View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15187_low_5 (Length: 305)
Name: NF15187_low_5
Description: NF15187
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15187_low_5 |
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Alignment Details
Target: chr1 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 11 - 290
Target Start/End: Complemental strand, 12569574 - 12569295
Alignment:
| Q |
11 |
cataggaaggaataatttatctactatgtgttcaagtgtgcatgattttagtgtctcaacaatcatcaagtatagctagctaaacacagtattattagaa |
110 |
Q |
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| T |
12569574 |
cataggaaggaataatttatctactatgtgttcaagtgtgcatgattttagtgtctcaacaatcatcaagtataactagctaaacacagtattattagaa |
12569475 |
T |
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| Q |
111 |
gaatcaaggaatccaaactatcagaagcacactaaacctttagagtatgaacacatggtaaaagacgaccaaactcaagtcaagttaaattaaagatatg |
210 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
12569474 |
gaatcaaggaatccaaactatcagaagcacactgaacctttagagtatgaacacatggtaaaagacgaccaagctcaagtcaagttaaattaaagatatg |
12569375 |
T |
|
| Q |
211 |
caactaatcatctagtcaacacaaattcaacaatcagctaaacacattgtctgtgcataagtaatcctctgtatgataag |
290 |
Q |
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|||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12569374 |
caactaattatctagtcaacacaaagtcaacaatcagctaaacacattgtctgtgcataagtaatcctctgtatgataag |
12569295 |
T |
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