View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15184_high_6 (Length: 299)
Name: NF15184_high_6
Description: NF15184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15184_high_6 |
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Alignment Details
Target: chr3 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 17 - 283
Target Start/End: Complemental strand, 7036098 - 7035832
Alignment:
| Q |
17 |
catacctcaatcatgcattaacttgtagttgtactagacataatgtataggaaatagaaataataatgaatttaaaatactgtaaaatttcttacaaaat |
116 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7036098 |
catacctcaatcatgcattaacttgtaggtgtactagacataatgtataggaaatagaaataataatgaatttaaaatactgtaaaatttcttacaaaat |
7035999 |
T |
|
| Q |
117 |
actaagcttgcttgattataatatataggttgtgttaatactttctcccaattaatattacatgaaatagataaaaagataaatcccacaagtaaacaca |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7035998 |
actaagcttgcttgattataatatataggttgtgttaatactttctcccaattaatattacatgaaatagataaaaagataaatcccacaagtaaacaca |
7035899 |
T |
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| Q |
217 |
actcaataataagcatcaaggtttccttatcattcgcttcatccatgttttcgtccttttctcccta |
283 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7035898 |
acccaataataagcatcaaggtttccttatcattcgcttcatccatgttttcgtccttttctcccta |
7035832 |
T |
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