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 5e-32; HSPs: 75)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 27 - 162
Target Start/End: Original strand, 14620550 - 14620686
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||| |||||||||||||||| |||||||||           ||||||||||||||||||||||||||||||||||||||  ||| ||    
T  14620550 ctttggaagtagtgtaacataatattaattgaaaggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaataa 14620649  T
Q  126 acttttttggctaaaacgacactcattttgaaacgga 162  Q
      |||||||||||||||||||||||||||||||||||    
T  14620650 ttttttttggctaaaacgacactcattttgaaacgga 14620686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 27 - 154
Target Start/End: Complemental strand, 39566280 - 39566152
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||| |||| |||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||| |||||||    
T  39566280 ctttggaagtagtgtaacatattattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttaaaacaa 39566181  T
Q  126 acttttttggctaaaacgacactcatttt 154  Q
    | ||||| |||||||||||||||||||||    
T  39566180 attttttgggctaaaacgacactcatttt 39566152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 29 - 171
Target Start/End: Original strand, 42104121 - 42104265
Alignment:
Q  29 ttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaaac 127  Q
    |||||||||||||| |||| |||||||||||||||| ||||           ||||||||||||||||||||||||||||||||||||||  ||||||      
T  42104121 ttggaagtagtgtaacatagtattaattgaagggtaaaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaatt 42104220  T
Q  128 tttt-ttggctaaaacgacactcattttgaaacggaggaagtaaa 171  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||    
T  42104221 tttttttggctaaaacgacactcattttgaaacggagggagtaaa 42104265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 27 - 169
Target Start/End: Original strand, 2729842 - 2729985
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||| |||| | |||||||||||||||||||           ||||||||||||||||||| ||||||||||||||||||  ||||||    
T  2729842 ctttggaagtagtgtaacatagttttaattgaagggtacaattgaaaagaaaaagttattattgcattggaaagtgaaagtgacattcattttgaaacaa 2729941  T
Q  126 acttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
      |||||||| |||||||||||||||||||||||||||| ||||    
T  2729942 gtttttttggttaaaacgacactcattttgaaacggagggagta 2729985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 34 - 170
Target Start/End: Original strand, 21319373 - 21319510
Alignment:
Q  34 agtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttt 132  Q
    ||||||||| ||||||||||||||||||||||||||           |||||||||||||||||| |||||||||||||||||||  ||||||| |||||    
T  21319373 agtagtgtaacataatattaattgaagggtacaattgaaaagaaaaagttattattgcattggaagctgaaagtgacattcattttgaaacaaatttttt 21319472  T
Q  133 tggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    || ||||||||| ||||||||||||||| || ||||||    
T  21319473 tgactaaaacgatactcattttgaaacgaagaaagtaa 21319510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 10345042 - 10345132
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaa-acttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||   ||||||||||||| ||||||||||||||||||||||| ||||    
T  10345042 gttattattgcattggaaactgaaagtgacattcattttgaaacaatttttttttggctaaagcgacactcattttgaaacggagggagta 10345132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 80 - 164
Target Start/End: Complemental strand, 7317071 - 7316987
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggagg 164  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||  |||||| |||||| ||||||||||||| |||||||||    
T  7317071 gttattattgcattggaaactgaaagtgacattcattttgaaacaatttttttttgctaaagcgacactcattttaaaacggagg 7316987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 80 - 177
Target Start/End: Original strand, 42978176 - 42978273
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta-aattttag 177  Q
    ||||||||||||||| ||||||||||||| |||||||| ||||||   |||||| |||||||||||||||||||| |||||||||||||| ||||||||    
T  42978176 gttattattgcattgaaaactgaaagtgatattcattttaaaacatt-ttttttagctaaaacgacactcattttaaaacggaggaagtataattttag 42978273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 27 - 169
Target Start/End: Original strand, 3306065 - 3306207
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnng-ttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||| || | |||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||| ||||  |    
T  3306065 ctttggaagtagtgtaacagagtattaattgaagggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcattttaaaa-ta 3306163  T
Q  126 acttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    | ||||||| |||||| |||||||||||| ||||||||| ||||    
T  3306164 atttttttgactaaaatgacactcattttaaaacggagggagta 3306207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 80 - 176
Target Start/End: Original strand, 3025041 - 3025137
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaatttta 176  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||  |||||| |||||| ||||||| ||||||||||||| | ||||| |||||    
T  3025041 gttattattgcattggaaactaaaagtgacattcattttgaaacaattttttttagctaaagcgacacttattttgaaacggatggagtaactttta 3025137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 26660798 - 26660707
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttg--gctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||| ||| |||||||||||||||||| |||||||  |||||||  |||||||| ||||||||||| ||||||||||||||    
T  26660798 gttattattgcattgaaaattgaaagtgacattcattttaaaacaattttttttgttgctaaaacaacactcattttaaaacggaggaagta 26660707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 26932391 - 26932300
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttg--gctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||| ||| |||||||||||||||||| |||||||  |||||||  |||||||| ||||||||||| ||||||||||||||    
T  26932391 gttattattgcattgaaaattgaaagtgacattcattttaaaacaattttttttgttgctaaaacaacactcattttaaaacggaggaagta 26932300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 21375768 - 21375842
Alignment:
Q  87 ttgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||| ||||||||||||||||| |||| |||||||  |||||||||||||||||||||||||||||||||||    
T  21375768 ttgcattgaaaactgaaagtgacatttattttaaaacaat-ttttttggctaaaacgacactcattttgaaacgga 21375842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 27797824 - 27797743
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||||||||||||||||||||||||||||||| ||||  || |||||| ||| |||||||| |||||||||||||||    
T  27797824 gttattattgcattggaaactgaaagtgacattcattttaaaa-taatttttttagctcaaacgacaatcattttgaaacgga 27797743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 169
Target Start/End: Complemental strand, 39504819 - 39504676
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttatta-ttgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||||||||||||| ||||||||||||| |||| |||||||           ||||||| ||||||||||||||||||||||||||||||| |||||||    
T  39504819 tttggaagtagtgtaacataatattaattaaaggatacaattgaaaagaaaaagttattaattgcattggaaactgaaagtgacattcattttaaaacaa 39504720  T
Q  126 acttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
      ||||||  ||||||||||| | ||||||||| ||||| ||||    
T  39504719 ttttttttaactaaaacgacatttattttgaaatggagggagta 39504676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 36164930 - 36164853
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaac 159  Q
    ||||||| ||||||||||||||||| |||||||||||| |||| ||  ||||||||||||||||||||||||||| ||||    
T  36164930 gttattactgcattggaaactgaaaatgacattcattttaaaataa--ttttttggctaaaacgacactcattttaaaac 36164853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 31041970 - 31041887
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaa-acttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||||||||||||||||||| |||||| || ||||   |||||||| ||||| ||||||||||||||||||||    
T  31041970 gttattattgcattggaaactgaaagtgacaatcattttaatacaatttttttttggttaaaatgacactcattttgaaacgga 31041887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 175
Target Start/End: Complemental strand, 38369915 - 38369821
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaatttt 175  Q
    ||||||||||||||||||| | ||||||| |||||||| |||||||  ||||||  ||||||||||| ||||||| ||||||||| ||||||||||    
T  38369915 gttattattgcattggaaa-taaaagtgatattcattttaaaacaatttttttttactaaaacgacattcattttaaaacggagggagtaaatttt 38369821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 169
Target Start/End: Original strand, 34446083 - 34446226
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||| |||| |||||||||||||||||||||           |||||||||| |||| ||||||||| ||||||||||||  ||||||    
T  34446083 ctttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaatgttattattgtattgaaaactgaaaatgacattcattttgaaacaa 34446182  T
Q  126 -acttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
       |||||| |||||||||||||||| ||||||||||||| ||||    
T  34446183 ttttttttttgctaaaacgacactca-tttgaaacggagggagta 34446226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 81 - 173
Target Start/End: Complemental strand, 21195421 - 21195329
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaatt 173  Q
    |||||||||||||||||||| ||| ||||| ||||||  ||| |||  |||||| | ||||||||||||||||||||||||| | ||||||||    
T  21195421 ttattattgcattggaaacttaaattgacaatcattttgaaataaatatttttgaccaaaacgacactcattttgaaacggacggagtaaatt 21195329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 163
Target Start/End: Original strand, 34208951 - 34209091
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcatt---ggaaactgaaagtgacattcatttaaaaac 123  Q
    |||||||||||||||  |||||||||||||||||||| ||||           ||||||||||||||   ||||||||||||||||||||||||  ||||    
T  34208951 tttggaagtagtgtaatataatattaattgaagggtataattgaaaaaaaaaagttattattgcattattggaaactgaaagtgacattcattttgaaac 34209050  T
Q  124 aaacttttt-tggctaaaacgacactcattttgaaacggag 163  Q
    ||  ||||| |||||||||| ||||||||||| ||||||||    
T  34209051 aatttttttctggctaaaacaacactcattttaaaacggag 34209091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 80 - 164
Target Start/End: Original strand, 43584487 - 43584571
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggagg 164  Q
    ||||||||||||||| |||||||||  ||||||||||| |||||||  |||||| |||||| ||| |||||||||||||| ||||    
T  43584487 gttattattgcattgaaaactgaaaacgacattcattttaaaacaattttttttagctaaagcgatactcattttgaaacagagg 43584571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 793737 - 793804
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||||| ||| ||||||    
T  793737 aaagtgacattcattttgaaacaaatttttttggctaaagcgacactcattttgaaatggaagaagta 793804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 154
Target Start/End: Complemental strand, 6519073 - 6518944
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||| |||||||||| |||| |||||||||||||||||||||           ||||||||||||||| |||||||||| |||||||||||  ||||||    
T  6519073 ctttgaaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagcgacattcattttgaaacaa 6518974  T
Q  126 -acttttttggctaaaacgacactcatttt 154  Q
       |||||| ||||||||||||||||||||    
T  6518973 ttttttttttgctaaaacgacactcatttt 6518944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 172
Target Start/End: Original strand, 4911262 - 4911351
Alignment:
Q  82 tattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaat 172  Q
    ||||||| ||||||||||| ||||||||||| ||||  ||||||  ||||||| || |||||||||||||||||||||||| | |||||||    
T  4911262 tattattacattggaaactaaaagtgacatttattttgaaacaattttttttgact-aaacgacactcattttgaaacggatggagtaaat 4911351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 158
Target Start/End: Complemental strand, 24281035 - 24280960
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaa 158  Q
    |||||||||||||||||||| ||||||||||||||||  ||||||  ||||||  ||||||||||| |||||||||||    
T  24281035 ttattattgcattggaaactaaaagtgacattcattttgaaacaa--tttttttactaaaacgacattcattttgaaa 24280960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 158
Target Start/End: Original strand, 24381177 - 24381252
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaa 158  Q
    |||||||||||||||||||| ||||||||||||||||  ||||||  ||||||  ||||||||||| |||||||||||    
T  24381177 ttattattgcattggaaactaaaagtgacattcattttgaaacaa--tttttttactaaaacgacattcattttgaaa 24381252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 31055780 - 31055698
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||| |||| ||| ||| |||||||||||||| |||| ||  |||||||||||||| |||||| |||||||||||||    
T  31055780 gttattattgaattgaaaattgagagtgacattcattttaaaataattttttttggctaaaatgacacttattttgaaacgga 31055698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 158
Target Start/End: Complemental strand, 39730002 - 39729924
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaa 158  Q
    ||||||||||||||||||||||||| | ||||||||||  ||| | | |||||| |||||||||||| |||||||||||    
T  39730002 gttattattgcattggaaactgaaaataacattcattttgaaatatattttttttgctaaaacgacattcattttgaaa 39729924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 13761654 - 13761522
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnngtt-attattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||| |||| |||||||||||||||||||||           || |||||||||||| ||| ||||||||||||||||||  ||||||    
T  13761654 ctttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaatttattattgcattgaaaagtgaaagtgacattcattttgaaacaa 13761555  T
Q  126 acttttttggctaaaacgacactcattttgaaacg 160  Q
      |||||||  ||||||||||||| |||| |||||    
T  13761554 --ttttttgattaaaacgacactcgttttaaaacg 13761522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 843060 - 842972
Alignment:
Q  84 ttattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaat 172  Q
    ||||||||||| ||||||||||||||||||||||  ||||||  ||||||  ||||||| ||||||||||| |||| || | |||||||    
T  843060 ttattgcattgcaaactgaaagtgacattcatttcgaaacaatttttttttactaaaacaacactcattttaaaacagatggagtaaat 842972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 9066534 - 9066622
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||| ||||||||||| ||||||||||  ||||||  ||| ||| ||||||||||| | ||||||||| ||||| ||||    
T  9066534 ttattattgcattgaaaactgaaagtaacattcattttgaaacaatttttcttgactaaaacgacatttattttgaaatggagggagta 9066622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 166780 - 166847
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||  ||||||  |||||| |||||| ||||||||||||||||||||||| ||||    
T  166780 aaagtgacattcattttgaaacaatttttttttgctaaagcgacactcattttgaaacggagggagta 166847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 4967544 - 4967611
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||||| |||||||  |||||| | ||||| |||||||||||||||||||||| ||||    
T  4967544 aaagtgacattcattttaaaacaatttttttttgttaaaatgacactcattttgaaacggagggagta 4967611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 80 - 170
Target Start/End: Original strand, 7579979 - 7580068
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    |||||||||| |||| ||||||||||| |||||||||| ||||| || | ||||| |||||||||||||| |||| ||||| | |||||||    
T  7579979 gttattattgtattgaaaactgaaagtaacattcattttaaaac-aattattttgactaaaacgacactcgttttaaaacgaatgaagtaa 7580068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 15167120 - 15167210
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaaca-aacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||| ||||||||||||||||||||||  |||||   ||||| ||| |||||||||||| | ||| ||||||||| ||||    
T  15167120 gttattattgcattgaaaactgaaagtgacattcattttgaaacatttcttttgtggttaaaacgacacttactttaaaacggagggagta 15167210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 169
Target Start/End: Original strand, 39804166 - 39804248
Alignment:
Q  88 tgcattggaaactgaaagtgacattcatttaaaaacaa-acttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||||| ||||||||  ||||||   ||||||| ||||||||||||| ||||| ||||||||| ||||    
T  39804166 tgcattggaaactgaaagtgatattcattttgaaacaatttttttttgactaaaacgacacttattttaaaacggagggagta 39804248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 34171186 - 34171118
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    |||||||||||||||| |||||||  ||||||   |||||||||||||||||| ||| |||||||||||    
T  34171186 aaagtgacattcattttaaaacaattttttttttataaaacgacactcattttaaaatggaggaagtaa 34171118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 36660449 - 36660381
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||||||||||||  ||||||  |||||||||||||  |||||||||||||||||| ||| |||||    
T  36660449 aaagtgacattcattttgaaacaattttttttggctaaagtgacactcattttgaaacgaagggagtaa 36660381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 14980170 - 14980237
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||  ||||||| |||||| ||||||  ||| |||||||||||||||||| ||||    
T  14980170 aaagtgacattcattttgaaacaaatttttttagctaaagtgactctcattttgaaacggagggagta 14980237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 155
Target Start/End: Original strand, 40776686 - 40776761
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttg 155  Q
    ||||||||| ||||| ||| ||||||||||||||| || |||| ||  |||||| |||||| ||||||||||||||    
T  40776686 gttattattacattgaaaaatgaaagtgacattcaatttaaaataatttttttttgctaaagcgacactcattttg 40776761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 4751662 - 4751731
Alignment:
Q  102 aaagtgacattcatttaaaaacaa--acttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||  ||||||  | |||||| |||||| ||||||||||||||||||||||| ||||    
T  4751662 aaagtgacattcattttgaaacaattattttttttgctaaagcgacactcattttgaaacggagggagta 4751731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 163
Target Start/End: Original strand, 15776593 - 15776670
Alignment:
Q  85 tattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggag 163  Q
    ||||||||||||||   |||||||||||||||| ||||| || ||||||  |||||| |||||||||||| ||||||||    
T  15776593 tattgcattggaaatcaaaagtgacattcattttaaaac-aattttttttactaaaatgacactcattttaaaacggag 15776670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 32158576 - 32158526
Alignment:
Q  120 aaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||| |||||| |||||| ||||||||||||||||||||||| |||||    
T  32158576 aaacaaatttttttagctaaagcgacactcattttgaaacggagggagtaa 32158526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 39335260 - 39335302
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaatt 69  Q
    |||||||||||||||| |||| |||||||||||||||||||||    
T  39335260 ctttggaagtagtgtaacatagtattaattgaagggtacaatt 39335302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 42661996 - 42662038
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaatt 69  Q
    |||||||||||||||| |||| |||||||||||||||||||||    
T  42661996 ctttggaagtagtgtaacatagtattaattgaagggtacaatt 42662038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 4630908 - 4630820
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||| |||| ||||||||||||||||| |||| |||| ||  |||||| |||||| ||||  ||||||||||| ||||| ||||    
T  4630908 gttattattgtattgaaaactgaaagtgacatttattttaaaa-aatatttttttgctaaagcgacggtcattttgaaaaggagggagta 4630820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 154
Target Start/End: Original strand, 8336466 - 8336593
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaatt-nnnnnnnnnngttattattgcattggaaactgaaagtgacattcatttaaaaacaaa 126  Q
    ||||||||||||||| |||| |||||||||||| ||||||||           ||||||||||||||| ||| || |||||||||||||||  ||| |      
T  8336466 tttggaagtagtgtaacatagtattaattgaagagtacaattgaaaaaaagaagttattattgcattgaaaaatggaagtgacattcattttgaaatatt 8336565  T
Q  127 cttttttggctaaaacgacactcatttt 154  Q
     | |||| ||||||||||||||||||||    
T  8336566 ttattttagctaaaacgacactcatttt 8336593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 40330822 - 40330902
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgg 161  Q
    ||||||||||| ||||||| |||||||||  |||| ||  || |||  | ||||||||||||||||||||||||||||||||    
T  40330822 gttattattgctttggaaaatgaaagtgatgttcaatttgaaccaat-tgttttggctaaaacgacactcattttgaaacgg 40330902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 24381072 - 24381159
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||| ||||||  ||||| ||||||| |||||||| ||||  || ||||||  |||||| |||||||||||||||||||| ||||||    
T  24381072 ttattagtgcattaaaaactaaaagtgatattcattttaaaattaattttttta-ctaaaatgacactcattttgaaacggatgaagta 24381159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 38982276 - 38982336
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||||||||| |||||||  |||||| ||||||  |||||||||| |||||||||    
T  38982276 aaagtgacattcattttaaaacaattttttttagctaaagtgacactcattatgaaacgga 38982336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 107 - 170
Target Start/End: Complemental strand, 15566514 - 15566451
Alignment:
Q  107 gacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    |||||| ||||  ||||||| |||||| |||||| ||||||||||||| ||||||||| |||||    
T  15566514 gacatttattttgaaacaaattttttttgctaaagcgacactcattttaaaacggagggagtaa 15566451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 38362247 - 38362335
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggct-aaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||| ||| ||||||||||||||||||  ||||  | |||||  | | ||||||||| ||||||| ||||||||||||||    
T  38362247 gttattattgcattgaaaattgaaagtgacattcattttgaaac--attttttcagttaaaaacgacattcattttaaaacggaggaagta 38362335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 170
Target Start/End: Original strand, 7317221 - 7317255
Alignment:
Q  136 ctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    |||||||||||||||||||||||| ||||||||||    
T  7317221 ctaaaacgacactcattttgaaacagaggaagtaa 7317255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 21375707 - 21375749
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaatt 69  Q
    ||||| |||||||||| |||| |||||||||||||||||||||    
T  21375707 ctttgaaagtagtgtaacatagtattaattgaagggtacaatt 21375749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 27600442 - 27600361
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||||||||||||||  | ||| |||| ||||| || |||||| | |||||||| ||| ||||| |||||||    
T  27600442 gttattattgcattggaaactgaaagcaatatttattttaaaac-aattttttttgttaaaacgatacttattttaaaacgga 27600361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 36073740 - 36073821
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||| ||| | ||| ||||||||||||| |||| || |||||| || |||  |||||||||||| |||||||    
T  36073740 gttattattgcattgaaaatttaaaatgacattcatttagaaac-aattttttttgccaaagtgacactcattttaaaacgga 36073821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 170
Target Start/End: Complemental strand, 38982103 - 38982065
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||||||||||| ||||||||||||||| |||||||    
T  38982103 ttggctaaaacgacattcattttgaaacggatgaagtaa 38982065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 4631127 - 4631160
Alignment:
Q  136 ctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||||||||||||| ||||    
T  4631127 ctaaaacgacactcattttgaaacggagggagta 4631160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 10344888 - 10344855
Alignment:
Q  136 ctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||||||||||||| ||||    
T  10344888 ctaaaacgacactcattttgaaacggagggagta 10344855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 169
Target Start/End: Complemental strand, 24281139 - 24281053
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||| ||||||  ||||| ||||||| |||||||| ||||  || |||||   |||||| |||||||||||||||||||| ||||||    
T  24281139 ttattagtgcattaaaaactaaaagtgatattcattttaaaattaatttttta--ctaaaatgacactcattttgaaacggatgaagta 24281053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 24436591 - 24436652
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggag 163  Q
    ||||||||||||||||  ||||||| || |||||||||| |||||||  |||||||| ||||    
T  24436591 aaagtgacattcattttgaaacaaatttgtttggctaaagcgacacttgttttgaaatggag 24436652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 28640104 - 28640031
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaatttt 175  Q
    ||||||||||| |||| |||| ||  |||||||||| || ||||||||||| | ||||||||| |||| |||||    
T  28640104 aaagtgacatttattttaaaataattttttttggctgaagcgacactcattataaaacggagggagtatatttt 28640031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 29807372 - 29807413
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaatt 69  Q
    ||||||||||||||| |||| ||||||||||| |||||||||    
T  29807372 tttggaagtagtgtaacatagtattaattgaatggtacaatt 29807413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 34534454 - 34534414
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaatt 69  Q
    |||||||||||||| ||||| |||||||||||||||||||||    
T  34534454 tttggaagtagtgt-gcatagtattaattgaagggtacaatt 34534414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 35766010 - 35766047
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcattt 117  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  35766010 gttattattgtattgaaaactgaaagtgacattcattt 35766047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 36783559 - 36783596
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  36783559 ttggctaaagcgatactcattttgaaacggaggaagta 36783596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 42104012 - 42103975
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  42104012 ttggctaaagcgacactcattttgaaacggagggagta 42103975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 4371559 - 4371591
Alignment:
Q  137 taaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||||||||||||||||| ||||    
T  4371559 taaaacgacactcattttgaaacggagggagta 4371591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 4742398 - 4742466
Alignment:
Q  102 aaagtgacattcatttaaaaacaaac-ttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||  ||||||   ||||||  ||||| ||||||||||||||||||||||| ||||    
T  4742398 aaagtgacattcattttgaaacaattattttttttctaaagcgacactcattttgaaacggagggagta 4742466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 164
Target Start/End: Complemental strand, 7721139 - 7721056
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggagg 164  Q
    ||||||||||||||| ||||  ||||||| ||||||||  |||| || ||||||   |||||||||||||||||| ||| |||||    
T  7721139 gttattattgcattgaaaacataaagtgatattcattttgaaac-aatttttttaattaaaacgacactcattttaaaatggagg 7721056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 24436489 - 24436457
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggagg 164  Q
    ||||||||||||||||||||||| |||||||||    
T  24436489 ttggctaaaacgacactcattttaaaacggagg 24436457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 28798048 - 28797980
Alignment:
Q  107 gacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaatttt 175  Q
    |||||||||||  |||||||  ||||| ||||||  |||||||||||||||||| ||| ||||| ||||    
T  28798048 gacattcattttgaaacaaatattttttgctaaagagacactcattttgaaacgaagggagtaagtttt 28797980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 33585106 - 33585166
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||| ||||||| |||||||  ||||||  |||||  ||||||||||||||||||||    
T  33585106 aaagtgacgttcattttaaaacaattttttttatctaaagtgacactcattttgaaacgga 33585166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 33822634 - 33822702
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||||||||||||  || |||  ||||||| |||||  || ||||||||||||||||||| |||||    
T  33822634 aaagtgacattcattttgaatcaattttttttgactaaagtgatactcattttgaaacggagggagtaa 33822702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 39463302 - 39463213
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  39463302 gttattattgcattggaaactgaaagtgacattcattttgaaacaattttttttggctaaaacgacactcattttgaaacggagggagta 39463213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 28 - 169
Target Start/End: Original strand, 39698723 - 39698864
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaaa 126  Q
    |||||||||| |||| |||| |||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||  |||| ||    
T  39698723 tttggaagtaatgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaac-aa 39698821  T
Q  127 cttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
     ||||||||||||||||||||||||||||||||||||| ||||    
T  39698822 tttttttggctaaaacgacactcattttgaaacggagggagta 39698864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 27 - 164
Target Start/End: Complemental strand, 17921053 - 17920915
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||| ||||||||||||||||| ||||||||           ||||||||||||||| |||||||||||||||||||||| |||||||    
T  17921053 ctttggaagtagtgtaacataatattaattgaagagtacaattgtaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttaaaacaa 17920954  T
Q  126 acttttttggctaaaacgacactcattttgaaacggagg 164  Q
      |||||| |||||||||||| ||||||| |||||||||    
T  17920953 tttttttttgctaaaacgacattcattttaaaacggagg 17920915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 80 - 163
Target Start/End: Original strand, 15160556 - 15160639
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggag 163  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||  ||||||||||||| ||||||||||||||||||||||    
T  15160556 gttattattgcattggaaactgaaagtgacattcattttgaaacaattttttttggctaaagcgacactcattttgaaacggag 15160639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 27 - 164
Target Start/End: Complemental strand, 4989575 - 4989438
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||| |||||||||| ||||||||||||||||||||||||||           ||||||||||||||||||||||||||||| ||||||||  |||| |    
T  4989575 ctttgtaagtagtgtaacataatattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgatattcattttgaaac-a 4989477  T
Q  126 acttttttggctaaaacgacactcattttgaaacggagg 164  Q
    | ||||||  ||||||||||||||||||| |||||||||    
T  4989476 attttttttactaaaacgacactcattttaaaacggagg 4989438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 9812216 - 9812136
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacg 160  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||  |||||| |||||||||| |||||||||||||||    
T  9812216 gttattattgcattagaaactgaaagtgacattcattttaaaacaatttttttttgctaaaacgatactcattttgaaacg 9812136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 80 - 175
Target Start/End: Original strand, 37559643 - 37559738
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaatttt 175  Q
    |||||||||| |||||||||||||||||||||| |||| |||||||  |||||| |||||| ||||||||||||||||||||| | ||||| ||||    
T  37559643 gttattattgtattggaaactgaaagtgacattgattttaaaacaatttttttttgctaaagcgacactcattttgaaacggatggagtaattttt 37559738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 39765969 - 39766048
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaac 159  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||  ||||||||||||| ||||||||||||||||||    
T  39765969 gttattattgcattgaaaactgaaagtgacattcattttgaaacaattttttttggctaaagcgacactcattttgaaac 39766048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 28 - 159
Target Start/End: Original strand, 43084684 - 43084814
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaaa 126  Q
    ||||||||||||||| |||| ||||||||||| |||||||||           ||||||||||||||| |||||||||||||||||||||| |||| ||     
T  43084684 tttggaagtagtgtaacatagtattaattgaaaggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttaaaataa- 43084782  T
Q  127 cttttttggctaaaacgacactcattttgaaac 159  Q
     |||||| |||||||||||||||||||||||||    
T  43084783 -tttttttgctaaaacgacactcattttgaaac 43084814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 159
Target Start/End: Complemental strand, 7839554 - 7839422
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnng-ttattattgcattggaaactgaaagtgacattcatttaaaaacaaa 126  Q
    ||||||||||||||| |||||||||||||||| |||| ||||          | |||||||||||||||||| ||||||||||||||||||  ||||||     
T  7839554 tttggaagtagtgtaacataatattaattgaaaggtaaaattgaaaagaaaaggttattattgcattggaaattgaaagtgacattcattttgaaacaat 7839455  T
Q  127 cttttttggctaaaacgacactcattttgaaac 159  Q
     |||||| |||||||||||||||||||| ||||    
T  7839454 ttttttttgctaaaacgacactcattttaaaac 7839422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 40362478 - 40362396
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||  ||||||  ||||| |||||||||||||||||||||    
T  40362478 gttattattgcattgaaaactgaaagtgacattcattttaaaacaattttttttttctaaagcgacactcattttgaaacgga 40362396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 27 - 169
Target Start/End: Original strand, 4760614 - 4760756
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnng-ttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||| |||||||||| |||| |||||||||||||||||||||            ||||| |||||||||||| |||||||||||||||||| ||||| |    
T  4760614 ctttgaaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaaattattgttgcattggaaaatgaaagtgacattcattttaaaac-a 4760712  T
Q  126 acttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    | ||||||||||||||||||||| ||||| ||||||||| ||||    
T  4760713 atttttttggctaaaacgacacttattttaaaacggagggagta 4760756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 29312303 - 29312391
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||||||||| ||||||||||||  ||||||  |||||| ||||||||||||||||||||||||| || ||||||    
T  29312303 gttattattgcattggaaactgaaaatgacattcattt-taaacaatttttttttgctaaaacgacactcattttgaaacagatgaagta 29312391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 6116115 - 6116197
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||| |||| |||||||| |||||||| |||||||  |||||| |||||||||||||||||| |||||||||    
T  6116115 gttattattgcattgaaaaccgaaagtgatattcattttaaaacaatttttttttgctaaaacgacactcattctgaaacgga 6116197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 9880612 - 9880699
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||||||||||  ||||||||||||||  ||||||  ||||||| ||||||||||||||||||| ||||||||| ||||    
T  9880612 ttattattgcattggaaactgtgagtgacattcattttgaaacaat-ttttttgactaaaacgacactcattttaaaacggagggagta 9880699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 14234329 - 14234416
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||| |||| | |||||||||||||||| ||||| || |||||| |||||||||||||||||||| ||||||| ||||||    
T  14234329 ttattattgcattagaaattaaaagtgacattcattttaaaac-aattttttttgctaaaacgacactcattttaaaacggatgaagta 14234416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 81 - 169
Target Start/End: Complemental strand, 43724423 - 43724336
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||||||||||||||||| ||||||||  |||| || |||||| |||||| |||| |||||||||||||||| ||||||    
T  43724423 ttattattgcattggaaactgaaagtgaaattcattttgaaac-aatttttttagctaaagcgacgctcattttgaaacggatgaagta 43724336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 163
Target Start/End: Original strand, 31693731 - 31693814
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggag 163  Q
    ||||||||||||||| ||||||||||||| |||||||| |||||||| ||||| |  |||||||||||| ||||| ||||||||    
T  31693731 gttattattgcattgaaaactgaaagtgatattcattttaaaacaaattttttggattaaaacgacacttattttaaaacggag 31693814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 169
Target Start/End: Original strand, 31899304 - 31899446
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnng-ttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||| ||||||||||||||||| ||||||||            |||||||||||||||||||||||||||| || |||||  ||| ||    
T  31899304 ctttggaagtagtgtaacataatattaattgaagagtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgatatccattt-gaaataa 31899402  T
Q  126 acttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
      |||||| |||||||||||  ||||||||||||||||| ||||    
T  31899403 ttttttttagctaaaacgactgtcattttgaaacggagggagta 31899446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 44713577 - 44713488
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||| ||||||||| |||||||| |||||||  ||||||  ||||||| ||| ||||||| ||||||||| ||||    
T  44713577 gttattattgcattggaaaatgaaagtgatattcattttaaaacaattttttttacctaaaacaacaatcattttaaaacggagggagta 44713488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 81 - 172
Target Start/End: Complemental strand, 514916 - 514827
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaat 172  Q
    |||||||||||||| ||| |||||||||||||||||| |||  | | |||||| | || ||||||||||||||||||||||||| |||||||    
T  514916 ttattattgcattgaaaattgaaagtgacattcattttaaa--atattttttttgttacaacgacactcattttgaaacggaggtagtaaat 514827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 88 - 171
Target Start/End: Complemental strand, 22699418 - 22699335
Alignment:
Q  88 tgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaa 171  Q
    |||||||||||||||| ||||||| |||||  ||||||   ||||||| |||||||||| ||||||||||||||||| ||||||    
T  22699418 tgcattggaaactgaaggtgacatgcattttgaaacaattatttttggttaaaacgacattcattttgaaacggagggagtaaa 22699335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 163
Target Start/End: Original strand, 9304744 - 9304826
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggag 163  Q
    |||||||||||||||||||| ||||| ||||||||||  ||||||  ||||||   |||||||||||||||||| ||||||||    
T  9304744 ttattattgcattggaaactaaaagtcacattcattttgaaacaattttttttaattaaaacgacactcattttaaaacggag 9304826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 43448759 - 43448678
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||||||||||||||||| ||||||||  |||| || |||||||  |||||||| ||||||||| |||||||    
T  43448759 gttattattgcattggaaactgaaagtgatattcattttgaaac-aatttttttgattaaaacgatactcattttaaaacgga 43448678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 38329161 - 38329221
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||||||||| |||||||| ||||||| |||||  ||||||||||||||||||||    
T  38329161 aaagtgacattcattttaaaacaaatttttttgactaaagtgacactcattttgaaacgga 38329221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 170
Target Start/End: Original strand, 396323 - 396413
Alignment:
Q  80 gttattattgcattggaaactgaaa-gtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||||||||||  ||||||||| ||||||||||||| |||||||  ||||||| ||||| ||||||||||||| ||| ||||| |||||    
T  396323 gttattattgcatttcaaactgaaaagtgacattcattttaaaacaatgttttttg-ctaaagcgacactcattttaaaatggagggagtaa 396413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 6374457 - 6374374
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaa-acttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||   |||||| |||||||||||||||  ||| |||||||    
T  6374457 gttattattgcattgaaaactgaaagtgacattcattttgaaacaattttttttttgctaaaacgacactcgctttaaaacgga 6374374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 15750431 - 15750494
Alignment:
Q  100 tgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggag 163  Q
    |||||||||||||||| | |||||||  |||||||| |||||||||||||||||||||| ||||    
T  15750431 tgaaagtgacattcatcttaaaacaattttttttggttaaaacgacactcattttgaaagggag 15750494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 35356350 - 35356270
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||||||||||||| ||| ||||||||  ||| ||  |||||| |||||| ||||||| |||||||||||||    
T  35356350 gttattattgcattggaaactgaaaatgatattcattttgaaataa--tttttttgctaaagcgacactaattttgaaacgga 35356270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 87 - 169
Target Start/End: Complemental strand, 8471317 - 8471235
Alignment:
Q  87 ttgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||   |||| |||||||||||  ||||||  ||||||||||||| || |||||||||||||||||||| ||||    
T  8471317 ttgcattggaaatgtaaagcgacattcattttgaaacaattttttttggctaaagcggcactcattttgaaacggagggagta 8471235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 9022427 - 9022349
Alignment:
Q  91 attggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||  |||||||||||||||| |||||||   ||||||||||||| || ||||||||| ||||||||| ||||    
T  9022427 attggaaacgtaaagtgacattcattttaaaacaattctttttggctaaaatgatactcattttaaaacggagggagta 9022349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 29025856 - 29025930
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcatttt 154  Q
    ||||||||||||||||||||| |||||||||||| |||  ||||||  ||||||  ||||||||||| |||||||    
T  29025856 gttattattgcattggaaacttaaagtgacattcgttttgaaacaattttttttaactaaaacgacattcatttt 29025930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 35052487 - 35052425
Alignment:
Q  107 gacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||| |||||||  |||||| |||||| ||||||||||||||||||||||| ||||    
T  35052487 gacattcattttaaaacaatttttttttgctaaagcgacactcattttgaaacggagggagta 35052425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 43561381 - 43561299
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggag 163  Q
    |||||||||||||| |||||||| ||||||||||||| |||  ||  |||||| |||||||| | ||||||||| ||||||||    
T  43561381 ttattattgcattgaaaactgaaggtgacattcattttaaataaatttttttttgctaaaacaatactcattttaaaacggag 43561299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 40228617 - 40228556
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaa 141  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||  |||||| |||||||    
T  40228617 gttattattgcattgaaaactgaaagtgacattcattttgaaacaatttttttttgctaaaa 40228556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 22601157 - 22601089
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||||||||||||  |||||||  ||||||||||||  ||||||||| |||||||||||| |||||    
T  22601157 aaagtgacattcattttgaaacaaaactttttggctaaagtgacactcatcttgaaacggagggagtaa 22601089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 162
Target Start/End: Original strand, 18673256 - 18673290
Alignment:
Q  128 ttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||||||||||||||||||||||||||||    
T  18673256 ttttttggctaaaacgacactcattttgaaacgga 18673290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 27109941 - 27110019
Alignment:
Q  91 attggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||  |||||||||||||||||  |||||||  |||||||||||||| ||| ||||||| |||| |||| ||||    
T  27109941 attggaaatggaaagtgacattcattttgaaacaaatatttttggctaaaacaacattcattttaaaacagagggagta 27110019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 34168367 - 34168405
Alignment:
Q  131 tttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  34168367 tttggctaaaacgacactcattttgaaacggagggagta 34168405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 15227609 - 15227529
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||||||| ||  ||||||||||||||||||  ||||||  ||||| || |||||| ||||||||||| |||||||    
T  15227609 ttattattgcattgaaatttgaaagtgacattcattttgaaacaatatttttagg-taaaacaacactcattttaaaacgga 15227529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 43974901 - 43974938
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcattt 117  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  43974901 gttattattgcattggaaactaaaagtgacattcattt 43974938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 45359005 - 45359078
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcatttt 154  Q
    |||||||||||||| ||| ||||| ||||| ||||||  ||||||| |||||||  |||||||| |||||||||    
T  45359005 ttattattgcattgaaaattgaaaatgacagtcattttgaaacaaatttttttgattaaaacgaaactcatttt 45359078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 1774195 - 1774251
Alignment:
Q  106 tgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||||| |||||||  |||||||||||||  |||||||||||| |||||||    
T  1774195 tgacattcattttaaaacaattttttttggctaaagtgacactcattttaaaacgga 1774251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 133
Target Start/End: Complemental strand, 19438332 - 19438226
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaaa 126  Q
    |||||||||||||||  ||| |||||||||||||||||||||           ||||||||| ||||||||||||| ||||||||| ||||  |||||||    
T  19438332 tttggaagtagtgtaatatagtattaattgaagggtacaattgaaaagaaaaagttattattacattggaaactgagagtgacatttatttcgaaacaaa 19438233  T
Q  127 ctttttt 133  Q
     ||||||    
T  19438232 ttttttt 19438226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 36669885 - 36669921
Alignment:
Q  128 ttttttggctaaaacgacactcattttgaaacggagg 164  Q
    ||||||||||||||||||| |||||||||||||||||    
T  36669885 ttttttggctaaaacgacattcattttgaaacggagg 36669921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 41178396 - 41178431
Alignment:
Q  128 ttttttggctaaaacgacactcattttgaaacggag 163  Q
    |||||| |||||||||||||||||||||||||||||    
T  41178396 ttttttagctaaaacgacactcattttgaaacggag 41178431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 162
Target Start/End: Original strand, 4530070 - 4530100
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||||||||||||||||||||||||    
T  4530070 ttggctaaaacgacactcattttgaaacgga 4530100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 171
Target Start/End: Original strand, 6839415 - 6839449
Alignment:
Q  137 taaaacgacactcattttgaaacggaggaagtaaa 171  Q
    |||||||||||||||||| ||||||||||||||||    
T  6839415 taaaacgacactcatttttaaacggaggaagtaaa 6839449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 7612519 - 7612445
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaatttta 176  Q
    |||||||||||||||| |||||||  |||||| | ||||  |||||||||||| ||| ||||| |||| ||||||    
T  7612519 aaagtgacattcattttaaaacaatttttttttgttaaagtgacactcattttaaaagggagggagtacatttta 7612445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 18666637 - 18666719
Alignment:
Q  87 ttgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||   ||||||||||||||||  ||| ||  |||||| ||||||  || ||||||||||||||||||| ||||    
T  18666637 ttgcattggaaatgtaaagtgacattcattttgaaagaatttttttttgctaaagtgatactcattttgaaacggagggagta 18666719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 5295464 - 5295504
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaatt 69  Q
    |||||||||||||||  |||||||||||||||||||||||||    
T  5295464 tttggaagtagtgtat-ataatattaattgaagggtacaatt 5295504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 9022599 - 9022636
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  9022599 ttggctaaaacgacactcattttaaaacggagggagta 9022636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 9304690 - 9304731
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaatt 69  Q
    |||||||||||| || ||||| ||||||||||||||||||||    
T  9304690 tttggaagtagtataacataacattaattgaagggtacaatt 9304731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 13368058 - 13368147
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||| ||||||| ||| | ||| |  |||||  ||||||  |||||||| |||||| ||||||||||| ||||||||| ||||    
T  13368058 gttattattgcgttggaaattgataatgatacccattttgaaacaattttttttggttaaaacaacactcattttaaaacggagggagta 13368147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 19574483 - 19574442
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaatt 69  Q
    |||||||||||||||  ||| |||||||||||||||||||||    
T  19574483 tttggaagtagtgtaatatagtattaattgaagggtacaatt 19574442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 21201014 - 21200966
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcat 151  Q
    ||||||||||||||||  ||||||  ||||||||||||||||||||||||    
T  21201014 aaagtgacattcattttgaaacaat-ttttttggctaaaacgacactcat 21200966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 169
Target Start/End: Complemental strand, 32414762 - 32414681
Alignment:
Q  88 tgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||| ||| ||||||||||||  ||||||  ||||||  ||||||||||| | ||||| ||||| ||| ||||    
T  32414762 tgcattggaaactaaaaatgacattcattttgaaacaatttttttttactaaaacgacatttattttaaaacgaagggagta 32414681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 34156630 - 34156590
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaatt 69  Q
    ||||||||||||||| |||| |||||||||||||||||||||    
T  34156630 tttggaagtagtgta-catagtattaattgaagggtacaatt 34156590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 34168161 - 34168124
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  34168161 ttggctaaagcgacactcattttgaaacggagggagta 34168124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 34796789 - 34796874
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaa 166  Q
    ||||||||||||| |||||| ||||  ||||||||||  ||||||   |||||  ||||||| | ||||||||| |||||||||||    
T  34796789 ttattattgcattagaaactaaaaggaacattcattttgaaacaattctttttaactaaaacaatactcattttaaaacggaggaa 34796874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 39463461 - 39463498
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  39463461 ttggctaaagcgacactcattttgaaacggagggagta 39463498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 39765816 - 39765783
Alignment:
Q  136 ctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||||||||||||| ||||    
T  39765816 ctaaaacgacactcattttgaaacggagggagta 39765783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 117
Target Start/End: Original strand, 5295517 - 5295553
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcattt 117  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  5295517 ttattattgcattagaaacttaaagtgacattcattt 5295553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 5790827 - 5790883
Alignment:
Q  105 gtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgg 161  Q
    ||||||||||||| |||||||  ||||||  ||||||||||||| ||||| ||||||    
T  5790827 gtgacattcattttaaaacaattttttttatctaaaacgacacttattttaaaacgg 5790883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 11168888 - 11168924
Alignment:
Q  133 tggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  11168888 tggctaaagcgacactcattttgaaacggagggagta 11168924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 27 - 162
Target Start/End: Original strand, 24796 - 24932
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||||||||| |||| |||| |||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||  ||||||    
T  24796 ctttggaagtattgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 24895  T
Q  126 acttttttggctaaaacgacactcattttgaaacgga 162  Q
      |||||||| ||||||||||||||||||||||||||    
T  24896 ttttttttggataaaacgacactcattttgaaacgga 24932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 1e-29; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 27 - 170
Target Start/End: Complemental strand, 234131 - 233987
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||| |||| |||||||||||||||||||||           ||||||||||||||||||||| ||||||||||||||||  ||||||    
T  234131 ctttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactaaaagtgacattcattttgaaacaa 234032  T
Q  126 acttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
      |||||| ||||||||||||||||||||||||| |||| |||||    
T  234031 ttttttttagctaaaacgacactcattttgaaacagagggagtaa 233987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 81 - 176
Target Start/End: Original strand, 24163825 - 24163919
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaatttta 176  Q
    ||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| |||||||||||| ||||||||| |||| ||||||    
T  24163825 ttattattgcattggaaactgaaagtgacattcattttaaaac-aatttttttggctaaaatgacactcattttaaaacggagggagtatatttta 24163919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 29399988 - 29399899
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    |||||||||||||||||||||||||||||||||||||  ||||||  |||| | |||||||||||||||||||||||||||||| |||||    
T  29399988 ttattattgcattggaaactgaaagtgacattcattttgaaacaattttttgttgctaaaacgacactcattttgaaacggagggagtaa 29399899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 10540618 - 10540707
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||| ||||||||||||| ||||  ||||||  |||||| |||||||||||||||||||| ||||||||||||||    
T  10540618 gttattattgcattggaaattgaaagtgacatttattttgaaacaattttttttagctaaaacgacactcattttaaaacggaggaagta 10540707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 27 - 161
Target Start/End: Original strand, 23259381 - 23259516
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||| ||||||||||||| ||||||||||||           |||||| |||||||||||||||||| ||||||||||||  ||||||    
T  23259381 ctttggaagtagtgtaacataatattaatttaagggtacaattgaaaagtaaaagttatttttgcattggaaactgaaaatgacattcattttgaaacaa 23259480  T
Q  126 acttttttggctaaaacgacactcattttgaaacgg 161  Q
      |||||||| |||||| ||||||||||||||||||    
T  23259481 tattttttggataaaacaacactcattttgaaacgg 23259516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 28 - 162
Target Start/End: Complemental strand, 9940743 - 9940609
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaaa 126  Q
    |||||||||||||| | |||||||||||||||||||||||||           ||||||||||||||| ||||||||||||||| |||||| |||||||     
T  9940743 tttggaagtagtgt-gtataatattaattgaagggtacaattgaaaaagaaaagttattattgcattgaaaactgaaagtgacaatcattttaaaacaat 9940645  T
Q  127 cttttttggctaaaacgacactcattttgaaacgga 162  Q
     |||||| | |||| |||||||||||||||||||||    
T  9940644 ttttttttgttaaagcgacactcattttgaaacgga 9940609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 81 - 160
Target Start/End: Complemental strand, 32193744 - 32193665
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacg 160  Q
    ||||||||||||| |||||| ||||||||||| |||| |||||||| | ||||||||||||||||||||||||| |||||    
T  32193744 ttattattgcattagaaactaaaagtgacatttattttaaaacaaattattttggctaaaacgacactcattttaaaacg 32193665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 4850605 - 4850683
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaa 158  Q
    ||||||||||||||||||| ||||||||||||||||||  ||||||  |||||| |||||| |||||||||||||||||    
T  4850605 gttattattgcattggaaattgaaagtgacattcattttgaaacaatttttttttgctaaagcgacactcattttgaaa 4850683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 18737200 - 18737277
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaac 159  Q
    |||||||||||||||||||||||||||||||||||||| |||||||  |||||| | ||||||||| |||||||| ||||    
T  18737200 gttattattgcattggaaactgaaagtgacattcattttaaaacaa--ttttttagttaaaacgacgctcattttaaaac 18737277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 17246728 - 17246804
Alignment:
Q  91 attggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||| ||||||||||||||||  |||||   ||||||||||||||||||||||||||||||||||||| ||||    
T  17246728 attggaaacttaaagtgacattcattttgaaacat--ttttttggctaaaacgacactcattttgaaacggagggagta 17246804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 32429327 - 32429247
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||||||| | |||||||||||| |||  ||||||  ||||||||||||||||||||||||||| |||||||    
T  32429327 gttattattgcattggaaattaaaagtgacattcgttttgaaacaa--ttttttggctaaaacgacactcattttaaaacgga 32429247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 80 - 170
Target Start/End: Original strand, 13503958 - 13504048
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||||||||||||||||||||||||||||||||||  |||||   |||||| | ||||||| |||||||||| ||||| ||| |||||    
T  13503958 gttattattgcattggaaactgaaagtgacattcattttgaaacatttttttttagttaaaacgtcactcattttcaaacgaagggagtaa 13504048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 19675023 - 19674936
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||||||||| ||||||||||||  ||  |   ||||||||||||| ||||||||||||||||||||||| ||||    
T  19675023 gttattattgcattggaaactgaaaatgacattcattttgaattat--ttttttggctaaatcgacactcattttgaaacggagggagta 19674936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 12063621 - 12063710
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaa-acttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||||||||||||||||||||||||||  ||||||   |||||   ||||||||||||||||||||||| ||||| ||||    
T  12063621 ttattattgcattggaaactgaaagtgacattcatttggaaacaattatttttcttctaaaacgacactcattttgaaagggagggagta 12063710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 31443556 - 31443636
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacg 160  Q
    ||||||||||||||||||||||||| | ||||||||||  ||||||  |||||||| ||||| || |||||||||||||||    
T  31443556 gttattattgcattggaaactgaaaataacattcatttttaaacaattttttttggataaaaggatactcattttgaaacg 31443636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 21272212 - 21272301
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||| ||||||||||||||||||| |||||||| |||||||| |||||||  |||||   |||||||||| ||| ||||| ||||    
T  21272212 gttattattacattggaaactgaaagtgatattcattttaaaacaaatttttttgattaaaaaatcactcattttaaaatggagggagta 21272301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 82 - 162
Target Start/End: Original strand, 12322996 - 12323075
Alignment:
Q  82 tattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||||||||||||||||||||||||   || |   |||||| ||||||| ||||||||||||||||||||    
T  12322996 tattattgcattggaaactgaaagtgacattcattt-tgaatattttttttttgctaaaatgacactcattttgaaacgga 12323075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 82 - 154
Target Start/End: Original strand, 17552357 - 17552429
Alignment:
Q  82 tattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcatttt 154  Q
    ||||||||||||||||||||||| ||||||||||||  ||||||  ||||||  ||||||||||| |||||||    
T  17552357 tattattgcattggaaactgaaaatgacattcatttcgaaacaatttttttttactaaaacgacattcatttt 17552429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 29927228 - 29927169
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||||  ||||||  |||||||||||||||||||||||||||||||||||    
T  29927228 aaagtgacattcattttgaaacaat-ttttttggctaaaacgacactcattttgaaacgga 29927169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 577104 - 577024
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||| ||||||||||||| | | |||| |||||||  |||||| |||||||||| ||||||||| |||||||    
T  577104 gttattattgcattgaaaactgaaagtgatagttattttaaaacaa--tttttttgctaaaacgatactcattttaaaacgga 577024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 1924799 - 1924862
Alignment:
Q  106 tgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||| |||||||| |||||||||||||  ||||||||||||||||| |||| ||||    
T  1924799 tgacattcattttaaaacaaatttttttggctaaagtgacactcattttgaaacagagggagta 1924862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 3988854 - 3988933
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||||||||||||||||||||  ||| ||||  ||||||  |||||| |||| ||||||| |||||||||||||||    
T  3988854 ttattattgcattggaaactgaaagtg--atttattttgaaacaatttttttttgctagaacgacattcattttgaaacgga 3988933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 154
Target Start/End: Original strand, 1502854 - 1502923
Alignment:
Q  85 tattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcatttt 154  Q
    |||||||||||||||||||| ||||||| |||| ||||||   ||||||  |||||||||||||||||||    
T  1502854 tattgcattggaaactgaaaatgacattaattttaaaacattttttttttactaaaacgacactcatttt 1502923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 31233736 - 31233804
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttt-tttggctaaaacgacact 148  Q
    ||||||||||| || |||||||||||||||||||||| |||||||  ||| ||| ||||||||||||||    
T  31233736 ttattattgcaatgaaaactgaaagtgacattcattttaaaacaatttttgttttgctaaaacgacact 31233804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 159
Target Start/End: Original strand, 10520750 - 10520827
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaac 159  Q
    ||||||||| |||| ||| ||||||||||||| |||| ||||| || |||||| ||||||| |||||||||||| ||||    
T  10520750 ttattattgtattgaaaattgaaagtgacatttattttaaaac-aatttttttagctaaaatgacactcattttaaaac 10520827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 169
Target Start/End: Original strand, 29713462 - 29713606
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaatt-nnnnnnnnnngttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||| |||||||||| |||| |||||||||||||||||||||           |||||||||||||||||||| |||| ||||||||||||  ||        
T  29713462 ctttgaaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaacggaaaatgacattcattttgaatttt 29713561  T
Q  126 acttttt-tggctaaaacgacactcattttgaaacggaggaagta 169  Q
      ||||| | |||||||||||||| ||||| ||||||||||||||    
T  29713562 tttttttgttgctaaaacgacacttattttaaaacggaggaagta 29713606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 31275773 - 31275833
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||||  ||||||  |||||| |||||| ||||||| |||||||||||||    
T  31275773 aaagtgacattcattttgaaacaatttttttttgctaaagcgacacttattttgaaacgga 31275833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 6140621 - 6140564
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacg 160  Q
    |||| ||||||||||| ||||||| ||||||||||||||  |||| |||||||||||||    
T  6140621 aaagcgacattcattttaaaacaa-cttttttggctaaagtgacattcattttgaaacg 6140564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 12588569 - 12588527
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaa 122  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||    
T  12588569 gttattattgcattgcaaactgaaagtaacattcattttaaaa 12588527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 17345267 - 17345328
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggagg 164  Q
    ||||||| |||||||| |||||||  ||||||| |||||| |||||||||||||||| |||||    
T  17345267 aaagtgatattcattttaaaacaat-ttttttgactaaaatgacactcattttgaaatggagg 17345328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 26189523 - 26189469
Alignment:
Q  108 acattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||  ||||||  |||||||| |||| |||||||||||||||||||||    
T  26189523 acattcattttgaaacaattttttttggttaaagcgacactcattttgaaacgga 26189469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 34519263 - 34519317
Alignment:
Q  108 acattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||  ||||||  |||||| |||||||||||||||||||| |||||||    
T  34519263 acattcattttgaaacaatttttttttgctaaaacgacactcattttaaaacgga 34519317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 1135021 - 1134980
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaatt 69  Q
    |||||||||||||||  ||| |||||||||||||||||||||    
T  1135021 tttggaagtagtgtaatatagtattaattgaagggtacaatt 1134980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 30627289 - 30627322
Alignment:
Q  136 ctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||| ||||||||||||||    
T  30627289 ctaaaacgacactcattttaaaacggaggaagta 30627322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 176
Target Start/End: Original strand, 234229 - 234273
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagtaaatttta 176  Q
    |||| |||||||||||||||||||||||| ||| |||| ||||||    
T  234229 ttggttaaaacgacactcattttgaaacgaagggagtacatttta 234273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 28554740 - 28554796
Alignment:
Q  106 tgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||  ||||||| | |||| |||||| ||||||||||||| |||||||    
T  28554740 tgacattcattttgaaacaaattatttttgctaaagcgacactcattttaaaacgga 28554796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 5e-29; HSPs: 94)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 4133067 - 4132978
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||||||||| |||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  4133067 gttattattgcattggaaaccgaaagtgacattcattttgaaacaattttttttggctaaaacgacactcattttgaaacggagggagta 4132978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 28 - 162
Target Start/End: Complemental strand, 12342189 - 12342054
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaaa 126  Q
    ||||||||||||||| |||| |||||||||||||||||||||           |||||||||||||||||||| |||||||||||||||||  ||||||     
T  12342189 tttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaaccgaaagtgacattcattttgaaacaat 12342090  T
Q  127 cttttttggctaaaacgacactcattttgaaacgga 162  Q
     |||||||| ||||||||||||||||||||||||||    
T  12342089 tttttttggttaaaacgacactcattttgaaacgga 12342054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 27 - 172
Target Start/End: Original strand, 45081956 - 45082102
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnng-ttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||| ||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||   ||| ||    
T  45081956 ctttggaagtagtgtaacataatattaattgaagggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcattgtgaaataa 45082055  T
Q  126 acttttttggctaaaacgacactcattttgaaacggaggaagtaaat 172  Q
      ||||||||||||||||||||||| |||||||| |||| |||||||    
T  45082056 ttttttttggctaaaacgacactcaatttgaaaccgagggagtaaat 45082102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 169
Target Start/End: Original strand, 29396736 - 29396879
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||| ||||||||||||||||||||| ||||           |||||||||||||||||||| |||||||||||||||||  ||||||    
T  29396736 ctttggaagtagtgtaacataatattaattgaagggtataattgaaaagaaaaagttattattgcattggaaaccgaaagtgacattcattttgaaacaa 29396835  T
Q  126 acttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
      ||||||| ||||| ||||||||||||||||| ||||| ||||    
T  29396836 ttttttttgactaaagcgacactcattttgaaatggagggagta 29396879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 27 - 155
Target Start/End: Complemental strand, 38926703 - 38926576
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||| |||| |||||||||||||||||||||           ||||||||||||||| |||||||||||||||||||||| |||||||    
T  38926703 ctttggaagtagtgtaacatagtattaattgaagggtacaattgaaaaaaagaagttattattgcattgaaaactgaaagtgacattcattttaaaacaa 38926604  T
Q  126 acttttttggctaaaacgacactcattttg 155  Q
      |||||| |||||||||||||||||||||    
T  38926603 --tttttttgctaaaacgacactcattttg 38926576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 162
Target Start/End: Complemental strand, 13562091 - 13561954
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||| ||||| ||||||||||||||||||||           |||||||||||||| |||||||||||||||||| ||||  ||||||    
T  13562091 ctttggaagtagtgtaacataacattaattgaagggtacaattgaaaagaaaaagttattattgcattagaaactgaaagtgacatttattttgaaacaa 13561992  T
Q  126 actt-ttttggctaaaacgacactcattttgaaacgga 162  Q
    | || |||||||||||| ||||||||||||||||||||    
T  13561991 atttattttggctaaaatgacactcattttgaaacgga 13561954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 43427397 - 43427475
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaa 158  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||| ||||||| ||||| |||||||||||||||||    
T  43427397 gttattattgcattggaaactgaaagtgacattcattttgaaacaaatttttttgtctaaagcgacactcattttgaaa 43427475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 29808909 - 29808766
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||| ||||||||||| |||||||||| |||           ||||| ||||||||| |||||||||||||||||||||| |||||||    
T  29808909 ctttggaagtagtgtaacataatattaagtgaagggtacgattgaaaagaaaaagttatgattgcattgaaaactgaaagtgacattcattttaaaacaa 29808810  T
Q  126 acttttttggctaaaacgacactcattttgaaacggaggaagtaaa 171  Q
      |||||||  |||||||||||| ||||||||||||||| ||||||    
T  29808809 --ttttttgaataaaacgacacttattttgaaacggagggagtaaa 29808766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 34546442 - 34546529
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||||||| ||||||||||||||||||  ||||||  |||||||| |||||||||||||||||||||||||||| ||||    
T  34546442 ttattattgcattggaaattgaaagtgacattcattttgaaacaat-ttttttggttaaaacgacactcattttgaaacggagggagta 34546529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 36178019 - 36177939
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacg 160  Q
    |||||||||||||||||||| |||||||||||||||||  ||||||  |||||| ||||||||||||||||||||||||||    
T  36178019 gttattattgcattggaaacggaaagtgacattcattttgaaacaatttttttttgctaaaacgacactcattttgaaacg 36177939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 80 - 163
Target Start/End: Original strand, 12394031 - 12394114
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggag 163  Q
    |||||||||||||| |||||||||||| ||||||||||  ||||||  ||||||| ||||||||||||||||||||||||||||    
T  12394031 gttattattgcattagaaactgaaagtaacattcattttgaaacaattttttttgcctaaaacgacactcattttgaaacggag 12394114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 169
Target Start/End: Original strand, 441287 - 441431
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||| ||||| |||| |||||||||||||||||||||           ||||||||||||||| |||| |||||||||||||||||  ||||||    
T  441287 ctttggaagtggtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattgaaaacagaaagtgacattcattttgaaacaa 441386  T
Q  126 actttt-ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
      |||| ||||||||||||||||| ||||||||||||||| ||||    
T  441387 tttttttttggctaaaacgacacttattttgaaacggagggagta 441431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 18719542 - 18719616
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcatttt 154  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||  |||||||||||||| ||||||||||||    
T  18719542 gttattattgcattgaaaactgaaagtgacattcatttcaaaacaattttttttggctaaaatgacactcatttt 18719616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 17703062 - 17702973
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||| ||| |||||||||||||||||| |||||||| | |||| | |||| |||||||||||||||||||||| |||||    
T  17703062 gttattattgcattgaaaattgaaagtgacattcattttaaaacaaattatttttgttaaagcgacactcattttgaaacggagaaagta 17702973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 27 - 169
Target Start/End: Complemental strand, 35799298 - 35799157
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnngttattattgcattggaaactgaaagtgacattcatttaaaaacaaa 126  Q
    ||||| ||||||||| ||||||||||||||| |||||||||||          ||||||||||||||||||||||||||||||||| ||||  ||||||     
T  35799298 ctttgaaagtagtgt-gcataatattaattggagggtacaattgaaaaaaaaagttattattgcattggaaactgaaagtgacatttattttgaaacaat 35799200  T
Q  127 cttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
     |||||| ||||||| |||| ||||||| |||| |||| ||||    
T  35799199 ttttttttgctaaaatgacattcattttaaaacagagggagta 35799157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 27964480 - 27964572
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttt---tggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||| | |||||   | |||||||||||||||||||||||||||||| ||||    
T  27964480 gttattattgcattggaaactaaaagtgacattcatttcgaaacatattttttttgttgctaaaacgacactcattttgaaacggagggagta 27964572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 5717555 - 5717475
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |  |||||| |||||| ||||||||||||| |||||||    
T  5717555 ttattattgcattggaaactgaaagtgacattcattttaaaac-atttttttttgctaaagcgacactcattttaaaacgga 5717475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 162
Target Start/End: Original strand, 6220461 - 6220596
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaaa 126  Q
    ||||||||||||||| |||||||||||||||| |||||| ||           ||||||||||||||||||||| |||||||||||||||| |||||||     
T  6220461 tttggaagtagtgtaacataatattaattgaaaggtacagttgaaaagaaaaagttattattgcattggaaactaaaagtgacattcattttaaaacaat 6220560  T
Q  127 cttttttggctaaaacgacactcattttgaaacgga 162  Q
     |||||  | ||||||||||||| |||| |||||||    
T  6220561 ttttttgagttaaaacgacactcgttttaaaacgga 6220596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 80 - 171
Target Start/End: Complemental strand, 16792526 - 16792437
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaa 171  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||  |||||| |||||| ||||||||||||| ||||||| | ||||||    
T  16792526 gttattattgcattggaaactcaaagtgacattcattttgaaacaa--tttttttgctaaagcgacactcattttaaaacggatggagtaaa 16792437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 80 - 164
Target Start/End: Complemental strand, 43971547 - 43971463
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggagg 164  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||  |||||| ||  ||||| |||||||||| |||||||||    
T  43971547 gttattattgcattggaaactgaaagtgacattcattttgaaacaatttttttttgcagaaacggcactcattttaaaacggagg 43971463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 164
Target Start/End: Original strand, 4051815 - 4051898
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggagg 164  Q
    |||||||||||||||||||||||||||||||||||||  ||||||  ||||||| |||||  |||| ||||||| |||||||||    
T  4051815 ttattattgcattggaaactgaaagtgacattcattttgaaacaattttttttgactaaagtgacaatcattttaaaacggagg 4051898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 8789536 - 8789625
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||| |||||||||| |||| || |||||||| |||||||  |||||| |||||||| | | ||||||||||||||||||||||    
T  8789536 gttattattgtattggaaactaaaagcgatattcattttaaaacaatttttttttgctaaaacaatattcattttgaaacggaggaagta 8789625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 17695935 - 17696023
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||  ||||||||||||||||||||| ||||||  ||||||  ||||||||||||| ||||||||||||||||||| ||| ||||    
T  17695935 gttattatcacattggaaactgaaagtgacactcattttgaaacaat-ttttttggctaaagcgacactcattttgaaacgaagggagta 17696023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 154
Target Start/End: Complemental strand, 30855200 - 30855074
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnngttattattgcattggaaactgaaagtgacattcatttaaaaacaaac 127  Q
    ||||||||||||||| |||| |||||||| || |||||||||           |||||||||||||||||||||| ||||||||||||||  |||| |      
T  30855200 tttggaagtagtgtaacatagtattaattaaatggtacaattgaaaagaaaaattattattgcattggaaactgagagtgacattcattttgaaactatt 30855101  T
Q  128 ttttttggctaaaacgacactcatttt 154  Q
    ||||||  |||||||||||||||||||    
T  30855100 tttttttactaaaacgacactcatttt 30855074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 43388788 - 43388855
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||| |||||||||||  ||||||| |||||||||||||| |||||||||||||||||||||| ||||    
T  43388788 aaagcgacattcattttgaaacaaatttttttggctaaaatgacactcattttgaaacggagggagta 43388855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 4469544 - 4469463
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||| |||| ||||||||||||| |||||||| |||||||  |||||| | |||||||||| |||||||||||||||    
T  4469544 gttattattgtattgaaaactgaaagtgaaattcattttaaaacaatgtttttt-gttaaaacgacattcattttgaaacgga 4469463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 170
Target Start/End: Original strand, 22620444 - 22620534
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    |||||||||||||||||||||||||| |||| ||||||  ||||||  || ||| |||||| | ||||||||||| ||||||||| |||||    
T  22620444 gttattattgcattggaaactgaaagcgacactcattttgaaacaactttattttgctaaagcaacactcattttaaaacggagggagtaa 22620534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 25383594 - 25383675
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||||||||||||| | |||||||||| |||||||  |||||| ||||||| |||||| ||||| |||||||    
T  25383594 gttattattgcattggaaactgaaaataacattcattttaaaacaattttttttagctaaaatgacact-attttaaaacgga 25383675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 8540081 - 8539992
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||| |||||||||||| || ||||||||| |||||||  ||||||  ||||||| ||||||||||| ||||| ||| ||||    
T  8540081 gttattattgcactggaaactgaaaatgtcattcattttaaaacaatttttttttactaaaacaacactcattttaaaacgaagggagta 8539992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 45301808 - 45301763
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  45301808 gttattattgcattggaaactgaaagtgacattcattttaaaacaa 45301763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 777813 - 777733
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacg 160  Q
    |||||||||||||| |||| ||||| |||||||||||| |||||||  | |||||||||||| |||||||| ||| |||||    
T  777813 gttattattgcattagaaattgaaaatgacattcattttaaaacaatttgttttggctaaaatgacactcactttaaaacg 777733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 6247739 - 6247675
Alignment:
Q  105 gtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||| |||||||  ||||||||| ||||||||||||||||| ||||||||| ||||    
T  6247739 gtgacattcattttaaaacaattttttttggcgaaaacgacactcattttaaaacggagggagta 6247675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 81 - 160
Target Start/End: Original strand, 12566091 - 12566171
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaa-acttttttggctaaaacgacactcattttgaaacg 160  Q
    |||||||||||||||||||||||||||||||||||||  ||||||   |||||| | ||||| |||||||||||| |||||    
T  12566091 ttattattgcattggaaactgaaagtgacattcattttgaaacaattttttttttgttaaaatgacactcattttaaaacg 12566171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 4536595 - 4536528
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||  ||||||  |||||||||||||  |||||||||||||||||||||| ||||    
T  4536595 aaagtgacattcattttgaaacaattttttttggctaaagtgacactcattttgaaacggagggagta 4536528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 11188602 - 11188682
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||| |||||||| ||||||||||||||||||||||  ||| ||  |||||| ||||||| |||||||||||| |||||||    
T  11188602 gttattgttgcattgaaaactgaaagtgacattcattttgaaataa--tttttttgctaaaatgacactcattttaaaacgga 11188682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 24775210 - 24775143
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||| |||||| |||||||| |||||||||| ||| |||||||||| ||||||||||| ||||    
T  24775210 aaagtgacaatcattttaaaacaaatttttttggctcaaatgacactcattatgaaacggagggagta 24775143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 81 - 163
Target Start/End: Original strand, 16807628 - 16807709
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggag 163  Q
    |||||||||||||||||||| ||||||||||| ||||  |||| || ||||||   |||||||||||||||||| ||||||||    
T  16807628 ttattattgcattggaaacttaaagtgacatttattttgaaac-aattttttttattaaaacgacactcattttaaaacggag 16807709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 81 - 163
Target Start/End: Original strand, 16846909 - 16846990
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggag 163  Q
    |||||||||||||||||||| ||||||||||| ||||  |||| || ||||||   |||||||||||||||||| ||||||||    
T  16846909 ttattattgcattggaaacttaaagtgacatttattttgaaac-aattttttttattaaaacgacactcattttaaaacggag 16846990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 32228121 - 32228202
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||  ||||  |||||||||||||||| ||||| || || ||| |||||||||||||||||||| |||||||    
T  32228121 gttattattgcatttaaaaccaaaagtgacattcattttaaaac-aatttattttgctaaaacgacactcattttaaaacgga 32228202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 34035865 - 34035930
Alignment:
Q  88 tgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcatttt 154  Q
    ||||||| |||||||||||||||||||||| ||||  || |||||||||||||||||| ||||||||    
T  34035865 tgcattgaaaactgaaagtgacattcattttaaaa-taatttttttggctaaaacgactctcatttt 34035930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 38809629 - 38809567
Alignment:
Q  107 gacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||  ||||||  ||||||||||||||||||||||||||||||| ||||| ||||    
T  38809629 gacattcattttgaaacaattttttttggctaaaacgacactcattttgaaatggagggagta 38809567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 42004988 - 42004946
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaatt 69  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  42004988 ctttggaagtagtgtaacataatattaattgaagggtacaatt 42004946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 8774099 - 8774010
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||| |||||||||| |||| || ||||||||  ||||||  |||||| |||||||| | | ||||||||||||||||| ||||    
T  8774099 gttattattgtattggaaactaaaagcgatattcatttttaaacaatttttttttgctaaaacaatattcattttgaaacggaggtagta 8774010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 18579209 - 18579125
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaa-actttt--ttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||||||| ||||||||||||||||||||||  ||||||  |||||  |||| |||||||||||| ||||| |||||||    
T  18579209 ttattattgcattgaaaactgaaagtgacattcattttgaaacaattctttttgttggttaaaacgacacttattttaaaacgga 18579125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 32254634 - 32254554
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||| |||||||||||||||||||| |||||||  ||||||  || ||| ||||||| |||||||||||| |||||||    
T  32254634 ttattatttcattggaaactgaaagtgac-ttcattttgaaacaattttattttgctaaaatgacactcattttaaaacgga 32254554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 36685851 - 36685923
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcatttt 154  Q
    ||||||||| ||| |||| ||||||| |||||||||| |||||||| |||||||||||||||||| || |||||    
T  36685851 ttattattgtatttgaaattgaaagtaacattcattttaaaacaaa-ttttttggctaaaacgacgctgatttt 36685923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 7028925 - 7029002
Alignment:
Q  83 attattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||||||||| ||||| ||||||||||||  ||||||  |||||| | |||| ||||||||||||| |||||||    
T  7028925 attattgcattggaaagtgaaaatgacattcattttgaaacaa--tttttttgataaatcgacactcattttaaaacgga 7029002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 14285981 - 14285902
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacg 160  Q
    |||||||||| |||||||||||||| ||||||||||||  |||  || |||||||||||||| || ||||||||| |||||    
T  14285981 gttattattgtattggaaactgaaaatgacattcattttgaaa-taatttttttggctaaaatgatactcattttaaaacg 14285902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 33482341 - 33482429
Alignment:
Q  82 tattattgcattggaaactgaaagtgacattcatttaaaaacaa-acttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||| ||||| ||| | |||||||||||||||| ||||||| | |||||| ||||| |||||||||||||| ||| | ||||||||    
T  33482341 tattattacattgaaaaataaaagtgacattcattttaaaacaatatttttttagctaatacgacactcattttaaaaagaaggaagta 33482429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 10195617 - 10195537
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||| ||| | ||||| |||||||||| |||||||  |||||| | |||||| ||||||||||| |||||||    
T  10195617 gttattattgcattgaaaattaaaagtaacattcattttaaaacaa--tttttttgttaaaaccacactcattttaaaacgga 10195537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 10580989 - 10581055
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||| ||||||||  ||||||  ||||||||||||| ||||||||||||| ||||||||||||||    
T  10580989 aaagtgatattcattttgaaacaattttttttggctaaa-cgacactcattttaaaacggaggaagta 10581055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 34225794 - 34225728
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||  ||||||  ||||||||||||| ||||||||||||||||||| ||| ||||    
T  34225794 aaagtgacattcattttgaaacaat-ttttttggctaaagcgacactcattttgaaacgaagggagta 34225728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 84 - 159
Target Start/End: Original strand, 37038880 - 37038954
Alignment:
Q  84 ttattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaac 159  Q
    ||||||||||| |||||||||||||||||||||| ||||| || ||||| || ||||| || ||||||||| ||||    
T  37038880 ttattgcattgaaaactgaaagtgacattcattttaaaac-aattttttggggtaaaatgatactcattttaaaac 37038954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 441180 - 441138
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagtaaattt 174  Q
    ||||||||||||||||||||||||||||||||| |||| ||||    
T  441180 ttggctaaaacgacactcattttgaaacggagggagtatattt 441138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 169
Target Start/End: Complemental strand, 2459809 - 2459727
Alignment:
Q  87 ttgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||   |||| ||||||||||| |||||||  |||||| |||||| | ||||||||||| ||||||||| ||||    
T  2459809 ttgcattggaaatgtaaagcgacattcattttaaaacaatttttttttgctaaagcaacactcattttaaaacggagggagta 2459727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 155
Target Start/End: Original strand, 4288822 - 4288896
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttg 155  Q
    ||||||||||||| ||||||| |||||| ||||||||  ||||||  ||||||| ||||||||||| | ||||||    
T  4288822 ttattattgcattagaaactgtaagtgatattcattttgaaacaattttttttgactaaaacgacatttattttg 4288896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 4658344 - 4658423
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||| ||||| ||| |||||  |||||||||||  ||||||  ||||||||||||||||| | |||||||||||||||    
T  4658344 ttattattacattgaaaaatgaaaaagacattcattttgaaacaa--ttttttggctaaaacgataatcattttgaaacgga 4658423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 15083262 - 15083343
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaactttttt--ggctaaaacgacactcattttgaaac 159  Q
    ||||||||||||||||||||||||| | |||||| |||  ||||||  ||||||  | ||||||||||||| ||||||||||    
T  15083262 gttattattgcattggaaactgaaaataacattcttttcgaaacaatttttttttggactaaaacgacacttattttgaaac 15083343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 1298911 - 1298984
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaatttt 175  Q
    ||||||||||||||||  ||| ||  ||||||   |||| ||||||||||||||||||||||| ||||||||||    
T  1298911 aaagtgacattcattttgaaataatttttttttattaaagcgacactcattttgaaacggagggagtaaatttt 1298984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 9366230 - 9366302
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcatttt 154  Q
    |||||||| ||||| ||||| ||||||||||| |||| ||||| || |||||| |||||||||||||| |||||    
T  9366230 ttattatttcattgaaaacttaaagtgacatttattttaaaac-aattttttttgctaaaacgacacttatttt 9366302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 14698033 - 14697976
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaac 159  Q
    |||| |||||||||||  ||||||  |||||| |||||||||||||||||||||||||    
T  14698033 aaagcgacattcattttgaaacaatttttttttgctaaaacgacactcattttgaaac 14697976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 28072610 - 28072565
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||| |||| |||||||||||||||||||||| |||||||    
T  28072610 gttattattgtattgaaaactgaaagtgacattcattttaaaacaa 28072565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 29411739 - 29411694
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||||||||||||| ||||| |||||||||||||||| |||||||    
T  29411739 gttattattgcattgaaaactaaaagtgacattcattttaaaacaa 29411694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 35046561 - 35046516
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||||||||||||||||| |||||||||||||||| | |||||||    
T  35046561 gttattattgcattggaaattgaaagtgacattcatcttaaaacaa 35046516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 7042299 - 7042376
Alignment:
Q  83 attattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||| || ||||| ||||||||||||  ||||||  |||||| | ||||||| |||||||||| |||||||    
T  7042299 attattgcattgggaagtgaaaatgacattcattttgaaacaa--tttttttgataaaacggcactcattttaaaacgga 7042376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 7874754 - 7874832
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacg 160  Q
    ||||||||||||||||||||  ||||||||||| |||| |||| ||  ||||| || |||||||||||||||||| |||||    
T  7874754 gttattattgcattggaaaca-aaagtgacattaattttaaaataatttttttagg-taaaacgacactcattttaaaacg 7874832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 43344355 - 43344418
Alignment:
Q  105 gtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||  ||||||  ||||||| |||||| ||||||||||||||||||||| |||||    
T  43344355 gtgacattcattttgaaacaattttttttg-ctaaaatgacactcattttgaaacggagtaagta 43344418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 171
Target Start/End: Original strand, 12342297 - 12342336
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagtaaa 171  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  12342297 ttggctaaaacgacactcattttaaaacggagggagtaaa 12342336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 169
Target Start/End: Complemental strand, 37724280 - 37724201
Alignment:
Q  90 cattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||| ||| ||||| ||||||| ||||  ||||||| | |||| |||||| ||||||||||||| ||||||||| ||||    
T  37724280 cattgaaaagtgaaaatgacatttattttgaaacaaattatttttgctaaagcgacactcattttaaaacggagggagta 37724201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 175
Target Start/End: Complemental strand, 43388606 - 43388563
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagtaaatttt 175  Q
    ||||||||| ||||||||||||||||||||||| |||| |||||    
T  43388606 ttggctaaagcgacactcattttgaaacggagggagtacatttt 43388563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 170
Target Start/End: Complemental strand, 29396629 - 29396591
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  29396629 ttggctaaaacgacactcattttgaaacagagggagtaa 29396591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 39866789 - 39866863
Alignment:
Q  87 ttgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgg 161  Q
    ||||||||||||   |||| ||||||||||| |||| ||  |||||| |||||| ||||||| ||||||||||||    
T  39866789 ttgcattggaaatgtaaagcgacattcattttaaaataatgtttttttgctaaagcgacacttattttgaaacgg 39866863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 42743126 - 42743084
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaatt 69  Q
    ||||| |||||||||| |||||||||||||||||| |||||||    
T  42743126 ctttgaaagtagtgtaacataatattaattgaaggatacaatt 42743084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 1298725 - 1298692
Alignment:
Q  136 ctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||| ||||||||||||||||||||||||||||    
T  1298725 ctaaagcgacactcattttgaaacggaggaagta 1298692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 1423287 - 1423246
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaatt 69  Q
    ||||||||||||||| |||| |||||||||||||||| ||||    
T  1423287 tttggaagtagtgtaacatactattaattgaagggtataatt 1423246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 4133226 - 4133263
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  4133226 ttggctaaagcgacactcattttgaaacggagggagta 4133263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 14286127 - 14286160
Alignment:
Q  136 ctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||| ||||||||||||||    
T  14286127 ctaaaacgacactcattttaaaacggaggaagta 14286160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 14833845 - 14833890
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||| |||||||| ||| |||||||||||||||||| |||||||    
T  14833845 gttattgttgcattgaaaattgaaagtgacattcattttaaaacaa 14833890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 16463142 - 16463179
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcattt 117  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  16463142 gttattattgcattgaaaactgaaagtgacatttattt 16463179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 16807570 - 16807615
Alignment:
Q  24 attctttggaagtagtgtagcataatattaattgaagggtacaatt 69  Q
    ||||||||||||| ||||| |||  |||||||||||||||||||||    
T  16807570 attctttggaagtggtgtaccattgtattaattgaagggtacaatt 16807615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 16846851 - 16846896
Alignment:
Q  24 attctttggaagtagtgtagcataatattaattgaagggtacaatt 69  Q
    ||||||||||||| ||||| |||  |||||||||||||||||||||    
T  16846851 attctttggaagtggtgtaccattgtattaattgaagggtacaatt 16846896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 22620290 - 22620257
Alignment:
Q  136 ctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||||||| ||||||||||    
T  22620290 ctaaaacgacactcattttgaaatggaggaagta 22620257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 27986075 - 27986034
Alignment:
Q  84 ttattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||| |||| |||||||||||||||||||||| |||||||    
T  27986075 ttattgtattgaaaactgaaagtgacattcattttaaaacaa 27986034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 40608714 - 40608750
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcattt 117  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  40608714 gttattattgcattg-aaactgaaagtgacattcattt 40608750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 43427244 - 43427211
Alignment:
Q  136 ctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||||||||||||||||| |||||    
T  43427244 ctaaaacgacactcattttgaaacggagaaagta 43427211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 776016 - 776075
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||| |||||||||||  ||||||  ||||||| ||||| |||||||||||||||||||||    
T  776016 aaagcgacattcattttgaaacaattttttttg-ctaaagcgacactcattttgaaacgga 776075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 4840858 - 4840917
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||||   |||||  ||||||  |||||||||||||||||||||||||||    
T  4840858 aaagtgacattcattttggaacaattttttttt-ctaaaacgacactcattttgaaacgga 4840917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 14378355 - 14378414
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||||||||| |||| |   ||||||| ||||| |||||||||||||||||||||    
T  14378355 aaagtgacattcattttaaaatatttttttttg-ctaaagcgacactcattttgaaacgga 14378414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 18374895 - 18374963
Alignment:
Q  102 aaagtgacattcatttaaaaacaaactttt-ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||  ||||||  |||| || |||||| ||| ||||||||||||||||||| ||||    
T  18374895 aaagtgacattcattttcaaacaattttttgtttgctaaagcgaaactcattttgaaacggagggagta 18374963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 25332583 - 25332523
Alignment:
Q  111 ttcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaa 171  Q
    |||||||  ||||||| |||||| | |||| ||||| |||||||||||| |||||||||||    
T  25332583 ttcattttgaaacaaattttttttgttaaagcgacaatcattttgaaacagaggaagtaaa 25332523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 29795321 - 29795381
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||||  |||||||  ||||||||||||  |||| ||||||| |||||||    
T  29795321 aaagtgacattcattttgaaacaaatatttttggctaaagtgacattcattttaaaacgga 29795381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 33093389 - 33093321
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||||||||||||  ||||||| |||||| |  |||  |||||||||||| ||||||||| |||||    
T  33093389 aaagtgacattcattttgaaacaaatttttttagtcaaagagacactcattttaaaacggagggagtaa 33093321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 36106515 - 36106582
Alignment:
Q  86 attgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcatttt 154  Q
    |||||||||||||   |||||||||||||||| ||||| || |||||| |||||||| | |||||||||    
T  36106515 attgcattggaaaacaaaagtgacattcattttaaaac-aattttttttgctaaaacaatactcatttt 36106582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 43480999 - 43481063
Alignment:
Q  98 actgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||| ||||| ||||||  |||||||  |||||| |||||||||||| ||||||||| ||||    
T  43480999 actgaaaatgacagtcattttgaaacaaatatttttgcctaaaacgacacacattttgaagcgga 43481063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 5e-29; HSPs: 81)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 32807046 - 32807135
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||  ||||| ||||||||||||||||||||||||||||||| ||||    
T  32807046 gttattattgcattggaaactgaaagtgacattcattttgaaacaatttttttaggctaaaacgacactcattttgaaacggagggagta 32807135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 27 - 169
Target Start/End: Original strand, 48025308 - 48025451
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||| |||| |||||||||||||||||||||           |||||||||||||||||||| |||||||||||||||||  ||||||    
T  48025308 ctttggaagtagtgtaacatagtattaattgaagggtacaattgaaacgaaaaagttattattgcattggaaaccgaaagtgacattcattttgaaacaa 48025407  T
Q  126 acttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
      |||||| |||||||||||||||||||| ||||||||| ||||    
T  48025408 tttttttttgctaaaacgacactcattttaaaacggagggagta 48025451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 27 - 162
Target Start/End: Complemental strand, 15823131 - 15822995
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||| |||||||||| |||| |||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||| |||||||    
T  15823131 ctttgaaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttaaaacaa 15823032  T
Q  126 acttttttggctaaaacgacactcattttgaaacgga 162  Q
    | | ||||| |||||||||| |||||||| |||||||    
T  15823031 attcttttgactaaaacgactctcattttaaaacgga 15822995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 80 - 170
Target Start/End: Complemental strand, 29567939 - 29567849
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||  |||||| |||||||||||||| ||||||||||||||| |||||    
T  29567939 gttattattgcattggaaactgaaagtgacattcattttgaaacaacttttttttgctaaaacgacactaattttgaaacggagggagtaa 29567849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 50249353 - 50249264
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||| |||| |||| ||||    
T  50249353 gttattattgcattggaaactgaaagtgacattcattttgaaacaaatttttttggctaaagcgacactcattttaaaacagagggagta 50249264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 27 - 162
Target Start/End: Complemental strand, 9915540 - 9915404
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnngtt-attattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||| |||||||||| |||| |||||||||||||||||||||           || |||||||||||||||||||||| |||||||||||| |||||||    
T  9915540 ctttgcaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaatttattattgcattggaaactgaaaatgacattcattttaaaacaa 9915441  T
Q  126 acttttttggctaaaacgacactcattttgaaacgga 162  Q
    | |||| ||| ||||||||||||||||||| ||||||    
T  9915440 atttttatggttaaaacgacactcattttgtaacgga 9915404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 26755263 - 26755181
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||| || |||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||||||||||||||||    
T  26755263 gttattaatgtattggaaactgaaagtgacattcattttgaaacaattttttttggctaaaacgacactcattttgaaacgga 26755181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 80 - 166
Target Start/End: Complemental strand, 30292983 - 30292897
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaa 166  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||  |||||||| | |||||||||||||||| |||||||||||    
T  30292983 gttattattgcattggaaactgaaagtggcattcattttaaaacaattttttttggttgaaacgacactcattttaaaacggaggaa 30292897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 16757302 - 16757390
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||||||||||||||||||||| |||||  |||| |||||||||||||||||||||||||| ||||| ||||||| ||||    
T  16757302 gttattattgcattggaaactgaaagtgacatacattttgaaac-aacttttttggctaaaacgacactcactttgatacggagggagta 16757390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 34032189 - 34032277
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||||||||||||||||||||||||||  ||||||  |||||| |||||| |||||||||||||||| |||||| ||||    
T  34032189 ttattattgcattggaaactgaaagtgacattcattttgaaacaatttttttttgctaaagcgacactcattttgaagcggagggagta 34032277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 80 - 171
Target Start/End: Complemental strand, 46554841 - 46554752
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaa 171  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||||  |||||||| |||||||||||||||||| ||||||||| ||||||    
T  46554841 gttattattgcagtggaaactgaaggtgacattcattttaaaacaa--ttttttggttaaaacgacactcattttaaaacggagggagtaaa 46554752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 81 - 170
Target Start/End: Original strand, 38531406 - 38531494
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    |||||||||||||||||||||||| ||||||||||||  |||| || ||||||| |||||||||| |||||||||||||||||| |||||    
T  38531406 ttattattgcattggaaactgaaaatgacattcattttgaaac-aatttttttgactaaaacgacgctcattttgaaacggagggagtaa 38531494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 80 - 175
Target Start/End: Complemental strand, 25151858 - 25151764
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaatttt 175  Q
    |||||||||||||||||||| ||||||||||||||||| || ||||  ||||||  |||||||| |||||||||||||||||||| ||||| ||||    
T  25151858 gttattattgcattggaaaccgaaagtgacattcattt-aatacaatttttttttactaaaacgtcactcattttgaaacggagggagtaactttt 25151764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 31491798 - 31491968
Alignment:
Q  1 tgtttttcattaaagnnnnnnntattctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaac 99  Q
    |||||||||||||||       ||| ||||| |||||||||| |||| ||||||||||||| |||||||           ||||||||  ||||| |||     
T  31491798 tgtttttcattaaagaaaaaattatactttgaaagtagtgtaacatagtattaattgaaggatacaattgaaaagaaaaagttattatgacattgaaaat 31491897  T
Q  100 tgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||||||||||||||  ||||||  ||||||||||||||||||||| ||||||||||||||| |||||    
T  31491898 tgaaagtgacattcattttgaaacaattttttttggctaaaacgacactgattttgaaacggagggagtaa 31491968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 44258616 - 44258706
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaa--acttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    |||||| |||||| ||||||||||||||||||| ||| ||||    
T  44258616 ttattattgcattggaaactgaaagtgacattcattttaaaacaatttttttttttgctaaagcgacactcattttgaaacgaagggagta 44258706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 80 - 163
Target Start/End: Complemental strand, 15573650 - 15573565
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaactttttt--ggctaaaacgacactcattttgaaacggag 163  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||  ||||||  |||||||||||| |||||||||||||||||    
T  15573650 gttattattgcattgaaaactgaaagtgacattcattttgaaacaatttttttttgggctaaaacgacgctcattttgaaacggag 15573565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 5463618 - 5463530
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||| ||||||||||||||||||||||||||||||||  |||| || || ||| |||||||||||| ||||||||||||||||| ||||    
T  5463618 gttataattgcattggaaactgaaagtgacattcattttgaaac-aatttcttttgctaaaacgacattcattttgaaacggagggagta 5463530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 89 - 169
Target Start/End: Complemental strand, 7375323 - 7375243
Alignment:
Q  89 gcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||||||||||| | ||||  ||| ||  ||||||||||||||||||||||||||||||||||||| ||||    
T  7375323 gcattggaaactgaaagtgacaattattttgaaataattttttttggctaaaacgacactcattttgaaacggagggagta 7375243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 80 - 164
Target Start/End: Original strand, 14373521 - 14373605
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggagg 164  Q
    |||||| |||||||||||||||||| |||||||||||| |||| ||  |||||| |||||| ||||||||||||| |||||||||    
T  14373521 gttattgttgcattggaaactgaaaatgacattcattttaaaataattttttttagctaaagcgacactcattttaaaacggagg 14373605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 49468765 - 49468899
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||||||||||||||  ||| |||||||||||||||||||||           ||||||||||||||||||||||||||| ||||||||||  ||||||    
T  49468765 ctttggaagtagtgtaatatagtattaattgaagggtacaattgaaaagaaaatgttattattgcattggaaactgaaagttacattcattttgaaacaa 49468864  T
Q  126 acttttttggctaaaacgacactcattttgaaacg 160  Q
      ||||||   ||||||||| ||||||||||||||    
T  49468865 tttttttttattaaaacgacgctcattttgaaacg 49468899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 2459029 - 2458962
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||| |||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  2459029 aaagcgacattcattttgaaacaaatttttttggctaaaacgacactcattttgaaacggagggagta 2458962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 10842823 - 10842745
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaac 159  Q
    ||||||||||||||| ||||||||||||||||||||||  |||  || ||||||||||||||||||||||||||| ||||    
T  10842823 gttattattgcattgaaaactgaaagtgacattcattttgaaa-taatttttttggctaaaacgacactcattttaaaac 10842745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 34047343 - 34047426
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaa-acttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||   |||||| |||||||||||||||||||| |||||||    
T  34047343 gttattattgcattggaaactcaaagtgacattcattttgaaacaattttttttttgctaaaacgacactcattttaaaacgga 34047426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 12591190 - 12591272
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||| | ||||| |||||   ||||||||||| |||||||    
T  12591190 gttattattgcattggaaactaaaagtgacattcattttaaaacaaattattttgactaaagtaacactcattttaaaacgga 12591272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 80 - 170
Target Start/End: Complemental strand, 25487131 - 25487042
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||||||||||| |||||||||||||||||||||| ||||  |  ||||||||||||| |||| || ||||||||||||||| |||||    
T  25487131 gttattattgcattgaaaactgaaagtgacattcattttaaaa-tagtttttttggctaaagcgacgctaattttgaaacggagggagtaa 25487042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 27721001 - 27720920
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||  |||| ||||||||||||||||||||||  ||| ||| ||||||||||||| |||||||||||||||||||||    
T  27721001 gttattattatattgaaaactgaaagtgacattcatttttaaataaa-ttttttggctaaagcgacactcattttgaaacgga 27720920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 44557152 - 44557233
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||| ||||||  ||||| ||| ||||||||| |||||||    
T  44557152 gttattattgcattggagactgaaagtgacattcattttaaaacaaa-tttttttactaaagcgaaactcattttaaaacgga 44557233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 52125193 - 52125325
Alignment:
Q  30 tggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnng-ttattattgcattggaaactgaaagtgacattcatttaaaaacaaact 128  Q
    ||||||||||||| ||||||||||||||||||||||||||            |||||||||||||||||||||||| ||||||||||||  ||||||  |    
T  52125193 tggaagtagtgtaacataatattaattgaagggtacaattgagaataaaaaattattattgcattggaaactgaaattgacattcatttcgaaacaattt 52125292  T
Q  129 ttttt-ggctaaaacgacactcattttgaaacg 160  Q
    |||||  ||||||||||| |||||||| |||||    
T  52125293 tttttaagctaaaacgacgctcattttaaaacg 52125325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 169
Target Start/End: Original strand, 24611574 - 24611716
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||| |||| |||||||||||||||||||||           ||||||||| |||| |||||| ||||||||||||||||   |||||    
T  24611574 ctttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattacattagaaactaaaagtgacattcattt-tgaacaa 24611672  T
Q  126 acttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
      ||||||||||||||| |||||| |||||||| ||||| ||||    
T  24611673 ttttttttggctaaaacaacactctttttgaaatggagggagta 24611716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 26352189 - 26352262
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattt 153  Q
    ||||||||||||||| ||||| ||||||||||||||||  ||||||| | ||||||||||| ||||||||||||    
T  26352189 gttattattgcattgaaaactaaaagtgacattcattttgaaacaaattattttggctaaagcgacactcattt 26352262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 80 - 171
Target Start/End: Original strand, 18794650 - 18794741
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaa-acttttttggctaaaacgacactcattttgaaacggaggaagtaaa 171  Q
    |||||||||||||| |||||||||| ||||||| |||| ||||||| | |||||| |||||||||||| ||||||| ||||||||| ||||||    
T  18794650 gttattattgcattcgaaactgaaa-tgacatttattttaaaacaatattttttttgctaaaacgacaatcattttaaaacggagggagtaaa 18794741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 39477816 - 39477904
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||||||| | |||||||||| ||||| |||||||  || ||| |||||||| ||||||||||| ||||||| ||||||    
T  39477816 ttattattgcattggaaattaaaagtgacatccattttaaaacaattttattttgctaaaacaacactcattttaaaacggatgaagta 39477904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 27209032 - 27208954
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaac 159  Q
    |||||||||||||||||||| |||||||||||||||||  |||| || |||| ||||||||| |||||||||||| ||||    
T  27209032 gttattattgcattggaaaccgaaagtgacattcatttcgaaac-aatttttctggctaaaatgacactcattttaaaac 27208954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 80 - 171
Target Start/End: Complemental strand, 46046016 - 46045926
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaa 171  Q
    ||||||||||||| | ||||||||||||||||||||||  |||| || ||||||  ||||||||||||||||||| |||||| || ||||||    
T  46046016 gttattattgcatcgaaaactgaaagtgacattcattttgaaac-aattttttttactaaaacgacactcattttaaaacggggggagtaaa 46045926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 672398 - 672460
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggagg 164  Q
    |||||||||||||||| |||||||| |||||||||||||  |||||||||||| |||||||||    
T  672398 aaagtgacattcattttaaaacaaatttttttggctaaagtgacactcattttaaaacggagg 672460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 158
Target Start/End: Complemental strand, 31798632 - 31798555
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaa 158  Q
    |||||||||| || |||||||||||||||| |||||||  ||||||  ||||||||||||||||||||||| |||||||    
T  31798632 gttattattgtatcggaaactgaaagtgacgttcattttgaaacaat-ttttttggctaaaacgacactcactttgaaa 31798555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 169
Target Start/End: Complemental strand, 44108696 - 44108552
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||||||||| |||| |||| |||||||||||||||||||||           |||||||||| |||||||||||||||||||||| |||| |||||||    
T  44108696 ctttggaagtattgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgtattggaaactgaaagtgacatttattttaaaacaa 44108597  T
Q  126 -acttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
       ||||||  ||||||| | ||||||||||||| ||||| ||||    
T  44108596 ttttttttttactaaaacaatactcattttgaaatggagggagta 44108552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 13408373 - 13408462
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||| ||||||||||| | |||||||| |||||||  | |||| | |||||||||||||||||| ||||| ||| ||||    
T  13408373 gttattattgcattgaaaactgaaagtaaaattcattttaaaacaatttgtttttggtaaaacgacactcattttaaaacgaagggagta 13408462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 50094326 - 50094235
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcattt 117  Q
    ||||| |||||||||| |||| |||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||    
T  50094326 ctttgtaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattt 50094235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 12002263 - 12002199
Alignment:
Q  106 tgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    |||||||||||| |||||||  |||||| |||||||||||||||||||| ||||||||| |||||    
T  12002263 tgacattcattttaaaacaattttttttagctaaaacgacactcattttaaaacggagggagtaa 12002199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 81 - 121
Target Start/End: Original strand, 14593429 - 14593469
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaa 121  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14593429 ttattattgcattggaaactgaaagtgacattcatttaaaa 14593469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 1740749 - 1740828
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaa-acttttttggctaaaacgacactcattttgaaa 158  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||   ||||||  |||||||||||||  ||||||||    
T  1740749 gttattatttcattggaaactgaaagtgacattcattttaaaacaattttttttttactaaaacgacacttgttttgaaa 1740828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 170
Target Start/End: Complemental strand, 24884458 - 24884365
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaa---acttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||||||||||||||| ||||||||||||| |||| |||| ||     |||||| |||||||||||| ||||||| ||||||||| |||||    
T  24884458 gttattattgcattggaaattgaaagtgacatttattttaaaataattttttttttttgctaaaacgacattcattttaaaacggagggagtaa 24884365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 24483431 - 24483358
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcatttt 154  Q
    |||||||||| |||||||||||||| ||||||||||||  |||| || ||||||  |||||||||||||||||||    
T  24483431 gttattattgtattggaaactgaaactgacattcattttgaaac-aatttttttttctaaaacgacactcatttt 24483358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 2610939 - 2611019
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||| |||| |||||||||||   |||||||| |||||||  ||||||| ||||||||||||||||||| |||||||    
T  2610939 ttattattgtattgaaaactgaaagtcgtattcatttcaaaacaattttttttg-ctaaaacgacactcattttaaaacgga 2611019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 164
Target Start/End: Original strand, 43358308 - 43358393
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttg-gctaaaacgacactcattttgaaacggagg 164  Q
    ||||||||||||||| ||| ||||||||| |||||| |  ||||||  ||||||  |||||||||||||||||||| |||||||||    
T  43358308 gttattattgcattgaaaagtgaaagtgatattcatattgaaacaattttttttttgctaaaacgacactcattttaaaacggagg 43358393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 49426524 - 49426609
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||| |||||||  |||||||| ||||  |||||   ||||||| ||||||||||| ||||||||||||||||||||||    
T  49426524 ttattattgcattgaaaactga--gtgacatttattttgaaacatttttttttg-ctaaaacgacattcattttgaaacggaggaagta 49426609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 26595178 - 26595230
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaactttttt 133  Q
    |||||||||||||| |||||||||||||||||||||| |||||| | ||||||    
T  26595178 ttattattgcattgtaaactgaaagtgacattcattttaaaacatattttttt 26595230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 125
Target Start/End: Complemental strand, 38947696 - 38947653
Alignment:
Q  82 tattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||||||||||||| |||||||||||||||||||| |||||||    
T  38947696 tattattgcattggatactgaaagtgacattcattttaaaacaa 38947653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 43929717 - 43929638
Alignment:
Q  91 attggaaactgaaagtgacattcatttaaaaacaaacttttttg-gctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||| ||||||||||||  ||||||  ||||||  ||||||  |||||||||||||||||||||| ||||    
T  43929717 attggaaactgaaattgacattcattttgaaacaattttttttttgctaaagtgacactcattttgaaacggagggagta 43929638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 28200361 - 28200423
Alignment:
Q  107 gacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||  ||||||  ||||||| ||||||||||||||||||| ||||||||| ||||    
T  28200361 gacattcattttgaaacaattttttttgactaaaacgacactcattttaaaacggagggagta 28200423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 38132299 - 38132360
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggagg 164  Q
    ||||||||||||||||  ||||||  ||||||||||||| ||||||||||||||||| |||||    
T  38132299 aaagtgacattcattttgaaacaat-ttttttggctaaagcgacactcattttgaaatggagg 38132360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 40717405 - 40717487
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattca-tttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||||||| ||||||||||||||||||| ||| || | |   |||||| |||||||| ||||||||||| |||||||    
T  40717405 ttattattgcattgaaaactgaaagtgacattcattttgaagaaatttttttttagctaaaacaacactcattttaaaacgga 40717487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 170
Target Start/End: Complemental strand, 48259812 - 48259774
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  48259812 ttggctaaaacgacactcattttgaaacggagggagtaa 48259774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 84625 - 84698
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaatttt 175  Q
    |||||||||||||||| |||||||  |||||| ||||||  |||||||| ||| ||||||||| ||||| ||||    
T  84625 aaagtgacattcattttaaaacaatttttttttgctaaagtgacactcaatttaaaacggagggagtaagtttt 84698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 5317708 - 5317769
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggag 163  Q
    ||||||||||||||||  ||||||| ||| |||| ||||  |||||||||||||||||||||    
T  5317708 aaagtgacattcattttgaaacaaattttgttggataaagtgacactcattttgaaacggag 5317769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 15573707 - 15573666
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaatt 69  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  15573707 tttggaagtagtctaacataatattaattgaagggtacaatt 15573666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 17806506 - 17806567
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggag 163  Q
    |||| |||| |||||| |||||||  |||||||||||||  |||||||||||||||||||||    
T  17806506 aaagcgacactcattttaaaacaattttttttggctaaagtgacactcattttgaaacggag 17806567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 43759428 - 43759387
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaatt 69  Q
    ||||||||||||||| |||| |||||||||||||||||||||    
T  43759428 tttggaagtagtgtaacatattattaattgaagggtacaatt 43759387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 52024343 - 52024423
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||||||| ||||||||| | ||||| ||||  ||||||  ||||||| ||||||||||| || ||||||||||||    
T  52024343 ttattattgcattgaaaactgaaaataacatttattttgaaacaat-ttttttgactaaaacgacattctttttgaaacgga 52024423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 48009218 - 48009258
Alignment:
Q  136 ctaaaacgacactcattttgaaacggaggaagtaaatttta 176  Q
    ||||||||||||||||||||||||||||||| || ||||||    
T  48009218 ctaaaacgacactcattttgaaacggaggaaatatatttta 48009258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 24041132 - 24041195
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggagga 165  Q
    ||||||||||||||||  ||||||  |||||| |||||| |||| ||||||||||||| |||||    
T  24041132 aaagtgacattcattttgaaacaatttttttttgctaaagcgacgctcattttgaaactgagga 24041195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 115
Target Start/End: Complemental strand, 34110570 - 34110535
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcat 115  Q
    ||||||||||||||||||||||||||| ||||||||    
T  34110570 gttattattgcattggaaactgaaagtaacattcat 34110535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 148
Target Start/End: Original strand, 35848041 - 35848111
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaa--acttttttggctaaaacgacact 148  Q
    ||||||||||||||| ||||||||||||||||||| ||  ||||||    ||||||| |||||||||||||    
T  35848041 gttattattgcattgtaaactgaaagtgacattcactttcaaacaattttttttttgactaaaacgacact 35848111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 175
Target Start/End: Complemental strand, 48319954 - 48319911
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagtaaatttt 175  Q
    ||||||||| ||||||||||||||||||||||| |||| |||||    
T  48319954 ttggctaaagcgacactcattttgaaacggaggtagtacatttt 48319911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 52066342 - 52066385
Alignment:
Q  26 tctttggaagtagtgtagcataatattaattgaagggtacaatt 69  Q
    |||||| ||||||||||  |||||||||||||||||||||||||    
T  52066342 tctttgaaagtagtgtaatataatattaattgaagggtacaatt 52066385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 169
Target Start/End: Original strand, 9915651 - 9915685
Alignment:
Q  135 gctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||||||||||||||||||| ||||    
T  9915651 gctaaaacgacactcattttgaaacggagggagta 9915685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 170
Target Start/End: Original strand, 15573817 - 15573855
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  15573817 ttggctaaaacgacattcattttgaaacgaaggaagtaa 15573855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 170
Target Start/End: Complemental strand, 28751357 - 28751319
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  28751357 ttggctaaaacgacactcattttgaaacagagggagtaa 28751319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 2459209 - 2459246
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  2459209 ttggctaaagcgacactcattttgaaacggagggagta 2459246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 4471352 - 4471319
Alignment:
Q  136 ctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||| ||||||||||||||||||||||||||||    
T  4471352 ctaaagcgacactcattttgaaacggaggaagta 4471319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 11134409 - 11134372
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||||||||||| ||||| ||||    
T  11134409 ttggctaaaacgacactcattttgaaatggagggagta 11134372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 11134620 - 11134661
Alignment:
Q  128 ttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||| ||||||||||||||||||||||||| |||| ||||    
T  11134620 ttttttagctaaaacgacactcattttgaaacagagggagta 11134661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 13408283 - 13408246
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  13408283 ttggctaaaacgacactcattttaaaacggagggagta 13408246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 15647192 - 15647265
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaatttt 175  Q
    ||||||||||||||||  ||||||  |||||| ||||||  |||||||||| ||||| ||||| ||||| ||||    
T  15647192 aaagtgacattcattttgaaacaatttttttttgctaaagtgacactcattatgaaatggagggagtaactttt 15647265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 161
Target Start/End: Complemental strand, 29296934 - 29296901
Alignment:
Q  128 ttttttggctaaaacgacactcattttgaaacgg 161  Q
    |||||| |||||||||||||||||||||||||||    
T  29296934 ttttttagctaaaacgacactcattttgaaacgg 29296901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 43105715 - 43105772
Alignment:
Q  105 gtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||| |||| ||| | |||||| ||||| |||||||| |||||||||||    
T  43105715 gtgacattcattttaaaataaattgttttggttaaaatgacactcactttgaaacgga 43105772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 44024559 - 44024498
Alignment:
Q  109 cattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    |||||||||  ||||||  |||||| |||||| ||||||||||||| ||||||||| |||||    
T  44024559 cattcattttgaaacaatttttttttgctaaagcgacactcattttaaaacggagggagtaa 44024498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 50591452 - 50591493
Alignment:
Q  128 ttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||| | ||||||||||||||||| ||||    
T  50591452 ttttttggctaaaacgatattcattttgaaacggagggagta 50591493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 164
Target Start/End: Original strand, 25487281 - 25487309
Alignment:
Q  136 ctaaaacgacactcattttgaaacggagg 164  Q
    |||||||||||||||||||||||||||||    
T  25487281 ctaaaacgacactcattttgaaacggagg 25487309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 117
Target Start/End: Original strand, 46271426 - 46271462
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcattt 117  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  46271426 ttattattccattggaaactgaaaatgacattcattt 46271462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 89)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 169
Target Start/End: Original strand, 33194084 - 33194226
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||||||||| |||| ||||||||||||||||||||||||||           ||||| |||||||||||||||||||||||||||||||| ||||| |    
T  33194084 ctttggaagtaatgtaacataatattaattgaagggtacaattaaaaataaaaagttatcattgcattggaaactgaaagtgacattcattttaaaac-a 33194182  T
Q  126 acttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    | |||||| |||||||||||||||||||| ||| ||||| ||||    
T  33194183 attttttttgctaaaacgacactcattttaaaatggagggagta 33194226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 80 - 163
Target Start/End: Original strand, 42571636 - 42571719
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggag 163  Q
    |||||||||||||||||||||| |||||||||||||||  ||||||  ||||||||||||| ||||||||||||||||||||||    
T  42571636 gttattattgcattggaaactgcaagtgacattcattttgaaacaattttttttggctaaagcgacactcattttgaaacggag 42571719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 80 - 170
Target Start/End: Original strand, 45213829 - 45213917
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||  ||||||  ||||||||||||||||||| |||||||||||||||    
T  45213829 gttattattgcattagaaactgaaagtgacattcattttaaaacaa--ttttttaactaaaacgacactcattttaaaacggaggaagtaa 45213917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 38016418 - 38016337
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||||||||||||||||||||||||||  |||| || || ||||||||||||||||||||||||||||||||    
T  38016418 gttattattgcattggaaactgaaagtgacattcattttgaaac-aatttctttggctaaaacgacactcattttgaaacgga 38016337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 27 - 162
Target Start/End: Original strand, 50088369 - 50088505
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||| |||||||||| |||| |||||||||||||||||||||           |||| |||||||||||||||| |||||||| ||||||| |||||||    
T  50088369 ctttgaaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttactattgcattggaaactaaaagtgacgttcattttaaaacaa 50088468  T
Q  126 acttttttggctaaaacgacactcattttgaaacgga 162  Q
      |||||| ||||||||||||||||||||||||||||    
T  50088469 tttttttttgctaaaacgacactcattttgaaacgga 50088505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 169
Target Start/End: Original strand, 3152860 - 3153001
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaaa 126  Q
    ||||||||||||||| |||| |||||||||||||||||||||           ||||||||||||||| ||||||||||||||||||||||  |||| ||    
T  3152860 tttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttgaaac-aa 3152958  T
Q  127 cttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
     |||||| ||||||| |||||||||||| ||||||||| ||||    
T  3152959 ttttttttgctaaaatgacactcattttaaaacggagggagta 3153001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 80 - 163
Target Start/End: Original strand, 50038278 - 50038361
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggag 163  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||  |||||| |||||| ||||||||||||| ||||||||    
T  50038278 gttattattgcattgaaaactgaaagtgacattcattttaaaacaatttttttttgctaaagcgacactcattttaaaacggag 50038361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 27 - 169
Target Start/End: Complemental strand, 30431217 - 30431075
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnng-ttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||||||||||||||  ||||||||||||||||| |||||||            |||||||||||||| ||||||||||||||||||||||  ||| ||    
T  30431217 ctttggaagtagtgtaatataatattaattgaaggttacaattgaaaagaaaaaattattattgcattgaaaactgaaagtgacattcattttgaaataa 30431118  T
Q  126 acttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
      |||||||||||||||||||||||||||||||| |||| ||||    
T  30431117 t-ttttttggctaaaacgacactcattttgaaacagagggagta 30431075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 28 - 162
Target Start/End: Complemental strand, 51398106 - 51397971
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaaa 126  Q
    ||||||||||||||| |||| |||||||||||||||||||||           ||||||||| ||||| ||||| ||||||||||| ||||  ||||||     
T  51398106 tttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattacattgaaaactaaaagtgacatttattttgaaacaat 51398007  T
Q  127 cttttttggctaaaacgacactcattttgaaacgga 162  Q
     ||||||||||||||||||||||||||| |||||||    
T  51398006 tttttttggctaaaacgacactcattttaaaacgga 51397971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 80 - 170
Target Start/End: Original strand, 32492288 - 32492375
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||||||||||| ||| ||||||||||||||||||  ||||||   |||||| ||||||||||||||||||||||||||||| |||||    
T  32492288 gttattattgcattgaaaattgaaagtgacattcattttgaaacaa---tttttgcctaaaacgacactcattttgaaacggagggagtaa 32492375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 80 - 171
Target Start/End: Complemental strand, 19115430 - 19115340
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaa 171  Q
    ||||||||||||||||||||| ||||||||||||||||  |||| || ||||||||||||| |||| |||||||| ||||||||| ||||||    
T  19115430 gttattattgcattggaaactcaaagtgacattcattttgaaac-aatttttttggctaaagcgacgctcattttaaaacggagggagtaaa 19115340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 53200787 - 53200866
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaac 159  Q
    ||||||||||||||| ||||| |||||||||||||||| |||||||  |||||| |||||||||||| ||||||||||||    
T  53200787 gttattattgcattgaaaactaaaagtgacattcattttaaaacaatttttttttgctaaaacgacattcattttgaaac 53200866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 2458050 - 2457969
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||| |||||||||||||||||||||||||||  |||| || |||||||||| |||||| |||||||||||||||||    
T  2458050 gttattattgtattggaaactgaaagtgacattcattttgaaac-aatttttttggcttaaacgatactcattttgaaacgga 2457969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 81 - 165
Target Start/End: Original strand, 30934917 - 30934998
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggagga 165  Q
    ||||||||||||||||||||||   |||||||||||| |||||||  |||||| |||||||||||||||||||||||| ||||||    
T  30934917 ttattattgcattggaaactga---tgacattcattttaaaacaattttttttagctaaaacgacactcattttgaaatggagga 30934998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 157
Target Start/End: Complemental strand, 36460903 - 36460774
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||||||||||| || |||||||||||||||||||| |||||           ||||||||||||||| ||||||||||||| ||||||||  |||||     
T  36460903 ctttggaagtagtataacataatattaattgaagggtgcaattgaaaagaaaaagttattattgcattgaaaactgaaagtgatattcattttgaaacat 36460804  T
Q  126 acttttttggctaaaacgacactcattttgaa 157  Q
      ||||||||||||||||||||||||||||||    
T  36460803 --ttttttggctaaaacgacactcattttgaa 36460774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 39356928 - 39356846
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||| ||||||||||||||||| |||| |||||||  ||||||  ||||||||| |||||||||||||||||    
T  39356928 gttattattgcattgaaaactgaaagtgacatttattttaaaacaattttttttaactaaaacgatactcattttgaaacgga 39356846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 50646217 - 50646299
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||||||||||||||||||||| ||||  ||||||  |||||| | |||||||||||||||||| |||||||    
T  50646217 gttattattgcattggaaactgaaagtgacatttattttgaaacaatttttttttgttaaaacgacactcattttaaaacgga 50646299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 31583542 - 31583623
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||| |||||||||||||||||||| |||| |||||||  ||||||  ||||||||||||||||||| |||||||    
T  31583542 ttattattgcactggaaactgaaagtgacattaattttaaaacaatttttttttactaaaacgacactcattttaaaacgga 31583623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 33024407 - 33024492
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggagga 165  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||  ||||||  ||||||||||||||||||| ||| ||||||    
T  33024407 gttattattgcattggaaactgaaagtaacattcattttaaaataatttttttttactaaaacgacactcattttaaaatggagga 33024492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 33 - 163
Target Start/End: Complemental strand, 41850481 - 41850350
Alignment:
Q  33 aagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaaactttt 131  Q
    |||||||||| ||||||||||||||||||||||||||           ||||||||||||||||||||| |||||| ||||||||| |||||||   |||    
T  41850481 aagtagtgtaacataatattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactaaaagtgtcattcattttaaaacaattattt 41850382  T
Q  132 ttggctaaaacgacactcattttgaaacggag 163  Q
    |||||||||| |||| ||||||| ||| ||||    
T  41850381 ttggctaaaatgacattcattttaaaatggag 41850350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 80 - 175
Target Start/End: Original strand, 23208398 - 23208490
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaatttt 175  Q
    ||||||||||  ||||||||||||||||||||||||||  ||||||  |||||| |||||||||||||||| ||||||||||||| |||| |||||    
T  23208398 gttattattg--ttggaaactgaaagtgacattcattttgaaacaat-ttttttagctaaaacgacactcaatttgaaacggagggagtacatttt 23208490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 85 - 169
Target Start/End: Original strand, 41287611 - 41287694
Alignment:
Q  85 tattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||| ||||||| |||||||||||||||||  ||||||  ||||||||||||||||||||| ||||||||||||||| ||||    
T  41287611 tattgcactggaaaccgaaagtgacattcattttgaaacaat-ttttttggctaaaacgacacttattttgaaacggagggagta 41287694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 44648532 - 44648600
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    |||||||||||||||| |||||||  |||||| |||||||||||||||||||||||||||||| |||||    
T  44648532 aaagtgacattcattttaaaacaatttttttttgctaaaacgacactcattttgaaacggagggagtaa 44648600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 51058267 - 51058339
Alignment:
Q  88 tgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacg 160  Q
    ||||||| ||||| |||||||||||||||| |||||||| ||||||||||||||||||||||| ||| |||||    
T  51058267 tgcattgaaaacttaaagtgacattcattttaaaacaaatttttttggctaaaacgacactcactttaaaacg 51058339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 163
Target Start/End: Complemental strand, 30315352 - 30315270
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggag 163  Q
    |||||| ||||||||||||| |||||||||||||||||  ||||||  |||||||||||||||||| |||| ||||||||||||    
T  30315352 gttattcttgcattggaaacggaaagtgacattcattttgaaacaattttttttggctaaaacgacgctca-tttgaaacggag 30315270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 38140993 - 38140913
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||||||||||||||||||||||||||  ||||  | |||||| ||||||||||||||| |||| |||||||    
T  38140993 gttattattgcattggaaactgaaagtgacattcattttgaaac--attttttttgctaaaacgacactcgttttaaaacgga 38140913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 80 - 170
Target Start/End: Complemental strand, 4759034 - 4758944
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||||||||||||||| ||||||||||||| |||| |||||||  | ||||  ||||| ||||||||||||| ||||||| |||||||    
T  4759034 gttattattgcattggaaagtgaaagtgacatttattttaaaacaatttctttttactaaagcgacactcattttaaaacggatgaagtaa 4758944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 42886794 - 42886704
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaactttttt-ggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||||| | ||||| ||||||||||  ||||||  |||||| ||||||| ||||||||||||||||||||||| ||||    
T  42886794 gttattattgcattggaaatttaaagtaacattcattttgaaacaatttttttttggctaaagcgacactcattttgaaacggagggagta 42886704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 4392239 - 4392150
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||  |||||||||||||| ||||||||||||  ||||||   ||||| |||||||||||||||||||| ||||||||| ||||    
T  4392239 gttattattaaattggaaactgaaactgacattcattttgaaacaattattttttgctaaaacgacactcattttaaaacggaggtagta 4392150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 154
Target Start/End: Original strand, 30426378 - 30426509
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa- 125  Q
    ||||||||||||||| |||| |||||||||||||||||||||           ||||||||||||||||||||||||| ||||||||||||  ||||||     
T  30426378 tttggaagtagtgtaacatagtattaattgaagggtacaattaaaaagaaaaagttattattgcattggaaactgaaaatgacattcattttgaaacaat 30426477  T
Q  126 ---acttttttggctaaaacgacactcatttt 154  Q
         ||||||||||||||||||| |||||||    
T  30426478 tttttttttttggctaaaacgacattcatttt 30426509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 35557866 - 35557954
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||||||||||||||||| ||  |||| |||||||  ||||||  ||||| ||||||||||||| ||||||||| ||||    
T  35557866 ttattattgcattggaaactgaaagtgatatatattttaaaacaatttttttttcctaaatcgacactcattttaaaacggagggagta 35557954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 162
Target Start/End: Original strand, 36729863 - 36729996
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaatt-nnnnnnnnnngttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||||||||| |||| ||||||||||||||||||||||||||           ||||||||||||||||||| ||||||||||||||||||  |         
T  36729863 ctttggaagtaatgtaacataatattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaattgaaagtgacattcattttga---tt 36729959  T
Q  126 acttttttggctaaaacgacactcattttgaaacgga 162  Q
      ||||||||||||||||||||||||||| |||||||    
T  36729960 ttttttttggctaaaacgacactcattttaaaacgga 36729996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 44676264 - 44676181
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaactttttt--ggct-aaaacgacactcattttgaaacg 160  Q
    ||||| ||||||||||||||||||||||||||||||||  ||||||| ||||||  |||| ||||||||||||||||| |||||    
T  44676264 gttatcattgcattggaaactgaaagtgacattcattttgaaacaaattttttttgggctaaaaacgacactcattttaaaacg 44676181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 43580497 - 43580430
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||| ||||  ||||||| ||||||||||||| |||| |||||||||||||||||||||||    
T  43580497 aaagtgacatttattttgaaacaaatttttttggctaaagcgacgctcattttgaaacggaggaagta 43580430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 11019934 - 11020014
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||||||| ||| ||||||||||||| |||| |||||||| |||||||  ||||| |||||| |||||||||||||    
T  11019934 ttattattgcattgaaaaatgaaagtgacattaattttaaaacaaa-ttttttgtttaaaaggacacttattttgaaacgga 11020014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 11393642 - 11393537
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||||||||||||||| |||  |||||||||||||||||||||           ||||||||||||||||||| ||||| |||||||||||| |||||||    
T  11393642 ctttggaagtagtgtaacattgtattaattgaagggtacaattgaaaagaaaaagttattattgcattggaaattgaaaatgacattcattttaaaacaa 11393543  T
Q  126 actttt 131  Q
    | ||||    
T  11393542 attttt 11393537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 20512628 - 20512694
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||| |||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  20512628 aaagcgacattcattttgaaacaat-ttttttggctaaaacgacactcattttgaaacggagggagta 20512694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 25722592 - 25722659
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||  ||| ||  ||||||||||||| ||||||||||||||||||||||| ||||    
T  25722592 aaagtgacattcattttgaaataattttttttggctaaagcgacactcattttgaaacggagggagta 25722659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 164
Target Start/End: Original strand, 36844850 - 36844933
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggagg 164  Q
    |||||||||||||| |||||||||||||||||  |||  ||||||   ||||| | |||||||||||||||||| |||||||||    
T  36844850 ttattattgcattgaaaactgaaagtgacattggttttgaaacaattattttttgttaaaacgacactcattttaaaacggagg 36844933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 37225726 - 37225793
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||  ||||||  |||||| |||||||||||||||||||| ||||||||| ||||    
T  37225726 aaagtgacattcattttgaaacaattttttttagctaaaacgacactcattttaaaacggagggagta 37225793  T

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Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 38363828 - 38363750
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaac 159  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||    |||||| |||||||||||||||||||| ||||    
T  38363828 gttattattgcattgtaaactgaaagtgacattcattttgaaac-ttttttttttgctaaaacgacactcattttaaaac 38363750  T

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Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 48901763 - 48901678
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaa---acttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||||||||||||| ||||||||||||  ||||||     |||||| | |||||||||| |||||||||||||||    
T  48901763 gttattattgcattggaaactgaaaatgacattcattttgaaacaattttttttttttgataaaacgacaatcattttgaaacgga 48901678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 48903329 - 48903244
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaa---acttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||||||||||||| ||||||||||||  ||||||     |||||| | |||||||||| |||||||||||||||    
T  48903329 gttattattgcattggaaactgaaaatgacattcattttgaaacaattttttttttttgataaaacgacaatcattttgaaacgga 48903244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 54261437 - 54261370
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||| ||| |||||||  ||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  54261437 aaagcgacgttcattttgaaacaattttttttggctaaaacgacactcattttgaaacggagggagta 54261370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 6938194 - 6938256
Alignment:
Q  107 gacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||| |||||||| ||||||  ||||| ||||||||||||||||||||||| ||||    
T  6938194 gacattcattttaaaacaaattttttttactaaagcgacactcattttgaaacggagggagta 6938256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 2662613 - 2662669
Alignment:
Q  107 gacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggag 163  Q
    ||||||||||| ||||||||  |||||||||||| ||||||||||||| ||||||||    
T  2662613 gacattcattttaaaacaaatctttttggctaaagcgacactcattttaaaacggag 2662669  T

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Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 170
Target Start/End: Complemental strand, 54918145 - 54918065
Alignment:
Q  90 cattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||| ||| || ||||||| |||||||  ||||||  ||||||||| |||| |||||||||||||||||||||| |||||    
T  54918145 cattgaaaagtgcaagtgactttcattttgaaacaattttttttggcaaaaatgacactcattttgaaacggagggagtaa 54918065  T

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Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 31853670 - 31853745
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttga 156  Q
    ||||||||| | |||||||| ||||||||||| ||||  ||||||  ||||||||||||||| || ||||||||||    
T  31853670 ttattattgtactggaaactaaaagtgacatttattttgaaacaattttttttggctaaaacaactctcattttga 31853745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 19373629 - 19373547
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||| ||||| ||| ||||||||||| ||||||  ||||||  ||||||  |||||| |||||||||||| |||||||    
T  19373629 gttattatttcattgaaaattgaaagtgacagtcattttgaaacaattttttttaactaaaatgacactcattttaaaacgga 19373547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 168
Target Start/End: Complemental strand, 41287098 - 41287032
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagt 168  Q
    |||||||||| ||||| |||| ||  |||||| |||||| |||||||||||||||||||||| ||||    
T  41287098 aaagtgacatccattttaaaataattttttttagctaaagcgacactcattttgaaacggagaaagt 41287032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 43688017 - 43688079
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggagg 164  Q
    ||||||||||| ||||   |||||  |||||| ||||||||||||||||||||||||||||||    
T  43688017 aaagtgacatttattttggaacaatttttttttgctaaaacgacactcattttgaaacggagg 43688079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 170
Target Start/End: Complemental strand, 44648359 - 44648321
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  44648359 ttggctaaaacgacactcattttgaaacggagggagtaa 44648321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 47895451 - 47895534
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaa----acttttttggctaaaacgacactcattttgaaac 159  Q
    ||||||||||||||||||| ||||||||||||||||||  ||||||      |||||| | ||||| |||||||||||||||||    
T  47895451 gttattattgcattggaaattgaaagtgacattcattttgaaacaatttttttttttttgttaaaatgacactcattttgaaac 47895534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 23525262 - 23525225
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||||||||| |||||||||||||||||    
T  23525262 ttggctaaaacgacactcatattgaaacggaggaagta 23525225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 23525424 - 23525505
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||||||   ||||| ||||| |||| |||||||  ||||||| ||||||||  ||| |||||||||||||    
T  23525424 ttattattgcattggaaatcaaaagtaacatttattttaaaacaattttttttgactaaaacgggacttattttgaaacgga 23525505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 790118 - 790058
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||| ||||  ||||||| |||||||| ||||  ||||||||||||||||||||    
T  790118 aaagtgacattaattttgaaacaaatttttttggttaaagggacactcattttgaaacgga 790058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 9189542 - 9189621
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacg 160  Q
    ||||||||| ||||| |||||||||||||||||||||| ||||  || ||||||   ||||| |||||||||||| |||||    
T  9189542 gttattatttcattgaaaactgaaagtgacattcattttaaaa-taattttttttattaaaatgacactcattttaaaacg 9189621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 25061726 - 25061667
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||| ||||||||| |||||||  |||||||||||||  ||||||||||||||||||||    
T  25061726 aaagtggcattcattttaaaacaat-ttttttggctaaagtgacactcattttgaaacgga 25061667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 32304036 - 32304087
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcatttt 154  Q
    |||||||||||||||| |||||||| |||||||||||||  ||||||||||||    
T  32304036 aaagtgacattcatttcaaaacaaa-ttttttggctaaagtgacactcatttt 32304087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 176
Target Start/End: Complemental strand, 42940004 - 42939916
Alignment:
Q  88 tgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaatttta 176  Q
    ||||||| ||| ||||| ||||||||||||  ||||||| | |||| | |||| ||||||||||||| ||||||| | ||||| |||||    
T  42940004 tgcattgaaaaatgaaaatgacattcattttgaaacaaattatttttgttaaagcgacactcattttaaaacggatggagtaagtttta 42939916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 43169352 - 43169288
Alignment:
Q  106 tgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||||||||  ||||||  ||||||| ||||| ||||||||||||| ||||||||| |||||    
T  43169352 tgacattcattttgaaacaattttttttgactaaagcgacactcattttaaaacggagggagtaa 43169288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 1341051 - 1341117
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||||| |||| ||| ||||||| |||||| |||||||||||| ||||| ||| ||||    
T  1341051 aaagtgacattcattttaaaataaa-ttttttgactaaaatgacactcattttaaaacgaagggagta 1341117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 45392009 - 45392068
Alignment:
Q  100 tgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaac 159  Q
    |||| |||| ||||||||  ||||||  |||||||||| |||||||||||||||||||||    
T  45392009 tgaaggtgatattcattttgaaacaattttttttggctcaaacgacactcattttgaaac 45392068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 171
Target Start/End: Complemental strand, 52222799 - 52222760
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagtaaa 171  Q
    ||||||||||||||||| ||||||||||||||| ||||||    
T  52222799 ttggctaaaacgacactaattttgaaacggagggagtaaa 52222760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 4391926 - 4391864
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggagg 164  Q
    ||||||| |||||||| |||||||| |||||||||||||  |||| ||| | |||||||||||    
T  4391926 aaagtgatattcattttaaaacaaatttttttggctaaagtgacattcagtatgaaacggagg 4391864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 170
Target Start/End: Original strand, 4392099 - 4392137
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  4392099 ttggccaaaacgacactcattttgaaacggagggagtaa 4392137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 153
Target Start/End: Original strand, 26187408 - 26187458
Alignment:
Q  103 aagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattt 153  Q
    ||||||||||||||| |||||||  ||||||  ||||||||||||||||||    
T  26187408 aagtgacattcattttaaaacaattttttttaactaaaacgacactcattt 26187458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 26965630 - 26965688
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacg 160  Q
    ||||||||||||||||  ||||||  |||||||||||||  |||||||||||| |||||    
T  26965630 aaagtgacattcattttgaaacaatattttttggctaaagtgacactcattttaaaacg 26965688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 170
Target Start/End: Complemental strand, 31290923 - 31290885
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  31290923 ttggctaaaacgacactcattttaaaacggagggagtaa 31290885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 38363888 - 38363846
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaatt 69  Q
    |||||||||||||||| | || |||||||||||||||||||||    
T  38363888 ctttggaagtagtgtaacgtagtattaattgaagggtacaatt 38363846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 41287549 - 41287591
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaatt 69  Q
    ||||||||||| |||| ||||||||||||||||||||| ||||    
T  41287549 ctttggaagtaatgtaacataatattaattgaagggtataatt 41287591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 42072028 - 42071974
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttg 134  Q
    ||||||||||||||||||||| ||| |||||| ||||| |||||||  |||||||    
T  42072028 gttattattgcattggaaactaaaaatgacatccattttaaaacaattttttttg 42071974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 162
Target Start/End: Complemental strand, 44645335 - 44645301
Alignment:
Q  128 ttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||| ||||||||||||||||||||||||||||    
T  44645335 tttttttgctaaaacgacactcattttgaaacgga 44645301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 170
Target Start/End: Complemental strand, 47895290 - 47895252
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  47895290 ttggctaaagcgacactcattttaaaacggaggaagtaa 47895252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 53560682 - 53560620
Alignment:
Q  107 gacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||| ||||  ||||||| ||||||| ||||| | ||| ||||||||||||||||||||||    
T  53560682 gacatttattttgaaacaaatttttttgactaaagcaacattcattttgaaacggaggaagta 53560620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 647740 - 647789
Alignment:
Q  120 aaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||| |||||||| ||||  |||||||||||||||||||||| ||||    
T  647740 aaacaaatttttttggttaaagtgacactcattttgaaacggagggagta 647789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 19552562 - 19552501
Alignment:
Q  102 aaagtgacattcatttaaaaacaaact-tttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||||||||| |||||||| | ||||| ||||||| |||||| ||||| |||||||    
T  19552562 aaagtgacattcattttaaaacaaattgtttttagctaaaatgacacttattttaaaacgga 19552501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 31853615 - 31853656
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaat 68  Q
    ||||| |||||||||| |||| ||||||||||||||||||||    
T  31853615 ctttgaaagtagtgtaacatagtattaattgaagggtacaat 31853656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 169
Target Start/End: Complemental strand, 39168464 - 39168387
Alignment:
Q  92 ttggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||| ||||||||||||||||  ||| ||  |||||| |||||||||| || |||||| ||| ||||| ||||    
T  39168464 ttggaaactaaaagtgacattcattttgaaataatttttttttgctaaaacgatacccattttaaaatggagggagta 39168387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 41287442 - 41287405
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  41287442 ttggctaaagcgacactcattttgaaacggagggagta 41287405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 42791323 - 42791282
Alignment:
Q  128 ttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    |||||||||||||  |||||||||||||||||||||| ||||    
T  42791323 ttttttggctaaagtgacactcattttgaaacggagggagta 42791282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 45566829 - 45566761
Alignment:
Q  100 tgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||| |||||||||||| |||||||  ||| |||  |||||||||| ||||||||||||||||| ||||    
T  45566829 tgaaaatgacattcattttaaaacaat-tttattgattaaaacgacattcattttgaaacggagggagta 45566761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 47138006 - 47137961
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||||||||||||| ||||| ||| |||||||||||| |||||||    
T  47138006 gttattattgcattgaaaactaaaaatgacattcattttaaaacaa 47137961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 51398214 - 51398251
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  51398214 ttggctaaagcgacactcattttgaaacggagggagta 51398251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 54261621 - 54261658
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  54261621 ttggctaaagcgacactcattttgaaacggagggagta 54261658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 2988557 - 2988525
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggagg 164  Q
    ||||||||| |||||||||||||||||||||||    
T  2988557 ttggctaaagcgacactcattttgaaacggagg 2988525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 2988740 - 2988808
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttg-gctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||  ||||||  ||||||  | |||| ||||||||||||||||||||||| ||||    
T  2988740 aaagtgacattcattttgaaacaattttttttttgataaagcgacactcattttgaaacggagggagta 2988808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 13756932 - 13756968
Alignment:
Q  33 aagtagtgtagcataatattaattgaagggtacaatt 69  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  13756932 aagtaatgtaacataatattaattgaagggtacaatt 13756968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 162
Target Start/End: Original strand, 16240773 - 16240801
Alignment:
Q  134 ggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||||||||||||||||||||||    
T  16240773 ggctaaaacgacactcattttgaaacgga 16240801  T

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Target: scaffold0332 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 80 - 171
Target Start/End: Original strand, 3920 - 4011
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaaa 171  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||| |||||| |||||| || |||||||||||||||||||| ||||||    
T  3920 gttattattgcattgaaaactgaaagtgacattcattttgaaacaaattttttttgctaaagcggcactcattttgaaacggagggagtaaa 4011  T

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Target: scaffold0048 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 62728 - 62587
Alignment:
Q  29 ttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaaac 127  Q
    |||||||||||||| ||||||||||||||||||||||||||           ||||||||| ||| ||||||||||||||||||||||||  ||||||      
T  62728 ttggaagtagtgtaacataatattaattgaagggtacaattaaaaagaaaaagttattattacataggaaactgaaagtgacattcattttgaaacaatt 62629  T
Q  128 ttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||  ||||||||| ||||||||||||||||| ||||||    
T  62628 tttttttactaaaacgatactcattttgaaacggatgaagta 62587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 174
Target Start/End: Original strand, 3560 - 3708
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    |||| ||||||||||| |||| |||||||||||||||||||||           |||||||||| |||||||||||||||||||||||||||  ||| ||    
T  3560 ctttagaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgtattggaaactgaaagtgacattcattttgaaaaaa 3659  T
Q  126 acttttttggctaaaacgacactcattttgaaacggaggaagtaaattt 174  Q
       |||||||| ||||||||||||||||||||| ||||| |||| ||||    
T  3660 ttatttttggcaaaaacgacactcattttgaaaaggagggagtatattt 3708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 624 - 704
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||||||||||||||||||||||||| ||||  ||  |||||||||||||||||| |||||||||||||||    
T  624 ttattattgcattggaaactgaaagtgacattcattttaaaa-taatatttttggctaaaacgacattcattttgaaacgga 704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 45419 - 45347
Alignment:
Q  98 actgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||||||||||||||||  ||||||  ||||||||||||||||||||| |||||||||||||| ||||||    
T  45419 actgaaagtgacattcattttgaaacaattttttttggctaaaacgacactaattttgaaacggagaaagtaa 45347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 70586 - 70653
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  70586 aaagtgacattcattttgaaacaattttttttggctaaaacgacactcattttgaaacggagggagta 70653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 18364 - 18446
Alignment:
Q  80 gttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    ||||||||||||||||||||||||| ||||||||||||  || |||  ||||||  ||||||||||||| |||||||||||||    
T  18364 gttattattgcattggaaactgaaaatgacattcattttgaaccaatttttttttactaaaacgacacttattttgaaacgga 18446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 159
Target Start/End: Original strand, 1470 - 1601
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaaa 126  Q
    ||||||||||||||| ||||||||||| ||||||||||||||           ||||| |||||||| |||||||||||||||||||||||  |||| ||    
T  1470 tttggaagtagtgtaacataatattaaatgaagggtacaattgaaaagaaaaagttatcattgcattagaaactgaaagtgacattcattttgaaac-aa 1568  T
Q  127 cttttttggctaaaacgacactcattttgaaac 159  Q
     |||||||  |||||||||||| ||||||||||    
T  1569 tttttttgattaaaacgacacttattttgaaac 1601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 169
Target Start/End: Original strand, 628 - 770
Alignment:
Q  27 ctttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnn-gttattattgcattggaaactgaaagtgacattcatttaaaaacaa 125  Q
    ||||||||||||||||  |||||||||||||||||||||||||           ||||||||||||||||||| || ||||||||||||||| |||| |     
T  628 ctttggaagtagtgtat-ataatattaattgaagggtacaattaaaaagaaaaagttattattgcattggaaattgtaagtgacattcattttaaaatat 726  T
Q  126 acttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
      |||||| |||||||||||||| || || ||||||||| ||||    
T  727 tttttttttgctaaaacgacactaatcttaaaacggagggagta 770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 162
Target Start/End: Original strand, 21138 - 21273
Alignment:
Q  28 tttggaagtagtgtagcataatattaattgaagggtacaattnnnnnnnnnng-ttattattgcattggaaactgaaagtgacattcatttaaaaacaaa 126  Q
    ||||||||||||||| |||| |||||||||||||||||||||            ||||||||||||| |||||||||||||||| |||||| |||| ||     
T  21138 tttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaaattattattgcatttgaaactgaaagtgacagtcattttaaaataat 21237  T
Q  127 cttttttggctaaaacgacactcattttgaaacgga 162  Q
     ||||||   |||||||||||||||||| |||||||    
T  21238 ttttttttattaaaacgacactcattttaaaacgga 21273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 170
Target Start/End: Original strand, 797 - 884
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    |||||||| || ||||||||||||||||||||||||   ||||||  |||||| |||||||||||| ||||||||||||| ||| |||||    
T  797 ttattattccagtggaaactgaaagtgacattcattgtgaaacaa--tttttttgctaaaacgacattcattttgaaacgaagggagtaa 884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 4183 - 4101
Alignment:
Q  81 ttattattgcattggaaactgaaag-tgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||||||| ||| |||||  |||||||||||| |||| | | |||||||| |||||||||| |||||||||||||||    
T  4183 ttattattgcattgaaaattgaaaaatgacattcattttaaaatatatttttttggttaaaacgacattcattttgaaacgga 4101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 1662 - 1595
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||  ||| ||  |||||||||||||  |||||||||||||||||||||| ||||    
T  1662 aaagtgacattcattttgaaataattttttttggctaaagtgacactcattttgaaacggagggagta 1595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 9401 - 9334
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||||||||||||||  ||| ||  |||||||||||||  |||||||||||||||||||||| ||||    
T  9401 aaagtgacattcattttgaaataattttttttggctaaagtgacactcattttgaaacggagggagta 9334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 9475 - 9407
Alignment:
Q  100 tgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagta 169  Q
    ||||| |||||||||||| ||||||   ||||||||||||||||||||| ||||| ||||||| ||||||    
T  9475 tgaaaatgacattcattttaaaacatt-ttttttggctaaaacgacacttattttaaaacggatgaagta 9407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 75410 - 75490
Alignment:
Q  81 ttattattgcattggaaactgaaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||||| ||| |||||||| |||||||||||||  |||| || | |||| |||||||||||||| ||||| |||||||    
T  75410 ttattattgctttgaaaactgaatgtgacattcattttgaaac-aattctttttgctaaaacgacacttattttaaaacgga 75490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 13190 - 13250
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacgga 162  Q
    |||||||| ||||||| |||||||  |||||||| ||||  ||||||||||||||||||||    
T  13190 aaagtgacgttcattttaaaacaattttttttggttaaagtgacactcattttgaaacgga 13250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 102 - 168
Target Start/End: Complemental strand, 321747 - 321683
Alignment:
Q  102 aaagtgacattcatttaaaaacaaacttttttggctaaaacgacactcattttgaaacggaggaagt 168  Q
    |||| ||||||||||| |||||||  |||||| |||||| ||||||||||||| ||| |||||||||    
T  321747 aaagcgacattcattttaaaacaa--tttttttgctaaagcgacactcattttaaaatggaggaagt 321683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 170
Target Start/End: Original strand, 158292 - 158330
Alignment:
Q  132 ttggctaaaacgacactcattttgaaacggaggaagtaa 170  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  158292 ttggctaaaacgacactcattttaaaacggatgaagtaa 158330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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