View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15182_low_99 (Length: 237)
Name: NF15182_low_99
Description: NF15182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15182_low_99 |
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Alignment Details
Target: chr1 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 34367677 - 34367452
Alignment:
| Q |
1 |
caaacccatcttcaccatagcttgttgaaaatctaggaagaacatggcttggttcattgcataagcattcacaatgttccttgttctagggctagagtag |
100 |
Q |
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| T |
34367677 |
caaacccatcttcaccatagcttgttgaaaatctaggaagaacatggcttggttcattgcataagcattcacaatgttccttgttctagggctagagtag |
34367578 |
T |
|
| Q |
101 |
agtgtttgatctgaaaacaaaacaccatttttcctcaacaaagcattgaagtaaacattgtcaaaatcgttccttgttgcatcgaatggttgttctgcat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34367577 |
agtgtttgatctgaaaacaaaacaccatttttcctcaacaaagcgttgaagtaaacattgtcaaaatcgttccttgttgcatcgaatggttgttctgcat |
34367478 |
T |
|
| Q |
201 |
tgtcaccagaagtacatgttcttgat |
226 |
Q |
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|||||||||||||||||||||||||| |
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| T |
34367477 |
tgtcaccagaagtacatgttcttgat |
34367452 |
T |
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