View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15182_high_91 (Length: 233)

Name: NF15182_high_91
Description: NF15182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15182_high_91
NF15182_high_91
[»] chr4 (17 HSPs)
chr4 (64-233)||(19130281-19130450)
chr4 (65-212)||(3167378-3167525)
chr4 (71-230)||(32291328-32291487)
chr4 (92-216)||(32292112-32292236)
chr4 (122-216)||(14473361-14473455)
chr4 (125-206)||(40912799-40912880)
chr4 (127-233)||(14472812-14472917)
chr4 (71-168)||(39412771-39412868)
chr4 (65-208)||(33463677-33463821)
chr4 (65-132)||(19129525-19129592)
chr4 (65-146)||(19860330-19860411)
chr4 (65-119)||(37638672-37638727)
chr4 (71-161)||(20174976-20175066)
chr4 (71-156)||(5235380-5235465)
chr4 (65-135)||(14472485-14472556)
chr4 (64-120)||(38010840-38010897)
chr4 (65-136)||(25655615-25655687)
[»] chr5 (13 HSPs)
chr5 (65-213)||(35107504-35107652)
chr5 (65-132)||(36912246-36912313)
chr5 (185-233)||(17591271-17591319)
chr5 (63-208)||(6007558-6007704)
chr5 (65-132)||(17591365-17591431)
chr5 (185-233)||(36912879-36912927)
chr5 (68-132)||(17590568-17590632)
chr5 (65-161)||(5620821-5620917)
chr5 (65-120)||(4790210-4790265)
chr5 (65-119)||(21771267-21771322)
chr5 (65-119)||(35106873-35106927)
chr5 (71-135)||(8320881-8320945)
chr5 (72-132)||(36912973-36913033)
[»] chr7 (18 HSPs)
chr7 (71-220)||(39045130-39045280)
chr7 (92-216)||(39044368-39044493)
chr7 (185-233)||(14735470-14735518)
chr7 (65-157)||(42607081-42607173)
chr7 (65-132)||(14735357-14735424)
chr7 (65-132)||(14736151-14736218)
chr7 (71-168)||(33686932-33687029)
chr7 (65-161)||(20560233-20560329)
chr7 (58-110)||(25137928-25137980)
chr7 (65-161)||(33139774-33139870)
chr7 (65-161)||(33140246-33140342)
chr7 (90-157)||(41224798-41224865)
chr7 (123-209)||(8997-9085)
chr7 (109-157)||(19794442-19794490)
chr7 (65-161)||(20559746-20559842)
chr7 (65-156)||(42607770-42607860)
chr7 (64-156)||(42900646-42900738)
chr7 (65-161)||(42901088-42901184)
[»] chr8 (7 HSPs)
chr8 (65-226)||(35839722-35839883)
chr8 (65-161)||(14197659-14197755)
chr8 (179-217)||(4627050-4627088)
chr8 (91-208)||(6013549-6013664)
chr8 (65-157)||(35943076-35943168)
chr8 (65-113)||(31408175-31408223)
chr8 (94-209)||(33688253-33688365)
[»] chr2 (7 HSPs)
chr2 (71-161)||(37996535-37996625)
chr2 (65-134)||(34617653-34617722)
chr2 (65-161)||(16681566-16681662)
chr2 (71-146)||(6610010-6610085)
chr2 (71-146)||(15562007-15562082)
chr2 (65-146)||(3705337-3705418)
chr2 (63-114)||(8164404-8164456)
[»] chr6 (9 HSPs)
chr6 (71-168)||(18605804-18605901)
chr6 (65-161)||(28983244-28983340)
chr6 (65-161)||(34717707-34717803)
chr6 (65-145)||(34717242-34717322)
chr6 (71-146)||(7635602-7635677)
chr6 (65-147)||(16765981-16766063)
chr6 (97-209)||(1770687-1770799)
chr6 (65-120)||(25067842-25067898)
chr6 (65-161)||(28982782-28982877)
[»] chr3 (17 HSPs)
chr3 (65-161)||(930385-930481)
chr3 (65-161)||(11442107-11442203)
chr3 (71-161)||(26006730-26006820)
chr3 (65-143)||(32474432-32474510)
chr3 (65-119)||(44021286-44021340)
chr3 (70-163)||(50766635-50766727)
chr3 (65-208)||(54901319-54901463)
chr3 (65-161)||(21166108-21166204)
chr3 (65-156)||(14788557-14788648)
chr3 (71-146)||(20586078-20586153)
chr3 (65-127)||(43521077-43521139)
chr3 (65-146)||(32473761-32473842)
chr3 (126-206)||(46187209-46187290)
chr3 (65-161)||(929911-930007)
chr3 (65-113)||(8327183-8327231)
chr3 (65-113)||(50836216-50836264)
chr3 (65-113)||(50839589-50839637)
[»] chr1 (18 HSPs)
chr1 (65-161)||(48594177-48594273)
chr1 (65-161)||(48598788-48598884)
chr1 (91-208)||(37422981-37423097)
chr1 (71-113)||(38328886-38328928)
chr1 (65-209)||(42645943-42646086)
chr1 (64-161)||(12800422-12800519)
chr1 (64-161)||(28371655-28371752)
chr1 (71-168)||(32537651-32537748)
chr1 (65-161)||(2820958-2821054)
chr1 (126-206)||(29148223-29148303)
chr1 (71-146)||(38468912-38468987)
chr1 (65-135)||(17151002-17151072)
chr1 (65-135)||(17151857-17151927)
chr1 (65-120)||(2687719-2687775)
chr1 (109-145)||(37179165-37179201)
chr1 (109-157)||(38634917-38634965)
chr1 (65-135)||(42383720-42383789)
chr1 (70-162)||(48153110-48153202)
[»] scaffold0022 (1 HSPs)
scaffold0022 (71-146)||(61580-61655)
[»] scaffold0508 (1 HSPs)
scaffold0508 (71-113)||(4624-4666)
[»] scaffold0180 (1 HSPs)
scaffold0180 (91-157)||(23047-23113)


Alignment Details
Target: chr4 (Bit Score: 162; Significance: 1e-86; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 64 - 233
Target Start/End: Complemental strand, 19130450 - 19130281
Alignment:
Q  64 tggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcctc 163  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19130450 tggtggggtttagcatgggaaagactattttttcccatcatgggaaaattgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcctc 19130351  T
Q  164 taacactgaattttttctcactttcttccccaaccattctctctcccacatgtctcttccacccactatc 233  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19130350 taacactgaattttttctcactttcttccccaaccattctctctcccacatgtctcttccacccactatc 19130281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 65 - 212
Target Start/End: Complemental strand, 3167525 - 3167378
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcctct 164  Q
    |||||||||||||||||||||||  | ||||||||| ||||||||||||||||||  |||||||||||||||||| |||||||| ||||||||||||| |    
T  3167525 ggtggggtttagcatgggaaagattactttttcccaccatgggaaagttgttttttaaccatttgattaaatgaataacacaatattatcatgctcctat 3167426  T
Q  165 aacactgaattttttctcactttcttccccaaccattctctctcccac 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3167425 aacactgaattttttctcactttcttccccaaccattctctctcccac 3167378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 71 - 230
Target Start/End: Original strand, 32291328 - 32291487
Alignment:
Q  71 gtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcctctaacact 170  Q
    ||||||| |||||||| | |||||||||||  |||||||||||||||||  ||| ||||||||||| |||||||||||||||| ||||||   ||||| |    
T  32291328 gtttagcctgggaaaggctattttttcccactatgggaaagttgtttttcaaccctttgattaaataaagaacacaatcttattatgctcgattaacatt 32291427  T
Q  171 gaattttttctcactttcttccccaaccattctctctcccacatgtctcttccacccact 230  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  32291428 ggattttttctcactttcttccccaaccattctctctcccacatgtctctctcacccact 32291487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 92 - 216
Target Start/End: Complemental strand, 32292236 - 32292112
Alignment:
Q  92 tttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcctctaacactgaattttttctcactttcttc 191  Q
    ||||||||| |||| ||||||| |||||  ||| |||||||||||  | |||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  32292236 tttttcccaccatgagaaagttatttttcaaccctttgattaaatagaaaacacaatcttatcatgctcatttaacactggattttttctcactttcttc 32292137  T
Q  192 cccaaccattctctctcccacatgt 216  Q
    |||||||||||||||||||||||||    
T  32292136 cccaaccattctctctcccacatgt 32292112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 122 - 216
Target Start/End: Complemental strand, 14473455 - 14473361
Alignment:
Q  122 accatttgattaaatgaagaacacaatcttatcatgctcctctaacactgaattttttctcactttcttccccaaccattctctctcccacatgt 216  Q
    ||||||| ||||||| || |||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  14473455 accatttaattaaataaaaaacacaatcttatcatgctcatctaacactgaattttttatcactttcttcctcaaccattctctctcacacatgt 14473361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 125 - 206
Target Start/End: Complemental strand, 40912880 - 40912799
Alignment:
Q  125 atttgattaaatgaagaacacaatcttatcatgctcctctaacactgaattttttctcactttcttccccaaccattctctc 206  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||    
T  40912880 atttgattaaataaagaacacaatcttatcatgctcctttaacattagattttttctcactttcttccccaaccattctctc 40912799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 127 - 233
Target Start/End: Original strand, 14472812 - 14472917
Alignment:
Q  127 ttgattaaatgaagaacacaatcttatcatgctcctctaacact-gaattttttctcactttcttccccaaccattctctctcccacatgtctcttccac 225  Q
    |||||||||||||  ||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||  ||||||| | ||||||||| |||    
T  14472812 ttgattaaatgaaacacacaatcttatcatgctcctctaacactggatttttttctcactttcttctccaaccat--tctctccgagatgtctctttcac 14472909  T
Q  226 ccactatc 233  Q
    ||||||||    
T  14472910 ccactatc 14472917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 168
Target Start/End: Original strand, 39412771 - 39412868
Alignment:
Q  71 gtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcctctaaca 168  Q
    |||||||||||||||| | | ||||||||||||||||||||||  ||||  |||||| ||| ||||||  |||||| ||||||||||||||| |||||    
T  39412771 gtttagcatgggaaaggctaatttttcccatcatgggaaagttagtttttaaccattggatcaaatgataaacacactcttatcatgctcctttaaca 39412868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 208
Target Start/End: Original strand, 33463677 - 33463821
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattt-tttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcctc 163  Q
    |||||||||||| |||||||||  ||||| ||| |||| |||||||| ||| |||||| |||||||||||||| |||| |||| | |||||||| ||       
T  33463677 ggtggggtttagaatgggaaagggaatttgttttccatgatgggaaaattgattttgg-ccatttgattaaataaagagcacactattatcatgttctca 33463775  T
Q  164 taacactgaatt-ttttctcactttcttccccaaccattctctctc 208  Q
     ||||||||||| ||||| |||| |||| || ||| ||||||||||    
T  33463776 caacactgaattattttcacactatctttccaaacaattctctctc 33463821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 19129525 - 19129592
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgatt 132  Q
    ||||| ||||||||||  |||| | ||||| ||||| ||||||||||||||||||| |||||||||||    
T  19129525 ggtggagtttagcatgaaaaaggctattttctcccaccatgggaaagttgtttttgaaccatttgatt 19129592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 146
Target Start/End: Original strand, 19860330 - 19860411
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacaca 146  Q
    |||| |||||||||||||||||  | |||||||||| ||||||||||||  |||| ||||||| ||| |||  |||||||||    
T  19860330 ggtgaggtttagcatgggaaagctatttttttcccaccatgggaaagttagtttttgaccattagatcaaaccaagaacaca 19860411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 37638672 - 37638727
Alignment:
Q  65 ggtggggtttagcatgggaaaga-caattttttcccatcatgggaaagttgttttt 119  Q
    ||||||||||||||||||||||| || ||  |||||||||||||||||||| ||||    
T  37638672 ggtggggtttagcatgggaaagaccagttgcttcccatcatgggaaagttgctttt 37638727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 20174976 - 20175066
Alignment:
Q  71 gtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcc 161  Q
    |||||||||||||||| | | ||||||||| ||||||||||||  ||||  |||||| ||| |||  |||||||||  |||||||| ||||    
T  20174976 gtttagcatgggaaaggctaatttttcccaccatgggaaagttagtttttaaccattagatcaaaccaagaacacatccttatcatactcc 20175066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 5235380 - 5235465
Alignment:
Q  71 gtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcat 156  Q
    |||||||||||||||| | | ||||||||| ||||||||||||  ||||  |||||| ||| |||  |||||||||  ||||||||    
T  5235380 gtttagcatgggaaaggctaatttttcccaccatgggaaagttagtttttaaccattagatcaaaccaagaacacatccttatcat 5235465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 135
Target Start/End: Original strand, 14472485 - 14472556
Alignment:
Q  65 ggtggggtttagcatgggaaagacaatttttt--cccatcatgggaaagttgtttttggaccatttgattaaa 135  Q
    ||||||||||||  |||||||||| |||||||  |||| ||||| ||||||||||||  ||||||||||||||    
T  14472485 ggtggggtttagtctgggaaagactattttttttcccaccatggaaaagttgttttt-aaccatttgattaaa 14472556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 38010897 - 38010840
Alignment:
Q  64 tggtggggtttagcatgggaaagacaattt-tttcccatcatgggaaagttgtttttg 120  Q
    ||||| |||||||||||||||||   |||| ||| |||||||||||||||||||||||    
T  38010897 tggtgaggtttagcatgggaaaggatatttgttttccatcatgggaaagttgtttttg 38010840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 25655687 - 25655615
Alignment:
Q  65 ggtggggtttagcatgggaaagacaa-ttttttcccatcatgggaaagttgtttttggaccatttgattaaat 136  Q
    |||||||||||   |||||||||| | |||||||||| ||||||||||||  |||| ||||||| ||||||||    
T  25655687 ggtggggtttaatttgggaaagactagttttttcccaccatgggaaagttagtttttgaccattagattaaat 25655615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 8e-48; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 35107652 - 35107504
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcctct 164  Q
    |||||||||||||||  ||||  | ||||||||||| ||| | ||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||    
T  35107652 ggtggggtttagcataagaaatgctattttttcccaccatagaaaagttgtttttgaaccatttgatcaaatgaagaacacaatcttaccatgctcctct 35107553  T
Q  165 aacactgaattttttctcactttcttccccaaccattctctctcccaca 213  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  35107552 aacactgaattttttctcactttattccccaaccattctctcttccaca 35107504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 36912246 - 36912313
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgatt 132  Q
    |||||||||||||||||||||| | ||||||||||| ||||||||||||||||||| |||||||||||    
T  36912246 ggtggggtttagcatgggaaaggctattttttcccaccatgggaaagttgtttttgaaccatttgatt 36912313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 17591319 - 17591271
Alignment:
Q  185 tttcttccccaaccattctctctcccacatgtctcttccacccactatc 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17591319 tttcttccccaaccattctctctcccacatgtctcttccacccactatc 17591271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 63 - 208
Target Start/End: Complemental strand, 6007704 - 6007558
Alignment:
Q  63 gtggtggggtttagcatgggaaagacaattt-tttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcc 161  Q
    |||||||||||||| |||||||||  ||||| |||||||| |||||||||||| |||||| |||||||||||||| |||| |||| | |||||||| ||     
T  6007704 gtggtggggtttagaatgggaaagggaatttgtttcccatgatgggaaagttgattttgg-ccatttgattaaataaagagcacactattatcatgttct 6007606  T
Q  162 tctaacactgaatt-ttttctcactttcttccccaaccattctctctc 208  Q
       ||||||||||| ||||| |||| |||| || ||| ||||||||||    
T  6007605 cacaacactgaattattttcacactatctttccaaacaattctctctc 6007558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 17591431 - 17591365
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgatt 132  Q
    |||||| ||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||||||    
T  17591431 ggtgggatttagcatgggaaagactattttttcc-accatgggaaagttgtttttgaaccatttgatt 17591365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 36912927 - 36912879
Alignment:
Q  185 tttcttccccaaccattctctctcccacatgtctcttccacccactatc 233  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  36912927 tttcttccccaacccttctctctctcacatgtctcttccacccactatc 36912879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 17590568 - 17590632
Alignment:
Q  68 ggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgatt 132  Q
    |||||||| |||| ||||||| ||||||||| | |||||||||| |||||||| |||||||||||    
T  17590568 ggggtttaacatgagaaagactattttttcctaccatgggaaagatgtttttgaaccatttgatt 17590632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 161
Target Start/End: Complemental strand, 5620917 - 5620821
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcc 161  Q
    |||| |||||||||||||||||  | |||||||||| ||||||||| ||  |||| ||||||| ||| |||  |||||||||  |||||||| ||||    
T  5620917 ggtgaggtttagcatgggaaagttacttttttcccaccatgggaaaattagtttttgaccattagatcaaaccaagaacacatccttatcatactcc 5620821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 4790265 - 4790210
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttg 120  Q
    |||||||||||| ||||||||||   || |||||||||||||||||||| ||||||    
T  4790265 ggtggggtttaggatgggaaagagggttgtttcccatcatgggaaagttatttttg 4790210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 21771322 - 21771267
Alignment:
Q  65 ggtggggtttagcatgggaaaga-caattttttcccatcatgggaaagttgttttt 119  Q
    ||||||||||||||||||||||| || ||  |||||||||||||||||||| ||||    
T  21771322 ggtggggtttagcatgggaaagaccagttgcttcccatcatgggaaagttgctttt 21771267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 35106873 - 35106927
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgttttt 119  Q
    |||||||||| ||||||||||| | | ||||||| |||||||||||||| |||||    
T  35106873 ggtggggtttggcatgggaaaggctagtttttcctatcatgggaaagttattttt 35106927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 8320881 - 8320945
Alignment:
Q  71 gtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaa 135  Q
    |||||||||||||||| | | ||||||||| ||||||||||||  ||||  |||||| |||||||    
T  8320881 gtttagcatgggaaaggctaatttttcccaccatgggaaagttagtttttaaccattagattaaa 8320945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 36913033 - 36912973
Alignment:
Q  72 tttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgatt 132  Q
    ||||| ||||||||  | |||||||| || ||||| ||||||||||||| |||||||||||    
T  36913033 tttagtatgggaaatgctattttttctcaccatggaaaagttgtttttgaaccatttgatt 36912973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 3e-44; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 71 - 220
Target Start/End: Complemental strand, 39045280 - 39045130
Alignment:
Q  71 gtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcctctaacact 170  Q
    |||||||||||||||| | | ||||||||| ||||| ||||||||||||  ||| ||||||||||| ||||||||| ||||||||||||||  |||||||    
T  39045280 gtttagcatgggaaaggctactttttcccaccatggaaaagttgtttttcaaccctttgattaaataaagaacacagtcttatcatgctccattaacact 39045181  T
Q  171 -gaattttttctcactttcttccccaaccattctctctcccacatgtctct 220  Q
     || |||||||||||||||||||||||||||||||||||||||||||||||    
T  39045180 ggatttttttctcactttcttccccaaccattctctctcccacatgtctct 39045130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 39044368 - 39044493
Alignment:
Q  92 tttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcctctaacactgaa-ttttttctcactttctt 190  Q
    ||||||||| ||||||||| ||||||||  ||| ||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  39044368 tttttcccaccatgggaaaattgtttttcaaccctttgattaaataaagaacacaatcttatcatgctcctttaacactgaatttttttctcactttctt 39044467  T
Q  191 ccccaaccattctctctcccacatgt 216  Q
    ||||||||||||||||||||||||||    
T  39044468 ccccaaccattctctctcccacatgt 39044493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 14735470 - 14735518
Alignment:
Q  185 tttcttccccaaccattctctctcccacatgtctcttccacccactatc 233  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14735470 tttcttccccaatcattctctctcccacatgtctcttccacccactatc 14735518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 65 - 157
Target Start/End: Original strand, 42607081 - 42607173
Alignment:
Q  65 ggtggggtttagcatgggaaagac-aattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatg 157  Q
    ||||||||||||||||||||||   |||| ||||||| |||||||||||||||||| | ||||| ||| ||||||  |||||||||||||||||    
T  42607081 ggtggggtttagcatgggaaaggggaattgtttcccaccatgggaaagttgttttt-gtccattagatcaaatgagaaacacaatcttatcatg 42607173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 14735357 - 14735424
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgatt 132  Q
    ||||| |||||||||||||||||| ||||||||||| ||||| ||| ||||||||| | |||||||||    
T  14735357 ggtggagtttagcatgggaaagactattttttcccaccatggaaaaattgtttttgaatcatttgatt 14735424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 14736218 - 14736151
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgatt 132  Q
    ||||||||||| |||||||||| | ||||||||| | |||||||||| |||||||| |||||||||||    
T  14736218 ggtggggtttaacatgggaaaggctattttttcctaccatgggaaagatgtttttgaaccatttgatt 14736151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 168
Target Start/End: Original strand, 33686932 - 33687029
Alignment:
Q  71 gtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcctctaaca 168  Q
    ||||||||||||||||   | ||||||||| ||||||||||||  ||||  |||||  ||| ||||||  |||||| ||||||||||||||| |||||    
T  33686932 gtttagcatgggaaaggttaatttttcccaccatgggaaagttagtttttaaccatcggatcaaatgataaacacactcttatcatgctcctttaaca 33687029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 161
Target Start/End: Complemental strand, 20560329 - 20560233
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcc 161  Q
    |||| |||||||||||||||||  |  ||||||||| ||||||||||||  |||| ||||||| ||| |||  |||||||||  |||||||| ||||    
T  20560329 ggtgaggtttagcatgggaaagctatatttttcccaccatgggaaagttagtttttgaccattagatcaaaccaagaacacatccttatcatactcc 20560233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 25137980 - 25137928
Alignment:
Q  58 agttagtggtggggtttagcatgggaaagacaattttttcccatcatgggaaa 110  Q
    |||||||||||  |||||||||||||||||| | ||||||||| |||||||||    
T  25137980 agttagtggtgaagtttagcatgggaaagactaatttttcccaccatgggaaa 25137928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 161
Target Start/End: Original strand, 33139774 - 33139870
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcc 161  Q
    |||| |||||||||||||||||  | |||||| ||| |||| |||||||| |||| ||||||| ||| |||  |||||||||  |||||||| ||||    
T  33139774 ggtgaggtttagcatgggaaagctactttttttccaccatgagaaagttggtttttgaccattagatcaaaccaagaacacatccttatcatactcc 33139870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 161
Target Start/End: Complemental strand, 33140342 - 33140246
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcc 161  Q
    |||| ||||||| |||||||||  | |||||||||| ||||||||||||  |||| ||||||| ||| |||  |||||||||  |||||||| ||||    
T  33140342 ggtgaggtttagtatgggaaagttacttttttcccaccatgggaaagttagtttttgaccattagatcaaactaagaacacatccttatcatactcc 33140246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 41224865 - 41224798
Alignment:
Q  90 attttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatg 157  Q
    ||||||||||| ||||||||||||  ||||  |||||||||||||||   ||||||||| ||||||||    
T  41224865 attttttcccaccatgggaaagttagtttttaaccatttgattaaatagggaacacaattttatcatg 41224798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 209
Target Start/End: Complemental strand, 9085 - 8997
Alignment:
Q  123 ccatttgattaaatgaagaacacaatcttatcatgctcctctaacactgaattttttctcac--tttcttccccaaccattctctctcc 209  Q
    |||||||||||||| |||| |||| |||||||||| ||  |  ||| |||||||||| ||||  | ||||||||||| |||||||||||    
T  9085 ccatttgattaaataaagagcacactcttatcatgttctccctacattgaattttttttcacattatcttccccaacaattctctctcc 8997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 157
Target Start/End: Original strand, 19794442 - 19794490
Alignment:
Q  109 aagttgtttttggaccatttgattaaatgaagaacacaatcttatcatg 157  Q
    ||||| ||||||||||||| |||| ||||||||||||| | ||||||||    
T  19794442 aagttttttttggaccattggattgaatgaagaacacatttttatcatg 19794490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 161
Target Start/End: Original strand, 20559746 - 20559842
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcc 161  Q
    |||| |||||||||||||||||  | |||||| ||| ||||||||||||  |||| |||||||  || |||  |||||||||  |||||||| ||||    
T  20559746 ggtgaggtttagcatgggaaagctattttttttccaccatgggaaagttagtttttgaccattaaatcaaaccaagaacacatccttatcatactcc 20559842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 156
Target Start/End: Complemental strand, 42607860 - 42607770
Alignment:
Q  65 ggtggggtttagcatgggaaagac-aattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcat 156  Q
    ||||||||||||||||| ||||   |||| ||||||||||| |||||||| ||||| | ||| ||||| ||||||  ||||||||||||||||    
T  42607860 ggtggggtttagcatggaaaaggggaattgtttcccatcataggaaagttattttt-gtcca-ttgatcaaatgagaaacacaatcttatcat 42607770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 156
Target Start/End: Original strand, 42900646 - 42900738
Alignment:
Q  64 tggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcat 156  Q
    ||||| |||||||||||| ||||  | ||||||  || ||||||||||||  |||| ||||||| ||| |||| |||||||||  ||||||||    
T  42900646 tggtgaggtttagcatggaaaaggtacttttttttcaccatgggaaagttagtttttgaccattagatcaaatcaagaacacatccttatcat 42900738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 161
Target Start/End: Complemental strand, 42901184 - 42901088
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcc 161  Q
    |||| |||||||||||  ||||  | |||||||||| ||||||||||||  |||| ||||||| ||| |||  ||||||||| | ||||||| ||||    
T  42901184 ggtgaggtttagcatgaaaaagctatttttttcccaccatgggaaagttagtttttgaccattagatcaaaccaagaacacattgttatcatactcc 42901088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 35839722 - 35839883
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattt-tttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcctc 163  Q
    ||||||||||||||||||||||  || || |||||||| ||| ||||||| |||||| || ||  |||||| | | || |||| |||||||||| || ||    
T  35839722 ggtggggtttagcatgggaaagggaagttgtttcccatgatgagaaagttttttttg-actatcagattaagtaaggagcacactcttatcatgttc-tc 35839819  T
Q  164 t-aacactgaattttttctcactttcttccccaaccattctctctcccacatgtctcttccacc 226  Q
    | |||||||||||||||| |||| |||| |||||| ||||| |||||  |||||||||| ||||    
T  35839820 tcaacactgaattttttcacactatctttcccaactattctatctcctccatgtctctttcacc 35839883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 161
Target Start/End: Original strand, 14197659 - 14197755
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcc 161  Q
    |||| |||||||||||||||||  | |||||||||| ||||||||||||  |||| ||||||| ||| |||  |||||||||  |||||||| ||||    
T  14197659 ggtgaggtttagcatgggaaagttacttttttcccaccatgggaaagttagtttttgaccattagatcaaagcaagaacacatccttatcatactcc 14197755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 4627050 - 4627088
Alignment:
Q  179 tctcactttcttccccaaccattctctctcccacatgtc 217  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  4627050 tctcactatcttccccaaccattctctctcccacatgtc 4627088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 208
Target Start/End: Complemental strand, 6013664 - 6013549
Alignment:
Q  91 ttttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctc-ctctaacactgaattttttctcactttct 189  Q
    |||||||||| ||||| |||||||  |||  |||| | ||||||| |||||||| | ||||||||||| | ||||| ||||||||||||| || || |||    
T  6013664 ttttttcccaccatgg-aaagttgaatttctaccactagattaaaagaagaacatattcttatcatgcactctcta-cactgaattttttatc-ctatct 6013568  T
Q  190 tccccaaccattctctctc 208  Q
    |||| ||||||||||||||    
T  6013567 tccctaaccattctctctc 6013549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 157
Target Start/End: Original strand, 35943076 - 35943168
Alignment:
Q  65 ggtggggtttagcatgggaaagacaa-ttttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatg 157  Q
    ||||||||||||||||||||||  || || ||||||| |||||| ||||| ||||| | |||||  || ||||||  |||||||||||||||||    
T  35943076 ggtggggtttagcatgggaaagggaagttgtttcccaccatggggaagtt-ttttttgtccattgaatcaaatgagaaacacaatcttatcatg 35943168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 31408223 - 31408175
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagtt 113  Q
    |||| |||||||||||||||||  | |||||||||| ||||||||||||    
T  31408223 ggtgaggtttagcatgggaaagctacttttttcccaccatgggaaagtt 31408175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 209
Target Start/End: Original strand, 33688253 - 33688365
Alignment:
Q  94 tttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcctct-aacactgaattttttctcactttcttcc 192  Q
    |||||||| |||||||||||| | || | |||||||||||||| ||||  ||| |||||| ||| || ||| |||||||||||||| | |||| ||||||    
T  33688253 tttcccat-atgggaaagttgatcttag-ccatttgattaaataaagagtacactcttattatgttc-tctcaacactgaattttt-cacactatcttcc 33688348  T
Q  193 ccaaccattctctctcc 209  Q
    ||||| |||||||||||    
T  33688349 ccaacaattctctctcc 33688365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 37996625 - 37996535
Alignment:
Q  71 gtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcc 161  Q
    |||||||||||||||| | | ||||||||||||||||||||||  ||||  |||||| ||| |||| |||||||||  |||||||| ||||    
T  37996625 gtttagcatgggaaaggctaatttttcccatcatgggaaagttagtttttaaccattagatcaaatcaagaacacatccttatcatactcc 37996535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 134
Target Start/End: Original strand, 34617653 - 34617722
Alignment:
Q  65 ggtggggtttagcatgggaaa-gacaattttttcccatcatgggaaagttgtttttggaccatttgattaa 134  Q
    ||||||||||||||||||||| || |||| ||||||| |||||||||||| ||||| ||||||| ||||||    
T  34617653 ggtggggtttagcatgggaaaggataattgtttcccaccatgggaaagttattttt-gaccattagattaa 34617722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 161
Target Start/End: Original strand, 16681566 - 16681662
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagtt-gtttttggaccatttgattaaatgaagaacacaatcttatcatgctcc 161  Q
    |||| |||||||||||||||||  | || |||||||||||||||||||| |||||||| ||||| ||| |||  |||||||||  |||||||| ||||    
T  16681566 ggtgaggtttagcatgggaaagctagttatttcccatcatgggaaagttagtttttgg-ccattagatcaaaccaagaacacatccttatcatactcc 16681662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 146
Target Start/End: Complemental strand, 6610085 - 6610010
Alignment:
Q  71 gtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacaca 146  Q
    |||||||||||||||| | | ||||||||| ||||||||||||  ||||  |||||| |||||||  |||||||||    
T  6610085 gtttagcatgggaaaggctaatttttcccaccatgggaaagttagtttttaaccattagattaaaccaagaacaca 6610010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 146
Target Start/End: Complemental strand, 15562082 - 15562007
Alignment:
Q  71 gtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacaca 146  Q
    |||||||||||||||| | | ||||||||| ||||||||||||  ||||  |||||| |||||||  |||||||||    
T  15562082 gtttagcatgggaaaggctaatttttcccaccatgggaaagttagtttttaaccattagattaaaccaagaacaca 15562007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 146
Target Start/End: Original strand, 3705337 - 3705418
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacaca 146  Q
    |||| |||||||||| ||||||  | |||||||||| ||||||||||||  |||| ||||||| ||| |||  |||||||||    
T  3705337 ggtgaggtttagcataggaaagctacttttttcccaccatgggaaagttagtttttgaccattagatcaaaccaagaacaca 3705418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 114
Target Start/End: Complemental strand, 8164456 - 8164404
Alignment:
Q  63 gtggtggggtttagcatgggaaa-gacaattttttcccatcatgggaaagttg 114  Q
    |||||||||||||| |||||||| || | |||||||||||||||| |||||||    
T  8164456 gtggtggggtttagtatgggaaaagaaagttttttcccatcatggaaaagttg 8164404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 168
Target Start/End: Complemental strand, 18605901 - 18605804
Alignment:
Q  71 gtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcctctaaca 168  Q
    |||||||||||||||| | | ||||| ||| ||||||||||||  ||||  |||||| ||| ||||||  |||||| ||||||||||||||| |||||    
T  18605901 gtttagcatgggaaaggctaattttttccaccatgggaaagtttgtttttaaccattggatcaaatgataaacacactcttatcatgctcctttaaca 18605804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 161
Target Start/End: Complemental strand, 28983340 - 28983244
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcc 161  Q
    |||| |||||||||||||||||  | |||||||||| ||||||||||||  |||| ||||||| ||| |||  |||||||||  |||||||| ||||    
T  28983340 ggtgaggtttagcatgggaaagctacttttttcccaccatgggaaagttagtttttgaccattagatcaaaccaagaacacatccttatcatactcc 28983244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 161
Target Start/End: Complemental strand, 34717803 - 34717707
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcc 161  Q
    |||| |||||||||||||||||  | |||||||||| ||||||||||||  |||| ||||||| ||| |||  |||||||||  |||||||| ||||    
T  34717803 ggtgaggtttagcatgggaaagctacttttttcccaccatgggaaagttagtttttgaccattagatcaaaccaagaacacatccttatcatactcc 34717707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 145
Target Start/End: Original strand, 34717242 - 34717322
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacac 145  Q
    |||| |||||||||||||||||  | |||||||||| ||||||||||||  |||| || |||| ||| |||| ||||||||    
T  34717242 ggtgaggtttagcatgggaaagctacttttttcccaccatgggaaagttagtttttgatcattagatcaaatcaagaacac 34717322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 146
Target Start/End: Complemental strand, 7635677 - 7635602
Alignment:
Q  71 gtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacaca 146  Q
    |||||||||||||||||| | ||||||||| ||||||||||||  ||||  |||||| ||| |||  |||||||||    
T  7635677 gtttagcatgggaaagactaatttttcccaccatgggaaagttagtttttaaccattagatcaaaccaagaacaca 7635602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 147
Target Start/End: Complemental strand, 16766063 - 16765981
Alignment:
Q  65 ggtggggtttagcatgggaaagacaa-ttttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaa 147  Q
    ||||||||||||||||||||||| || || ||| ||| ||||| |||||| |||||||||  || ||||||| |||||||||||    
T  16766063 ggtggggtttagcatgggaaagaaaagttgttttccaccatggaaaagttttttttggacggttagattaaa-gaagaacacaa 16765981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 209
Target Start/End: Complemental strand, 1770799 - 1770687
Alignment:
Q  97 cccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcctctaacactgaa-ttttttctcactttcttcccca 195  Q
    ||||| |||||||||||| | || | |||||||||||||| |||| |||| |||||||||| ||  |  ||| |||| ||||||| || | |||||||||    
T  1770799 cccatgatgggaaagttgatcttag-ccatttgattaaataaagagcacactcttatcatgttctccctacattgaatttttttcacattatcttcccca 1770701  T
Q  196 accattctctctcc 209  Q
    || |||||||||||    
T  1770700 acaattctctctcc 1770687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 25067898 - 25067842
Alignment:
Q  65 ggtggggtttagcatgggaaa-gacaattttttcccatcatgggaaagttgtttttg 120  Q
    ||||||||||||||||||||| || | || ||||||| ||| |||||||||||||||    
T  25067898 ggtggggtttagcatgggaaaggatatttgtttcccaccataggaaagttgtttttg 25067842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 161
Target Start/End: Original strand, 28982782 - 28982877
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcc 161  Q
    |||| |||||||||||||||| || | ||||| | ||||||||||||||  |||| ||||||| ||| |||  |||||||||  |||||||| ||||    
T  28982782 ggtgaggtttagcatgggaaa-actacttttttctatcatgggaaagttagtttttgaccattcgatcaaaccaagaacacatccttatcatactcc 28982877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000005; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 161
Target Start/End: Complemental strand, 930481 - 930385
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcc 161  Q
    |||| |||||||||||||||||  | |||||||||| ||||||||||||  |||| ||||||| ||| |||  |||||||||  |||||||| ||||    
T  930481 ggtgaggtttagcatgggaaagctacttttttcccaccatgggaaagttagtttttgaccattagatcaaaccaagaacacatccttatcatactcc 930385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 161
Target Start/End: Complemental strand, 11442203 - 11442107
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcc 161  Q
    |||| |||||||||||||||||  | |||||||||| ||||||||||||  |||| ||||||| ||| |||  |||||||||  |||||||| ||||    
T  11442203 ggtgaggtttagcatgggaaagctacttttttcccaccatgggaaagttagtttttgaccattagatcaaacaaagaacacatccttatcatactcc 11442107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 26006820 - 26006730
Alignment:
Q  71 gtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcc 161  Q
    |||||||||||||||| | | |||||||||||||| |||||||  |||| ||||||| ||| |||  |||||||||  |||||||| ||||    
T  26006820 gtttagcatgggaaaggctaatttttcccatcatgagaaagttagtttttgaccattagatcaaaccaagaacacatccttatcatactcc 26006730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 143
Target Start/End: Complemental strand, 32474510 - 32474432
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaac 143  Q
    |||| |||||||||||||||||  | |||||||||| ||||||||||||  |||| ||||||| ||| ||| |||||||    
T  32474510 ggtgaggtttagcatgggaaagctacttttttcccaccatgggaaagttagtttttgaccattagatcaaacgaagaac 32474432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 44021286 - 44021340
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgttttt 119  Q
    ||||||||||||||||||||||| | || ||||||| |||||||||||| |||||    
T  44021286 ggtggggtttagcatgggaaagaaagttgtttcccaccatgggaaagtttttttt 44021340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 50766635 - 50766727
Alignment:
Q  70 ggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcctc 163  Q
    |||||||||||||||||  | |||||||||| ||| ||||||||  |||| ||||||| ||| |||  ||||||||| ||||||||| ||||||    
T  50766635 ggtttagcatgggaaagctacttttttcccaccat-ggaaagttaatttttgaccattagatcaaaccaagaacacattcttatcatactcctc 50766727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 54901463 - 54901319
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattt-tttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcctc 163  Q
    |||||||||||| ||| |||||  ||||| ||| |||| |||||||| ||| |||||| |||||||||||||| |||| |||| | |||||||| ||       
T  54901463 ggtggggtttagaatgagaaagggaatttgttttccatgatgggaaacttgattttgg-ccatttgattaaataaagagcacactattatcatgttctca 54901365  T
Q  164 taacactgaatt-ttttctcactttcttccccaaccattctctctc 208  Q
     ||||||||||| ||||| |||| |||| || ||| ||||||||||    
T  54901364 caacactgaattattttcacactatctttccaaacaattctctctc 54901319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 161
Target Start/End: Complemental strand, 21166204 - 21166108
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcc 161  Q
    |||| |||||||||||||||||  | |||||||||| ||||||||| ||  |||| ||||||| ||| |||  |||||||||  |||||||| ||||    
T  21166204 ggtgaggtttagcatgggaaagttacttttttcccaccatgggaaaattagtttttgaccattagatcaaaccaagaacacatccttatcatactcc 21166108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 156
Target Start/End: Complemental strand, 14788648 - 14788557
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcat 156  Q
    |||| |||||| ||||||||||  | |||||||| ||||||||||||||  |||| ||||||| ||| |||  ||||| ||| |||||||||    
T  14788648 ggtgaggtttaacatgggaaagctacttttttcctatcatgggaaagttagtttttgaccattagatcaaaccaagaagacattcttatcat 14788557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 146
Target Start/End: Original strand, 20586078 - 20586153
Alignment:
Q  71 gtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacaca 146  Q
    |||||||||||||||| | | ||||||||| ||||||||||||  ||||  |||||| ||| |||| |||||||||    
T  20586078 gtttagcatgggaaaggctaatttttcccaccatgggaaagttagtttttaaccattagatcaaatcaagaacaca 20586153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 43521077 - 43521139
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatt 127  Q
    |||| |||||||||||||||||  | |||||||||| ||||||||||||  |||| |||||||    
T  43521077 ggtgaggtttagcatgggaaagctacttttttcccaccatgggaaagttagtttttgaccatt 43521139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 146
Target Start/End: Original strand, 32473761 - 32473842
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacaca 146  Q
    |||| |||||||||||||||||  | ||||||||||  |||||||||||  |||| ||||||| ||| |||  |||||||||    
T  32473761 ggtgaggtttagcatgggaaagctacttttttcccactatgggaaagttagtttttgaccattagatcaaaccaagaacaca 32473842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 46187209 - 46187290
Alignment:
Q  126 tttgattaaatgaagaacacaatcttatcatgctcctctaacact-gaattttttctcactttcttccccaaccattctctc 206  Q
    ||||||||||||||||||||  ||||| |||| || | ||||||| || ||||||| |||  ||||||| ||||||||||||    
T  46187209 tttgattaaatgaagaacactctcttaccatgttcttttaacactagatttttttcacaccatcttccctaaccattctctc 46187290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 161
Target Start/End: Original strand, 929911 - 930007
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcc 161  Q
    |||| ||||||||||||||||   | |||||||||| ||||||||||||  |||| ||||||| ||| |||  || ||||||  |||||||| ||||    
T  929911 ggtgaggtttagcatgggaaatctacttttttcccaccatgggaaagttagtttttgaccattagatcaaaccaataacacatccttatcatactcc 930007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 8327231 - 8327183
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagtt 113  Q
    ||||| |||||||||||||||||| | ||||| ||| ||||||||||||    
T  8327231 ggtggagtttagcatgggaaagactaattttttccaccatgggaaagtt 8327183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 50836216 - 50836264
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagtt 113  Q
    |||| |||||||||||||||||  | |||||||||| ||||||||||||    
T  50836216 ggtgaggtttagcatgggaaagctatttttttcccaccatgggaaagtt 50836264  T

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Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 50839637 - 50839589
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagtt 113  Q
    |||| |||||||||||||||||  | |||||||||| ||||||||||||    
T  50839637 ggtgaggtttagcatgggaaagctatttttttcccaccatgggaaagtt 50839589  T

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Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 161
Target Start/End: Complemental strand, 48594273 - 48594177
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcc 161  Q
    |||| |||||||||| ||||||  | |||||||||||||||||||||||  |||| ||||||| ||| |||  |||||||||  |||||||| ||||    
T  48594273 ggtgaggtttagcattggaaagctacttttttcccatcatgggaaagttagtttttgaccattagatcaaaccaagaacacatccttatcatactcc 48594177  T

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Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 161
Target Start/End: Complemental strand, 48598884 - 48598788
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcc 161  Q
    |||| |||||||||| ||||||  | |||||||||||||||||||||||  |||| ||||||| ||| |||  |||||||||  |||||||| ||||    
T  48598884 ggtgaggtttagcattggaaagctacttttttcccatcatgggaaagttagtttttgaccattagatcaaaccaagaacacatccttatcatactcc 48598788  T

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Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 208
Target Start/End: Complemental strand, 37423097 - 37422981
Alignment:
Q  91 ttttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctc-ctctaacactgaattttttctcactttct 189  Q
    |||||||||| |||||||||||||  |||  |||| | ||||||| ||||||||   ||||||||||| | |||| |||||||||||||| || || |||    
T  37423097 ttttttcccaccatgggaaagttgaatttctaccactagattaaacgaagaacatgttcttatcatgcactctct-acactgaattttttatc-ctatct 37423000  T
Q  190 tccccaaccattctctctc 208  Q
    |||| ||||||||||||||    
T  37422999 tccctaaccattctctctc 37422981  T

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Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 38328928 - 38328886
Alignment:
Q  71 gtttagcatgggaaagacaattttttcccatcatgggaaagtt 113  Q
    |||||||||||||||||| | ||||||||||||||||||||||    
T  38328928 gtttagcatgggaaagactaatttttcccatcatgggaaagtt 38328886  T

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Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 209
Target Start/End: Complemental strand, 42646086 - 42645943
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattt-tttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcctc 163  Q
    |||||||||||| |||||||||  || |  ||| |||| |||||||||||| | || | |||||||||||||| ||||  ||| |||||||||| || ||    
T  42646086 ggtggggtttagtatgggaaagggaagtagttttccataatgggaaagttgatcttag-ccatttgattaaataaagagtacactcttatcatgttc-tc 42645989  T
Q  164 t-aacactgaattttttctcactttcttccccaaccattctctctcc 209  Q
    | |||||||||||||| | |||| ||||||||||| |||||||||||    
T  42645988 tcaacactgaattttt-cacactatcttccccaacaattctctctcc 42645943  T

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Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 161
Target Start/End: Complemental strand, 12800519 - 12800422
Alignment:
Q  64 tggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcc 161  Q
    ||||| ||||||||||||||||   | |||||||||| ||||||||||||  |||| ||||||| ||| |||  |||||||||  |||||||| ||||    
T  12800519 tggtgaggtttagcatgggaaaactacttttttcccaccatgggaaagttagtttttgaccattagatcaaaccaagaacacatccttatcatactcc 12800422  T

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Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 161
Target Start/End: Complemental strand, 28371752 - 28371655
Alignment:
Q  64 tggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcc 161  Q
    ||||| |||||||||||||||||  | |||||||||| ||||||||||||  |||| ||||||| ||| |||  || ||||||  |||||||| ||||    
T  28371752 tggtgaggtttagcatgggaaagctacttttttcccaccatgggaaagttagtttttgaccattagatcaaaccaaaaacacatccttatcatactcc 28371655  T

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Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 168
Target Start/End: Original strand, 32537651 - 32537748
Alignment:
Q  71 gtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcctctaaca 168  Q
    ||||| |||||||||| | | ||||||||| ||||||||||||  ||||  |||||| ||| ||||||   ||||| ||||||||||||||| |||||    
T  32537651 gtttaacatgggaaaggctaatttttcccaccatgggaaagttagtttttaaccattggatcaaatgatatacacactcttatcatgctcctttaaca 32537748  T

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Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 161
Target Start/End: Original strand, 2820958 - 2821054
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcc 161  Q
    |||| |||||| ||||||||||  | |||||||||| ||||||||||||  |||| ||||||| ||| |||  |||||||||  |||||||| ||||    
T  2820958 ggtgaggtttaacatgggaaagctacttttttcccaccatgggaaagttagtttttgaccattagatcaaaccaagaacacatccttatcatactcc 2821054  T

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Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 29148223 - 29148303
Alignment:
Q  126 tttgattaaatgaagaacacaatcttatcatgctcctctaacactgaattttttctcactttcttccccaaccattctctc 206  Q
    |||||||||||||||||||   ||||| |||| || | |||||||  |||||||| |||  ||||||||||||||||||||    
T  29148223 tttgattaaatgaagaacattgtcttaccatgttcttttaacacttgattttttcacaccatcttccccaaccattctctc 29148303  T

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Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 146
Target Start/End: Original strand, 38468912 - 38468987
Alignment:
Q  71 gtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacaca 146  Q
    |||||||||||||||| | | ||||||||| ||||||||||||  ||||  ||||||  ||||||| |||||||||    
T  38468912 gtttagcatgggaaaggctaatttttcccaccatgggaaagttagtttttaaccattatattaaatcaagaacaca 38468987  T

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Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 135
Target Start/End: Original strand, 17151002 - 17151072
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaa 135  Q
    |||| ||||||||||||||||| |   ||||||||| |||||||||||| ||||| ||||| | |||||||    
T  17151002 ggtgaggtttagcatgggaaaggctggtttttcccaccatgggaaagttattttttgaccactagattaaa 17151072  T

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Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 135
Target Start/End: Complemental strand, 17151927 - 17151857
Alignment:
Q  65 ggtggggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaa 135  Q
    |||| |||||||||||||||||  | |||||| ||| ||||||||||||  |||| ||||||| |||||||    
T  17151927 ggtgaggtttagcatgggaaagctactttttttccaccatgggaaagttagtttttgaccattagattaaa 17151857  T

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Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 2687775 - 2687719
Alignment:
Q  65 ggtggggtttagcatgggaaa-gacaattttttcccatcatgggaaagttgtttttg 120  Q
    ||||||||||||||||||||| || |||| ||||||| ||||||||| || ||||||    
T  2687775 ggtggggtttagcatgggaaaggataattgtttcccaccatgggaaaattatttttg 2687719  T

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Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 145
Target Start/End: Original strand, 37179165 - 37179201
Alignment:
Q  109 aagttgtttttggaccatttgattaaatgaagaacac 145  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  37179165 aagttttttttggaccattagattaaatgaagaacac 37179201  T

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Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 157
Target Start/End: Complemental strand, 38634965 - 38634917
Alignment:
Q  109 aagttgtttttggaccatttgattaaatgaagaacacaatcttatcatg 157  Q
    ||||| ||||||||||||| |||| ||||||||||||| | ||||||||    
T  38634965 aagttttttttggaccattggattgaatgaagaacacatttttatcatg 38634917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 135
Target Start/End: Original strand, 42383720 - 42383789
Alignment:
Q  65 ggtggggtttagcatgggaaagacaa-ttttttcccatcatgggaaagttgtttttggaccatttgattaaa 135  Q
    |||||||||||| |||||||||| || || ||||| |||||||||||||| |||||  |||||| |||||||    
T  42383720 ggtggggtttagtatgggaaagagaagttgtttcctatcatgggaaagtttttttt--accattagattaaa 42383789  T

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Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 48153202 - 48153110
Alignment:
Q  70 ggtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatgctcct 162  Q
    |||||||||||||||||  | ||||||||||  |||||||||||  |||| || |||| ||| |||  |||||||||  |||||||| |||||    
T  48153202 ggtttagcatgggaaagctacttttttcccaatatgggaaagttagtttttgatcattagatcaaaccaagaacacatccttatcatactcct 48153110  T

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Target: scaffold0022 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 146
Target Start/End: Original strand, 61580 - 61655
Alignment:
Q  71 gtttagcatgggaaagacaattttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacaca 146  Q
    |||||||||||||||| | | ||||||||||||||||||||||  |||| ||||||| ||| |||  |||||||||    
T  61580 gtttagcatgggaaaggctaatttttcccatcatgggaaagttagtttttgaccattagatcaaaccaagaacaca 61655  T

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Target: scaffold0508 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 4666 - 4624
Alignment:
Q  71 gtttagcatgggaaagacaattttttcccatcatgggaaagtt 113  Q
    |||||||||||||||||| | ||||| ||||||||||||||||    
T  4666 gtttagcatgggaaagactaattttttccatcatgggaaagtt 4624  T

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Target: scaffold0180 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 157
Target Start/End: Complemental strand, 23113 - 23047
Alignment:
Q  91 ttttttcccatcatgggaaagttgtttttggaccatttgattaaatgaagaacacaatcttatcatg 157  Q
    |||||||||||||||||||||||  ||||| |||||| ||||||||   ||||| ||| ||||||||    
T  23113 ttttttcccatcatgggaaagttagttttgaaccattagattaaatagggaacataattttatcatg 23047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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