View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15182_low_69 (Length: 307)

Name: NF15182_low_69
Description: NF15182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15182_low_69
NF15182_low_69
[»] chr1 (11 HSPs)
chr1 (3-288)||(52596150-52596436)
chr1 (49-160)||(22593650-22593762)
chr1 (60-160)||(15188584-15188684)
chr1 (85-160)||(35926677-35926752)
chr1 (31-160)||(28736211-28736340)
chr1 (9-78)||(11337429-11337497)
chr1 (9-78)||(11495448-11495516)
chr1 (114-160)||(20003997-20004043)
chr1 (42-152)||(35058539-35058649)
chr1 (25-160)||(30418334-30418470)
chr1 (42-122)||(2774203-2774283)
[»] chr8 (9 HSPs)
chr8 (18-160)||(32467776-32467917)
chr8 (42-160)||(24523838-24523955)
chr8 (42-158)||(35764540-35764656)
chr8 (59-158)||(18892301-18892400)
chr8 (42-160)||(28444786-28444904)
chr8 (42-160)||(41470034-41470152)
chr8 (42-154)||(14354542-14354654)
chr8 (42-157)||(8172947-8173062)
chr8 (19-64)||(21367297-21367342)
[»] chr3 (12 HSPs)
chr3 (24-160)||(37083777-37083913)
chr3 (19-160)||(9198198-9198339)
chr3 (59-160)||(32326157-32326258)
chr3 (22-160)||(32109443-32109581)
chr3 (61-160)||(38684775-38684874)
chr3 (19-93)||(11041915-11041989)
chr3 (42-160)||(44560132-44560249)
chr3 (105-160)||(20873209-20873264)
chr3 (3-57)||(32582358-32582411)
chr3 (9-65)||(25290320-25290376)
chr3 (10-57)||(33674623-33674670)
chr3 (19-89)||(32117764-32117834)
[»] chr2 (12 HSPs)
chr2 (11-157)||(27678990-27679136)
chr2 (19-132)||(42139310-42139423)
chr2 (3-157)||(44809877-44810030)
chr2 (3-159)||(35189212-35189369)
chr2 (7-150)||(38808956-38809100)
chr2 (35-119)||(15967753-15967837)
chr2 (21-93)||(18491516-18491588)
chr2 (37-158)||(13463323-13463444)
chr2 (25-90)||(15804359-15804424)
chr2 (102-158)||(44810067-44810123)
chr2 (17-64)||(25727140-25727187)
chr2 (17-63)||(17489908-17489954)
[»] chr5 (17 HSPs)
chr5 (26-158)||(22028640-22028772)
chr5 (40-160)||(16869956-16870076)
chr5 (12-158)||(6462407-6462561)
chr5 (3-89)||(31811987-31812073)
chr5 (19-112)||(29226455-29226548)
chr5 (9-93)||(31806802-31806886)
chr5 (61-160)||(4283067-4283166)
chr5 (42-160)||(28363382-28363500)
chr5 (3-93)||(13838935-13839024)
chr5 (47-118)||(3540780-3540851)
chr5 (21-160)||(17259379-17259517)
chr5 (70-160)||(1621560-1621650)
chr5 (42-156)||(2941875-2941988)
chr5 (9-88)||(32046782-32046860)
chr5 (102-160)||(9004829-9004887)
chr5 (107-156)||(41892918-41892967)
chr5 (9-57)||(6035758-6035806)
[»] scaffold0040 (1 HSPs)
scaffold0040 (31-160)||(49910-50039)
[»] chr4 (16 HSPs)
chr4 (17-152)||(23051682-23051817)
chr4 (11-160)||(20988824-20988974)
chr4 (53-160)||(21501576-21501683)
chr4 (3-84)||(44555780-44555861)
chr4 (42-160)||(52831403-52831521)
chr4 (43-156)||(39276304-39276417)
chr4 (42-149)||(1162165-1162272)
chr4 (37-160)||(3535112-3535234)
chr4 (3-68)||(30071594-30071659)
chr4 (25-156)||(30070077-30070205)
chr4 (25-93)||(39033490-39033558)
chr4 (117-160)||(24418249-24418292)
chr4 (28-79)||(50130922-50130973)
chr4 (42-76)||(24474050-24474084)
chr4 (102-160)||(44555716-44555774)
chr4 (25-93)||(41963462-41963530)
[»] chr7 (2 HSPs)
chr7 (27-121)||(12473544-12473638)
chr7 (20-91)||(42967689-42967760)
[»] chr6 (3 HSPs)
chr6 (3-156)||(9195412-9195565)
chr6 (10-158)||(29052160-29052307)
chr6 (60-121)||(2255202-2255263)
[»] scaffold0010 (1 HSPs)
scaffold0010 (42-160)||(166540-166656)
[»] scaffold0536 (1 HSPs)
scaffold0536 (1-65)||(4296-4360)


Alignment Details
Target: chr1 (Bit Score: 267; Significance: 1e-149; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 3 - 288
Target Start/End: Complemental strand, 52596436 - 52596150
Alignment:
Q  3 tgtttagtaagacatgtttttgagcttatagctaatgtgttataagctcatttgattaaaaaa-gacctgtttggtaaccgtcactttctcaggaactat 101  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  52596436 tgtttggtaagacatgtttttgagcttatagataatgtgttataagctcatttgattaaaaaaagacctgtttggtaaccgtcattttctcaggaactat 52596337  T
Q  102 tagcttatttttactagcttaaagcggtttttgatgagctgattcaagtagcttatagcggttagtggtatgaggtacaatgtaagctagattactgagt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52596336 tagcttatttttactagcttaaagcggtttttgatgagctgattcaagtagcttatagcggttagtggtatgaggtacaatgtaagctagattactgagt 52596237  T
Q  202 ttggcgaatagagcattaaattataatgaagtagagaaatgagaatgaggaaaagatgcatgcaatttaaggaagaatgaaatactt 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52596236 ttggcgaatagagcattaaattataatgaagtagagaaatgagaatgaggaaaagatgcatgcaatttaaggaagaatgaaatactt 52596150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 160
Target Start/End: Complemental strand, 22593762 - 22593650
Alignment:
Q  49 ctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaagcggttttt-gatgagctgattca 147  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||| || |   |||||||||||||  |||||| ||| |||||| ||| |||| |||||    
T  22593762 ctcattttattaaaaaagaccagtttggtaaccgtcactttctcacgagcctgtagcttatttttatcagcttatagcagtttttcgataagctaattca 22593663  T
Q  148 agtagcttatagc 160  Q
    |||||||||||||    
T  22593662 agtagcttatagc 22593650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 160
Target Start/End: Complemental strand, 15188684 - 15188584
Alignment:
Q  60 aaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaagcggtttttgatgagctgattcaagtagcttatag 159  Q
    |||||| ||||||||||||| | ||||||||||| || ||| |||||||||||||  |||||| |||  || |||| ||||| |||||||||||||||||    
T  15188684 aaaaaaaacctgtttggtaatcatcactttctcatgagctaatagcttatttttataagcttatagcatttcttgacgagctaattcaagtagcttatag 15188585  T
Q  160 c 160  Q
    |    
T  15188584 c 15188584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 160
Target Start/End: Complemental strand, 35926752 - 35926677
Alignment:
Q  85 actttctcaggaactattagcttatttttactagcttaaagcggtttttgatgagctgattcaagtagcttatagc 160  Q
    ||||||||| || ||  ||||||||||||||||||||  || | |||||||| |||||||||||||||||||||||    
T  35926752 actttctcacgagcttatagcttatttttactagcttgtagtgttttttgataagctgattcaagtagcttatagc 35926677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 160
Target Start/End: Complemental strand, 28736340 - 28736211
Alignment:
Q  31 tagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaagcggtt 130  Q
    ||||| |||| |||||||||||||||| ||||||||||| |  |||||||||||| ||| |||  | ||   ||||||||||||| | |||| |||  ||    
T  28736340 tagcttatgtcttataagctcatttgactaaaaaagaccagcctggtaaccgtcattttttcacaagcttacagcttatttttaccaacttatagcattt 28736241  T
Q  131 tttgatgagctgattcaagtagcttatagc 160  Q
    || ||| |||| ||||||||||| ||||||    
T  28736240 ttagataagctaattcaagtagcgtatagc 28736211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 11337497 - 11337429
Alignment:
Q  9 gtaagacatgtttttgagcttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggta 78  Q
    ||||||| | ||||||||||||||||| |||| |||||||||||||| | | |||| |||||||||||||    
T  11337497 gtaagacttatttttgagcttatagcttatgtcttataagctcatttaact-aaaacgacctgtttggta 11337429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 11495516 - 11495448
Alignment:
Q  9 gtaagacatgtttttgagcttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggta 78  Q
    ||||||| | ||||||||||||||||| |||| |||||||||||||| | | |||| |||||||||||||    
T  11495516 gtaagacttatttttgagcttatagcttatgtcttataagctcatttaact-aaaacgacctgtttggta 11495448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 20003997 - 20004043
Alignment:
Q  114 actagcttaaagcggtttttgatgagctgattcaagtagcttatagc 160  Q
    ||||||||| |||| |||||||| |||| ||||||||||||||||||    
T  20003997 actagcttatagcgttttttgataagctaattcaagtagcttatagc 20004043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 35058539 - 35058649
Alignment:
Q  42 ttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaagcggtttttgatgagct 141  Q
    |||||||||| | ||| |||| | |||| |||||||||| |||| || |||| || ||  ||||||||||||||  ||||| ||||||||||  | ||||    
T  35058539 ttataagctcgtatgactaaagatgacccgtttggtaacagtcatttgctcacgagcttatagcttatttttacgggcttatagcggtttttagtaagct 35058638  T
Q  142 gattcaagtag 152  Q
     ||||||||||    
T  35058639 aattcaagtag 35058649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 160
Target Start/End: Original strand, 30418334 - 30418470
Alignment:
Q  25 agcttatagctaatgtgttataagctcatttgattaaaaaa---gacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagctt 121  Q
    ||||||||||| |  | ||||||||||||||||| ||||||   |||| ||||||||||| |||| ||||||  | ||  |||||  |||||||||||||    
T  30418334 agcttatagcttacatcttataagctcatttgataaaaaaaaaagacccgtttggtaaccatcacattctcacaagcttatagct--tttttactagctt 30418431  T
Q  122 aaagcggtttttgatgagctgattcaagtagcttatagc 160  Q
      |||| |||| ||| || | || |||||||||||||||    
T  30418432 gtagcgtttttggataagttaatccaagtagcttatagc 30418470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 2774203 - 2774283
Alignment:
Q  42 ttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagctta 122  Q
    |||||||||||| ||| ||||||||||   |||||||||||||  ||| ||| || ||  || ||||||||||||||||||    
T  2774203 ttataagctcatatgactaaaaaagactcatttggtaaccgtctttttttcatgagcttataacttatttttactagctta 2774283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 1e-34; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 160
Target Start/End: Complemental strand, 32467917 - 32467776
Alignment:
Q  18 gtttttgagcttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttacta 117  Q
    |||||||||||||||||| |||| |||||||||||||||| ||||||||||||| |||||||||||||||| |||  || ||  ||||||||||||||||    
T  32467917 gtttttgagcttatagcttatgtcttataagctcatttgactaaaaaagacctgattggtaaccgtcacttcctcgtgagcttatagcttatttttacta 32467818  T
Q  118 gcttaaagcggtttttgatgagctgattcaagtagcttatagc 160  Q
    ||||| ||  ||||||||| |||  ||||||||||||||||||    
T  32467817 gcttatagtcgtttttgataagc-aattcaagtagcttatagc 32467776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 24523955 - 24523838
Alignment:
Q  42 ttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaagcggtttttgatgagct 141  Q
    ||||||| ||||||||||||||| |||  ||||| ||||||||||||||| |  | ||  || |||||||||||||||||| || ||||||||||  |||    
T  24523955 ttataagttcatttgattaaaaa-gactagtttgctaaccgtcactttctaacaagcttataacttatttttactagcttagagaggtttttgatatgct 24523857  T
Q  142 gattcaagtagcttatagc 160  Q
    |||||||||||||||||||    
T  24523856 gattcaagtagcttatagc 24523838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 158
Target Start/End: Original strand, 35764540 - 35764656
Alignment:
Q  42 ttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaagcggtttttgatgagct 141  Q
    |||||||||||||| |||||||||||| ||| |||||||| ||||||||| | || ||  |||||||||||||| |||||  | || ||||| || ||||    
T  35764540 ttataagctcatttaattaaaaaagacatgtctggtaaccatcactttcttatgagcttatagcttatttttacaagcttgtaacgtttttttataagct 35764639  T
Q  142 gattcaagtagcttata 158  Q
     |||||||||| |||||    
T  35764640 aattcaagtaggttata 35764656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 18892400 - 18892301
Alignment:
Q  59 taaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaagcggtttttgatgagctgattcaagtagcttata 158  Q
    |||||||||||||||| |||||||||| |||| || || ||   | ||||| |||||||||||| |||| ||| |||| |||| ||||||||||||||||    
T  18892400 taaaaaagacctgtttcgtaaccgtcattttcacacgagcttccaacttatatttactagcttatagcgctttctgataagctaattcaagtagcttata 18892301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 28444904 - 28444786
Alignment:
Q  42 ttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaagcggtttttgatgagct 141  Q
    |||||||||| | ||||||||||| ||||||||||||||  ||| |||  || || ||  |||||||||||||  |||||| || || ||||||| ||||    
T  28444904 ttataagctcgtatgattaaaaaatacctgtttggtaactctcatttttacaagagcttatagcttatttttatgagcttagagagggttttgataagct 28444805  T
Q  142 gattcaagtagcttatagc 160  Q
     ||| ||||||||||||||    
T  28444804 aatttaagtagcttatagc 28444786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 41470034 - 41470152
Alignment:
Q  42 ttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaagcggtttttgatgagct 141  Q
    |||||||||||| | | ||||||||||| |||||||||| |||| ||||||| || ||  || |||| ||||||||||| | || | ||||| || ||||    
T  41470034 ttataagctcatataactaaaaaagacccgtttggtaactgtcattttctcacgagcttataacttaattttactagctcatagtgtttttttataagct 41470133  T
Q  142 gattcaagtagcttatagc 160  Q
     | ||||||||||||||||    
T  41470134 aactcaagtagcttatagc 41470152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 14354654 - 14354542
Alignment:
Q  42 ttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaagcggtttttgatgagct 141  Q
    |||||||||||| ||| |||||||||||  ||||||||| |||  |||||   || ||| ||| ||||||||||||||||| |||| ||||| || |||     
T  14354654 ttataagctcatatgactaaaaaagacccatttggtaacagtcgttttctgtcgagctaatagtttatttttactagcttatagcgtttttttataagcc 14354555  T
Q  142 gattcaagtagct 154  Q
     | ||||||||||    
T  14354554 aactcaagtagct 14354542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 157
Target Start/End: Complemental strand, 8173062 - 8172947
Alignment:
Q  42 ttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaagcggtttttgatgagct 141  Q
    |||||||||||| ||| |||||||||||  ||||||||| |||| ||||  | || | | ||| ||||||||||||| ||| |||| ||| |||  |||     
T  8173062 ttataagctcatatgactaaaaaagaccgatttggtaacagtcattttcggaagagcaaatagtttatttttactagattatagcgttttctgaaaagcc 8172963  T
Q  142 gattcaagtagcttat 157  Q
     |||||||||||||||    
T  8172962 aattcaagtagcttat 8172947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 21367342 - 21367297
Alignment:
Q  19 tttttgagcttatagctaatgtgttataagctcatttgattaaaaa 64  Q
    ||||||||||||||||| |||| |||||||||| | ||||||||||    
T  21367342 tttttgagcttatagctgatgtcttataagctcgtatgattaaaaa 21367297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 37083777 - 37083913
Alignment:
Q  24 gagcttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaa 123  Q
    |||||||||||| |||| |||||||||||||||||||||||||||  ||| |||||| |||||||||||| || ||  |||||||||||||||||||||     
T  37083777 gagcttatagcttatgtcttataagctcatttgattaaaaaagacacgttaggtaactgtcactttctcacgagcttatagcttatttttactagcttat 37083876  T
Q  124 agcggtttttgatgagctgattcaagtagcttatagc 160  Q
    |||  ||||| || |||| ||||||||||||||||||    
T  37083877 agcaatttttaataagctaattcaagtagcttatagc 37083913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 9198339 - 9198198
Alignment:
Q  19 tttttgagcttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactag 118  Q
    ||||||||||||||||| || |  | ||||||| ||| | ||||||||||| |||| |||||||||||||||||| || ||   ||||||||||||||||    
T  9198339 tttttgagcttatagcttatatcctttaagctctttttactaaaaaagacccgtttagtaaccgtcactttctcacgagcttaaagcttatttttactag 9198240  T
Q  119 cttaaagcggtttttgatgagctgattcaagtagcttatagc 160  Q
    |||| ||||||||||||| |||| ||||||||||||| ||||    
T  9198239 cttatagcggtttttgataagctaattcaagtagcttttagc 9198198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 160
Target Start/End: Complemental strand, 32326258 - 32326157
Alignment:
Q  59 taaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaagcggtttttgatgagctgattcaagtagcttata 158  Q
    ||||||||||| |||||||| ||||||||||||||  | ||  ||||||||||||||||||||| || |||||||||| |||| ||||||||||||||||    
T  32326258 taaaaaagacccgtttggtatccgtcactttctcacaagcttgtagcttatttttactagcttatagaggtttttgataagctaattcaagtagcttata 32326159  T
Q  159 gc 160  Q
    ||    
T  32326158 gc 32326157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 160
Target Start/End: Original strand, 32109443 - 32109581
Alignment:
Q  22 ttgagcttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagctt 121  Q
    |||||||||||||| ||||  |||| |||||||||| |  ||||||| |||||| |||| ||||||||| || || ||  |||||||||||||  |||||    
T  32109443 ttgagcttatagcttatgtcctatatgctcatttgactcgaaaagacatgtttgataactgtcactttcccatgagcttatagcttatttttaaaagctt 32109542  T
Q  122 aaagcggtttttgatgagctgattcaagtagcttatagc 160  Q
    |||||  |||||||| |||| ||||||||||||||||||    
T  32109543 aaagcaatttttgataagctaattcaagtagcttatagc 32109581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 61 - 160
Target Start/End: Complemental strand, 38684874 - 38684775
Alignment:
Q  61 aaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaagcggtttttgatgagctgattcaagtagcttatagc 160  Q
    ||||||| | ||||||||||||||| |||||||||| ||  ||  ||||||||||||||||| |||| |||||||| |||| ||||||||||||||||||    
T  38684874 aaaaagatccgtttggtaaccgtcattttctcaggagcttgtaaattatttttactagcttatagcgttttttgataagctaattcaagtagcttatagc 38684775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 11041915 - 11041989
Alignment:
Q  19 tttttgagcttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctca 93  Q
    ||||||| ||||||||| |||| |||||||||||||||| ||||||| | ||||||  |||| ||||||||||||    
T  11041915 tttttgaacttatagcttatgtcttataagctcatttgactaaaaaaaaactgtttcataacagtcactttctca 11041989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 44560132 - 44560249
Alignment:
Q  42 ttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaagcggtttttgatgagct 141  Q
    ||||||| |||| ||| |||||||||| |||||||||||||||| ||||||| ||  |  ||  |||||||||||| | ||||| | |||||||| ||||    
T  44560132 ttataagttcatatgactaaaaaagacatgtttggtaaccgtcattttctcacgagtttataatttatttttactatcctaaagtgttttttgataagct 44560231  T
Q  142 gattcaagtagcttatagc 160  Q
     |||| |||||||||||||    
T  44560232 aattc-agtagcttatagc 44560249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 160
Target Start/End: Complemental strand, 20873264 - 20873209
Alignment:
Q  105 cttatttttactagcttaaagcggtttttgatgagctgattcaagtagcttatagc 160  Q
    |||||||||||||||||| || |||||||||| |||| ||||||||| ||||||||    
T  20873264 cttatttttactagcttatagtggtttttgataagctaattcaagtaacttatagc 20873209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 32582358 - 32582411
Alignment:
Q  3 tgtttagtaagacatgtttttgagcttatagctaatgtgttataagctcatttga 57  Q
    ||||| ||||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  32582358 tgtttggtaagacatgtttttga-cttatagcttatgtcttataagctcatttga 32582411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 25290376 - 25290320
Alignment:
Q  9 gtaagacatgtttttgagcttatagctaatgtgttataagctcatttgattaaaaaa 65  Q
    |||||||||  |||||||||||||||| |||| ||||| |||||||||| |||||||    
T  25290376 gtaagacataattttgagcttatagcttatgtcttatatgctcatttgactaaaaaa 25290320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 33674670 - 33674623
Alignment:
Q  10 taagacatgtttttgagcttatagctaatgtgttataagctcatttga 57  Q
    ||||||||||||||||||||||| || |||| || |||||||||||||    
T  33674670 taagacatgtttttgagcttataccttatgtcttgtaagctcatttga 33674623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 32117764 - 32117834
Alignment:
Q  19 tttttgagcttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcacttt 89  Q
    ||||||||| ||||||| ||||  ||||||||||||| | || |||||||| | || ||||||||||||||    
T  32117764 tttttgagcatatagcttatgtcctataagctcatttaactagaaaagacccgctttgtaaccgtcacttt 32117834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 4e-32; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 27678990 - 27679136
Alignment:
Q  11 aagacatgtttttgagcttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatt 110  Q
    ||||||| ||||||||||||||||| |||| ||||||||||||||||  ||||||||||||||   |||| ||||| |||||| || ||  |||||||||    
T  27678990 aagacatatttttgagcttatagcttatgtcttataagctcatttgagcaaaaaagacctgttcaataacggtcacattctcacgagcttatagcttatt 27679089  T
Q  111 tttactagcttaaagcggtttttgatgagctgattcaagtagcttat 157  Q
    |||||||||||| |||| ||||| || |||| |||||||||||||||    
T  27679090 tttactagcttatagcgttttttaataagctaattcaagtagcttat 27679136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 132
Target Start/End: Original strand, 42139310 - 42139423
Alignment:
Q  19 tttttgagcttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactag 118  Q
    |||||||||||| |||| |||| |||||||||||||||| ||||||| || ||||||||||  ||||||||||||  | ||  ||||||||||||| |||    
T  42139310 tttttgagcttaaagcttatgtcttataagctcatttgactaaaaaatacatgtttggtaattgtcactttctcacaagcttatagcttatttttattag 42139409  T
Q  119 cttaaagcggtttt 132  Q
    |||| |||||||||    
T  42139410 cttatagcggtttt 42139423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 157
Target Start/End: Complemental strand, 44810030 - 44809877
Alignment:
Q  3 tgtttagtaagacatgtttttgagcttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactatt 102  Q
    ||||| ||||| |||||||| |||||||||||  |||| |||||||||||||||| |||||||| || |||||||||  |||||||| ||| || ||  |    
T  44810030 tgtttggtaaggcatgttttcgagcttatagcctatgtcttataagctcatttgactaaaaaaggccggtttggtaatggtcactttttcatgagcttat 44809931  T
Q  103 agcttatttt-tactagcttaaagcggtttttgatgagctgattcaagtagcttat 157  Q
    |||| ||||| ||  |||||| |||||||| |||| |||| |||||||||||||||    
T  44809930 agctaattttgta--agcttatagcggtttgtgataagctaattcaagtagcttat 44809877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 35189212 - 35189369
Alignment:
Q  3 tgtttagtaagacatgtttttgagcttatagctaatgtgttataagctcatttgattaaaaaagac-ctgtttggtaaccgtcactttctcaggaactat 101  Q
    ||||| ||||||||| ||| |||||||||  || |||| || |||||||||||||||||||||||| |  ||||||||  ||| || ||||| || ||      
T  35189212 tgtttggtaagacatatttatgagcttatttcttatgtcttgtaagctcatttgattaaaaaagactccatttggtaattgtcgctctctcacgagctta 35189311  T
Q  102 tagcttatttttactagcttaaagcggtttttgatgagctgattcaagtagcttatag 159  Q
     ||||| |||||||||||||| | || |||||||| |||| |||| ||||||||||||    
T  35189312 aagcttgtttttactagcttataacgatttttgataagctaattcgagtagcttatag 35189369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 150
Target Start/End: Complemental strand, 38809100 - 38808956
Alignment:
Q  7 tagtaagacatgtttttgagctta-tagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagc 105  Q
    |||||| ||||  ||||||||||| ||||| |||| ||||||||| | |||  | |||||||||||||||||||| ||||||||||||  | ||  ||||    
T  38809100 tagtaatacataattttgagcttaatagcttatgtcttataagcttaattggatgaaaaagacctgtttggtaactgtcactttctcacaagcttatagc 38809001  T
Q  106 ttatttttactagcttaaagcggtttttgatgagctgattcaagt 150  Q
    ||| ||||||||||||| |||| ||| |||| |||| || |||||    
T  38809000 ttaattttactagcttatagcgttttatgataagctaatccaagt 38808956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 15967753 - 15967837
Alignment:
Q  35 taatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagc 119  Q
    |||||| |||||||||||||||| ||||||||||| |||||||||  |||||||||| |  | ||  ||||||||||||||||||    
T  15967753 taatgtcttataagctcatttgactaaaaaagacccgtttggtaaatgtcactttcttataagcttatagcttatttttactagc 15967837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 18491516 - 18491588
Alignment:
Q  21 tttgagcttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctca 93  Q
    |||||| |||||||| |||| |||||||||||||||| |||| |||||| | ||||||||||||| |||||||    
T  18491516 tttgagtttatagcttatgtcttataagctcatttgactaaacaagacccgattggtaaccgtcattttctca 18491588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 158
Target Start/End: Original strand, 13463323 - 13463444
Alignment:
Q  37 atgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaagcggtttttgat 136  Q
    |||| |||||||||| ||||| |||||| |||| ||||  ||| |||||||||||||  ||||  ||||||||| |||||| |||| || | | ||||||    
T  13463323 atgtcttataagctcgtttgaataaaaaggacccgtttaataaacgtcactttctcacaaacttatagcttattcttactatcttatagtgttgtttgat 13463422  T
Q  137 gagctgattcaagtagcttata 158  Q
     | || ||||||||||||||||    
T  13463423 aaactaattcaagtagcttata 13463444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 15804359 - 15804424
Alignment:
Q  25 agcttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttc 90  Q
    ||||||||| | |||| ||||| |||||||||| ||||||||||| |||||||||  |||||||||    
T  15804359 agcttatagtttatgtcttataggctcatttgactaaaaaagaccagtttggtaattgtcactttc 15804424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 44810067 - 44810123
Alignment:
Q  102 tagcttatttttactagcttaaagcggtttttgatgagctgattcaagtagcttata 158  Q
    ||||||||||||||||||||  |||| ||||| || |||| ||||||||||||||||    
T  44810067 tagcttatttttactagcttttagcgttttttaataagctaattcaagtagcttata 44810123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 25727187 - 25727140
Alignment:
Q  17 tgtttttgagcttatagctaatgtgttataagctcatttgattaaaaa 64  Q
    |||||||||||||||| || |||| |||||||||||||||| ||||||    
T  25727187 tgtttttgagcttataacttatgttttataagctcatttgactaaaaa 25727140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 17489954 - 17489908
Alignment:
Q  17 tgtttttgagcttatagctaatgtgttataagctcatttgattaaaa 63  Q
    ||||||||||||||||||| || | |||||||||||||||| |||||    
T  17489954 tgtttttgagcttatagcttatatcttataagctcatttgactaaaa 17489908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 158
Target Start/End: Original strand, 22028640 - 22028772
Alignment:
Q  26 gcttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaag 125  Q
    ||||||||||  ||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||  | ||  |||||||||||||||| |||| ||    
T  22028640 gcttatagcttttgtcttataagctcatttgactaaaaaagacccgtttggtaaccgtcactttctcacaagcttatagcttatttttactaacttacag 22028739  T
Q  126 cggtttttgatgagctgattcaagtagcttata 158  Q
     ||||| |||| |||| ||||||| ||||||||    
T  22028740 aggtttctgataagctaattcaagcagcttata 22028772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 40 - 160
Target Start/End: Complemental strand, 16870076 - 16869956
Alignment:
Q  40 tgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaagcggtttttgatgag 139  Q
    |||||| ||||||||||| ||||||| |||| ||||||| |  ||||||||||| |||||  || |||||||||||||||||| |||| |||||||| ||    
T  16870076 tgttattagctcatttgactaaaaaatacctttttggtatctatcactttctcacgaacttataccttatttttactagcttatagcgttttttgataag 16869977  T
Q  140 ctgattcaagtagcttatagc 160  Q
    || ||||||||||||||||||    
T  16869976 ctaattcaagtagcttatagc 16869956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 12 - 158
Target Start/End: Complemental strand, 6462561 - 6462407
Alignment:
Q  12 agacatgtttttgagcttatagcta-------atgtgttataa-gctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactatta 103  Q
    |||||||||||||||||||||||||       |||| |||||| |||||||||| ||||||||| |  |||||||||||| ||||||||   | ||  ||    
T  6462561 agacatgtttttgagcttatagctattagcttatgtcttataaagctcatttgactaaaaaagaaccatttggtaaccgttactttctcgcaagcttata 6462462  T
Q  104 gcttatttttactagcttaaagcggtttttgatgagctgattcaagtagcttata 158  Q
    ||||||||||||||||||| || |||||||||| |||| ||||||||||||||||    
T  6462461 gcttatttttactagcttatagtggtttttgataagctaattcaagtagcttata 6462407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 31811987 - 31812073
Alignment:
Q  3 tgtttagtaagacatgtttttgagcttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcacttt 89  Q
    ||||| ||||||||||||||| ||||||||||| |||| |||||||||||||||| ||||| ||||| ||||||||||| |||||||    
T  31811987 tgtttggtaagacatgttttttagcttatagcttatgtcttataagctcatttgactaaaacagacccgtttggtaaccttcacttt 31812073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 29226548 - 29226455
Alignment:
Q  19 tttttgagcttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttt 112  Q
    ||||||||||||||||  |||| |||||  ||||||||| |||||||||| |||||| ||||||||||||||||| ||| |  |||||||||||    
T  29226548 tttttgagcttatagcatatgtcttatatactcatttgactaaaaaagacatgtttgataaccgtcactttctcatgaagtcatagcttatttt 29226455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 31806886 - 31806802
Alignment:
Q  9 gtaagacatgtttttgagcttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctca 93  Q
    |||||||||  |||||||||| ||||| |||| ||||| |||||||| ||| |||||||| |||||||||||| ||| |||||||    
T  31806886 gtaagacataattttgagcttctagcttatgtcttatatgctcattttatttaaaaagacatgtttggtaaccatcaatttctca 31806802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 160
Target Start/End: Original strand, 4283067 - 4283166
Alignment:
Q  61 aaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaagcggtttttgatgagctgattcaagtagcttatagc 160  Q
    |||||||| |||||||||||||||| | ||||| || ||  ||||||||||||||| ||||| | |  |||||||| |||| |||||| |||||||||||    
T  4283067 aaaaagacatgtttggtaaccgtcattctctcacgagcttatagcttatttttactggcttataccattttttgataagctaattcaaatagcttatagc 4283166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 28363382 - 28363500
Alignment:
Q  42 ttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaagcg-gtttttgatgagc 140  Q
    |||||||||||||||| || ||||||| ||||||| ||||||||||||||||  | ||  ||||||| ||||||| ||||| ||||  ||||| || |||    
T  28363382 ttataagctcatttgactataaaagacttgtttggcaaccgtcactttctcacaagcttatagctta-ttttactggcttatagcgttttttttataagc 28363480  T
Q  141 tgattcaagtagcttatagc 160  Q
    | | ||||||||||||||||    
T  28363481 taactcaagtagcttatagc 28363500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 13839024 - 13838935
Alignment:
Q  3 tgtttagtaagacatgtttttgagcttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctca 93  Q
    ||||| ||| |||||||||||||||||| || | || | |||||||||||||||| ||||||| ||| |||| ||||| ||||||||||||    
T  13839024 tgtttggtatgacatgtttttgagcttacagtttatctcttataagctcatttgactaaaaaaaacccgttt-gtaactgtcactttctca 13838935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 3540851 - 3540780
Alignment:
Q  47 agctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactag 118  Q
    ||||||||||||||||||| || ||||||||||||| |||||| ||| |||||  ||  |||||||||||||    
T  3540851 agctcatttgattaaaaaaaacttgtttggtaaccgccactttatcacgaacttataatttatttttactag 3540780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 160
Target Start/End: Original strand, 17259379 - 17259517
Alignment:
Q  21 tttgagcttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagct 120  Q
    ||||||||||||||| |||| ||||||||||| |||  | ||||||||| |||||||||||||| |||||  | || ||   || |||| || |||||||    
T  17259379 tttgagcttatagcttatgtcttataagctcaattggct-aaaaagacccgtttggtaaccgtcgctttcatacgagcttaaagattatattcactagct 17259477  T
Q  121 taaagcggtttttgatgagctgattcaagtagcttatagc 160  Q
    || |||| ||||| || || | |||||||||| |||||||    
T  17259478 tatagcgtttttttataagttaattcaagtagattatagc 17259517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 160
Target Start/End: Complemental strand, 1621650 - 1621560
Alignment:
Q  70 tgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaagcggtttttgatgagctgattcaagtagcttatagc 160  Q
    |||||||||||||||| || |||| || ||  |||||||||||||   ||||  |||| |||||||| |||| ||||||||||||||||||    
T  1621650 tgtttggtaaccgtcatttcctcaagagcttatagcttatttttatgtgcttttagcgttttttgataagctaattcaagtagcttatagc 1621560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 156
Target Start/End: Original strand, 2941875 - 2941988
Alignment:
Q  42 ttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaagcggtttttgatgagct 141  Q
    |||||||||||||||| ||||||| ||| |||||||||||| || ||| ||| || |   |||||||||||||||||||||  ||  |||||||| ||||    
T  2941875 ttataagctcatttgactaaaaaacacccgtttggtaaccgcca-tttgtcatgagcatatagcttatttttactagcttattgcattttttgataagct 2941973  T
Q  142 gattcaagtagctta 156  Q
     || ||| |||||||    
T  2941974 aatccaaatagctta 2941988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 32046782 - 32046860
Alignment:
Q  9 gtaagacatgtttttgagcttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactt 88  Q
    |||||||||  || ||||||||||||| |||||||| ||||||||| || ||||||| | || |||||||||||| ||||    
T  32046782 gtaagacataattctgagcttatagcttatgtgttaaaagctcattagactaaaaaata-ctctttggtaaccgtgactt 32046860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 9004829 - 9004887
Alignment:
Q  102 tagcttatttttactagcttaaagcggtttttgatgagctgattcaagtagcttatagc 160  Q
    ||||||||||| |  |||||| | ||||||||||| |||| ||||||||||||||||||    
T  9004829 tagcttattttcatgagcttatatcggtttttgataagctaattcaagtagcttatagc 9004887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 41892967 - 41892918
Alignment:
Q  107 tatttttactagcttaaagcggtttttgatgagctgattcaagtagctta 156  Q
    |||||||||||||||| ||||  ||||||| |||| ||||||||||||||    
T  41892967 tatttttactagcttatagcgtgttttgataagctaattcaagtagctta 41892918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 6035758 - 6035806
Alignment:
Q  9 gtaagacatgtttttgagcttatagctaatgtgttataagctcatttga 57  Q
    ||||||||| |||||||||||| |||| |||  ||||||||||||||||    
T  6035758 gtaagacatatttttgagcttacagcttatgacttataagctcatttga 6035806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 31 - 160
Target Start/End: Complemental strand, 50039 - 49910
Alignment:
Q  31 tagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaagcggtt 130  Q
    ||||| |||| |||| | ||||||||| ||||||||||| |||||||||| |||||||||||| || ||  |||||||||||||  |||||| |||||||    
T  50039 tagcttatgtcttattaactcatttgactaaaaaagacccgtttggtaacggtcactttctcacgagcttatagcttatttttaagagcttatagcggtt 49940  T
Q  131 tttgatgagctgattcaagtagcttatagc 160  Q
    | |||| |||| ||||||||||||||||||    
T  49939 tgtgataagctaattcaagtagcttatagc 49910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 23051817 - 23051682
Alignment:
Q  17 tgtttttgagcttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttact 116  Q
    ||||||||||||||||| | |||| |||||||| ||||||| |||||| ||||||||||||||| |||||||||||| || ||   ||||||||||||      
T  23051817 tgtttttgagcttatagtttatgtcttataagcccatttgactaaaaaggacctgtttggtaacagtcactttctcacgagcttacagcttatttttatg 23051718  T
Q  117 agcttaaagcggtttttgatgagctgattcaagtag 152  Q
    || ||| |||||||| |||| |||| ||||||||||    
T  23051717 agtttatagcggtttgtgataagctaattcaagtag 23051682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 11 - 160
Target Start/End: Complemental strand, 20988974 - 20988824
Alignment:
Q  11 aagacatgtttttgagcttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactat-tagcttat 109  Q
    |||||| ||| ||| ||||||| || |||| |||||||||||||||| ||||||||||  ||||||||||||||||||||||| || || | ||||||||    
T  20988974 aagacacgttcttgcgcttataacttatgtcttataagctcatttgactaaaaaagacacgtttggtaaccgtcactttctcatgagctttatagcttat 20988875  T
Q  110 ttttactagcttaaagcggtttttgatgagctgattcaagtagcttatagc 160  Q
    |||||||  ||   |||  |||||||| |||| ||||||||||||||||||    
T  20988874 ttttactgactattagcattttttgataagctaattcaagtagcttatagc 20988824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 53 - 160
Target Start/End: Original strand, 21501576 - 21501683
Alignment:
Q  53 tttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaagcggtttttgatgagctgattcaagtag 152  Q
    ||||| |||||||||| | ||||||||| |||||||||||| || ||  |||||||||||||||||| || || | |||||||| |||| ||||||||||    
T  21501576 tttgactaaaaaagacatatttggtaactgtcactttctcacgagcttatagcttatttttactagcatatagtgttttttgataagctaattcaagtag 21501675  T
Q  153 cttatagc 160  Q
    ||||||||    
T  21501676 cttatagc 21501683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 44555861 - 44555780
Alignment:
Q  3 tgtttagtaagacatgtttttgagcttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtc 84  Q
    ||||| |||||||||  |||||||||||||||| |||| || ||||||||||||| |||| |||||| ||||||||||||||    
T  44555861 tgtttggtaagacataattttgagcttatagcttatgtcttttaagctcatttgactaaataagacccgtttggtaaccgtc 44555780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 52831403 - 52831521
Alignment:
Q  42 ttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaagcggtttttgatgagct 141  Q
    |||||||||||| ||||||||||| || ||||||||||| |||| |||  || || ||  ||||||||||| |  |||||| |  |||||||||| ||||    
T  52831403 ttataagctcatatgattaaaaaaaacttgtttggtaacggtcatttttacacgagcttgtagcttattttcatgagcttataaaggtttttgataagct 52831502  T
Q  142 gattcaagtagcttatagc 160  Q
     ||||||||||||||||||    
T  52831503 aattcaagtagcttatagc 52831521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 43 - 156
Target Start/End: Original strand, 39276304 - 39276417
Alignment:
Q  43 tataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaagcggtttttgatgagctg 142  Q
    ||||||||||| ||| |||||| |||  ||||| |||| |||| ||||||| || ||  || |||||||||||||||||| | || |||||||| ||||     
T  39276304 tataagctcatatgactaaaaatgactcgtttgataactgtcattttctcacgagcttataacttatttttactagcttataacgttttttgataagcta 39276403  T
Q  143 attcaagtagctta 156  Q
    ||||||||||||||    
T  39276404 attcaagtagctta 39276417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 149
Target Start/End: Original strand, 1162165 - 1162272
Alignment:
Q  42 ttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaagcggtttttgatgagct 141  Q
    |||||||||| ||||| |||||| |||| ||||  ||| ||||||||||||| |||||  ||||||||| |||||| |||| |||| | |||||| ||||    
T  1162165 ttataagctcgtttgaataaaaaggacccgtttaataaacgtcactttctcacgaacttatagcttattcttactatcttatagcgttgtttgataagct 1162264  T
Q  142 gattcaag 149  Q
     |||||||    
T  1162265 aattcaag 1162272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 3535112 - 3535234
Alignment:
Q  37 atgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaagcggtttttgat 136  Q
    |||| ||||||| |||||||| | |||| ||| ||||||||||| |||||||| |   ||  |  |||||||||||||||| |||| |||| ||||||||    
T  3535112 atgtcttataagttcatttgactgaaaa-gacatgtttggtaacagtcactttattgcgagtttatagcttatttttactaacttatagcgttttttgat 3535210  T
Q  137 gagctgattcaagtagcttatagc 160  Q
     |||| ||||||||||||||||||    
T  3535211 aagctaattcaagtagcttatagc 3535234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 30071659 - 30071594
Alignment:
Q  3 tgtttagtaagacatgtttttgagcttatagctaatgtgttataagctcatttgattaaaaaagac 68  Q
    ||||| |||||||||||||||||| |||||||| ||||  ||||||||||||||  ||||||||||    
T  30071659 tgtttggtaagacatgtttttgagtttatagcttatgtcatataagctcatttggctaaaaaagac 30071594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 156
Target Start/End: Original strand, 30070077 - 30070205
Alignment:
Q  25 agcttatagctaatgtgttataagctcatttgattaaaaaaga--cctgtttggtaaccgtcactttctcaggaactattagcttatttttactagctta 122  Q
    ||||||||||| |||| |||||||||||||||| ||||||| |   || |||||||| |||||| |||||| |||||  ||||   ||||||||||||||    
T  30070077 agcttatagctcatgtcttataagctcatttgactaaaaaaaaactctatttggtaa-cgtcacgttctcacgaacttatagc---tttttactagctta 30070172  T
Q  123 aagcggtttttgatgagctgattcaagtagctta 156  Q
     ||| ||||||  | |||| ||||||||||||||    
T  30070173 tagcagttttt-ttaagctaattcaagtagctta 30070205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 39033490 - 39033558
Alignment:
Q  25 agcttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctca 93  Q
    |||||||| || |||| | |||||||| ||||| || |||||||| |||||||||| ||||||||||||    
T  39033490 agcttatatcttatgtctgataagctcttttgactagaaaagacccgtttggtaactgtcactttctca 39033558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 160
Target Start/End: Complemental strand, 24418292 - 24418249
Alignment:
Q  117 agcttaaagcggtttttgatgagctgattcaagtagcttatagc 160  Q
    |||||| ||||||||||||| |||| ||||||||||||||||||    
T  24418292 agcttatagcggtttttgataagctaattcaagtagcttatagc 24418249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 50130922 - 50130973
Alignment:
Q  28 ttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaa 79  Q
    |||||||| |||| |||||||||||||||| ||||||||| | |||||||||    
T  50130922 ttatagcttatgtcttataagctcatttgactaaaaaagaaccgtttggtaa 50130973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 76
Target Start/End: Original strand, 24474050 - 24474084
Alignment:
Q  42 ttataagctcatttgattaaaaaagacctgtttgg 76  Q
    |||||||||||| ||||||||||||||||||||||    
T  24474050 ttataagctcatatgattaaaaaagacctgtttgg 24474084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 44555774 - 44555716
Alignment:
Q  102 tagcttatttttactagcttaaagcggtttttgatgagctgattcaagtagcttatagc 160  Q
    |||||| |||||||||||||  |||| |||||||| |||| || |||||||||||||||    
T  44555774 tagcttctttttactagcttttagcgttttttgataagctaatccaagtagcttatagc 44555716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 41963530 - 41963462
Alignment:
Q  25 agcttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctca 93  Q
    ||||||||| | |||| |||||| ||||||||| || ||||||||| |||| ||||  |||||||||||    
T  41963530 agcttatagtttatgtcttataatctcatttgactagaaaagacctatttgataacaatcactttctca 41963462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 12473638 - 12473544
Alignment:
Q  27 cttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagctt 121  Q
    ||||||||| |||  |||||||||||||||| ||||||||||| ||||||||||||| | ||||||| || ||  ||||||||||||||||||||    
T  12473638 cttatagcttatggcttataagctcatttgactaaaaaagacccgtttggtaaccgtaattttctcatgagcttatagcttatttttactagctt 12473544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 42967689 - 42967760
Alignment:
Q  20 ttttgagcttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttct 91  Q
    |||| |||||||| || |||| |||||||  |||||||||||||| |||| ||||||||||  |||||||||    
T  42967689 tttttagcttataacttatgtcttataagtccatttgattaaaaatgacccgtttggtaacaatcactttct 42967760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 9195412 - 9195565
Alignment:
Q  3 tgtttagtaagacatgtttttgagcttatagctaatgtgttataagct-catttgattaaaaaa-gacctgtttggtaaccgtcactttctcaggaacta 100  Q
    ||||| |||||||||||||| ||||||||||||  ||||| ||||| | ||||||||||||||| |||| ||||| |||| ||| |||||||| || ||     
T  9195412 tgtttggtaagacatgttttagagcttatagct--tgtgtcataagtttcatttgattaaaaaaagacccgtttgataactgtctctttctcacgatctt 9195509  T
Q  101 ttagcttatttttactagcttaaagcggtttttgatgagctgattcaagtagctta 156  Q
     ||||||| ||||||||||||| ||  ||||  ||| || |||||| |||||||||    
T  9195510 atagcttaattttactagcttatagtagtttacgataagttgattcgagtagctta 9195565  T

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Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 158
Target Start/End: Original strand, 29052160 - 29052307
Alignment:
Q  10 taagacatgtttttgagcttatagctaatgtgttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttat 109  Q
    ||||||||| |||||||||||||||| |||| |||||| ||| ||||| |||||| | || | |||||| ||| ||||| ||||  | ||   ||||||     
T  29052160 taagacatgcttttgagcttatagcttatgtcttataaactcctttgactaaaaaggccc-gcttggtagccgccacttcctcacaagcttaaagcttaa 29052258  T
Q  110 ttttactagcttaaagcggtttttgatgagctgattcaagtagcttata 158  Q
    ||||||||||||  |  ||||||||||  ||| ||||||||||||||||    
T  29052259 ttttactagcttgtaatggtttttgatatgctaattcaagtagcttata 29052307  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 121
Target Start/End: Original strand, 2255202 - 2255263
Alignment:
Q  60 aaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagctt 121  Q
    ||||||||||||||||||||| |||| |||||||   |||  ||||||||| ||||||||||    
T  2255202 aaaaaagacctgtttggtaactgtcattttctcacacacttatagcttattattactagctt 2255263  T

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Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 166540 - 166656
Alignment:
Q  42 ttataagctcatttgattaaaaaagacctgtttggtaaccgtcactttctcaggaactattagcttatttttactagcttaaagcggtttttgatgagct 141  Q
    ||||| |||||||| | || |||||||||||||| |||||| |||||  ||| || ||  || |||||||||||||||||| ||||  ||||||| ||||    
T  166540 ttatatgctcatttcactagaaaagacctgtttgataaccgccacttcgtcacgagcttataacttatttttactagcttatagcg--ttttgataagct 166637  T
Q  142 gattcaagtagcttatagc 160  Q
     || |||||||| ||||||    
T  166638 aatccaagtagcctatagc 166656  T

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Target: scaffold0536 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 4296 - 4360
Alignment:
Q  1 tttgtttagtaagacatgtttttgagcttatagctaatgtgttataagctcatttgattaaaaaa 65  Q
    ||||||| |||||||||| ||||||||| |||| | || |  ||||||||||||||| |||||||    
T  4296 tttgtttggtaagacatgattttgagctcatagtttatatcatataagctcatttgactaaaaaa 4360  T

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