View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15182_low_7 (Length: 651)

Name: NF15182_low_7
Description: NF15182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15182_low_7
NF15182_low_7
[»] chr3 (50 HSPs)
chr3 (61-632)||(34327031-34327607)
chr3 (542-632)||(45736728-45736818)
chr3 (544-632)||(47334653-47334741)
chr3 (539-631)||(50745008-50745100)
chr3 (542-633)||(12744910-12745001)
chr3 (544-631)||(14756419-14756506)
chr3 (542-632)||(10872713-10872803)
chr3 (559-632)||(29222844-29222917)
chr3 (542-627)||(52215889-52215974)
chr3 (559-627)||(26121565-26121633)
chr3 (564-632)||(37897713-37897781)
chr3 (544-623)||(50466824-50466902)
chr3 (565-627)||(26244412-26244474)
chr3 (542-620)||(29389336-29389414)
chr3 (542-627)||(41743636-41743721)
chr3 (559-627)||(26243705-26243773)
chr3 (542-627)||(331844-331929)
chr3 (534-623)||(3648749-3648838)
chr3 (542-627)||(27224626-27224711)
chr3 (542-631)||(42929015-42929104)
chr3 (564-632)||(24722728-24722796)
chr3 (555-632)||(35237700-35237779)
chr3 (544-632)||(51253711-51253799)
chr3 (544-631)||(51060674-51060761)
chr3 (542-627)||(36344419-36344505)
chr3 (542-632)||(38677574-38677664)
chr3 (542-627)||(30578268-30578353)
chr3 (544-626)||(43599145-43599231)
chr3 (581-632)||(19810938-19810989)
chr3 (545-616)||(27146251-27146322)
chr3 (554-597)||(31474755-31474798)
chr3 (565-623)||(4181981-4182039)
chr3 (542-632)||(8504859-8504949)
chr3 (538-592)||(21970506-21970560)
chr3 (538-592)||(21992942-21992996)
chr3 (565-623)||(22528902-22528960)
chr3 (542-632)||(54595831-54595920)
chr3 (582-632)||(54783418-54783468)
chr3 (540-632)||(24075488-24075578)
chr3 (575-632)||(24694269-24694326)
chr3 (571-632)||(40065362-40065423)
chr3 (555-616)||(54726112-54726173)
chr3 (571-631)||(3020656-3020716)
chr3 (542-594)||(7601923-7601975)
chr3 (564-632)||(22496992-22497060)
chr3 (572-632)||(37331640-37331700)
chr3 (579-623)||(37807560-37807604)
chr3 (564-632)||(41253972-41254040)
chr3 (555-623)||(52638056-52638123)
chr3 (564-632)||(52866458-52866526)
[»] chr5 (38 HSPs)
chr5 (542-627)||(38370433-38370518)
chr5 (542-632)||(10437647-10437736)
chr5 (544-628)||(31706004-31706088)
chr5 (542-625)||(3100453-3100536)
chr5 (542-632)||(71268-71357)
chr5 (531-632)||(31691300-31691401)
chr5 (564-632)||(22650897-22650965)
chr5 (542-632)||(33075074-33075164)
chr5 (546-632)||(35032311-35032397)
chr5 (564-632)||(11795767-11795835)
chr5 (544-619)||(5984037-5984112)
chr5 (543-632)||(30371374-30371463)
chr5 (579-632)||(31963560-31963613)
chr5 (572-632)||(12165325-12165385)
chr5 (564-631)||(694237-694304)
chr5 (565-632)||(14153401-14153468)
chr5 (542-632)||(14772589-14772677)
chr5 (544-631)||(22650867-22650954)
chr5 (542-632)||(41005709-41005797)
chr5 (542-632)||(26141764-26141854)
chr5 (563-625)||(33867955-33868017)
chr5 (542-615)||(43482830-43482903)
chr5 (544-632)||(1100098-1100186)
chr5 (566-626)||(17153456-17153516)
chr5 (583-631)||(18254739-18254787)
chr5 (564-632)||(25773284-25773352)
chr5 (571-627)||(28518760-28518816)
chr5 (572-623)||(14416456-14416507)
chr5 (542-592)||(2974549-2974599)
chr5 (542-592)||(5504386-5504436)
chr5 (542-632)||(5504418-5504508)
chr5 (546-624)||(8681698-8681776)
chr5 (542-632)||(18033396-18033486)
chr5 (555-632)||(9004988-9005065)
chr5 (542-623)||(26300161-26300242)
chr5 (563-607)||(780724-780768)
chr5 (565-625)||(31785923-31785983)
chr5 (568-632)||(33652868-33652932)
[»] chr1 (57 HSPs)
chr1 (545-632)||(33765799-33765886)
chr1 (542-632)||(31998230-31998320)
chr1 (542-632)||(34953937-34954027)
chr1 (542-632)||(50503192-50503282)
chr1 (540-632)||(7461309-7461401)
chr1 (544-627)||(26674232-26674315)
chr1 (542-620)||(45010847-45010925)
chr1 (542-632)||(48083545-48083635)
chr1 (559-632)||(8465952-8466025)
chr1 (563-632)||(43738646-43738715)
chr1 (564-632)||(39362840-39362908)
chr1 (542-627)||(14365411-14365496)
chr1 (564-628)||(11324478-11324542)
chr1 (564-628)||(11482499-11482563)
chr1 (544-632)||(42761464-42761552)
chr1 (563-627)||(47969515-47969579)
chr1 (564-632)||(50154337-50154405)
chr1 (542-632)||(8338684-8338774)
chr1 (542-632)||(9590785-9590875)
chr1 (542-623)||(6758555-6758636)
chr1 (571-624)||(45639547-45639600)
chr1 (571-632)||(50550157-50550218)
chr1 (544-632)||(44349941-44350029)
chr1 (542-597)||(31998198-31998253)
chr1 (542-632)||(3549788-3549878)
chr1 (542-632)||(6508406-6508496)
chr1 (542-632)||(14891779-14891869)
chr1 (542-632)||(23575359-23575449)
chr1 (542-632)||(33939338-33939428)
chr1 (572-626)||(50755224-50755278)
chr1 (546-623)||(2492526-2492603)
chr1 (563-632)||(23394731-23394800)
chr1 (545-626)||(35544580-35544661)
chr1 (542-627)||(41007723-41007808)
chr1 (544-632)||(8465967-8466055)
chr1 (565-625)||(9002777-9002837)
chr1 (542-594)||(13043419-13043471)
chr1 (565-625)||(29797820-29797880)
chr1 (564-632)||(33289016-33289084)
chr1 (567-623)||(39216153-39216209)
chr1 (564-627)||(1597220-1597283)
chr1 (564-627)||(14967271-14967334)
chr1 (572-623)||(17310468-17310519)
chr1 (565-632)||(31889084-31889151)
chr1 (542-629)||(36486548-36486635)
chr1 (564-627)||(38595688-38595751)
chr1 (572-623)||(48636768-48636819)
chr1 (534-631)||(8397032-8397130)
chr1 (537-623)||(26344224-26344310)
chr1 (565-623)||(34598912-34598970)
chr1 (546-627)||(13877031-13877112)
chr1 (554-595)||(42166406-42166447)
chr1 (542-595)||(46412766-46412819)
chr1 (555-623)||(31909799-31909867)
chr1 (555-623)||(38824313-38824381)
chr1 (572-632)||(41161504-41161564)
chr1 (555-623)||(43384533-43384601)
[»] chr4 (74 HSPs)
chr4 (542-632)||(5816548-5816638)
chr4 (544-627)||(4484085-4484168)
chr4 (549-631)||(4708578-4708660)
chr4 (542-632)||(36072579-36072669)
chr4 (544-632)||(40952389-40952477)
chr4 (545-632)||(33693981-33694068)
chr4 (542-632)||(24798136-24798226)
chr4 (542-632)||(50686046-50686136)
chr4 (542-627)||(3511718-3511803)
chr4 (550-627)||(8826911-8826988)
chr4 (544-632)||(55416311-55416397)
chr4 (564-632)||(19878327-19878395)
chr4 (564-632)||(21113033-21113101)
chr4 (542-626)||(26920719-26920803)
chr4 (544-627)||(4406287-4406370)
chr4 (544-627)||(21142136-21142219)
chr4 (550-632)||(24448683-24448764)
chr4 (538-627)||(16170915-16171004)
chr4 (563-632)||(32599510-32599579)
chr4 (563-632)||(49231308-49231377)
chr4 (542-594)||(33377494-33377546)
chr4 (542-632)||(10572762-10572853)
chr4 (545-632)||(23071418-23071505)
chr4 (554-632)||(38298111-38298189)
chr4 (554-627)||(18423913-18423986)
chr4 (567-632)||(25022559-25022624)
chr4 (542-627)||(25138692-25138777)
chr4 (583-632)||(39235178-39235227)
chr4 (544-625)||(40051040-40051121)
chr4 (566-631)||(40881469-40881534)
chr4 (542-627)||(48603573-48603658)
chr4 (564-632)||(18626748-18626816)
chr4 (537-625)||(19596002-19596090)
chr4 (546-627)||(21649379-21649462)
chr4 (563-631)||(30035211-30035279)
chr4 (572-632)||(51232310-51232370)
chr4 (576-627)||(23004008-23004059)
chr4 (538-625)||(31262599-31262686)
chr4 (564-627)||(39533787-39533850)
chr4 (542-633)||(49481889-49481980)
chr4 (554-632)||(22493597-22493675)
chr4 (544-609)||(7740554-7740619)
chr4 (563-632)||(54931849-54931918)
chr4 (555-623)||(21003962-21004030)
chr4 (564-624)||(36786181-36786241)
chr4 (564-632)||(40575880-40575948)
chr4 (555-627)||(41654546-41654618)
chr4 (565-632)||(11511700-11511767)
chr4 (542-589)||(41346476-41346523)
chr4 (556-595)||(44551221-44551260)
chr4 (566-625)||(54057691-54057750)
chr4 (579-625)||(10308286-10308332)
chr4 (545-623)||(20542816-20542893)
chr4 (565-623)||(24275249-24275307)
chr4 (565-623)||(33118230-33118288)
chr4 (542-632)||(53176349-53176439)
chr4 (547-625)||(54106523-54106601)
chr4 (542-632)||(54713107-54713197)
chr4 (542-627)||(2582854-2582939)
chr4 (573-626)||(24870404-24870457)
chr4 (579-632)||(26164787-26164840)
chr4 (535-592)||(32599561-32599618)
chr4 (554-627)||(46803429-46803502)
chr4 (555-632)||(49745485-49745562)
chr4 (583-632)||(52914048-52914097)
chr4 (572-632)||(2440951-2441011)
chr4 (571-627)||(12912655-12912711)
chr4 (564-632)||(16468245-16468313)
chr4 (542-594)||(35151740-35151792)
chr4 (575-619)||(37175474-37175518)
chr4 (579-623)||(44551248-44551292)
chr4 (555-623)||(54787004-54787072)
chr4 (564-632)||(55936018-55936086)
chr4 (564-632)||(56328491-56328559)
[»] chr8 (42 HSPs)
chr8 (542-632)||(2805854-2805944)
chr8 (542-632)||(10117011-10117101)
chr8 (542-632)||(14700250-14700340)
chr8 (542-632)||(2296515-2296605)
chr8 (542-632)||(7258626-7258716)
chr8 (542-632)||(29360789-29360879)
chr8 (544-632)||(9015857-9015945)
chr8 (545-632)||(34580613-34580700)
chr8 (542-632)||(33070206-33070296)
chr8 (542-623)||(34326295-34326376)
chr8 (542-631)||(36916592-36916681)
chr8 (564-632)||(3225811-3225879)
chr8 (544-632)||(24287826-24287914)
chr8 (564-627)||(18603489-18603552)
chr8 (550-632)||(35874483-35874564)
chr8 (542-627)||(24017727-24017812)
chr8 (543-632)||(40640319-40640408)
chr8 (544-632)||(11335608-11335696)
chr8 (564-631)||(25268006-25268072)
chr8 (564-631)||(33385213-33385280)
chr8 (542-632)||(10934612-10934702)
chr8 (571-632)||(5888377-5888438)
chr8 (534-625)||(45045425-45045516)
chr8 (546-632)||(2382627-2382713)
chr8 (542-592)||(14700322-14700372)
chr8 (535-632)||(6614726-6614823)
chr8 (564-632)||(13080129-13080197)
chr8 (580-623)||(9203431-9203474)
chr8 (572-623)||(35063510-35063561)
chr8 (542-632)||(13290044-13290134)
chr8 (542-632)||(13496476-13496566)
chr8 (542-632)||(23627675-23627765)
chr8 (565-623)||(29916181-29916239)
chr8 (544-597)||(29360759-29360812)
chr8 (582-631)||(44319578-44319627)
chr8 (580-632)||(2116147-2116199)
chr8 (564-632)||(7484648-7484716)
chr8 (555-623)||(19293038-19293106)
chr8 (564-632)||(24053638-24053706)
chr8 (572-632)||(32016813-32016873)
chr8 (564-620)||(38949021-38949077)
chr8 (542-594)||(44521327-44521379)
[»] chr7 (48 HSPs)
chr7 (542-632)||(23797389-23797479)
chr7 (542-632)||(43103113-43103203)
chr7 (543-632)||(21586855-21586944)
chr7 (542-632)||(6847285-6847375)
chr7 (542-626)||(24280868-24280952)
chr7 (554-632)||(26904802-26904880)
chr7 (546-632)||(30138829-30138915)
chr7 (542-631)||(12088853-12088942)
chr7 (544-632)||(16871980-16872067)
chr7 (554-632)||(4089830-4089908)
chr7 (542-632)||(9555269-9555359)
chr7 (542-631)||(26477203-26477292)
chr7 (542-631)||(26553643-26553732)
chr7 (563-632)||(32549862-32549931)
chr7 (564-624)||(46495417-46495477)
chr7 (577-628)||(35238983-35239034)
chr7 (542-632)||(2943253-2943343)
chr7 (542-632)||(6455558-6455648)
chr7 (542-632)||(11002357-11002447)
chr7 (571-625)||(26385673-26385727)
chr7 (561-631)||(28289452-28289522)
chr7 (542-632)||(32490630-32490720)
chr7 (564-632)||(3882582-3882650)
chr7 (564-632)||(10095760-10095828)
chr7 (575-627)||(21096233-21096285)
chr7 (555-623)||(33471512-33471580)
chr7 (579-627)||(39136612-39136660)
chr7 (581-632)||(18534916-18534967)
chr7 (542-632)||(28949281-28949374)
chr7 (546-632)||(7295069-7295155)
chr7 (544-631)||(8282450-8282539)
chr7 (565-623)||(11032335-11032393)
chr7 (565-623)||(24936713-24936771)
chr7 (542-624)||(25768628-25768710)
chr7 (565-623)||(27942357-27942415)
chr7 (579-632)||(4089170-4089223)
chr7 (571-632)||(16777933-16777994)
chr7 (571-632)||(21387614-21387675)
chr7 (542-623)||(27554506-27554587)
chr7 (542-615)||(29205321-29205394)
chr7 (564-632)||(5084471-5084539)
chr7 (572-632)||(23092393-23092453)
chr7 (564-632)||(28306346-28306414)
chr7 (565-625)||(31417565-31417625)
chr7 (542-610)||(31813420-31813488)
chr7 (555-623)||(32389205-32389273)
chr7 (555-623)||(39970179-39970247)
chr7 (564-632)||(40175965-40176033)
[»] chr2 (54 HSPs)
chr2 (542-632)||(2050099-2050189)
chr2 (542-632)||(23377951-23378041)
chr2 (542-627)||(41805283-41805368)
chr2 (544-623)||(10996257-10996336)
chr2 (542-632)||(1961318-1961408)
chr2 (542-627)||(7079416-7079501)
chr2 (544-632)||(15859592-15859680)
chr2 (555-623)||(37396226-37396294)
chr2 (565-632)||(41823773-41823840)
chr2 (542-627)||(11342016-11342101)
chr2 (563-632)||(19951486-19951555)
chr2 (542-627)||(37195061-37195146)
chr2 (542-626)||(38618442-38618526)
chr2 (564-627)||(38465835-38465898)
chr2 (542-632)||(31101958-31102048)
chr2 (542-631)||(32460750-32460840)
chr2 (554-623)||(10041563-10041632)
chr2 (571-627)||(11093576-11093632)
chr2 (564-632)||(26003476-26003544)
chr2 (571-627)||(32630444-32630500)
chr2 (572-631)||(10602336-10602395)
chr2 (534-625)||(36547342-36547433)
chr2 (542-632)||(596036-596126)
chr2 (542-632)||(15119818-15119908)
chr2 (542-632)||(26234065-26234155)
chr2 (546-632)||(32143447-32143533)
chr2 (563-617)||(32218632-32218686)
chr2 (542-627)||(40204449-40204537)
chr2 (542-632)||(42530501-42530591)
chr2 (579-632)||(800739-800792)
chr2 (554-623)||(11153226-11153295)
chr2 (542-587)||(12116358-12116403)
chr2 (555-619)||(4637061-4637125)
chr2 (564-632)||(11726526-11726594)
chr2 (545-597)||(31175093-31175145)
chr2 (564-624)||(33555208-33555268)
chr2 (564-632)||(38181801-38181869)
chr2 (549-616)||(14393177-14393244)
chr2 (565-623)||(2795342-2795400)
chr2 (542-632)||(8740528-8740618)
chr2 (542-632)||(19612950-19613040)
chr2 (564-618)||(34500100-34500154)
chr2 (563-632)||(8383215-8383284)
chr2 (565-598)||(9436495-9436528)
chr2 (579-632)||(15916774-15916827)
chr2 (542-631)||(18479363-18479451)
chr2 (563-632)||(19950147-19950216)
chr2 (565-609)||(5762533-5762577)
chr2 (555-623)||(10099574-10099642)
chr2 (564-632)||(31024212-31024280)
chr2 (564-632)||(37182847-37182915)
chr2 (572-632)||(42263056-42263116)
chr2 (544-632)||(43701395-43701483)
chr2 (564-632)||(43732169-43732237)
[»] chr6 (36 HSPs)
chr6 (554-632)||(2827580-2827658)
chr6 (542-625)||(8449622-8449707)
chr6 (542-625)||(8458426-8458511)
chr6 (542-632)||(13281543-13281633)
chr6 (542-632)||(33689238-33689328)
chr6 (542-627)||(13506843-13506928)
chr6 (543-632)||(3199759-3199848)
chr6 (571-632)||(31996537-31996598)
chr6 (542-625)||(6032975-6033058)
chr6 (565-632)||(10258345-10258412)
chr6 (535-625)||(28991449-28991540)
chr6 (554-632)||(5571562-5571640)
chr6 (542-612)||(11637179-11637249)
chr6 (542-632)||(31398267-31398357)
chr6 (554-627)||(17214241-17214314)
chr6 (542-619)||(31158897-31158973)
chr6 (564-632)||(8145990-8146058)
chr6 (564-632)||(15517121-15517189)
chr6 (542-626)||(32254868-32254952)
chr6 (572-623)||(3212280-3212331)
chr6 (564-623)||(12383639-12383698)
chr6 (575-621)||(10644306-10644352)
chr6 (565-623)||(21478585-21478643)
chr6 (542-632)||(28554988-28555078)
chr6 (542-592)||(29215524-29215574)
chr6 (563-627)||(6263380-6263445)
chr6 (571-632)||(12218486-12218547)
chr6 (539-632)||(31714576-31714669)
chr6 (566-630)||(3102172-3102235)
chr6 (564-632)||(14218238-14218306)
chr6 (545-621)||(15467625-15467700)
chr6 (579-623)||(26498639-26498683)
chr6 (564-632)||(29072109-29072177)
chr6 (564-632)||(29104682-29104750)
chr6 (565-625)||(33053797-33053857)
chr6 (564-632)||(34379766-34379834)
[»] scaffold0009 (3 HSPs)
scaffold0009 (543-632)||(146009-146098)
scaffold0009 (554-627)||(216294-216367)
scaffold0009 (542-623)||(7707-7788)
[»] scaffold0036 (1 HSPs)
scaffold0036 (564-627)||(89644-89707)
[»] scaffold0149 (1 HSPs)
scaffold0149 (542-632)||(24615-24705)
[»] scaffold0635 (1 HSPs)
scaffold0635 (554-623)||(5438-5507)
[»] scaffold0341 (2 HSPs)
scaffold0341 (542-632)||(2429-2519)
scaffold0341 (542-632)||(10084-10174)
[»] scaffold0020 (1 HSPs)
scaffold0020 (542-632)||(139305-139395)
[»] scaffold0470 (1 HSPs)
scaffold0470 (535-632)||(4012-4109)
[»] scaffold0756 (1 HSPs)
scaffold0756 (555-623)||(3540-3608)
[»] scaffold0542 (1 HSPs)
scaffold0542 (555-623)||(3464-3532)
[»] scaffold0113 (1 HSPs)
scaffold0113 (579-627)||(40499-40547)
[»] scaffold0026 (1 HSPs)
scaffold0026 (537-631)||(88898-88990)
[»] scaffold1640 (1 HSPs)
scaffold1640 (542-624)||(1186-1268)
[»] scaffold1476 (1 HSPs)
scaffold1476 (566-632)||(693-758)
[»] scaffold1266 (1 HSPs)
scaffold1266 (565-625)||(162-222)
[»] scaffold0263 (1 HSPs)
scaffold0263 (565-625)||(19841-19901)
[»] scaffold0002 (1 HSPs)
scaffold0002 (572-632)||(491891-491951)


Alignment Details
Target: chr3 (Bit Score: 508; Significance: 0; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 508; E-Value: 0
Query Start/End: Original strand, 61 - 632
Target Start/End: Original strand, 34327031 - 34327607
Alignment:
Q  61 tgaattagttaaatgatttcttggagcaataacaggttgtcccatgttgatgtcaacaagttcaggcctgcatgcttcatcaccatgatttccctctcaa 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34327031 tgaattagttaaatgatttcttggagcaataacaggttgtcccatgttgatgtcaacaagttcaggcctgcatgcttcatcaccatgatttccctctcaa 34327130  T
Q  161 aggcatacaccctttcggtatcgtgtttttgggcaatgggaccttaccttacaaacaatgacatatttgtagggaatgtcctatgtatatatctttccaa 260  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34327131 agccatacaccctttcggtatcgtgtttttgggcaatgggaccttaccttacaaacaatgacatatttgtagggaatgtcctatgtatatatctttccaa 34327230  T
Q  261 tgtcatgttacttaacaaataattcatcatcatagaactttctctctcttttattttattaaattcagaacttggaaggatccttgtaggggaatatttg 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34327231 tgtcatgttacttaacaaataattcatcatcatagaactttctctctcttttattttattaaattcagaacttggaaggatccttgtaggggaatatttg 34327330  T
Q  361 aacatggttccttgtttagggtaattataagtcccatcaacggctccaattgtcttgagccacataatctaagccacaagttcaagattggggtccattt 460  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34327331 aacatggttccttgtttagggtaattataagtcccatcaacggctccaattgtcttgagccacataatctaagccagaagttcaagattggggtccattt 34327430  T
Q  461 tgcttggatacaatagtagtatttgtttcattatccatgctatcaacttggggttcaaccgtagagacctaca--ctctg---ataactattataagtaa 555  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||  |||||   || | ||||||||||||    
T  34327431 tgcttggatacaatagtagtatttgtttcattatccatgctatcaacttggggttcaaccatagagacatacaccctctgatcattattattataagtaa 34327530  T
Q  556 aattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| | || |||||||||||||| ||||    
T  34327531 aattttgtattttatatttatttaattaatgatgtatatgattttgattataaatcatatacatcatttaatgaatg 34327607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 45736818 - 45736728
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||||||| ||||||| ||||||| ||||||||||||| ||||| || |||||||||||||||||||||||||| ||||    
T  45736818 actattataagcaaaattttatattttaaattcattcaattaatgatgtacatgatctttattatagaccacatacatcatttaatgaatg 45736728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 544 - 632
Target Start/End: Original strand, 47334653 - 47334741
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||| |||| ||||||||||| ||||||| |||||||||||||||||||||| |||||||| || |||||||||||||| ||||    
T  47334653 tattataagcaaaactttgtattttaaattcattcaattaatgatgtatatgatttttattatagatcatatacatcatttaatgaatg 47334741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 539 - 631
Target Start/End: Complemental strand, 50745100 - 50745008
Alignment:
Q  539 ataactattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaat 631  Q
    ||||||||||||| ||||| |||  ||||||||||| |||||||||||||||||||  | || |||||| | |||||||||||||||||||||    
T  50745100 ataactattataaataaaaatttacattttatattcgtttaattaatgatgtatatagtatttattataaatcacatacatcatttaataaat 50745008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 542 - 633
Target Start/End: Original strand, 12744910 - 12745001
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatgt 633  Q
    ||||||||||| ||||  ||  |||||| ||||||| ||||||||||||||||| | || |||||||||||||||||||||||||| |||||    
T  12744910 actattataagcaaaaacttacattttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatgt 12745001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 544 - 631
Target Start/End: Original strand, 14756419 - 14756506
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaat 631  Q
    ||||||||||||||||||  |||||| ||| ||| | ||||||||||||||| | || |||||||||||||||||||||| |||||||    
T  14756419 tattataagtaaaattttacattttagatttattcatttaatgatgtatatggtctttattatagaccacatacatcattaaataaat 14756506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 10872803 - 10872713
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| ||| ||||||| ||||||| ||||||||||||||||| | || |||||| | ||||||||||||||||| ||||    
T  10872803 actattataagcaaaaatttatattttagattcattcaattaatgatgtatatggtctttattataaatcacatacatcatttaatgaatg 10872713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 559 - 632
Target Start/End: Complemental strand, 29222917 - 29222844
Alignment:
Q  559 tttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| ||| ||| ||||||| ||||||||||| || ||||||||| |||||||||||||||||||||    
T  29222917 tttgtattttaaatttattcaattaataatgtatatgatctttattatagacaacatacatcatttaataaatg 29222844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 542 - 627
Target Start/End: Original strand, 52215889 - 52215974
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    ||||||||||| |||| |||  |||||| ||||||  |||| |||||||||||||| || ||||||||||||||||||||||||||    
T  52215889 actattataagcaaaaatttacattttagattcatgcaattgatgatgtatatgatctttattatagaccacatacatcatttaat 52215974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 559 - 627
Target Start/End: Original strand, 26121565 - 26121633
Alignment:
Q  559 tttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    |||| |||||| ||||||| ||||||||||||||||| | || ||||||||||||||||||||||||||    
T  26121565 tttgcattttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaat 26121633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 564 - 632
Target Start/End: Original strand, 37897713 - 37897781
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||||||| ||||||||||||||||||| || |||||||||||||||||| ||||||| ||||    
T  37897713 attttagattcattcaattaatgatgtatatgatctttattatagaccacatacataatttaatgaatg 37897781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 544 - 623
Target Start/End: Original strand, 50466824 - 50466902
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    |||||||||||||| ||| ||||||| ||||||| ||||||||||||||||||| || | ||||||||||||| ||||||    
T  50466824 tattataagtaaaaatttatattttagattcattcaattaatgatgtatatgatcttta-tatagaccacatatatcatt 50466902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 565 - 627
Target Start/End: Original strand, 26244412 - 26244474
Alignment:
Q  565 ttttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    ||||| ||||||| ||||||||||||||||| | || ||||||||||||||||||||||||||    
T  26244412 ttttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaat 26244474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 620
Target Start/End: Original strand, 29389336 - 29389414
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatc 620  Q
    ||||||||||| |||| ||| ||||||| |||| || ||||||||||||||||||| || |||||||| ||||||||||    
T  29389336 actattataagcaaaaatttatattttagattcgttcaattaatgatgtatatgatctttattatagatcacatacatc 29389414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 542 - 627
Target Start/End: Complemental strand, 41743721 - 41743636
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    |||||||||||||||| |||  |||||  ||||||| | ||||||||||||||| | || ||||||||||| ||||||||||||||    
T  41743721 actattataagtaaaagtttacattttggattcattcagttaatgatgtatatggtctttattatagaccatatacatcatttaat 41743636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 559 - 627
Target Start/End: Original strand, 26243705 - 26243773
Alignment:
Q  559 tttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    |||| |||||| ||||||| ||||||| |||||||| || || ||||||||||||||||||||||||||    
T  26243705 tttgcattttagattcattcaattaataatgtatatcatctttattatagaccacatacatcatttaat 26243773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 542 - 627
Target Start/End: Complemental strand, 331929 - 331844
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    ||||||||||| |||| ||   |||||| ||||||| | | |||||||||||| || || ||||||||||||||||||||||||||    
T  331929 actattataagcaaaaattaacattttagattcattcattaaatgatgtatataatctttattatagaccacatacatcatttaat 331844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 534 - 623
Target Start/End: Complemental strand, 3648838 - 3648749
Alignment:
Q  534 ctctgataactattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||||| ||||||||||| |||| ||| ||||||| ||||||| ||| ||||||||||||  | || ||||||||| | ||||||||||    
T  3648838 ctctgatcactattataagcaaaactttatattttacattcattcaatcaatgatgtatatagtctttattatagacaatatacatcatt 3648749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 542 - 627
Target Start/End: Complemental strand, 27224711 - 27224626
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    ||||||||||| |||| || | |||||| ||| ||| | | |||||||||||| ||||| |||||||| |||||||||||||||||    
T  27224711 actattataagcaaaaattagcattttagattgattcattaaatgatgtatataatttttattatagatcacatacatcatttaat 27224626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 542 - 631
Target Start/End: Original strand, 42929015 - 42929104
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaat 631  Q
    ||||||||||| |||||| |  |||||||||||||| |||||||||| ||| || | ||  ||||||||||||| ||||||||| |||||    
T  42929015 actattataagcaaaattctaaattttatattcattcaattaatgatctatgtggtctttcttatagaccacatgcatcatttactaaat 42929104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 564 - 632
Target Start/End: Complemental strand, 24722796 - 24722728
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||||| | ||||||| ||||||||  | || |||||||||||||||||||||||||||||||    
T  24722796 attttagattcactcaattaataatgtatattgtatttattatagaccacatacatcatttaataaatg 24722728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 555 - 632
Target Start/End: Original strand, 35237700 - 35237779
Alignment:
Q  555 aaattttgtattttatattcatttaattaatgatgtatatgattttgat--tatagaccacatacatcatttaataaatg 632  Q
    ||||||| ||||||| || |||||||||||||||||||||| | || ||  |||||| ||||||||||||||||| ||||    
T  35237700 aaattttatattttagatccatttaattaatgatgtatatggtctttattatatagatcacatacatcatttaatgaatg 35237779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 544 - 632
Target Start/End: Complemental strand, 51253799 - 51253711
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||| |||| ||  |||| || ||||||| ||| ||| ||||||||||  || ||||||||| |||||||||||||||||||||    
T  51253799 tattataagcaaaaattaatattgtagattcattcaatcaataatgtatatgaactttattatagacaacatacatcatttaataaatg 51253711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 544 - 631
Target Start/End: Original strand, 51060674 - 51060761
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaat 631  Q
    ||||||||| |||| |||  |||||| ||| ||| ||||||| ||||||||||| || |||||| | ||| |||||||||||||||||    
T  51060674 tattataagcaaaaatttacattttagattaattcaattaataatgtatatgatctttattatatatcacgtacatcatttaataaat 51060761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 627
Target Start/End: Complemental strand, 36344505 - 36344419
Alignment:
Q  542 actattataagtaaaa-ttttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    |||||||||||||||| |||||||||||| ||||||| | | |||||||||| || | || ||||| || |||||| ||||||||||    
T  36344505 actattataagtaaaaattttgtattttagattcattcattaaatgatgtatgtggtctttattattgatcacatatatcatttaat 36344419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 38677574 - 38677664
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| |||  |||||| ||||||| | ||||||||| | ||| | || |||||||||||||||||||||| ||| ||||    
T  38677574 actattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaatg 38677664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 542 - 627
Target Start/End: Complemental strand, 30578353 - 30578268
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    ||||||||||| |||| ||||||||||| ||||||| | | |||||||||||   | || ||||| ||||| ||||||||||||||    
T  30578353 actattataagcaaaactttgtattttagattcattcattaaatgatgtatacagtctttattattgaccatatacatcatttaat 30578268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 544 - 626
Target Start/End: Complemental strand, 43599231 - 43599145
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaat----taatgatgtatatgattttgattatagaccacatacatcatttaa 626  Q
    |||||| | ||||||||| ||||||| ||| |||||||    ||||||||||||| || || |||||||| ||||||||||||||||    
T  43599231 tattatgaataaaattttatattttaaatttatttaattaattaatgatgtatattatctttattatagatcacatacatcatttaa 43599145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 581 - 632
Target Start/End: Original strand, 19810938 - 19810989
Alignment:
Q  581 ttaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||||||| | || |||||| ||||||||||||||||||| ||||    
T  19810938 ttaatgatgtatatggtctttattataaaccacatacatcatttaatgaatg 19810989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 545 - 616
Target Start/End: Original strand, 27146251 - 27146322
Alignment:
Q  545 attataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacata 616  Q
    |||||||||||| |||  ||||||| ||||||| ||||||| |||||||||||||  |||||  ||||||||    
T  27146251 attataagtaaattttgatattttaaattcattcaattaattatgtatatgatttatattatgaaccacata 27146322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 554 - 597
Target Start/End: Original strand, 31474755 - 31474798
Alignment:
Q  554 aaaattttgtattttatattcatttaattaatgatgtatatgat 597  Q
    |||||||| ||||||| ||||||||||| |||||||||||||||    
T  31474755 aaaattttatattttagattcatttaataaatgatgtatatgat 31474798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 565 - 623
Target Start/End: Complemental strand, 4182039 - 4181981
Alignment:
Q  565 ttttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||| ||| ||| ||| ||||||||||||||| |  ||||||||||||||||||||||    
T  4182039 ttttagatttattcaatcaatgatgtatatgatctatattatagaccacatacatcatt 4181981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 8504859 - 8504949
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| | |  |||||| ||||||| | ||| ||||| | ||| | || |||||||||||||||||||||| ||||||||    
T  8504859 actattataagcaaaaatctacattttagattcattcatttattgatgcacatggtctttattatagaccacatacatcattaaataaatg 8504949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 538 - 592
Target Start/End: Original strand, 21970506 - 21970560
Alignment:
Q  538 gataactattataagtaaaattttgtattttatattcatttaattaatgatgtat 592  Q
    ||||| |||||||||||||| |||  |||||||||||||| ||| ||||||||||    
T  21970506 gataattattataagtaaaagtttacattttatattcattcaataaatgatgtat 21970560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 538 - 592
Target Start/End: Original strand, 21992942 - 21992996
Alignment:
Q  538 gataactattataagtaaaattttgtattttatattcatttaattaatgatgtat 592  Q
    ||||| |||||||||||||| |||  |||||||||||||| ||| ||||||||||    
T  21992942 gataattattataagtaaaagtttacattttatattcattcaataaatgatgtat 21992996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 565 - 623
Target Start/End: Complemental strand, 22528960 - 22528902
Alignment:
Q  565 ttttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||| ||||||| ||| |||||||||| || |||  ||||||||||||||||||||||    
T  22528960 ttttagattcattcaatcaatgatgtatgtggtttatattatagaccacatacatcatt 22528902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 54595920 - 54595831
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||||||||| | |  |||||| ||||||| | | ||||||||||||  | || ||||| |||||||||||||||||||| ||||    
T  54595920 actattataagtaaaaatata-attttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatg 54595831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 582 - 632
Target Start/End: Complemental strand, 54783468 - 54783418
Alignment:
Q  582 taatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||||| ||| || |||||||||||||||||||| ||||| ||||    
T  54783468 taatgatgtataagatctttattatagaccacatacatcaattaattaatg 54783418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 540 - 632
Target Start/End: Complemental strand, 24075578 - 24075488
Alignment:
Q  540 taactattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||||| |||| | |  |||||| ||||||| |||| |||||||||||| | || ||  ||||||||||| |||||||||| ||||    
T  24075578 taactattataagcaaaaatctacattttagattcattcaattcatgatgtatatgctctttat--tagaccacataaatcatttaatgaatg 24075488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 575 - 632
Target Start/End: Complemental strand, 24694326 - 24694269
Alignment:
Q  575 atttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||||||||||||  ||||| ||||||  |  ||||||||||||||||||||    
T  24694326 atttaattaatgatgtatacaatttttattatatgcagcatacatcatttaataaatg 24694269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 632
Target Start/End: Complemental strand, 40065423 - 40065362
Alignment:
Q  571 attcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||| ||||||||||||||||| | || |||||| || |||||||||||| ||| ||||    
T  40065423 attcattcaattaatgatgtatatggtctttattatatactacatacatcattcaatgaatg 40065362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 555 - 616
Target Start/End: Complemental strand, 54726173 - 54726112
Alignment:
Q  555 aaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacata 616  Q
    ||||||||  ||||| |||||||||||||||||| ||| ||||||  | |||||||||||||    
T  54726173 aaattttgacttttagattcatttaattaatgatatatgtgatttataatatagaccacata 54726112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 571 - 631
Target Start/End: Complemental strand, 3020716 - 3020656
Alignment:
Q  571 attcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaat 631  Q
    ||||||| ||||||||||||||||  | || |||||| | || ||||||||||||||||||    
T  3020716 attcattcaattaatgatgtatatagtctttattatatatcatatacatcatttaataaat 3020656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 7601923 - 7601975
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatat 594  Q
    ||||||||||| |||| |||| |||||| ||||||| |||||||| |||||||    
T  7601923 actattataagcaaaactttgaattttagattcattcaattaatggtgtatat 7601975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 632
Target Start/End: Complemental strand, 22497060 - 22496992
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||||||| ||||||| | ||||||  | || || ||||||||||||||||||||||| ||||    
T  22497060 attttagattcattcaattaataacgtatattgtctttatcatagaccacatacatcatttaatgaatg 22496992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 572 - 632
Target Start/End: Complemental strand, 37331700 - 37331640
Alignment:
Q  572 ttcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||| |||||||||||| || |||  | ||| |||||||||||||||||||| ||||    
T  37331700 ttcatttatttaatgatgtatgtggtttataatatggaccacatacatcatttaatgaatg 37331640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 37807604 - 37807560
Alignment:
Q  579 aattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||||||||||||||| | || |||||| |||||||||||||||    
T  37807604 aattaatgatgtatatggtctttattataaaccacatacatcatt 37807560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 632
Target Start/End: Complemental strand, 41254040 - 41253972
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| || |||||| | |||||||||| | || || |||||| ||||||||||||||||||| ||||    
T  41254040 attttagatacatttattaaatgatgtatgtaatatttattataaaccacatacatcatttaatgaatg 41253972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 555 - 623
Target Start/End: Original strand, 52638056 - 52638123
Alignment:
Q  555 aaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    |||||||| ||||||  |||||| ||||||| |||||| ||||||  ||||| ||||||||||||||||    
T  52638056 aaattttg-attttaggttcattcaattaataatgtatgtgatttatattatcgaccacatacatcatt 52638123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 632
Target Start/End: Complemental strand, 52866526 - 52866458
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||||||| | | ||| || ||||| || || |||||||||||||||||||||||||| ||||    
T  52866526 attttagattcattcattaaataatatatataatctttattatagaccacatacatcatttaatgaatg 52866458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 2e-26; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 542 - 627
Target Start/End: Complemental strand, 38370518 - 38370433
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    |||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||| || ||||||||| ||||||||||||||||    
T  38370518 actattgtaagtaaaactttgtattttatatttatttaattaatgatgtatatgatctttattatagactacatacatcatttaat 38370433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 10437647 - 10437736
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||||||||| ||||||||||| ||||||| ||||| |||||||||||||||| ||||||||| |||||||| ||||||||||||    
T  10437647 actattataagtaaaactttgtattttaaattcattcaattagtgatgtatatgatttt-attatagactacatacataatttaataaatg 10437736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 544 - 628
Target Start/End: Complemental strand, 31706088 - 31706004
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaata 628  Q
    |||||||||||||| |||  |||||| ||||||||||||||| |||||||| ||||| |||||||||||||||||| ||||||||    
T  31706088 tattataagtaaaaatttacattttaaattcatttaattaataatgtatataatttttattatagaccacatacataatttaata 31706004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 542 - 625
Target Start/End: Complemental strand, 3100536 - 3100453
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcattta 625  Q
    |||||||||||| ||| |||  |||||| ||||||| ||||||||||||||||||| || ||||||||| ||||||||||||||    
T  3100536 actattataagtgaaaatttacattttagattcattcaattaatgatgtatatgatctttattatagactacatacatcattta 3100453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 71268 - 71357
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| | | ||||||| ||||||| ||||||||||||||||||| || ||||||||||||||||| |||||||| ||||    
T  71268 actattataagcaaaaatctatattttagattcattcaattaatgatgtatatgatctttattatagaccacataca-catttaatgaatg 71357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 531 - 632
Target Start/End: Complemental strand, 31691401 - 31691300
Alignment:
Q  531 acactctgataactattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaa 630  Q
    |||||| ||| |||||||||||||||| ||| ||||| | ||||||| ||||||||||||||||  | || |||| ||||||||||||| ||||||| ||    
T  31691401 acactccgatcactattataagtaaaaatttatatttgagattcattcaattaatgatgtatatattatttattacagaccacatacataatttaatgaa 31691302  T
Q  631 tg 632  Q
    ||    
T  31691301 tg 31691300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 564 - 632
Target Start/End: Complemental strand, 22650965 - 22650897
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||| ||||| ||||||||||||||| | || |||||||||||||||||||||||||||||||    
T  22650965 attttagatttatttatttaatgatgtatatggtctttattatagaccacatacatcatttaataaatg 22650897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 33075074 - 33075164
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||| |||||| |||| ||| ||||||| ||||||| ||||||| | ||||||||| || | |||||||||||||||||||||||| ||||    
T  33075074 actaatataagcaaaactttatattttagattcattcaattaataacgtatatgatctttactatagaccacatacatcatttaatgaatg 33075164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 546 - 632
Target Start/End: Complemental strand, 35032397 - 35032311
Alignment:
Q  546 ttataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||| |||| |||  |||||| ||||||| ||||||| ||||||||||||||  |||||||| |||||||||||||||| ||||    
T  35032397 ttataagcaaaaatttacattttagattcattcaattaattatgtatatgatttttgttatagactacatacatcatttaatgaatg 35032311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 564 - 632
Target Start/End: Original strand, 11795767 - 11795835
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||||||| ||||||||||||||||| | || ||||||||||||||| |||||||||| ||||    
T  11795767 attttagattcattcaattaatgatgtatatggtctttattatagaccacatatatcatttaatgaatg 11795835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 544 - 619
Target Start/End: Complemental strand, 5984112 - 5984037
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacat 619  Q
    ||||||||| |||| |||| |||||| ||||||| ||||||||||||||||| | || |||||||||||| |||||    
T  5984112 tattataagcaaaactttgcattttagattcattcaattaatgatgtatatggtctttattatagaccacgtacat 5984037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 632
Target Start/End: Complemental strand, 30371463 - 30371374
Alignment:
Q  543 ctattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||| ||||  || ||||||| |||||||||||||||  |||||||| | || |||||| | ||||||||| ||||||||||||    
T  30371463 ctattataagcaaaaaattatattttagattcatttaattaatattgtatatggtctttattataaatcacatacattatttaataaatg 30371374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 632
Target Start/End: Complemental strand, 31963613 - 31963560
Alignment:
Q  579 aattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||||||||| | || ||||||||| |||||||||||||||||||||    
T  31963613 aattaatgatgtatatggtctttattatagactacatacatcatttaataaatg 31963560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 632
Target Start/End: Complemental strand, 12165385 - 12165325
Alignment:
Q  572 ttcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| |||||||||||||||||||||  |||||| ||||||||||||||| | ||||||    
T  12165385 ttcattcaattaatgatgtatatgatttatattatataccacatacatcattaattaaatg 12165325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 564 - 631
Target Start/End: Original strand, 694237 - 694304
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaat 631  Q
    |||||| ||| ||| ||||||| ||||||||||| || |||||||||||||||||| ||||| |||||    
T  694237 attttaaatttattcaattaattatgtatatgatctttattatagaccacatacataatttattaaat 694304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 565 - 632
Target Start/End: Original strand, 14153401 - 14153468
Alignment:
Q  565 ttttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||||| | ||||||||| ||||||| || ||||||||||||||| |||||| ||| ||||    
T  14153401 ttttatattcattcatttaatgatgcatatgatctttattatagaccacatatatcattaaatgaatg 14153468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 14772677 - 14772589
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| ||| ||||||| ||| ||| ||||||||||||||||  | || ||||||||||||  |||||||||||| ||||    
T  14772677 actattataagcaaaactttatattttagattaattcaattaatgatgtatatagtctttattatagaccac--acatcatttaatgaatg 14772589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 544 - 631
Target Start/End: Original strand, 22650867 - 22650954
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaat 631  Q
    ||||||||| |||||||||||||||| ||||||||| | |||||||||| || | |  | || |||||| |||||||||| |||||||    
T  22650867 tattataagcaaaattttgtattttagattcatttattaaatgatgtatgtggtctataataaagaccatatacatcattaaataaat 22650954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 41005797 - 41005709
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||  |||| ||| ||||||| ||||||| ||||||||| ||||||| |  | | ||||||| |||||||||||||||||||||    
T  41005797 actattataa--aaaaatttatattttaaattcattaaattaatgaggtatatggtcgttagtatagactacatacatcatttaataaatg 41005709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 26141764 - 26141854
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| |||  |||||| ||||||| | ||||||||| | ||| | || |||||||||||||||||||||| ||| ||||    
T  26141764 actattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaatg 26141854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 563 - 625
Target Start/End: Original strand, 33867955 - 33868017
Alignment:
Q  563 tattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcattta 625  Q
    ||||||||||||||| |||||||||| |||||  | || ||| ||||||||||||||||||||    
T  33867955 tattttatattcattcaattaatgatatatatagtctttattgtagaccacatacatcattta 33868017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 542 - 615
Target Start/End: Complemental strand, 43482903 - 43482830
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacat 615  Q
    ||||||||||  |||| |||  |||||||||| ||| | ||||||||||||||||| || ||||||||||||||    
T  43482903 actattataaacaaaaatttacattttatatttattcatttaatgatgtatatgatctttattatagaccacat 43482830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 544 - 632
Target Start/End: Complemental strand, 1100186 - 1100098
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||| |||| |||| |||||| ||| ||| | | |||||||||| |  | || |||||||||||||||||||||||||| ||||    
T  1100186 tattataagcaaaactttgcattttagattaattcattaaatgatgtatgtagtctttattatagaccacatacatcatttaatgaatg 1100098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 566 - 626
Target Start/End: Original strand, 17153456 - 17153516
Alignment:
Q  566 tttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaa 626  Q
    |||| ||||||| |||||||||||| |||||| || |||||| | ||||||||||||||||    
T  17153456 tttagattcattcaattaatgatgtgtatgatctttattatacatcacatacatcatttaa 17153516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 583 - 631
Target Start/End: Original strand, 18254739 - 18254787
Alignment:
Q  583 aatgatgtatatgattttgattatagaccacatacatcatttaataaat 631  Q
    |||||||||| |||| || ||||||||||| ||||||||||||||||||    
T  18254739 aatgatgtatgtgatctttattatagaccatatacatcatttaataaat 18254787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 564 - 632
Target Start/End: Complemental strand, 25773352 - 25773284
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||||| | ||||||||||||||||| | || |||||||| || |||||||||||||| ||||    
T  25773352 attttacattcaatcaattaatgatgtatatggtctttattatagatcaaatacatcatttaatgaatg 25773284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 571 - 627
Target Start/End: Original strand, 28518760 - 28518816
Alignment:
Q  571 attcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    ||||| ||||||||||||  | ||||| || ||||||||||||||||||||||||||    
T  28518760 attcaattaattaatgattaaaatgatctttattatagaccacatacatcatttaat 28518816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 572 - 623
Target Start/End: Complemental strand, 14416507 - 14416456
Alignment:
Q  572 ttcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||||||||||||||||||| ||||||  | ||| ||||||||||||||||    
T  14416507 ttcatttaattaatgatgtatgtgatttataatatggaccacatacatcatt 14416456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 542 - 592
Target Start/End: Original strand, 2974549 - 2974599
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtat 592  Q
    ||||||||||| |||| ||||||||||| |||||||  |||||||||||||    
T  2974549 actattataagcaaaactttgtattttagattcattatattaatgatgtat 2974599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 542 - 592
Target Start/End: Original strand, 5504386 - 5504436
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtat 592  Q
    ||||||||||| |||||||||||||||| ||||||| | | ||||||||||    
T  5504386 actattataagcaaaattttgtattttaaattcattcattaaatgatgtat 5504436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 5504508 - 5504418
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||||||||| |||| |||| | || |||| | ||||||||||| |  |  || ||||||||||| |||||||||||||| ||||    
T  5504508 actattataagtaaaactttgcatttcagatacattcatttaatgatgtacacaacctttattatagaccaaatacatcatttaatgaatg 5504418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 546 - 624
Target Start/End: Original strand, 8681698 - 8681776
Alignment:
Q  546 ttataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcattt 624  Q
    ||||||| |||| |||  |||||| ||||||||||||||||||| ||||  | || ||| |||||||||||||| ||||    
T  8681698 ttataagcaaaactttaaattttaaattcatttaattaatgatgaatattgtctttattgtagaccacatacattattt 8681776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 18033486 - 18033396
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| | |  |||||| ||| ||| | ||||||||||| ||| | || |||||||||||||||||||||| ||| ||||    
T  18033486 actattataagcaaaaatctacattttagatttattcatttaatgatgtacatggtctttattatagaccacatacatcattaaatgaatg 18033396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 555 - 632
Target Start/End: Complemental strand, 9005065 - 9004988
Alignment:
Q  555 aaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||  |||||  |||||| ||||||| |||||| ||||||  ||||||||| |||||||||||| | ||||||    
T  9005065 aaattttgacttttaggttcattcaattaataatgtatgtgatttatattatagactacatacatcattaattaaatg 9004988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 542 - 623
Target Start/End: Complemental strand, 26300242 - 26300161
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    |||| |||||||||||||||   ||||| || |||| ||||||||||||||||||  |  | || |||||||||||||||||    
T  26300242 actaatataagtaaaattttactttttagatacattcaattaatgatgtatatgacatataataaagaccacatacatcatt 26300161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 563 - 607
Target Start/End: Complemental strand, 780768 - 780724
Alignment:
Q  563 tattttatattcatttaattaatgatgtatatgattttgattata 607  Q
    ||||||| ||||||| ||||||||||||||||||| || ||||||    
T  780768 tattttaaattcattcaattaatgatgtatatgatctttattata 780724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 565 - 625
Target Start/End: Complemental strand, 31785983 - 31785923
Alignment:
Q  565 ttttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcattta 625  Q
    ||||| ||||||||||| ||| |||||| |||| |  |||||||||| |||||||||||||    
T  31785983 ttttaaattcatttaataaattatgtatgtgatctatattatagaccgcatacatcattta 31785923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 568 - 632
Target Start/End: Complemental strand, 33652932 - 33652868
Alignment:
Q  568 tatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||| ||||| |||| | |||||| || ||||||||||| ||| |||||||||| ||||    
T  33652932 tatattcattcaattattgatatctatgatatttattatagaccatatatatcatttaatgaatg 33652868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 3e-25; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 545 - 632
Target Start/End: Original strand, 33765799 - 33765886
Alignment:
Q  545 attataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||||| ||| ||||||| |||| |||||||||||||||||||| | || |||||||||||||||||||||||||||||||    
T  33765799 attataagtaaaaatttatattttaaattcgtttaattaatgatgtatatggtctttattatagaccacatacatcatttaataaatg 33765886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 31998320 - 31998230
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| |||| |||||| ||||||| | ||||||||||||||||| || |||||||| ||||||||||||||||||||||    
T  31998320 actattataagcaaaactttgcattttagattcattcatttaatgatgtatatgatctttattatagatcacatacatcatttaataaatg 31998230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 34954027 - 34953937
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| ||| ||||||| ||||||| ||||||||||||||||| | || |||||||||||||||||||||||||| ||||    
T  34954027 actattataagcaaaaatttatattttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatg 34953937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 50503192 - 50503282
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||  | || ||| ||||||| ||| ||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  50503192 actattataaacacaaatttatattttagatttattcaattaatgatgtatatgatctttattatagaccacatacatcatttaataaatg 50503282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 540 - 632
Target Start/End: Complemental strand, 7461401 - 7461309
Alignment:
Q  540 taactattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||  | || |||||| ||||||| ||| ||||||| ||||    
T  7461401 taactattataagtaaaactttgtattttagattcatttaattaatgatgtacattgtctttattatacaccacatgcataatttaatgaatg 7461309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 544 - 627
Target Start/End: Complemental strand, 26674315 - 26674232
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    ||||||||||| || |||| |||||| ||||||| ||||||||||||||||| | || |||||||||||||||||| |||||||    
T  26674315 tattataagtataactttgcattttaaattcattcaattaatgatgtatatggtctttattatagaccacatacataatttaat 26674232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 620
Target Start/End: Original strand, 45010847 - 45010925
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatc 620  Q
    ||||||||||| ||||||||| |||||| ||||||| ||||||||||||||||||| || |||||| |||| |||||||    
T  45010847 actattataagcaaaattttgcattttaaattcattcaattaatgatgtatatgatatttattataaaccatatacatc 45010925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 48083635 - 48083545
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||| |||||| |||| ||| ||||||| ||||||| ||||||| | ||||||||| || |||||||||||||||||||||||||| ||||    
T  48083635 actaatataagcaaaactttatattttagattcattcaattaataacgtatatgatctttattatagaccacatacatcatttaatgaatg 48083545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 559 - 632
Target Start/End: Original strand, 8465952 - 8466025
Alignment:
Q  559 tttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| ||||||||| |||||||||||| || | || |||||||||||||||||||||| ||||||||    
T  8465952 tttgtattttagattcatttatttaatgatgtatgtggtctttattatagaccacatacatcattaaataaatg 8466025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 563 - 632
Target Start/End: Complemental strand, 43738715 - 43738646
Alignment:
Q  563 tattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||||||||||||||||||||||||||||||| |||||| | |||||| ||||| |||| ||||    
T  43738715 tattttatattcatttaattaatgatgtatatgatttttattataaatcacatatatcatctaatgaatg 43738646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 564 - 632
Target Start/End: Original strand, 39362840 - 39362908
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||| |||| ||| ||||||||||||||||||| || |||||||||||||||| ||||||||||||||    
T  39362840 attttttatttattcaattaatgatgtatatgatctttattatagaccacatacttcatttaataaatg 39362908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 542 - 627
Target Start/End: Complemental strand, 14365496 - 14365411
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    ||||||||||  |||| | | |||||||||||||||||||||||||| |||||||| ||  ||||||||||| |||| ||||||||    
T  14365496 actattataaacaaaaatatatattttatattcatttaattaatgatatatatgatcttttttatagaccacgtacaccatttaat 14365411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 564 - 628
Target Start/End: Complemental strand, 11324542 - 11324478
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaata 628  Q
    |||||| ||||||| ||||||||||||||||| | || ||||||||| |||||||||||||||||    
T  11324542 attttaaattcattcaattaatgatgtatatggtctttattatagactacatacatcatttaata 11324478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 564 - 628
Target Start/End: Complemental strand, 11482563 - 11482499
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaata 628  Q
    |||||| ||||||| ||||||||||||||||| | || ||||||||| |||||||||||||||||    
T  11482563 attttaaattcattcaattaatgatgtatatggtctttattatagactacatacatcatttaata 11482499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 544 - 632
Target Start/End: Original strand, 42761464 - 42761552
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||| |||| |||  |||||| ||||||| |||||||||||||| |||| || ||||||||| | |||||||||||||| ||||    
T  42761464 tattataagcaaaactttacattttagattcattcaattaatgatgtatctgatctttattatagactatatacatcatttaatgaatg 42761552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 563 - 627
Target Start/End: Original strand, 47969515 - 47969579
Alignment:
Q  563 tattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    ||||||| |||| |||||||||||||||||||||| || ||||||||||||||| || |||||||    
T  47969515 tattttagattcgtttaattaatgatgtatatgatatttattatagaccacataaattatttaat 47969579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 564 - 632
Target Start/End: Original strand, 50154337 - 50154405
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||||||||||||||| |||||||||||| | |||||||| |||||| |||||||||| ||||    
T  50154337 attttagattcatttaattaataatgtatatgattattattatagatcacatatatcatttaatgaatg 50154405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 8338684 - 8338774
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| | |  |||||| ||||||| | ||||||||| | ||||| || |||||||||||||||||||||| ||||||||    
T  8338684 actattataagcaaaaatctacattttagattcattcatttaatgatgcacatgatctttattatagaccacatacatcattaaataaatg 8338774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 9590875 - 9590785
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||| | |||||  ||| ||||||| ||||||| ||||||||||||||||||| || |||||| |||||||||||  |||||| ||||    
T  9590875 actattacacgtaaacctttctattttaaattcattcaattaatgatgtatatgatctttattatataccacatacattgtttaatgaatg 9590785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 542 - 623
Target Start/End: Original strand, 6758555 - 6758636
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||||||||| |||| |||| |||||| ||||||| ||||||||||||||||  | || ||||||||| || |||||||||    
T  6758555 actattataagcaaaactttgcattttacattcattcaattaatgatgtatatagtctttattatagacaacgtacatcatt 6758636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 571 - 624
Target Start/End: Original strand, 45639547 - 45639600
Alignment:
Q  571 attcatttaattaatgatgtatatgattttgattatagaccacatacatcattt 624  Q
    ||||||| ||||||||||||||||||| || ||||||||||||||||| |||||    
T  45639547 attcattaaattaatgatgtatatgatctttattatagaccacatacaacattt 45639600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 571 - 632
Target Start/End: Original strand, 50550157 - 50550218
Alignment:
Q  571 attcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||| ||||||| ||||||||||| || |||||||| ||||||||||||||||| ||||    
T  50550157 attcattcaattaataatgtatatgatctttattatagatcacatacatcatttaatgaatg 50550218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 544 - 632
Target Start/End: Original strand, 44349941 - 44350029
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||  |||| ||| ||||||| ||||||| | ||||||||| | ||| | || |||||||||||||||||||||| ||||||||    
T  44349941 tattataaacaaaagtttatattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaataaatg 44350029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 542 - 597
Target Start/End: Original strand, 31998198 - 31998253
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgat 597  Q
    ||||||||||| |||| ||||||||||||||||||||| | |||||||||| ||||    
T  31998198 actattataagcaaaactttgtattttatattcatttattaaatgatgtatgtgat 31998253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 3549788 - 3549878
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| | |  |||||| ||||||| |||||||||| |||| | | || |||||||||||||||||| ||||||| ||||    
T  3549788 actattataagcaaaaatctacattttagattcattcaattaatgatatatacggtctttattatagaccacatacattatttaatgaatg 3549878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 6508406 - 6508496
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| |||  || ||| ||||||| | ||||||||| | ||||| || |||||||||||||||||| ||| ||||||||    
T  6508406 actattataagcaaaaatttacatcttagattcattcatttaatgatgcacatgatctttattatagaccacatacattattaaataaatg 6508496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 14891869 - 14891779
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| |||  |||||| ||| ||  ||| ||||||||||||| | || ||||||||||| |||||||||||||| ||||    
T  14891869 actattataagcaaaaatttaaattttagatttatccaataaatgatgtatatggtctttattatagaccatatacatcatttaatgaatg 14891779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 23575449 - 23575359
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||| |||||||||||  ||  ||||||  |||||| | ||||||||| ||||||| || |||||||||||||||||||||| ||| ||||    
T  23575449 actaatataagtaaaaaattacattttaggttcattcatttaatgatgcatatgatctttattatagaccacatacatcattaaatgaatg 23575359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 33939428 - 33939338
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| |||  |||||| ||||||| | ||||||||| | ||| | || |||||||||||||||||||||| ||| ||||    
T  33939428 actattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaatg 33939338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 572 - 626
Target Start/End: Complemental strand, 50755278 - 50755224
Alignment:
Q  572 ttcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaa 626  Q
    |||||||||||||||||||||||||| || |||| | || |||||||||||||||    
T  50755278 ttcatttaattaatgatgtatatgatctttattacatacaacatacatcatttaa 50755224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 546 - 623
Target Start/End: Complemental strand, 2492603 - 2492526
Alignment:
Q  546 ttataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||||| |||| |||  |||||| || |||| ||| ||||||||||||||| || |||||| |||||||||||||||    
T  2492603 ttataagcaaaagtttacattttagatccattcaataaatgatgtatatgatctttattataaaccacatacatcatt 2492526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 563 - 632
Target Start/End: Complemental strand, 23394800 - 23394731
Alignment:
Q  563 tattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||| |||||||||||  ||||||||| ||||||  | | |||||||||||||||||||| ||||||    
T  23394800 tattttagattcatttaatagatgatgtatgtgatttataatgtagaccacatacatcatttattaaatg 23394731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 545 - 626
Target Start/End: Complemental strand, 35544661 - 35544580
Alignment:
Q  545 attataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaa 626  Q
    ||||||||||||| ||| ||||||| ||| ||| | | |||| ||||| || | || |||||||||||||||||||||||||    
T  35544661 attataagtaaaaatttatattttaaatttattcattaaatggtgtatgtggtcttcattatagaccacatacatcatttaa 35544580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 542 - 627
Target Start/End: Complemental strand, 41007808 - 41007723
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    ||||||||||| ||||||    |||||| ||||||| | | |||||||||| || | || ||||||||||||||||||||||||||    
T  41007808 actattataagcaaaattcaacattttagattcattcattaaatgatgtatgtggtctttattatagaccacatacatcatttaat 41007723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 544 - 632
Target Start/End: Complemental strand, 8466055 - 8465967
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||  |||| |||| |||||| ||||||||| |||||||||||| || | |  | || ||||||||||||||||| ||||||||    
T  8466055 tattataaacaaaactttgcattttagattcatttatttaatgatgtatgtggtctataataaagaccacatacatcattaaataaatg 8465967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 565 - 625
Target Start/End: Complemental strand, 9002837 - 9002777
Alignment:
Q  565 ttttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcattta 625  Q
    ||||| ||||||||||| |||||||||| |||| || ||| ||||| ||||||||||||||    
T  9002837 ttttagattcatttaataaatgatgtatgtgatctttattgtagacaacatacatcattta 9002777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 13043471 - 13043419
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatat 594  Q
    |||||||||||||||| ||  ||||||| ||||||| ||||||||||||||||    
T  13043471 actattataagtaaaaattaatattttagattcattcaattaatgatgtatat 13043419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 565 - 625
Target Start/End: Complemental strand, 29797880 - 29797820
Alignment:
Q  565 ttttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcattta 625  Q
    ||||| ||||| ||||| |||||||||| |||| || ||||| ||||||||||||||||||    
T  29797880 ttttaaattcacttaataaatgatgtatgtgatcttcattatggaccacatacatcattta 29797820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 564 - 632
Target Start/End: Complemental strand, 33289084 - 33289016
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||| ||||||||||||||| ||||||  || ||||||| ||||||| |||||||||| ||||    
T  33289084 attttagatttatttaattaatgatgcatatgaactttattataggccacataaatcatttaatgaatg 33289016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 567 - 623
Target Start/End: Complemental strand, 39216209 - 39216153
Alignment:
Q  567 ttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||||||||| ||||||||||||||||  | || ||||||||| ||||||||||||    
T  39216209 ttatattcattcaattaatgatgtatatagtctttattatagacaacatacatcatt 39216153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 564 - 627
Target Start/End: Original strand, 1597220 - 1597283
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    |||||| ||| ||| ||||||||||||||||||| || ||||| ||||| ||| ||||||||||    
T  1597220 attttaaatttattcaattaatgatgtatatgatctttattatcgaccatatatatcatttaat 1597283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 564 - 627
Target Start/End: Complemental strand, 14967334 - 14967271
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    |||||| ||||||| | | |||||||||| |||| || ||||||| ||||||||||||||||||    
T  14967334 attttagattcattcattaaatgatgtatgtgatctttattataggccacatacatcatttaat 14967271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 572 - 623
Target Start/End: Complemental strand, 17310519 - 17310468
Alignment:
Q  572 ttcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    |||||| |||||||||| ||||||||||  ||||||||||| ||||||||||    
T  17310519 ttcattcaattaatgatatatatgatttgtattatagaccatatacatcatt 17310468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 565 - 632
Target Start/End: Complemental strand, 31889151 - 31889084
Alignment:
Q  565 ttttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||| ||||||| | ||||||||| | ||| | || |||||||||||||||||||||| ||||||||    
T  31889151 ttttacattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaataaatg 31889084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 629
Target Start/End: Original strand, 36486548 - 36486635
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataa 629  Q
    |||| |||||| |||| |||  |||||| |||||||| || |||||||||||  || || |||||| |||| ||||||||||||||||    
T  36486548 actactataagcaaaaatttagattttagattcatttgatcaatgatgtatacaatctttattataaaccatatacatcatttaataa 36486635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 564 - 627
Target Start/End: Complemental strand, 38595751 - 38595688
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    |||||||||| ||||||||||||| ||||||| |||  |||||||||| |||| || |||||||    
T  38595751 attttatatttatttaattaatgaagtatatggtttatattatagaccgcatatattatttaat 38595688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 572 - 623
Target Start/End: Complemental strand, 48636819 - 48636768
Alignment:
Q  572 ttcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    |||||| | |||||||||||| ||||||  ||||||||||||||||||||||    
T  48636819 ttcattcagttaatgatgtatttgatttatattatagaccacatacatcatt 48636768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 534 - 631
Target Start/End: Complemental strand, 8397130 - 8397032
Alignment:
Q  534 ctctgataactattataagtaaaattttgtattttata-ttcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaat 631  Q
    ||||||| ||||||||||| ||||||   |||| || | || ||| |||||||||| ||||| || || |||||||| |||||| ||||||||||||||    
T  8397130 ctctgattactattataagcaaaattcaatattataaaatttattcaattaatgatatatataatctttattatagatcacatatatcatttaataaat 8397032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 537 - 623
Target Start/End: Original strand, 26344224 - 26344310
Alignment:
Q  537 tgataactattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    |||| ||||||||||| |||| | | ||||||| ||| ||||||||||| ||||||||  | || |||||||| || ||||||||||    
T  26344224 tgatcactattataagaaaaaatatatattttaaatttatttaattaataatgtatatagtctttattatagaacatatacatcatt 26344310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 565 - 623
Target Start/End: Complemental strand, 34598970 - 34598912
Alignment:
Q  565 ttttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||| ||||||| ||||||||||||||||||||   |||||  |||||||||||||||    
T  34598970 ttttagattcattcaattaatgatgtatatgattcatattatgaaccacatacatcatt 34598912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 546 - 627
Target Start/End: Complemental strand, 13877112 - 13877031
Alignment:
Q  546 ttataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    ||||||||||||||||  |||||| ||| ||| |||  || ||||||||||| || |||||| | || ||||||||||||||    
T  13877112 ttataagtaaaattttacattttagatttattcaatctataatgtatatgatctttattatatatcatatacatcatttaat 13877031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 554 - 595
Target Start/End: Original strand, 42166406 - 42166447
Alignment:
Q  554 aaaattttgtattttatattcatttaattaatgatgtatatg 595  Q
    ||||||||| |||||||||||||| ||||||| |||||||||    
T  42166406 aaaattttgcattttatattcattcaattaattatgtatatg 42166447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 542 - 595
Target Start/End: Complemental strand, 46412819 - 46412766
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatg 595  Q
    |||||||||||||||| |||  |||||  ||||||| |||||||||||||||||    
T  46412819 actattataagtaaaaatttacattttggattcattcaattaatgatgtatatg 46412766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 555 - 623
Target Start/End: Complemental strand, 31909867 - 31909799
Alignment:
Q  555 aaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||||| | |||||  |||||| |||||||||||||| || |||  | ||||||||||||||||||||    
T  31909867 aaattttattttttaggttcattcaattaatgatgtatgtggtttataatatagaccacatacatcatt 31909799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 555 - 623
Target Start/End: Original strand, 38824313 - 38824381
Alignment:
Q  555 aaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||||| | |||||| |||||| |||||||||||||| || ||   | ||||||||||||||||||||    
T  38824313 aaattttattttttatgttcattcaattaatgatgtatgtggttcataatatagaccacatacatcatt 38824381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 572 - 632
Target Start/End: Original strand, 41161504 - 41161564
Alignment:
Q  572 ttcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| | ||||||||| | ||||| || |||||||||||||||||||||| ||| ||||    
T  41161504 ttcattcatttaatgatgcacatgatctttattatagaccacatacatcattaaatgaatg 41161564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 555 - 623
Target Start/End: Complemental strand, 43384601 - 43384533
Alignment:
Q  555 aaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||||| | ||||| ||||||| ||| ||| |||||| || |||  ||||||||||||||||||||||    
T  43384601 aaattttatcttttagattcattcaatcaattatgtatgtggtttatattatagaccacatacatcatt 43384533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 1e-24; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 5816548 - 5816638
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| || |||||||| |||||| |||||||||| ||||    
T  5816548 actattataagcaaaactttgtattttaaattcatttaattaatgatgtatatgatctttattatagatcacatatatcatttaatgaatg 5816638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 544 - 627
Target Start/End: Original strand, 4484085 - 4484168
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    |||||||||||||| |||| |||||| ||||||| ||||||||||||||||| | || ||||||||||||||||||||||||||    
T  4484085 tattataagtaaaactttgcattttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaat 4484168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 549 - 631
Target Start/End: Complemental strand, 4708660 - 4708578
Alignment:
Q  549 taagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaat 631  Q
    |||| |||| ||| ||||||| ||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||    
T  4708660 taagaaaaaatttatattttaaattcatttaattaataatgtatatgatctttattatagaccacatacatcatttaataaat 4708578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 36072579 - 36072669
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| ||||||||| |||||| ||||||| |||| |||||||||||| | || ||||||||| |||||||||||||||| ||||    
T  36072579 actattataagcaaaattttgcattttagattcattcaatttatgatgtatatggtctttattatagactacatacatcatttaatgaatg 36072669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 544 - 632
Target Start/End: Complemental strand, 40952477 - 40952389
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||| |||| ||| ||||||| ||||||| ||||||  |||||||||||||| ||||||||||||||| |||||||||| ||||    
T  40952477 tattataagcaaaaatttatattttagattcattcaattaaatatgtatatgatttttattatagaccacatatatcatttaatgaatg 40952389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 545 - 632
Target Start/End: Original strand, 33693981 - 33694068
Alignment:
Q  545 attataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||| ||||||||| |||||| |||| || ||||||||||||||||| | || |||||||||||||||||| ||||||| ||||    
T  33693981 attataagcaaaattttgcattttagattcgttcaattaatgatgtatatggtctttattatagaccacatacataatttaatgaatg 33694068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 24798136 - 24798226
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||||||||| |||  |||||||||| ||| | |||||| |||||||||| || |||||||||||| ||||||||||||| ||||    
T  24798136 actattataagtaaaaatttacattttatatttattcatttaatggtgtatatgatctttattatagaccacgtacatcatttaatgaatg 24798226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 50686136 - 50686046
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||| ||||| || ||||| ||||||| ||||||| |||||| |||||||||||| || |||||||| ||||||||| ||||||||||||    
T  50686136 actatcataagcaacattttatattttagattcattcaattaacgatgtatatgatctttattatagatcacatacattatttaataaatg 50686046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 542 - 627
Target Start/End: Original strand, 3511718 - 3511803
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    |||| |||||| |||| |||  |||||| ||||||| ||||||||||||||||||| || |||||||||||||| |||||||||||    
T  3511718 actaatataagcaaaactttacattttagattcattcaattaatgatgtatatgatctttattatagaccacattcatcatttaat 3511803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 550 - 627
Target Start/End: Complemental strand, 8826988 - 8826911
Alignment:
Q  550 aagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    |||||||| |||| |||||| ||||||||| ||||||||||||||| | || |||||||| |||||||||||||||||    
T  8826988 aagtaaaactttgcattttagattcatttatttaatgatgtatatggtctttattatagatcacatacatcatttaat 8826911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 544 - 632
Target Start/End: Original strand, 55416311 - 55416397
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||||||| ||| ||||| | ||||||| ||||||||||||||||| |||  |||||||||||||||||| ||||||| ||||    
T  55416311 tattataagtaaaaatttatatttgagattcattcaattaatgatgtatatgcttt--attatagaccacatacattatttaatgaatg 55416397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 564 - 632
Target Start/End: Complemental strand, 19878395 - 19878327
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||||||||||||||||||||||||||| || ||||||| ||||||||||| |||||| ||||    
T  19878395 attttaaattcatttaattaatgatgtatatgatctttattatagtccacatacatcgtttaatgaatg 19878327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 564 - 632
Target Start/End: Complemental strand, 21113101 - 21113033
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| ||||||||||||||||||| ||||| |||||| |||||||| || ||||||||||||    
T  21113101 attttatattcgtttaattaatgatgtatattatttttattatataccacatatattatttaataaatg 21113033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 626
Target Start/End: Complemental strand, 26920803 - 26920719
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaa 626  Q
    |||||||||||||||| |||| |||||| ||||||| ||||||||||||| ||  | || |||||||||||| ||||||||||||    
T  26920803 actattataagtaaaactttgcattttagattcattcaattaatgatgtacatcgtctttattatagaccacgtacatcatttaa 26920719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 544 - 627
Target Start/End: Complemental strand, 4406370 - 4406287
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    ||||||||| |||| ||| ||||||  ||||||| |||||||||||||| || | || ||||||||||||||||||||||||||    
T  4406370 tattataagcaaaaatttatattttggattcattcaattaatgatgtatgtggtctttattatagaccacatacatcatttaat 4406287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 544 - 627
Target Start/End: Complemental strand, 21142219 - 21142136
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    ||||||||| |||| ||| ||||||| ||||||||||||||||||||||||| | || |||||| || | ||||||||||||||    
T  21142219 tattataagcaaaagtttatattttagattcatttaattaatgatgtatatggtctttattataaactaaatacatcatttaat 21142136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 550 - 632
Target Start/End: Original strand, 24448683 - 24448764
Alignment:
Q  550 aagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||||  ||||||||||||||||||||||||||||||||  | || |||||| | ||||||||||||||||| ||||    
T  24448683 aagtaaaattta-tattttatattcatttaattaatgatgtatatagtctttattataaatcacatacatcatttaattaatg 24448764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 538 - 627
Target Start/End: Original strand, 16170915 - 16171004
Alignment:
Q  538 gataactattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    ||||||||||||||  |||| |||  |||||| ||||||| |||||||| |||||||| | || ||||||||| ||||||||||||||||    
T  16170915 gataactattataaaaaaaactttacattttagattcattcaattaatggtgtatatggtctttattatagactacatacatcatttaat 16171004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 563 - 632
Target Start/End: Original strand, 32599510 - 32599579
Alignment:
Q  563 tattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| ||| ||||||| ||||||||| | || |||||| ||||||||||||||||||||||||    
T  32599510 tattttatatttattaaattaattatgtatatggtctttattataaaccacatacatcatttaataaatg 32599579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 563 - 632
Target Start/End: Original strand, 49231308 - 49231377
Alignment:
Q  563 tattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||| |||||||||||||||||| |||||||| || ||| |||||||||| ||||||||||| ||||    
T  49231308 tattttaaattcatttaattaatgatatatatgatctttattgtagaccacatgcatcatttaatgaatg 49231377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 33377546 - 33377494
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatat 594  Q
    ||||||||||||||||||||| |||||| ||||||| ||||||||||||||||    
T  33377546 actattataagtaaaattttgcattttagattcattcaattaatgatgtatat 33377494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 10572853 - 10572762
Alignment:
Q  542 actattataagtaaaatt-ttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||||||||   || |||| || ||| ||| ||||||||||||||||||| || |||||||||||||||||||||| ||| ||||    
T  10572853 actattataagtaaaaaacttatattatagatttattcaattaatgatgtatatgatctttattatagaccacatacatcattcaatgaatg 10572762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 545 - 632
Target Start/End: Original strand, 23071418 - 23071505
Alignment:
Q  545 attataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||||| ||| ||||||| ||||||| | ||||||||| | ||||| || ||||||||||| |||||||||| ||| ||||    
T  23071418 attataagtaaaaatttatattttagattcattcatttaatgatgcacatgatctttattatagaccatatacatcattaaatgaatg 23071505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 554 - 632
Target Start/End: Original strand, 38298111 - 38298189
Alignment:
Q  554 aaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||| ||||||| ||||||| ||||||||||||||||| | || |||||| ||||||||| ||| ||||| ||||    
T  38298111 aaaattttatattttagattcattcaattaatgatgtatatggtctttattataaaccacatacttcaattaatgaatg 38298189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 627
Target Start/End: Original strand, 18423913 - 18423986
Alignment:
Q  554 aaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    |||| ||| ||||||| ||||||| ||||||||||||||||||| || |||||| | || ||||||||||||||    
T  18423913 aaaaatttatattttagattcattcaattaatgatgtatatgatctttattataaatcatatacatcatttaat 18423986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 567 - 632
Target Start/End: Complemental strand, 25022624 - 25022559
Alignment:
Q  567 ttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||| |||||||||||||||||||||||  | || |||||||| ||||||||||||||||| ||||    
T  25022624 ttatgttcatttaattaatgatgtatattgtgtttattatagatcacatacatcatttaatgaatg 25022559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 542 - 627
Target Start/End: Original strand, 25138692 - 25138777
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    ||||||||||| |||| |||||||| || ||||||  ||||||||||||||||  | || |||||||||||| || ||||||||||    
T  25138692 actattataagcaaaactttgtattatagattcatgcaattaatgatgtatattgtctttattatagaccacgtatatcatttaat 25138777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 583 - 632
Target Start/End: Complemental strand, 39235227 - 39235178
Alignment:
Q  583 aatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||    
T  39235227 aatgatgtatatgatctttattataaaccacatacatcatttaataaatg 39235178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 544 - 625
Target Start/End: Complemental strand, 40051121 - 40051040
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcattta 625  Q
    |||||||||||||| |||  ||||||  |||||||| | |||||||||| || |||| | ||||||||||||||||||||||    
T  40051121 tattataagtaaaaatttacattttaacttcatttagtaaatgatgtatgtggtttttaatatagaccacatacatcattta 40051040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 566 - 631
Target Start/End: Complemental strand, 40881534 - 40881469
Alignment:
Q  566 tttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaat 631  Q
    |||| ||||||| ||||||||||||||||||| || ||||||   |||||||||||||||||||||    
T  40881534 tttagattcattcaattaatgatgtatatgatctttattatatgtcacatacatcatttaataaat 40881469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 542 - 627
Target Start/End: Original strand, 48603573 - 48603658
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    ||||||||||| || | | | ||||||| ||| ||| ||||||||||| ||||||| || |||||||| |||||||||||||||||    
T  48603573 actattataagcaagaatctatattttagatttattcaattaatgatgcatatgatctttattatagatcacatacatcatttaat 48603658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 564 - 632
Target Start/End: Complemental strand, 18626816 - 18626748
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||| ||| ||||||||||| ||||||| || |||||| ||||||||||||||||||| ||||    
T  18626816 attttagatttattcaattaatgatgcatatgatctttattataaaccacatacatcatttaatgaatg 18626748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 537 - 625
Target Start/End: Original strand, 19596002 - 19596090
Alignment:
Q  537 tgataactattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcattta 625  Q
    |||| |||||||||||||||| ||  |||||||  |||||||||| |||||||||| ||||||| | |||||| || ||| ||||||||    
T  19596002 tgattactattataagtaaaaattgatattttaggttcatttaataaatgatgtatttgatttttaatatagatcatatatatcattta 19596090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 627
Target Start/End: Complemental strand, 21649462 - 21649379
Alignment:
Q  546 ttataagtaaaattttgtattttatattcattt--aattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    ||||||| |||||| | ||||||| |||||| |  ||||||||||||| ||||| || ||||||||||||||| ||||||||||    
T  21649462 ttataagcaaaattctatattttaaattcatattcaattaatgatgtacatgatctttattatagaccacatatatcatttaat 21649379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 563 - 631
Target Start/End: Original strand, 30035211 - 30035279
Alignment:
Q  563 tattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaat 631  Q
    ||||||| | ||||||||||||  ||||||||||| || ||||| |||||| |||||||||||||||||    
T  30035211 tattttagactcatttaattaagtatgtatatgatctttattatcgaccacgtacatcatttaataaat 30035279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 632
Target Start/End: Original strand, 51232310 - 51232370
Alignment:
Q  572 ttcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||| ||||||||| | ||||| || |||||||||||||||||||||| ||||||||    
T  51232310 ttcatttatttaatgatgcacatgatctttattatagaccacatacatcattaaataaatg 51232370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 576 - 627
Target Start/End: Complemental strand, 23004059 - 23004008
Alignment:
Q  576 tttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    |||||||||||||||||||||| || ||||||||| |||||||| |||||||    
T  23004059 tttaattaatgatgtatatgatctttattatagactacatacattatttaat 23004008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 538 - 625
Target Start/End: Original strand, 31262599 - 31262686
Alignment:
Q  538 gataactattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcattta 625  Q
    |||||||| |||||| |||||||  ||||||||||| ||||||| |||||||||| |||| |  |||| |||| ||||| ||||||||    
T  31262599 gataactaatataagcaaaatttaatattttatattaatttaataaatgatgtatgtgatctatattaaagactacatatatcattta 31262686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 564 - 627
Target Start/End: Original strand, 39533787 - 39533850
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    |||||| ||||||||| | |||||||||||| || || |||||||| |||||||||||||||||    
T  39533787 attttagattcatttattaaatgatgtatataatctttattatagatcacatacatcatttaat 39533850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 542 - 633
Target Start/End: Original strand, 49481889 - 49481980
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatgt 633  Q
    ||||||||||| |||| |||  |||||| ||||||| | ||||||||| | ||| | || |||||||||||||||||||||| ||| |||||    
T  49481889 actattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaatgt 49481980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 554 - 632
Target Start/End: Original strand, 22493597 - 22493675
Alignment:
Q  554 aaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||| |||||||| |  ||| ||| |||| |||||||||||| | || |||||||| ||||||||||||||||||||||    
T  22493597 aaaaatttgtattatggatttattcaattgatgatgtatatggtctttattatagatcacatacatcatttaataaatg 22493675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 544 - 609
Target Start/End: Complemental strand, 7740619 - 7740554
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattataga 609  Q
    ||||||||| |||| ||| ||||||| ||||||| |||||||||||||| |||| || ||||||||    
T  7740619 tattataagcaaaaatttatattttaaattcattaaattaatgatgtatgtgatctttattataga 7740554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 563 - 632
Target Start/End: Original strand, 54931849 - 54931918
Alignment:
Q  563 tattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||| ||| ||| ||||||| |||||||||||||| |||||| |||  |||||||||||||| ||||    
T  54931849 tattttaaatttattcaattaattatgtatatgatttttattatataccgtatacatcatttaatgaatg 54931918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 555 - 623
Target Start/End: Original strand, 21003962 - 21004030
Alignment:
Q  555 aaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||||||  |||||  |||||| ||||||||||||||||| | |  ||||||||||||||||||||||    
T  21003962 aaattttgacttttaagttcattcaattaatgatgtatatggtctacattatagaccacatacatcatt 21004030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 564 - 624
Target Start/End: Original strand, 36786181 - 36786241
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcattt 624  Q
    |||||| ||||||| ||||||||||||||||  | || |||||| ||||||||||||||||    
T  36786181 attttagattcattcaattaatgatgtatatagtctttattataaaccacatacatcattt 36786241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 564 - 632
Target Start/End: Complemental strand, 40575948 - 40575880
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||| ||| ||||||| |||||||||||||| |||||| | || |||||| ||||||||||||    
T  40575948 attttagatttattcaattaataatgtatatgatttttattatatatcatatacattatttaataaatg 40575880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 555 - 627
Target Start/End: Complemental strand, 41654618 - 41654546
Alignment:
Q  555 aaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    |||||||  |||||| ||||||| |  |||||||||||||||| || ||||||||||| |||||||| |||||    
T  41654618 aaattttacattttagattcattaacgtaatgatgtatatgatatttattatagaccatatacatcaattaat 41654546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 565 - 632
Target Start/End: Original strand, 11511700 - 11511767
Alignment:
Q  565 ttttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||| |||| |||||||||||||||||||| |||  ||| | |||||||||||||||| | ||||||    
T  11511700 ttttagattcgtttaattaatgatgtatatggtttatattgtggaccacatacatcattaattaaatg 11511767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 589
Target Start/End: Original strand, 41346476 - 41346523
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatg 589  Q
    |||||||||||||||| ||| ||||||| ||||||||| |||||||||    
T  41346476 actattataagtaaaaatttatattttagattcatttatttaatgatg 41346523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 556 - 595
Target Start/End: Original strand, 44551221 - 44551260
Alignment:
Q  556 aattttgtattttatattcatttaattaatgatgtatatg 595  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  44551221 aattttgtcttttatattcattgaattaatgatgtatatg 44551260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 566 - 625
Target Start/End: Complemental strand, 54057750 - 54057691
Alignment:
Q  566 tttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcattta 625  Q
    ||||||||||| ||||||||||| ||| || |||| |||||| |||||| ||||||||||    
T  54057750 tttatattcatataattaatgatttatgtggtttttattataaaccacaaacatcattta 54057691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 579 - 625
Target Start/End: Original strand, 10308286 - 10308332
Alignment:
Q  579 aattaatgatgtatatgattttgattatagaccacatacatcattta 625  Q
    ||||||||||||||||  | || ||||||||||||||||||||||||    
T  10308286 aattaatgatgtatatagtctttattatagaccacatacatcattta 10308332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 545 - 623
Target Start/End: Original strand, 20542816 - 20542893
Alignment:
Q  545 attataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    |||||||||||| |||||  ||||| ||||||| |||||||||||||| ||  ||  | ||||||||||||||||||||    
T  20542816 attataagtaaa-ttttgatttttagattcattcaattaatgatgtatgtgggttataatatagaccacatacatcatt 20542893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 565 - 623
Target Start/End: Original strand, 24275249 - 24275307
Alignment:
Q  565 ttttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||| ||||||| ||||||| ||||||||| | |  ||||||||||||||||||||||    
T  24275249 ttttagattcattcaattaattatgtatatggtctacattatagaccacatacatcatt 24275307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 565 - 623
Target Start/End: Original strand, 33118230 - 33118288
Alignment:
Q  565 ttttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||| ||||||||||  |||||||||| |||| |  ||||||||||||||||||||||    
T  33118230 ttttaaattcatttaacaaatgatgtatgtgatctatattatagaccacatacatcatt 33118288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 53176439 - 53176349
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| ||| ||||||| ||||||| | |||||| ||||| |||| ||  ||||| |  |||||||||||||||| ||||    
T  53176439 actattataagcaaaaatttatattttagattcattcagttaatgttgtatttgatcttttttataaataacatacatcatttaatgaatg 53176349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 547 - 625
Target Start/End: Complemental strand, 54106601 - 54106523
Alignment:
Q  547 tataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcattta 625  Q
    |||||| |||| ||| | ||||| ||||||| ||| |||||||||| |||| || ||| ||||| ||||||||||||||    
T  54106601 tataagcaaaaatttatgttttagattcattcaataaatgatgtatgtgatctttattgtagacaacatacatcattta 54106523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 54713107 - 54713197
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| |||  |||||| ||||||| | ||||||||| | ||| | || ||| |||||||||||||||||| ||| ||||    
T  54713107 actattataagcaaaaatttacattttagattcattcatttaatgatgcacatggtctttattgtagaccacatacatcattaaatgaatg 54713197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 542 - 627
Target Start/End: Complemental strand, 2582939 - 2582854
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    |||||||||||||||  ||  ||||||| ||||||| | | ||| |||| |||||  || ||||||||| ||||||||||||||||    
T  2582939 actattataagtaaatattaatattttagattcattcattaaattatgtttatgacctttattatagactacatacatcatttaat 2582854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 573 - 626
Target Start/End: Complemental strand, 24870457 - 24870404
Alignment:
Q  573 tcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaa 626  Q
    ||||| ||||||| ||||||||| | || |||||||||||||| ||||||||||    
T  24870457 tcattcaattaattatgtatatggtatttattatagaccacatgcatcatttaa 24870404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 632
Target Start/End: Original strand, 26164787 - 26164840
Alignment:
Q  579 aattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||||||||  |||| ||||||||| ||||  |||||||||||||||    
T  26164787 aattaatgatgtatatagtttttattatagacaacatgtatcatttaataaatg 26164840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 535 - 592
Target Start/End: Complemental strand, 32599618 - 32599561
Alignment:
Q  535 tctgataactattataagtaaaattttgtattttatattcatttaattaatgatgtat 592  Q
    |||||| |||||||||||||||| ||  ||||||| ||||||||| | ||||||||||    
T  32599618 tctgatcactattataagtaaaaattaatattttagattcatttattaaatgatgtat 32599561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 554 - 627
Target Start/End: Original strand, 46803429 - 46803502
Alignment:
Q  554 aaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    |||||| | ||||||| ||||||| ||||||| ||||||||  | || |||||| ||||||||||| |||||||    
T  46803429 aaaattatatattttagattcattaaattaattatgtatatagtctttattataaaccacatacataatttaat 46803502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 555 - 632
Target Start/End: Original strand, 49745485 - 49745562
Alignment:
Q  555 aaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||| | |||||| |||||| |||||||||||||| || |||  | ||| |||||||||||||||| | ||||||    
T  49745485 aaattttattttttatgttcattcaattaatgatgtatgtggtttataatatggaccacatacatcattaattaaatg 49745562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 583 - 632
Target Start/End: Original strand, 52914048 - 52914097
Alignment:
Q  583 aatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||||  | || |||||||||||||||||||||||||| ||||    
T  52914048 aatgatgtatatagtctttattatagaccacatacatcatttaatgaatg 52914097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 572 - 632
Target Start/End: Complemental strand, 2441011 - 2440951
Alignment:
Q  572 ttcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| | ||||||||| | ||| | || |||||||||||||||||||||| ||||||||    
T  2441011 ttcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaataaatg 2440951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 571 - 627
Target Start/End: Complemental strand, 12912711 - 12912655
Alignment:
Q  571 attcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    ||||||| | |||||||  ||||||||||| |||||| |||| ||||||||||||||    
T  12912711 attcattcacttaatgacatatatgatttttattatataccatatacatcatttaat 12912655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 632
Target Start/End: Complemental strand, 16468313 - 16468245
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||| ||| | ||||||||  | ||||| || |||||||||||||||||||||| ||||||||    
T  16468313 attttagatttattcatttaatgattcacatgatctttattatagaccacatacatcattaaataaatg 16468245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 35151792 - 35151740
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatat 594  Q
    ||||||||||  |||| ||||||||||| ||||||| |||| |||||||||||    
T  35151792 actattataaacaaaactttgtattttagattcattcaattgatgatgtatat 35151740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 575 - 619
Target Start/End: Original strand, 37175474 - 37175518
Alignment:
Q  575 atttaattaatgatgtatatgattttgattatagaccacatacat 619  Q
    |||||||||||||||||| ||||||  ||||| ||||||||||||    
T  37175474 atttaattaatgatgtatgtgatttatattatggaccacatacat 37175518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 44551292 - 44551248
Alignment:
Q  579 aattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    |||||||||||||||||||||  ||||| ||||| ||||||||||    
T  44551292 aattaatgatgtatatgatttatattatggaccatatacatcatt 44551248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 555 - 623
Target Start/End: Original strand, 54787004 - 54787072
Alignment:
Q  555 aaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||||||  |||||  |||||| ||| |||||||||| || |||  ||||||||||||||||||||||    
T  54787004 aaattttgacttttaggttcattcaatcaatgatgtatgtggtttatattatagaccacatacatcatt 54787072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 632
Target Start/End: Original strand, 55936018 - 55936086
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||||||| | | ||||||||||||  | || ||||| |||||||||||||||||||| ||||    
T  55936018 attttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatg 55936086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 632
Target Start/End: Complemental strand, 56328559 - 56328491
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||||||| | ||||||||| ||||  | || |||||||||||||||||||||| ||| ||||    
T  56328559 attttagattcattcatttaatgatgcatatagtctttattatagaccacatacatcattaaatgaatg 56328491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 3e-22; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 2805944 - 2805854
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||| |||||||||  |||||| ||||||| ||||||| ||||||||||| || ||||||||||||||| |||||||||||||||    
T  2805944 actattataaataaaattttacattttaaattcattcaattaataatgtatatgatctttattatagaccacatatatcatttaataaatg 2805854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 10117101 - 10117011
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| |||  |||||| ||||||| ||||||||||||||||||| || |||||||||||||||||||||||||| ||||    
T  10117101 actattataagcaaaaatttacattttagattcattcaattaatgatgtatatgatatttattatagaccacatacatcatttaatgaatg 10117011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 14700250 - 14700340
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||||||||||||||||||||| ||||||| | || ||||| |||||| | || |||||||||||||||||| ||||||||||||    
T  14700250 actattataagtaaaattttgtattttagattcattcatttgatgatatatatgttatttattatagaccacatacattatttaataaatg 14700340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 2296605 - 2296515
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||||||||||||| |||||| ||||||| ||||||| ||||| ||| | || ||||||||||| |||||||||||||| ||||    
T  2296605 actattataagtaaaattttgcattttagattcattcaattaataatgtacatggtctttattatagaccatatacatcatttaatgaatg 2296515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 7258716 - 7258626
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||||||||||||  |||||| ||||||| ||||||||||| ||||| | || |||||||||||||||||| ||||||| ||||    
T  7258716 actattataagtaaaattttacattttagattcattcaattaatgatgcatatggtctttattatagaccacatacattatttaatgaatg 7258626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 29360879 - 29360789
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| ||||||||| |||||||||||||||||||||| ||||||||| | ||  ||||||| || |||||||||||||| ||||    
T  29360879 actattataagcaaaattttgcattttatattcatttaattaataatgtatatggtctttgttatagatcatatacatcatttaatgaatg 29360789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 544 - 632
Target Start/End: Complemental strand, 9015945 - 9015857
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||||||| | | ||||||| ||||||| ||||||||||||||||||| || |||||||||| ||||| || |||||||||||    
T  9015945 tattataagtaaaaatctatattttagattcattcaattaatgatgtatatgatctttattatagacctcatacgtcctttaataaatg 9015857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 545 - 632
Target Start/End: Complemental strand, 34580700 - 34580613
Alignment:
Q  545 attataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||| |||| |||||||||||||||| || ||||||||||||||||| | || |||||| ||||||||||| ||||||| ||||    
T  34580700 attataagcaaaactttgtattttatattctttcaattaatgatgtatatggtctttattataaaccacatacataatttaatgaatg 34580613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 33070296 - 33070206
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| ||||||||| |||||| ||||||| | |||||| |||||||| | || ||||||||| |||||||||||||||| ||||    
T  33070296 actattataagcaaaattttgcattttagattcattcatttaatggtgtatatggtctttattatagactacatacatcatttaatgaatg 33070206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 542 - 623
Target Start/End: Complemental strand, 34326376 - 34326295
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||||||||||||||||||| |||||| ||||||| ||||||||||||||||  | || |||||| || ||||||||||||    
T  34326376 actattataagtaaaattttgcattttacattcattcaattaatgatgtatatagtctttattataaacaacatacatcatt 34326295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 542 - 631
Target Start/End: Original strand, 36916592 - 36916681
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaat 631  Q
    ||||||||||||||||||||| |||||| ||| ||| |||||||||| ||| |  | || |||||||||||||||||| |||||||||||    
T  36916592 actattataagtaaaattttgcattttagatttattcaattaatgatatatttagtctttattatagaccacatacattatttaataaat 36916681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 564 - 632
Target Start/End: Original strand, 3225811 - 3225879
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||| ||| ||||||||||||||||||| || |||||||||||||||||||||||||| ||||    
T  3225811 attttaaatttattcaattaatgatgtatatgatctttattatagaccacatacatcatttaatgaatg 3225879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 544 - 632
Target Start/End: Complemental strand, 24287914 - 24287826
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||||||| |||| |||||| ||| ||| | ||||||||||||||| | || ||||||||||| |||||||||||||| ||||    
T  24287914 tattataagtaaaactttgcattttagatttattcagttaatgatgtatatggtctttattatagaccatatacatcatttaatgaatg 24287826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 564 - 627
Target Start/End: Original strand, 18603489 - 18603552
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    |||||| ||||||||||||||| ||||||||||| || |||||| |||||||||||||||||||    
T  18603489 attttagattcatttaattaataatgtatatgatctttattatataccacatacatcatttaat 18603552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 550 - 632
Target Start/End: Original strand, 35874483 - 35874564
Alignment:
Q  550 aagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||||  ||||||||||||||||||||||||||||||||  | || |||||| | ||||||||||||||||| ||||    
T  35874483 aagtaaaattta-tattttatattcatttaattaatgatgtatatagtctttattataaatcacatacatcatttaattaatg 35874564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 542 - 627
Target Start/End: Original strand, 24017727 - 24017812
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    ||||||||||| |||| ||   |||||| |||| || ||||||||||||||||||| || |||| |||||||||||||||||||||    
T  24017727 actattataagcaaaaattaccattttaaattccttcaattaatgatgtatatgatctttattacagaccacatacatcatttaat 24017812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 543 - 632
Target Start/End: Complemental strand, 40640408 - 40640319
Alignment:
Q  543 ctattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||| |||| |||| |||||| ||||||| ||||||||||||| ||  | || |||||||||||| ||||||||||||| ||||    
T  40640408 ctattataagcaaaactttgcattttagattcattcaattaatgatgtacatagtctttattatagaccacgtacatcatttaatgaatg 40640319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 544 - 632
Target Start/End: Complemental strand, 11335696 - 11335608
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||| |||| |||| |||||| ||||||| ||||||| ||||||||||| ||  ||| ||| ||||||||||||||||| ||||    
T  11335696 tattataagcaaaactttgcattttagattcattcaattaataatgtatatgatctttgttagagagcacatacatcatttaatgaatg 11335608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 564 - 631
Target Start/End: Original strand, 25268006 - 25268072
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaat 631  Q
    |||||| |||||||||||||||||| |||||||| || |||||| |||| ||||||||||||||||||    
T  25268006 attttagattcatttaattaatgat-tatatgatctttattataaaccatatacatcatttaataaat 25268072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 564 - 631
Target Start/End: Complemental strand, 33385280 - 33385213
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaat 631  Q
    |||||| ||||||| |||||||||| ||||| || || ||||||||||||||||||||||||| ||||    
T  33385280 attttagattcattcaattaatgatatatataatatttattatagaccacatacatcatttaaaaaat 33385213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 10934612 - 10934702
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| ||||   | ||||||| |||||||||||||||||||||| |  | || ||| |||||||||||||||||||||| ||||    
T  10934612 actattataagcaaaaaactatattttacattcatttaattaatgatgtatgtagtctttattgtagaccacatacatcatttaatgaatg 10934702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 571 - 632
Target Start/End: Complemental strand, 5888438 - 5888377
Alignment:
Q  571 attcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||| ||||||||||||||||| | || ||||||||| |||||||||||||||| ||||    
T  5888438 attcattcaattaatgatgtatatggtctttattatagacaacatacatcatttaatgaatg 5888377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 534 - 625
Target Start/End: Complemental strand, 45045516 - 45045425
Alignment:
Q  534 ctctgataactattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcattta 625  Q
    ||||||| ||||||||||  |||| | | ||||||| ||||||| ||||||||||||||||| | || ||||||||| || ||||| |||||    
T  45045516 ctctgatcactattataaacaaaaatctatattttagattcattcaattaatgatgtatatggtctttattatagactacgtacataattta 45045425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 546 - 632
Target Start/End: Complemental strand, 2382713 - 2382627
Alignment:
Q  546 ttataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||| |||| |||| |||| | || |||| | |||||||| |||||||| || ||||||||||| |||||||||||||| ||||    
T  2382713 ttataagcaaaactttgcatttcagatacattcatttaatgatatatatgatctttattatagaccaaatacatcatttaatgaatg 2382627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 592
Target Start/End: Complemental strand, 14700372 - 14700322
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtat 592  Q
    |||||||||||||||||||||||||||| ||||||||| | ||| ||||||    
T  14700372 actattataagtaaaattttgtattttagattcatttattaaataatgtat 14700322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 535 - 632
Target Start/End: Complemental strand, 6614823 - 6614726
Alignment:
Q  535 tctgataactattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| |||||||||||||||| | | |||||| |||| ||| ||||||| || |||||  | || ||||||||||||||| || ||||| ||||||    
T  6614823 tctgatcactattataagtaaaaatctatattttctatttattcaattaattatatatattgtctttattatagaccacatatataatttagtaaatg 6614726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 564 - 632
Target Start/End: Complemental strand, 13080197 - 13080129
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||||||| |||||||||||||| || | || |||| |||| |||||||||||||||| ||||    
T  13080197 attttacattcattgaattaatgatgtatgtggtctttattaaagactacatacatcatttaatgaatg 13080129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 580 - 623
Target Start/End: Original strand, 9203431 - 9203474
Alignment:
Q  580 attaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    |||||||||||||||||||   ||||||||||||||||||||||    
T  9203431 attaatgatgtatatgattcatattatagaccacatacatcatt 9203474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 572 - 623
Target Start/End: Complemental strand, 35063561 - 35063510
Alignment:
Q  572 ttcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||||||||||||||||||| || ||   ||||||||||||||||||||||    
T  35063561 ttcatttaattaatgatgtatgtggttcatattatagaccacatacatcatt 35063510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 13290044 - 13290134
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| ||||  ||  |||||  ||||||| |||||||  |||||||| | || ||||||||||||||| |||||||||| ||||    
T  13290044 actattataagcaaaaaattacattttggattcattcaattaatagtgtatatggtcttcattatagaccacatatatcatttaatgaatg 13290134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 13496566 - 13496476
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| |||  |||||| ||||||| | ||||||||| | ||| | || ||||||||||| |||||||||| ||| ||||    
T  13496566 actattataagcaaaaatttacattttaaattcattcatttaatgatgcacatggtctttattatagaccaaatacatcattaaatgaatg 13496476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 23627675 - 23627765
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| | ||||||||| ||| ||| | ||||||||||| ||  | || ||| |||||||||||||||||| ||| ||||    
T  23627675 actattataagcaaaaatctgtattttagatttattcatttaatgatgtacatagtctttattttagaccacatacatcattaaatgaatg 23627765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 565 - 623
Target Start/End: Complemental strand, 29916239 - 29916181
Alignment:
Q  565 ttttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||| ||||||| |||| |||||||||||||| |  ||||||||| ||||||||||||    
T  29916239 ttttagattcattcaattgatgatgtatatgatctatattatagactacatacatcatt 29916181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 597
Target Start/End: Original strand, 29360759 - 29360812
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgat 597  Q
    ||||||||| |||| ||||||||||| ||||||| | | |||||||||||||||    
T  29360759 tattataagaaaaactttgtattttagattcattcattaaatgatgtatatgat 29360812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 582 - 631
Target Start/End: Original strand, 44319578 - 44319627
Alignment:
Q  582 taatgatgtatatgattttgattatagaccacatacatcatttaataaat 631  Q
    ||||||||||| || | || ||||||||| ||||||||||||||||||||    
T  44319578 taatgatgtatgtggtctttattatagactacatacatcatttaataaat 44319627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 580 - 632
Target Start/End: Complemental strand, 2116199 - 2116147
Alignment:
Q  580 attaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||| | ||||| || |||||||||||||||||||||| ||| ||||    
T  2116199 attaatgatgcacatgatctttattatagaccacatacatcattaaatgaatg 2116147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 632
Target Start/End: Original strand, 7484648 - 7484716
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||||||| | | ||||||||||||  | || ||||| |||||||||||||||||||| ||||    
T  7484648 attttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatg 7484716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 555 - 623
Target Start/End: Original strand, 19293038 - 19293106
Alignment:
Q  555 aaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||||||  |||||  |||||| ||| |||||||||| || |||  ||||||||||||||||||||||    
T  19293038 aaattttgacttttaggttcattcaatcaatgatgtatgtggtttatattatagaccacatacatcatt 19293106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 632
Target Start/End: Complemental strand, 24053706 - 24053638
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||| |||||| | ||||||||| | ||| | || |||||||||||||||||||||| ||| ||||    
T  24053706 attttatgttcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaatg 24053638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 572 - 632
Target Start/End: Original strand, 32016813 - 32016873
Alignment:
Q  572 ttcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||| |||||||||||||||||    |||||| ||||||||||||||| ||| ||||    
T  32016813 ttcatttatttaatgatgtatatgatacatattataaaccacatacatcattaaatgaatg 32016873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 620
Target Start/End: Complemental strand, 38949077 - 38949021
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatc 620  Q
    |||||| ||||||| | ||||||||| | |||||||| |||||| ||||||||||||    
T  38949077 attttagattcattcatttaatgatgcacatgatttttattatataccacatacatc 38949021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 44521379 - 44521327
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatat 594  Q
    ||||||||||| |||| |||| |||||| ||||||| |||||||| |||||||    
T  44521379 actattataagcaaaactttgaattttagattcattcaattaatggtgtatat 44521327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 3e-22; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 23797479 - 23797389
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||||||||||||| |||||| ||||||| |||||||||||||| || | || ||||||||| |||||||||||||||| ||||    
T  23797479 actattataagtaaaattttgcattttagattcattcaattaatgatgtatctggtctttattatagactacatacatcatttaatgaatg 23797389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 43103203 - 43103113
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||||||||||| ||||| | ||||| |  ||||||||||||||||||||    
T  43103203 actattataagtaaaattttatattttagatttatttaattaatgatgtatataatttttaatatagtctgcatacatcatttaataaatg 43103113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 543 - 632
Target Start/End: Complemental strand, 21586944 - 21586855
Alignment:
Q  543 ctattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||||||| |   ||||||| ||||||| ||||||||||||||||||| || |||||||||||||||||||||| ||||||||    
T  21586944 ctattataagtaaaaatcaatattttagattcattcaattaatgatgtatatgatctttattatagaccacatacatcattgaataaatg 21586855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 6847285 - 6847375
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| |||| |||||||||| ||| ||||||||||||||||||| || ||||| || ||||||||| ||||||| ||||    
T  6847285 actattataagcaaaaatttgcattttatatttattcaattaatgatgtatatgatctttattatggaacacatacataatttaatgaatg 6847375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 626
Target Start/End: Complemental strand, 24280952 - 24280868
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaa 626  Q
    |||||||||||||||| | |  |||||| ||||||| |||||||||||||||| || || |||||||||||||||||| ||||||    
T  24280952 actattataagtaaaaatctacattttaaattcattcaattaatgatgtatataatatttattatagaccacatacattatttaa 24280868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 554 - 632
Target Start/End: Original strand, 26904802 - 26904880
Alignment:
Q  554 aaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||| ||| |||||||  |||||| ||||||||||||||| ||| || |||||||||||||||||||||| ||||||||    
T  26904802 aaaaatttatattttactttcattcaattaatgatgtatacgatctttattatagaccacatacatcattaaataaatg 26904880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 546 - 632
Target Start/End: Complemental strand, 30138915 - 30138829
Alignment:
Q  546 ttataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||||| |||  |||||| ||||||| ||||||||||||||||  | || ||||||||||||| |||||||||||| ||||    
T  30138915 ttataagtaaaaatttacattttagattcattcaattaatgatgtatatagtctttattatagaccacacacatcatttaatgaatg 30138829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 542 - 631
Target Start/End: Complemental strand, 12088942 - 12088853
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaat 631  Q
    ||||||||||||||||||||| |||| | ||||||| |||||||| |||||||  | || || |||||||| | ||||||||||||||||    
T  12088942 actattataagtaaaattttgcatttaagattcattcaattaatgttgtatatagtctttatcatagaccatacacatcatttaataaat 12088853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 544 - 632
Target Start/End: Complemental strand, 16872067 - 16871980
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||||||| ||||||||| | ||||||||||||||| |||||||| || || |||||| | |||||| ||||| |||||||||    
T  16872067 tattataagtaaaaatttgtattt-agattcatttaattaattatgtatataatatttattataaatcacataaatcatgtaataaatg 16871980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 554 - 632
Target Start/End: Complemental strand, 4089908 - 4089830
Alignment:
Q  554 aaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||| ||| ||||||||||||||| ||||||||||||||||| | || ||||| || || |||||||||||||| ||||    
T  4089908 aaaaatttatattttatattcattcaattaatgatgtatatggtctttattatggagcatatacatcatttaatgaatg 4089830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 9555269 - 9555359
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||| ||||||||||||||  |||||| ||| ||| ||||||||||||||||  | || || ||| ||||||||||||||||||| ||||    
T  9555269 actatcataagtaaaattttacattttaaatttattcaattaatgatgtatatagtctttatcataaaccacatacatcatttaatgaatg 9555359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 542 - 631
Target Start/End: Complemental strand, 26477292 - 26477203
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaat 631  Q
    ||||||||||  |||| ||| ||||| | ||| ||||||||||||||||||||||| || | |||| |||| ||||| ||||||||||||    
T  26477292 actattataaacaaaaatttatatttaagatttatttaattaatgatgtatatgatctttaatataaaccatatacaccatttaataaat 26477203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 542 - 631
Target Start/End: Complemental strand, 26553732 - 26553643
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaat 631  Q
    ||||||||||  |||| ||| ||||| | ||| ||||||||||||||||||||||| || | |||| |||| ||||| ||||||||||||    
T  26553732 actattataaacaaaaatttatatttaagatttatttaattaatgatgtatatgatctttaatataaaccatatacaccatttaataaat 26553643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 563 - 632
Target Start/End: Complemental strand, 32549931 - 32549862
Alignment:
Q  563 tattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||| ||||||| ||| |||||||||| |||| || | |||||||||||||||||||||| ||||||    
T  32549931 tattttagattcattcaataaatgatgtatgtgatctttaatatagaccacatacatcatttattaaatg 32549862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 564 - 624
Target Start/End: Complemental strand, 46495477 - 46495417
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcattt 624  Q
    |||||| ||| |||||||||||||||||||| || || ||||||||| |||||||||||||    
T  46495477 attttaaatttatttaattaatgatgtatattatctttattatagactacatacatcattt 46495417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 577 - 628
Target Start/End: Original strand, 35238983 - 35239034
Alignment:
Q  577 ttaattaatgatgtatatgattttgattatagaccacatacatcatttaata 628  Q
    ||||||||| ||||||||||| || |||| ||||||||||||||||||||||    
T  35238983 ttaattaataatgtatatgatctttattacagaccacatacatcatttaata 35239034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 2943343 - 2943253
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| ||||  || ||||||| ||||||| ||||||| |||||| |  | || ||| |||||||||||||||||||||| ||||    
T  2943343 actattataagcaaaaaattatattttacattcattcaattaataatgtatgtactctttattgtagaccacatacatcatttaatgaatg 2943253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 6455558 - 6455648
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| |||  |||||| ||||||| | ||||||||| | ||| | || |||||||||||||||||||||| ||| ||||    
T  6455558 actattataagcaaaaatttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaatg 6455648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 11002447 - 11002357
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||||||||| | |  |||||| ||||||| | ||||||||| | ||| | ||  ||||||||||||||||||||| ||||||||    
T  11002447 actattataagtaaaaatctacattttagattcattcatttaatgatgcacatggtcttttttatagaccacatacatcattaaataaatg 11002357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 26385727 - 26385673
Alignment:
Q  571 attcatttaattaatgatgtatatgattttgattatagaccacatacatcattta 625  Q
    |||||||||||||||||||||| || | || |||||||||||||||||| |||||    
T  26385727 attcatttaattaatgatgtatgtggtctttattatagaccacatacataattta 26385673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 561 - 631
Target Start/End: Original strand, 28289452 - 28289522
Alignment:
Q  561 tgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaat 631  Q
    |||||||||||||| || ||||||||||||||||||| || ||  || ||||||| ||||| |||||||||    
T  28289452 tgtattttatattcgttcaattaatgatgtatatgatctttatcgtaaaccacatgcatcacttaataaat 28289522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 32490720 - 32490630
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||  ||||||||| |||| | |||||||  |||||||||||||||  | || ||||||||| |||||||||||| | ||||||    
T  32490720 actattataaacaaaattttgcatttcacattcattccattaatgatgtatatagtctttattatagacaacatacatcattaattaaatg 32490630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 564 - 632
Target Start/End: Original strand, 3882582 - 3882650
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||||||| |||||||| ||||| | || |||||||||||||||||| || ||||||| ||||    
T  3882582 attttagattcattcaattaatggtgtatttaatcttgattatagaccacatatataatttaatgaatg 3882650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 564 - 632
Target Start/End: Complemental strand, 10095828 - 10095760
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||| ||||| ||||| ||||||||| | || || ||||||||||||||||||||||| ||||    
T  10095828 attttagatttatttatttaattatgtatatggtctttatcatagaccacatacatcatttaatgaatg 10095760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 575 - 627
Target Start/End: Complemental strand, 21096285 - 21096233
Alignment:
Q  575 atttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    ||||||||||||||||||||||| || |||||||| |||||| || |||||||    
T  21096285 atttaattaatgatgtatatgatatttattatagatcacatatattatttaat 21096233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 555 - 623
Target Start/End: Original strand, 33471512 - 33471580
Alignment:
Q  555 aaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||||| | ||||| ||||||| |||||||||||||| || ||   ||||||||||||||||||||||    
T  33471512 aaattttattttttagattcattcaattaatgatgtatgtggttcatattatagaccacatacatcatt 33471580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 579 - 627
Target Start/End: Original strand, 39136612 - 39136660
Alignment:
Q  579 aattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    |||||||||||||||| || || |||||||||||||| |||||||||||    
T  39136612 aattaatgatgtatataatatttattatagaccacattcatcatttaat 39136660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 581 - 632
Target Start/End: Original strand, 18534916 - 18534967
Alignment:
Q  581 ttaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| ||||| || |||||||||||||||||||||| ||| ||||    
T  18534916 ttaatgatgtacatgatctttattatagaccacatacatcattaaatgaatg 18534967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 28949281 - 28949374
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatt---taattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||||||||| |||  | |||| |||||||   || ||||||||| ||||| | || |||||||||||||||||||||| ||| ||||    
T  28949281 actattataagtaaaagtttacagtttagattcattcattatttaatgatgcatatggtctttattatagaccacatacatcattaaatgaatg 28949374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 546 - 632
Target Start/End: Original strand, 7295069 - 7295155
Alignment:
Q  546 ttataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||| ||||||| ||| ||||||| ||||| | |||||||| ||| | || | || |||||| | ||||||||||||||||||||||    
T  7295069 ttatgagtaaaaatttatattttagattcactcaattaatgttgtttgtggtctttattatatatcacatacatcatttaataaatg 7295155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 544 - 631
Target Start/End: Original strand, 8282450 - 8282539
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatg--atgtatatgattttgattatagaccacatacatcatttaataaat 631  Q
    |||||||| ||||| |||| |||||  ||||||| ||||||||  || |||||||| || ||||||||||| ||| |||||||| |||||    
T  8282450 tattataaataaaaatttgcattttgaattcattcaattaatggtatatatatgatctttattatagaccatataaatcatttattaaat 8282539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 565 - 623
Target Start/End: Original strand, 11032335 - 11032393
Alignment:
Q  565 ttttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||||||||||| |||||||||||||| || ||   ||||| ||||||||||||||||    
T  11032335 ttttatattcattcaattaatgatgtatgtggttcatattatggaccacatacatcatt 11032393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 565 - 623
Target Start/End: Original strand, 24936713 - 24936771
Alignment:
Q  565 ttttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||| ||||||||| ||||||||||||||||  || |||||  |||||||||||||||    
T  24936713 ttttagattcatttatttaatgatgtatatgacattaattatgaaccacatacatcatt 24936771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 542 - 624
Target Start/End: Original strand, 25768628 - 25768710
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcattt 624  Q
    |||||||||||||||| ||   |||||||||||||| || ||||||| ||| |  | || ||||||||| |||||||||||||    
T  25768628 actattataagtaaaagttatcattttatattcattcaagtaatgatctatgtagtctttattatagactacatacatcattt 25768710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 565 - 623
Target Start/End: Original strand, 27942357 - 27942415
Alignment:
Q  565 ttttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||| ||||||| |||||||||||||||||||    |||||| |||||||||||||||    
T  27942357 ttttagattcattcaattaatgatgtatatgatccatattataaaccacatacatcatt 27942415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 632
Target Start/End: Complemental strand, 4089223 - 4089170
Alignment:
Q  579 aattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||||||||| | || |||||||| || |||||||||||||| ||||    
T  4089223 aattaatgatgtatatggtctttattatagaacatatacatcatttaatgaatg 4089170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 632
Target Start/End: Complemental strand, 16777994 - 16777933
Alignment:
Q  571 attcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||| | |||||||||| |  | || ||||||||| |||||||||||||||||||||    
T  16777994 attcatttattaaatgatgtatgtagtctttattatagactacatacatcatttaataaatg 16777933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 632
Target Start/End: Original strand, 21387614 - 21387675
Alignment:
Q  571 attcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||| |||||||||||||| |  | || |||||| ||||||||||||||||| ||||||    
T  21387614 attcattcaattaatgatgtatgtagtctttattatataccacatacatcatttattaaatg 21387675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 542 - 623
Target Start/End: Original strand, 27554506 - 27554587
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    |||| ||||| ||||| ||| | ||||| || |||| |||||||||||||| |||| || |||||| | |||||||||||||    
T  27554506 actaatataaataaaaatttattttttagatacattcaattaatgatgtatgtgatctttattatatatcacatacatcatt 27554587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 542 - 615
Target Start/End: Original strand, 29205321 - 29205394
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacat 615  Q
    ||||||||||| |||| |   |||||| |||||||| ||||||||||||||||||| || ||||| || |||||    
T  29205321 actattataagcaaaaatcaatattttttattcattaaattaatgatgtatatgatctttattatcgatcacat 29205394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 632
Target Start/End: Complemental strand, 5084539 - 5084471
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||| ||| |||||||||||||||| || || ||||||||  |||||||| || |||| ||||    
T  5084539 attttatattaattcaattaatgatgtatattatctttattatagaaaacatacatgatataatgaatg 5084471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 572 - 632
Target Start/End: Original strand, 23092393 - 23092453
Alignment:
Q  572 ttcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||||||| ||||||||| |||  ||||| |||| ||||||||||| | ||||||    
T  23092393 ttcatttaattaataatgtatatggtttatattatggaccgcatacatcattaattaaatg 23092453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 632
Target Start/End: Original strand, 28306346 - 28306414
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||||||| | ||||||||| | || ||||| ||||||||||| |||||||||| ||| ||||    
T  28306346 attttagattcattcatttaatgatgcacataatttttattatagaccatatacatcattaaatgaatg 28306414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 565 - 625
Target Start/End: Complemental strand, 31417625 - 31417565
Alignment:
Q  565 ttttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcattta 625  Q
    ||||| ||||||| ||| |||||||||| ||||||| ||| ||||| | ||||||||||||    
T  31417625 ttttagattcattcaataaatgatgtatgtgatttttattgtagacaatatacatcattta 31417565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 542 - 610
Target Start/End: Original strand, 31813420 - 31813488
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagac 610  Q
    ||||||||||  |||| |||  |||||| ||||||| ||||||||||||||||| | || |||||||||    
T  31813420 actattataaacaaaaatttacattttagattcattcaattaatgatgtatatggtcttcattatagac 31813488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 555 - 623
Target Start/End: Complemental strand, 32389273 - 32389205
Alignment:
Q  555 aaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||||||  ||||| ||||||| ||| |||||||||| |||||   |||||| |||||||||||||||    
T  32389273 aaattttgctttttaaattcattcaataaatgatgtatgtgattcatattataaaccacatacatcatt 32389205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 555 - 623
Target Start/End: Original strand, 39970179 - 39970247
Alignment:
Q  555 aaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||||||  |||||  |||||| ||| |||||||||| || |||  ||||||||||||||||||||||    
T  39970179 aaattttgacttttaggttcattcaatcaatgatgtatgtggtttatattatagaccacatacatcatt 39970247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 632
Target Start/End: Complemental strand, 40176033 - 40175965
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| |||||||||| |||| |||||||  || || |||||| | || |||||||||||||||||||    
T  40176033 attttaaattcatttaactaattatgtatacaatctttattataaatcaaatacatcatttaataaatg 40175965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 3e-22; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 2050099 - 2050189
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| ||| ||||||| ||| ||||| ||||||||||||||||| || |||||| ||||||||||||||||||||||||    
T  2050099 actattataagcaaaactttttattttagatttatttatttaatgatgtatatgatctttattataaaccacatacatcatttaataaatg 2050189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 23377951 - 23378041
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||| ||||||| |||| |||||| ||||||| ||||||||||||||||||| || ||| |||| ||||||||||||||||||||||    
T  23377951 actattattagtaaaactttgcattttagattcattcaattaatgatgtatatgatctttattgtagatcacatacatcatttaataaatg 23378041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 542 - 627
Target Start/End: Original strand, 41805283 - 41805368
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    ||||||||||| ||||||||| |||||| ||||||| ||||||||||||||||  | || ||||||||||| ||||||||||||||    
T  41805283 actattataagcaaaattttgcattttaaattcattcaattaatgatgtatatagtctttattatagaccatatacatcatttaat 41805368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 544 - 623
Target Start/End: Original strand, 10996257 - 10996336
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||||||| |||| ||| ||||||| ||||||| ||||||||||||||||| | || ||||||||||||||||||||||    
T  10996257 tattataagcaaaaatttatattttaaattcattgaattaatgatgtatatggtctttattatagaccacatacatcatt 10996336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 1961318 - 1961408
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| |||  |||||| |||  |||||||||||||||||||| | || |||||||||||||||||||||||||| ||||    
T  1961318 actattataagcaaaaatttacattttagatttgtttaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatg 1961408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 542 - 627
Target Start/End: Complemental strand, 7079501 - 7079416
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    ||||||||||| ||||   | ||||||| ||||||||||||||||||||||||| | || ||||||||||||||| ||||||||||    
T  7079501 actattataagcaaaaacatatattttagattcatttaattaatgatgtatatggtcttaattatagaccacatatatcatttaat 7079416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 544 - 632
Target Start/End: Complemental strand, 15859680 - 15859592
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||| |||| | | ||||||| ||||||| ||||||||||||||||||| || ||||||||| |||||||| ||||||| ||||    
T  15859680 tattataagcaaaaatctatattttagattcattcaattaatgatgtatatgatatttattatagacaacatacattatttaatgaatg 15859592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 555 - 623
Target Start/End: Original strand, 37396226 - 37396294
Alignment:
Q  555 aaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||  ||||||||||||||||||||||    
T  37396226 aaattttgacttttagattcattcaattaatgatgtatatgatttatattatagaccacatacatcatt 37396294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 565 - 632
Target Start/End: Original strand, 41823773 - 41823840
Alignment:
Q  565 ttttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||| |||||||||||||||||||||| ||||||  |||||||||||||||||||||| | ||||||    
T  41823773 ttttaaattcatttaattaatgatgtatttgatttatattatagaccacatacatcattaattaaatg 41823840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 542 - 627
Target Start/End: Complemental strand, 11342101 - 11342016
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    ||||||||||| |||| | | ||||||| |||||||||||||||||||||||||||||| |||| | | ||||| ||| |||||||    
T  11342101 actattataagcaaaaatctatattttagattcatttaattaatgatgtatatgatttttattaaaaatcacatgcattatttaat 11342016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 563 - 632
Target Start/End: Complemental strand, 19951555 - 19951486
Alignment:
Q  563 tattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||||||| ||||||||||||||||| | || |||||||| || |||||| ||||||||||||    
T  19951555 tattttatattcattcaattaatgatgtatatgctctttattatagatcatatacattatttaataaatg 19951486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 542 - 627
Target Start/End: Original strand, 37195061 - 37195146
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    |||| |||||| |||| ||  ||||||| ||||| | ||||||||||||||||| | || ||||||||||||||||||||||||||    
T  37195061 actaatataagcaaaagttaatattttagattcactcaattaatgatgtatatggtctttattatagaccacatacatcatttaat 37195146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 626
Target Start/End: Complemental strand, 38618526 - 38618442
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaa 626  Q
    ||||||||||| |||| |||  |||||| ||||||| ||||||  ||||||| ||| || |||||||||||||||||||||||||    
T  38618526 actattataaggaaaaatttacattttacattcattcaattaaaaatgtataagatctttattatagaccacatacatcatttaa 38618442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 564 - 627
Target Start/End: Complemental strand, 38465898 - 38465835
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    |||||| ||||||| ||||||||||||||||| | || ||||| ||||||||||||||||||||    
T  38465898 attttagattcattcaattaatgatgtatatggtctttattatggaccacatacatcatttaat 38465835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 31101958 - 31102048
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||  |||| |||||| |||||||   |||||||| |||||||| || |||||| ||||||||||||||||||| ||||    
T  31101958 actattataagcaaatgtttgcattttagattcattcggttaatgatatatatgatctttattataaaccacatacatcatttaatgaatg 31102048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 542 - 631
Target Start/End: Original strand, 32460750 - 32460840
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaatt-aatgatgtatatgattttgattatagaccacatacatcatttaataaat 631  Q
    ||||||||||| |||| |||  |||||| ||| |||| ||| |||||||||||| || || |||||||| |||||||||||||||||||||    
T  32460750 actattataagcaaaaatttacattttagattaattttatttaatgatgtatattatctttattatagaacacatacatcatttaataaat 32460840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 623
Target Start/End: Original strand, 10041563 - 10041632
Alignment:
Q  554 aaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||||||  |||||| |||||||||||||||||||||| || |||  | ||||||||||||||||||||    
T  10041563 aaaattttacattttagattcatttaattaatgatgtatgtggtttataatatagaccacatacatcatt 10041632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 571 - 627
Target Start/End: Complemental strand, 11093632 - 11093576
Alignment:
Q  571 attcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    ||||||||||||||| ||||||||  | || ||||||||||||||||||||||||||    
T  11093632 attcatttaattaattatgtatatagtctttattatagaccacatacatcatttaat 11093576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 564 - 632
Target Start/End: Complemental strand, 26003544 - 26003476
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||||||| ||||||||||||||||| | || |||||| || |||||||||||||||| ||||    
T  26003544 attttagattcattcaattaatgatgtatatggtctttattatatactacatacatcatttaatgaatg 26003476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 571 - 627
Target Start/End: Original strand, 32630444 - 32630500
Alignment:
Q  571 attcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    ||||||| ||||||||||||||||| | || ||||||||| ||||||||||||||||    
T  32630444 attcattcaattaatgatgtatatggtctttattatagactacatacatcatttaat 32630500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 572 - 631
Target Start/End: Complemental strand, 10602395 - 10602336
Alignment:
Q  572 ttcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaat 631  Q
    |||||| ||||||||||||||||| | || |||||||||||||||||| ||||| |||||    
T  10602395 ttcattcaattaatgatgtatatggtctttattatagaccacatacattatttactaaat 10602336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 534 - 625
Target Start/End: Original strand, 36547342 - 36547433
Alignment:
Q  534 ctctgataactattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcattta 625  Q
    ||||||| ||||||||||  |||| ||   |||||| ||||||||||| |||||||||| |||| || | |||||| |||||||||||||||    
T  36547342 ctctgattactattataaacaaaaattgacattttaaattcatttaataaatgatgtatgtgatctttaatatagatcacatacatcattta 36547433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 596036 - 596126
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||  |||| ||  ||||||| |||||| | ||||||||||||||| || || |||||||| || |||||| ||||||||||||    
T  596036 actattataaacaaaaattaatattttagattcatcttattaatgatgtatataatctttattatagatcatatacattatttaataaatg 596126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 15119908 - 15119818
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| | |  |||||| ||| ||| | ||||||||||||||  | || |||||||||||||||||||||||||| ||||    
T  15119908 actattataagcaaaaatctacattttagatttattcatttaatgatgtatattgtctttattatagaccacatacatcatttaatgaatg 15119818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 26234155 - 26234065
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| |||  |||||| ||||||| | ||||||||| | ||| | || |||||||||||||||||||||| ||| ||||    
T  26234155 actattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaatg 26234065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 546 - 632
Target Start/End: Complemental strand, 32143533 - 32143447
Alignment:
Q  546 ttataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||| |||| |||  |||||| ||||||| ||||||||| ||||||  | || || ||| ||||||||||||||||||||||||    
T  32143533 ttataagcaaaactttacattttaaattcattcaattaatgaagtatatagtctttatcataaaccacatacatcatttaataaatg 32143447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 563 - 617
Target Start/End: Complemental strand, 32218686 - 32218632
Alignment:
Q  563 tattttatattcatttaattaatgatgtatatgattttgattatagaccacatac 617  Q
    ||||||| ||||||| |||||||||||||||| ||||| ||||||||||| ||||    
T  32218686 tattttagattcattcaattaatgatgtatataatttttattatagaccatatac 32218632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 627
Target Start/End: Original strand, 40204449 - 40204537
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtat---atgattttgattatagaccacatacatcatttaat 627  Q
    ||||||||||| |||| | | |||| || ||||||| ||||||||||||||   ||||| || |||||||| |||||||||||||||||    
T  40204449 actattataagcaaaaatctatattatacattcattcaattaatgatgtatatgatgatctttattatagatcacatacatcatttaat 40204537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 42530501 - 42530591
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||||||||| |||  |||||| |||||||||||||||  |||||| | | || ||||||||| | ||||||| |||||| ||||    
T  42530501 actattataagtaaaaatttacattttagattcatttaattaatattgtatacggtctttattatagacaatatacatcgtttaatgaatg 42530591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 632
Target Start/End: Original strand, 800739 - 800792
Alignment:
Q  579 aattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||||||||||||||| |||||| |||| |||||||||||||| ||||    
T  800739 aattaacgatgtatatgatttttattataaaccatatacatcatttaatgaatg 800792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 554 - 623
Target Start/End: Original strand, 11153226 - 11153295
Alignment:
Q  554 aaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    |||||| || |||||| ||||||| |||||||||||||| ||   || ||||||||||||||||||||||    
T  11153226 aaaattatgcattttagattcattcaattaatgatgtatgtgggctttattatagaccacatacatcatt 11153295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 542 - 587
Target Start/End: Complemental strand, 12116403 - 12116358
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatga 587  Q
    ||||||||||| |||||||||||||||| ||||||||| |||||||    
T  12116403 actattataagcaaaattttgtattttagattcatttatttaatga 12116358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 555 - 619
Target Start/End: Complemental strand, 4637125 - 4637061
Alignment:
Q  555 aaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacat 619  Q
    ||||||||  ||||| ||||||| |||||||||||||| || |||  ||||||||||||||||||    
T  4637125 aaattttgacttttagattcattcaattaatgatgtatgtggtttatattatagaccacatacat 4637061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 564 - 632
Target Start/End: Original strand, 11726526 - 11726594
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||||||| ||| |||||||||||| || || ||||| || ||||||||||||||||| ||||    
T  11726526 attttagattcattcaatcaatgatgtatataatctttattatggatcacatacatcatttaatgaatg 11726594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 545 - 597
Target Start/End: Original strand, 31175093 - 31175145
Alignment:
Q  545 attataagtaaaattttgtattttatattcatttaattaatgatgtatatgat 597  Q
    |||||||||||| |||| ||||||| ||||||| |||||||||||||| ||||    
T  31175093 attataagtaaatttttatattttagattcattcaattaatgatgtatctgat 31175145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 564 - 624
Target Start/End: Original strand, 33555208 - 33555268
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcattt 624  Q
    |||||| ||||||| ||||||||||||||||| | || || ||||| ||||||||||||||    
T  33555208 attttaaattcattcaattaatgatgtatatgctctttatcatagatcacatacatcattt 33555268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 564 - 632
Target Start/End: Complemental strand, 38181869 - 38181801
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||||||| ||||||||||||||||  | || ||| |||| ||||||||||||||||| ||||    
T  38181869 attttacattcattcaattaatgatgtatatagtctttattgtagatcacatacatcatttaatgaatg 38181801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 549 - 616
Target Start/End: Complemental strand, 14393244 - 14393177
Alignment:
Q  549 taagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacata 616  Q
    ||||||||||||  | ||||| ||| ||||||||||||||||||||||||   | |||||||||||||    
T  14393244 taagtaaaatttatttttttagatttatttaattaatgatgtatatgattcatagtatagaccacata 14393177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 565 - 623
Target Start/End: Original strand, 2795342 - 2795400
Alignment:
Q  565 ttttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||| |||||||||||||||||||||| || ||   ||||| ||||||||||||||||    
T  2795342 ttttaaattcatttaattaatgatgtatgtggttcatattatggaccacatacatcatt 2795400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 8740528 - 8740618
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| | |  |||||| ||||||| | ||||||||| | ||| | || |||||||||||||||||||||| ||| ||||    
T  8740528 actattataagcaaaaatctacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaatg 8740618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 19612950 - 19613040
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||| |||||| |||| | | ||||||| ||||||| | ||||||||| | ||  |||| |||||||||||||||||||||| ||| ||||    
T  19612950 actaatataagcaaaaatctatattttagattcattcatttaatgatgcacatagtttttattatagaccacatacatcattaaatgaatg 19613040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 564 - 618
Target Start/End: Original strand, 34500100 - 34500154
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacataca 618  Q
    |||||| ||||||| ||| |||||||||| ||||||  |||||||||||||||||    
T  34500100 attttaaattcattcaatgaatgatgtatttgatttgtattatagaccacataca 34500154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 563 - 632
Target Start/End: Original strand, 8383215 - 8383284
Alignment:
Q  563 tattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||| ||||||| | ||||| ||||| ||| | || |||||||| ||||||||||||| ||||||||    
T  8383215 tattttagattcattcatttaataatgtacatggtctttattatagatcacatacatcattaaataaatg 8383284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 565 - 598
Target Start/End: Complemental strand, 9436528 - 9436495
Alignment:
Q  565 ttttatattcatttaattaatgatgtatatgatt 598  Q
    |||||||||||||||||||||||||||| |||||    
T  9436528 ttttatattcatttaattaatgatgtatgtgatt 9436495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 632
Target Start/End: Complemental strand, 15916827 - 15916774
Alignment:
Q  579 aattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||||||||||| ||  |||||||| |||||||| ||||||| ||||    
T  15916827 aattaatgatgtatatgatctttgttatagactacatacattatttaatgaatg 15916774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 542 - 631
Target Start/End: Complemental strand, 18479451 - 18479363
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaat 631  Q
    |||||||||||||||| ||  | |||||| |||||| |||||| ||| ||| |||| || ||||||||||||||| || |||||| ||||    
T  18479451 actattataagtaaaaattact-ttttatcttcattcaattaacgatatatgtgatctttattatagaccacatatattatttaacaaat 18479363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 563 - 632
Target Start/End: Original strand, 19950147 - 19950216
Alignment:
Q  563 tattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||  |||||||| ||||||||| | ||| | || |||||| ||||||||||||||| ||||||||    
T  19950147 tattttaggttcatttatttaatgatgcacatggtctttattatataccacatacatcattaaataaatg 19950216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 565 - 609
Target Start/End: Original strand, 5762533 - 5762577
Alignment:
Q  565 ttttatattcatttaattaatgatgtatatgattttgattataga 609  Q
    ||||| ||||||| ||||||||||||||||||| || ||||||||    
T  5762533 ttttaaattcattcaattaatgatgtatatgatctttattataga 5762577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 555 - 623
Target Start/End: Original strand, 10099574 - 10099642
Alignment:
Q  555 aaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    |||||||  ||||||  ||||||||||||||||||||| || |||  | ||||||||||||| ||||||    
T  10099574 aaattttacattttaggttcatttaattaatgatgtatgtggtttataatatagaccacatatatcatt 10099642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 632
Target Start/End: Complemental strand, 31024280 - 31024212
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||||||| | | ||||||||||||  | || ||||| |||||||||||||||||||| ||||    
T  31024280 attttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatg 31024212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 632
Target Start/End: Original strand, 37182847 - 37182915
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||||||| | | ||||||||||||    || |||||||||||||||||||||||||| ||||    
T  37182847 attttagattcattaattaaatgatgtatatagcctttattatagaccacatacatcatttaatgaatg 37182915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 572 - 632
Target Start/End: Complemental strand, 42263116 - 42263056
Alignment:
Q  572 ttcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||| ||||||||||||||||| |  |||||  ||||||||||||||| ||| ||||    
T  42263116 ttcatttatttaatgatgtatatgatctatattatgaaccacatacatcattaaatgaatg 42263056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 544 - 632
Target Start/End: Complemental strand, 43701483 - 43701395
Alignment:
Q  544 tattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||||||| | |  |||||| ||| ||| ||||||||||||||||| |||| ||| |||  || | |||||||||||| ||||    
T  43701483 tattataagtaaaaatcttcattttagatttattcaattaatgatgtatatggtttttattgtaggtcatacacatcatttaatgaatg 43701395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 632
Target Start/End: Original strand, 43732169 - 43732237
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||||||| ||||||||||| ||||| |  | || ||| ||||||||||||||||||| ||||    
T  43732169 attttagattcattcaattaatgatgaatatggtcattatcatataccacatacatcatttaatgaatg 43732237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 2e-17; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 554 - 632
Target Start/End: Original strand, 2827580 - 2827658
Alignment:
Q  554 aaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||  |||||| ||||||||| ||||||||||||||||  || |||||||||||||| ||||||||||||||||    
T  2827580 aaaattttacattttagattcatttatttaatgatgtatatgaactttattatagaccacatgcatcatttaataaatg 2827658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 625
Target Start/End: Complemental strand, 8449707 - 8449622
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgat--tatagaccacatacatcattta 625  Q
    ||||||||||| |||| ||  ||||||| ||||||| ||||||||||| ||||||| |||||  ||||||||||||||||||||||    
T  8449707 actattataagcaaaaattaatattttagattcattcaattaatgatgcatatgatcttgattatatagaccacatacatcattta 8449622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 625
Target Start/End: Complemental strand, 8458511 - 8458426
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgat--tatagaccacatacatcattta 625  Q
    ||||||||||| |||| ||  ||||||| ||||||| ||||||||||| ||||||| |||||  ||||||||||||||||||||||    
T  8458511 actattataagcaaaaattaatattttagattcattcaattaatgatgcatatgatcttgattatatagaccacatacatcattta 8458426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 13281543 - 13281633
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| | |  |||||| ||||||| ||||||||||||||||||| ||  |||||| |||||||||||||||||| ||||    
T  13281543 actattataagcaaaaatctagattttagattcattcaattaatgatgtatatgatctttcttatagtccacatacatcatttaatcaatg 13281633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 33689238 - 33689328
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| |   ||||||||||||||| ||||||| ||||||||  | || ||||||||| |||||||||||||||||||||    
T  33689238 actattataagcaaaaatcaatattttatattcattcaattaataatgtatatagtatttattatagactacatacatcatttaataaatg 33689328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 542 - 627
Target Start/End: Original strand, 13506843 - 13506928
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    ||||||||||| |||| |||  || ||| ||||||||||||||||||||||||||| || ||||||||| | || |||||||||||    
T  13506843 actattataagcaaaagtttacatcttaaattcatttaattaatgatgtatatgatctttattatagactagatgcatcatttaat 13506928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 632
Target Start/End: Complemental strand, 3199848 - 3199759
Alignment:
Q  543 ctattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||| ||||  ||  |||||||||||||| |||||||  |||||||||| || |||||| |||||||||| |||||||| ||||    
T  3199848 ctattataagcaaaaacttacattttatattcattcaattaatagtgtatatgatctttattataaaccacatacaacatttaatgaatg 3199759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 571 - 632
Target Start/End: Original strand, 31996537 - 31996598
Alignment:
Q  571 attcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||| ||||||| ||||||||| | || ||||||||| |||||||||||||||||||||    
T  31996537 attcattcaattaataatgtatatggtatttattatagactacatacatcatttaataaatg 31996598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 542 - 625
Target Start/End: Original strand, 6032975 - 6033058
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcattta 625  Q
    |||||||||||||||| ||  ||||||| ||||||||||| ||| |||||| || | || | ||||||| ||||||||||||||    
T  6032975 actattataagtaaaaattgatattttagattcatttaataaataatgtatgtggtctttaatatagactacatacatcattta 6033058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 565 - 632
Target Start/End: Complemental strand, 10258412 - 10258345
Alignment:
Q  565 ttttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||| ||||||| ||||||||||||||||| |  | |||||||||||  ||||||||||||||||||    
T  10258412 ttttagattcattcaattaatgatgtatatggtcattattatagaccatgtacatcatttaataaatg 10258345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 535 - 625
Target Start/End: Original strand, 28991449 - 28991540
Alignment:
Q  535 tctgataactattataagtaaaattttgt-attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcattta 625  Q
    |||||| ||||||||||||||||  |||| |||||| ||||||| ||| | |||||||| ||||||| | |||| || ||||||||||||||    
T  28991449 tctgatcactattataagtaaaaaattgtcattttagattcattcaataactgatgtatgtgatttttaatatatactacatacatcattta 28991540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 554 - 632
Target Start/End: Complemental strand, 5571640 - 5571562
Alignment:
Q  554 aaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||| ||| ||||||| ||| ||| ||| ||||||||||||||  || |||| |||||||||| |||||||||||||||    
T  5571640 aaaactttttattttagattaattcaatcaatgatgtatatgacctttattacagaccacatatatcatttaataaatg 5571562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 612
Target Start/End: Original strand, 11637179 - 11637249
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagacca 612  Q
    ||||||||||| ||||  ||  |||||| ||||||| ||||||||||||||||||| || |||||||||||    
T  11637179 actattataagcaaaacattacattttaaattcattcaattaatgatgtatatgatctttattatagacca 11637249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 31398357 - 31398267
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| |||  |||||| ||||||| | ||||||||| | ||| | || |||||||||||||||||||||| ||| ||||    
T  31398357 actattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaatg 31398267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 554 - 627
Target Start/End: Complemental strand, 17214314 - 17214241
Alignment:
Q  554 aaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    |||| ||| ||||||||||||||||||||||| |||||| || | || || ||||||||||||  |||||||||    
T  17214314 aaaaatttatattttatattcatttaattaattatgtatgtggtctttataatagaccacatatgtcatttaat 17214241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 542 - 619
Target Start/End: Complemental strand, 31158973 - 31158897
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacat 619  Q
    |||||||||||||||| | |  |||||| ||||||| |||||||||| || ||||| || ||||||||||||||||||    
T  31158973 actattataagtaaaaatctacattttagattcattaaattaatgatata-atgatctttattatagaccacatacat 31158897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 564 - 632
Target Start/End: Complemental strand, 8146058 - 8145990
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||||||| | ||||||||||| ||| | || |||||||||||||||||||||| ||| ||||    
T  8146058 attttagattcattcatttaatgatgtacatggtctttattatagaccacatacatcattaaatgaatg 8145990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 564 - 632
Target Start/End: Original strand, 15517121 - 15517189
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||||||| | | ||||||||||||  | || |||||||||||||||||||||||||| ||||    
T  15517121 attttagattcattcattaaatgatgtatatcgtctttattatagaccacatacatcatttaatgaatg 15517189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 626
Target Start/End: Complemental strand, 32254952 - 32254868
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaa 626  Q
    ||||||||||| |||| ||  ||||||| ||||||| | | |||||||||| || | || ||||||||| |||||||||||||||    
T  32254952 actattataagcaaaagttaatattttagattcattcattaaatgatgtatgtggtctttattatagactacatacatcatttaa 32254868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 572 - 623
Target Start/End: Original strand, 3212280 - 3212331
Alignment:
Q  572 ttcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    |||||| |||||||||||||| ||||||  ||||| ||||||||||||||||    
T  3212280 ttcattcaattaatgatgtatgtgatttatattatggaccacatacatcatt 3212331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 564 - 623
Target Start/End: Complemental strand, 12383698 - 12383639
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    |||||| ||| ||| ||||||||||||| ||||| || ||||||||| ||||||||||||    
T  12383698 attttagattaattcaattaatgatgtacatgatctttattatagactacatacatcatt 12383639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 575 - 621
Target Start/End: Original strand, 10644306 - 10644352
Alignment:
Q  575 atttaattaatgatgtatatgattttgattatagaccacatacatca 621  Q
    |||||||||||||||||| |||||   ||||||||||||||||||||    
T  10644306 atttaattaatgatgtatgtgattcatattatagaccacatacatca 10644352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 565 - 623
Target Start/End: Original strand, 21478585 - 21478643
Alignment:
Q  565 ttttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||| ||||||| |||||||||||||| || ||   ||||||||||||||||||||||    
T  21478585 ttttagattcattcaattaatgatgtatgtggttcatattatagaccacatacatcatt 21478643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 542 - 632
Target Start/End: Complemental strand, 28555078 - 28554988
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| | |  |||||| ||||||||| ||||||||| | ||| | || ||||||||||| |||||||||| ||| ||||    
T  28555078 actattataagcaaaaatctacattttagattcatttatttaatgatgcacatggtctttattatagaccatatacatcattaaatgaatg 28554988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 542 - 592
Target Start/End: Complemental strand, 29215574 - 29215524
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtat 592  Q
    ||||||||||| |||||||||||||||| ||||||||| | | ||||||||    
T  29215574 actattataagcaaaattttgtattttagattcatttattaagtgatgtat 29215524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 563 - 627
Target Start/End: Original strand, 6263380 - 6263445
Alignment:
Q  563 tattttatattcatttaattaa-tgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    ||||||| ||| ||| |||||| ||||||||||||| || |||||| |||||| ||||||||||||    
T  6263380 tattttagattaattcaattaaatgatgtatatgatctttattatataccacacacatcatttaat 6263445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 632
Target Start/End: Complemental strand, 12218547 - 12218486
Alignment:
Q  571 attcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||| ||||||||||||||| ||| || ||||||||  ||||| |||||||||| ||||    
T  12218547 attcattcaattaatgatgtataagatctttattatagattacatatatcatttaatgaatg 12218486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 539 - 632
Target Start/End: Complemental strand, 31714669 - 31714576
Alignment:
Q  539 ataactattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||| ||||||||| |||| | |  ||||||  |||||| ||||||||||||||||||| || |||||| | || ||||||| |||||| ||||    
T  31714669 ataagtattataagaaaaaatctacattttaggttcattcaattaatgatgtatatgatatttattatatatcatatacatcgtttaatgaatg 31714576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 566 - 630
Target Start/End: Original strand, 3102172 - 3102235
Alignment:
Q  566 tttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaa 630  Q
    |||| ||| |||||||||||||||||||| || || |||||| |||| |||||| ||||||||||    
T  3102172 tttagatttatttaattaatgatgtatat-atctttattatataccatatacattatttaataaa 3102235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 632
Target Start/End: Complemental strand, 14218306 - 14218238
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||| ||||||||||||||||||||| | || |||||| || | || ||| ||||||||||||    
T  14218306 attttaaatttatttaattaatgatgtatatggtctttattatatactatattcattatttaataaatg 14218238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 545 - 621
Target Start/End: Complemental strand, 15467700 - 15467625
Alignment:
Q  545 attataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatca 621  Q
    ||||||||||||||||  | ||| | ||||||| |||||||||||||| ||||||  | |||||| |||||||||||    
T  15467700 attataagtaaaatttatt-tttcagattcattcaattaatgatgtatgtgatttataatatagatcacatacatca 15467625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 26498639 - 26498683
Alignment:
Q  579 aattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||||||||||||||| ||   ||||||||||||||||||||||    
T  26498639 aattaatgatgtatatggttcatattatagaccacatacatcatt 26498683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 632
Target Start/End: Complemental strand, 29072177 - 29072109
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||||||  ||| |||||||||| |||| || || ||||  ||||||||||||||||||||||    
T  29072177 attttaaattcatacaataaatgatgtatgtgatatttatgataggtcacatacatcatttaataaatg 29072109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 632
Target Start/End: Complemental strand, 29104750 - 29104682
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||||||  ||| |||||||||| |||| || || ||||  ||||||||||||||||||||||    
T  29104750 attttaaattcatacaataaatgatgtatgtgatatttatgataggtcacatacatcatttaataaatg 29104682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 565 - 625
Target Start/End: Original strand, 33053797 - 33053857
Alignment:
Q  565 ttttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcattta 625  Q
    ||||| ||||||| ||| |||||||||| |||| || ||| ||||| ||||||||||||||    
T  33053797 ttttagattcattcaataaatgatgtatgtgatctttattgtagacaacatacatcattta 33053857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 632
Target Start/End: Original strand, 34379766 - 34379834
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| ||||||| | | ||||||||||||  | || ||||| |||||||||||||||||||| ||||    
T  34379766 attttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatg 34379834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 46; Significance: 7e-17; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 543 - 632
Target Start/End: Complemental strand, 146098 - 146009
Alignment:
Q  543 ctattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||||  |||| |||| |||||| ||||||| ||||||||||||||||| | || ||| |||||||||||||||||||||| ||||    
T  146098 ctattataaacaaaaatttgcattttagattcattcaattaatgatgtatatggtctttattttagaccacatacatcatttaatgaatg 146009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 554 - 627
Target Start/End: Original strand, 216294 - 216367
Alignment:
Q  554 aaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    |||| ||| ||||||| ||||||||||||||||||| ||||||| || |||||| || ||||||||||||||||    
T  216294 aaaaatttatattttaaattcatttaattaatgatgcatatgatctttattataaacgacatacatcatttaat 216367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 542 - 623
Target Start/End: Complemental strand, 7788 - 7707
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||||||||| |||| | |  |||||| ||||||| | ||||||||| | ||| | || ||||||||||||||||||||||    
T  7788 actattataagcaaaaatctacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcatt 7707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 564 - 627
Target Start/End: Complemental strand, 89707 - 89644
Alignment:
Q  564 attttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    |||||| ||| ||| ||||||||||||||||||| || |||||||| |||||||||||||||||    
T  89707 attttaaatttattcaattaatgatgtatatgatctttattatagatcacatacatcatttaat 89644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 24615 - 24705
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||| |||||| ||||  || ||||||| ||||||| ||||||| | |||||| || || |||||||||||||||||||||||||| ||||    
T  24615 actaatataagcaaaacattatattttagattcattcaattaataacgtatattatctttattatagaccacatacatcatttaatgaatg 24705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 623
Target Start/End: Complemental strand, 5507 - 5438
Alignment:
Q  554 aaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||||||  |||||| |||||||||||||||||||||| || |||  | ||||||||||||||||||||    
T  5507 aaaattttacattttagattcatttaattaatgatgtatgtggtttataatatagaccacatacatcatt 5438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 2429 - 2519
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| |||  || ||| ||||||| | ||||||||| | ||||| || |||||||||||||||||| ||| ||||||||    
T  2429 actattataagcaaaaatttacatcttagattcattcatttaatgatgcacatgatctttattatagaccacatacattattaaataaatg 2519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 10084 - 10174
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| |||  || ||| ||||||| | ||||||||| | ||||| || |||||||||||||||||| ||| ||||||||    
T  10084 actattataagcaaaaatttacatcttagattcattcatttaatgatgcacatgatctttattatagaccacatacattattaaataaatg 10174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 542 - 632
Target Start/End: Original strand, 139305 - 139395
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    ||||||||||| |||| | | | ||||| ||||||| | ||||||||| | ||||| || |||||||||||||||||||||| ||| ||||    
T  139305 actattataagcaaaaatctattttttacattcattcatttaatgatgcacatgatctttattatagaccacatacatcattaaatgaatg 139395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0470 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 535 - 632
Target Start/End: Complemental strand, 4109 - 4012
Alignment:
Q  535 tctgataactattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||| |||||||||||||||| | | |||||| |||| ||| ||||||| || |||||  | || ||||||||||||||| || ||||| ||||||    
T  4109 tctgatcactattataagtaaaaatctatattttctatttattcaattaattatatatattgtctttattatagaccacatatataatttagtaaatg 4012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0756 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0756
Description:

Target: scaffold0756; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 555 - 623
Target Start/End: Original strand, 3540 - 3608
Alignment:
Q  555 aaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||||||  ||||| ||||||| ||| |||||||||| || |||  ||||||||||||||||||||||    
T  3540 aaattttgacttttagattcattcaatcaatgatgtatgtggtttatattatagaccacatacatcatt 3608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 555 - 623
Target Start/End: Complemental strand, 3532 - 3464
Alignment:
Q  555 aaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatt 623  Q
    ||||||||  ||||| ||||||| ||| |||||||||| || |||  ||||||||||||||||||||||    
T  3532 aaattttgacttttagattcattcaatcaatgatgtatgtggtttatattatagaccacatacatcatt 3464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 579 - 627
Target Start/End: Complemental strand, 40547 - 40499
Alignment:
Q  579 aattaatgatgtatatgattttgattatagaccacatacatcatttaat 627  Q
    |||||||| |||||||||| || |||||||||| |||||||||||||||    
T  40547 aattaatgttgtatatgatctttattatagaccgcatacatcatttaat 40499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 631
Target Start/End: Complemental strand, 88990 - 88898
Alignment:
Q  537 tgataactattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaat 631  Q
    |||| ||||||||||  |||| | | ||||||||||||||| |||||||||||  |||| | || || ||||| || ||||||||||||||||||    
T  88990 tgattactattataaacaaaaatctatattttatattcattcaattaatgatg--tatgttctttatcatagatcatatacatcatttaataaat 88898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1640 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1640
Description:

Target: scaffold1640; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 542 - 624
Target Start/End: Complemental strand, 1268 - 1186
Alignment:
Q  542 actattataagtaaaattttgtattttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcattt 624  Q
    |||||||||||||||| ||   |||||||||||||| || ||||||| ||| |  | || ||||||||| |||||||||||||    
T  1268 actattataagtaaaagttatcattttatattcattcaagtaatgatctatgtagtctttattatagactacatacatcattt 1186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1476 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1476
Description:

Target: scaffold1476; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 566 - 632
Target Start/End: Original strand, 693 - 758
Alignment:
Q  566 tttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||| ||| ||| |||||||||||||||||||||| |||||||| | | ||||||||||||| ||||    
T  693 tttagatttattcaattaatgatgtatatgatttt-attatagatcgcgtacatcatttaatgaatg 758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 565 - 625
Target Start/End: Original strand, 162 - 222
Alignment:
Q  565 ttttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcattta 625  Q
    ||||| ||||||||||| ||| |||||| || ||   ||||||||||||||||||||||||    
T  162 ttttagattcatttaataaattatgtatgtggttcatattatagaccacatacatcattta 222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 565 - 625
Target Start/End: Complemental strand, 19901 - 19841
Alignment:
Q  565 ttttatattcatttaattaatgatgtatatgattttgattatagaccacatacatcattta 625  Q
    ||||| ||||||||||| ||| |||||| || ||   ||||||||||||||||||||||||    
T  19901 ttttagattcatttaataaattatgtatgtggttcatattatagaccacatacatcattta 19841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 572 - 632
Target Start/End: Complemental strand, 491951 - 491891
Alignment:
Q  572 ttcatttaattaatgatgtatatgattttgattatagaccacatacatcatttaataaatg 632  Q
    |||||||| ||||||||||||||||| |  |||||  ||||||||||||||| ||| ||||    
T  491951 ttcatttatttaatgatgtatatgatctatattatgaaccacatacatcattaaatgaatg 491891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University