View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15187_low_6 (Length: 230)
Name: NF15187_low_6
Description: NF15187
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15187_low_6 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 1920012 - 1920103
Alignment:
| Q |
18 |
ttcatatgattaagaaaacaaataa-caaacatcattcatttgattcagaatttccaaaaagtggtaaattcaattctagtacttttctttt |
108 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1920012 |
ttcatatgattaagaaaataaataaacaaacatcattcatttgattcagaatttccaaaaagtggtaaattcaattctagtacttttctttt |
1920103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University