View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15182_high_44 (Length: 365)
Name: NF15182_high_44
Description: NF15182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15182_high_44 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 101 - 365
Target Start/End: Complemental strand, 26306846 - 26306583
Alignment:
| Q |
101 |
cataaatgaactttttgggaataataatattgagtcaaaagctgaccattatacatttattatacacatttgttaaatcgcgagaaatcagataatccct |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||| |
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| T |
26306846 |
cataaatgaactttttgggaataataatattgagtcaaaagctgaccattatacatttaat-tatacatttgttaaatcgcgagaaatcagataatccct |
26306748 |
T |
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| Q |
201 |
gaaatttgttctactccttaaccaagtcttttatatttatatatatagctgcaaaccaggtcaatttttcaatcacatttttctttctctctctgcattc |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26306747 |
gaaatttgttctactccttaaccaagtcttttatatttatatatatagctgcaaaccaggtcaatttttcaatcacatttttctttctctctctgcattc |
26306648 |
T |
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| Q |
301 |
tttgctacaaaataggtaactgtattctattctacttaccaatcactttcttacatttctcttat |
365 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26306647 |
tttgctagaaaataggtaactgtattctattctacttaccaatcactttcttacatttctcttat |
26306583 |
T |
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