View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15185_high_5 (Length: 346)
Name: NF15185_high_5
Description: NF15185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15185_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 8 - 305
Target Start/End: Complemental strand, 10688928 - 10688629
Alignment:
| Q |
8 |
aagaaaatgaaaaacaggtgatgttttttctacaaaaatgtaagagctagcctccaataccaatatgcgtgaaacttgttcgataccaatattatttgca |
107 |
Q |
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| T |
10688928 |
aagaaaatgaaaaacaggtgatgttttttcttcaaaaatgtaagagctagtctcctataccaatatgcgtgaaacttgttcgatatcaatattatttgca |
10688829 |
T |
|
| Q |
108 |
tatttgagtttc-tttttatgatagaatcttgtttttt-attgacttaccttaatttctgtaaaccgttgtatttgttacacttggtattgtatccgtac |
205 |
Q |
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|||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
10688828 |
tatttgagtttcctttttatgaaagaatcttgtttttttattgacttaccttaatttctttaaaccgttgtatttgttacacttggtattgtatccgtac |
10688729 |
T |
|
| Q |
206 |
ctatgcatcctaaggtaagagcatgtcgtccacatttgaataattaacttgctagatttgagtgcgaccggtgtcgttgttgaacttttggagacagccc |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
10688728 |
ctatgcatcctaaggtaagagcatgtcgtccacatttgaataattaacttgcgagatttgagtgcgaccggcgtcgttgttgaacttttggagacagccc |
10688629 |
T |
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