View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15182_low_62 (Length: 321)
Name: NF15182_low_62
Description: NF15182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15182_low_62 |
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Alignment Details
Target: chr2 (Bit Score: 176; Significance: 8e-95; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 103 - 306
Target Start/End: Original strand, 45088963 - 45089166
Alignment:
| Q |
103 |
aaagtcaaccacacctccacctccgtacaatctcacatagtcaacaaaccacctgacgcacctactaaaagccgaaaataataaccatgtggcatgcttc |
202 |
Q |
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| T |
45088963 |
aaagtcaaccacacctccacctccgtacaatctcacatagtcaacaaaccacctgacgcacctactaaaagccaaaaataataaccatgtggcatgcttc |
45089062 |
T |
|
| Q |
203 |
cccaaatggaagaacataaataatcataaaatacaaagaactttgtttcttgaatacataaaatagatatannnnnnnncaactaccaacttatgcacct |
302 |
Q |
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| T |
45089063 |
cccaaatggaagaacataaataatcataaaatacaaagaactttgtttcttgaatacataaaatagatatattttttttcaactaccaacttatgcacct |
45089162 |
T |
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| Q |
303 |
cctt |
306 |
Q |
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|||| |
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| T |
45089163 |
cctt |
45089166 |
T |
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