View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15188_low_14 (Length: 272)

Name: NF15188_low_14
Description: NF15188
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15188_low_14
NF15188_low_14
[»] chr6 (11 HSPs)
chr6 (12-272)||(17142900-17143159)
chr6 (77-116)||(26385602-26385641)
chr6 (31-116)||(9481193-9481278)
chr6 (19-116)||(32017774-32017870)
chr6 (52-104)||(3230165-3230217)
chr6 (60-116)||(24731946-24732002)
chr6 (77-116)||(10321744-10321783)
chr6 (19-128)||(9854157-9854263)
chr6 (19-116)||(24732208-24732304)
chr6 (79-116)||(33714494-33714531)
chr6 (61-113)||(30618274-30618326)
[»] chr5 (18 HSPs)
chr5 (19-128)||(22571077-22571185)
chr5 (19-116)||(7126187-7126284)
chr5 (19-116)||(24074314-24074411)
chr5 (19-116)||(24837180-24837277)
chr5 (19-135)||(23979171-23979286)
chr5 (20-128)||(20946933-20947041)
chr5 (19-116)||(6817134-6817230)
chr5 (19-116)||(14143913-14144009)
chr5 (67-116)||(27159272-27159321)
chr5 (31-116)||(29444817-29444902)
chr5 (77-116)||(7125929-7125968)
chr5 (77-116)||(14411708-14411747)
chr5 (77-116)||(18336478-18336517)
chr5 (67-114)||(41001670-41001717)
chr5 (19-116)||(14144171-14144268)
chr5 (19-116)||(29445076-29445172)
chr5 (19-103)||(6817391-6817475)
chr5 (52-116)||(24837472-24837536)
[»] chr7 (20 HSPs)
chr7 (15-116)||(25772375-25772475)
chr7 (30-133)||(23274920-23275021)
chr7 (58-116)||(12006552-12006610)
chr7 (19-116)||(31851252-31851347)
chr7 (19-116)||(1250476-1250573)
chr7 (19-116)||(38879734-38879832)
chr7 (19-114)||(6465868-6465962)
chr7 (77-116)||(10409701-10409740)
chr7 (77-116)||(12006868-12006907)
chr7 (77-116)||(24195200-24195239)
chr7 (77-116)||(28218189-28218228)
chr7 (77-116)||(28218491-28218530)
chr7 (31-137)||(20419527-20419632)
chr7 (79-116)||(23704673-23704710)
chr7 (19-116)||(23704931-23705027)
chr7 (60-116)||(7658276-7658332)
chr7 (62-114)||(14795563-14795615)
chr7 (62-114)||(15242555-15242607)
chr7 (60-116)||(31852141-31852197)
chr7 (60-116)||(48672288-48672344)
[»] chr4 (26 HSPs)
chr4 (19-116)||(9516621-9516718)
chr4 (20-116)||(31944221-31944317)
chr4 (77-116)||(3273632-3273671)
chr4 (19-116)||(41947126-41947221)
chr4 (19-116)||(9396710-9396807)
chr4 (19-116)||(26252507-26252604)
chr4 (19-116)||(37012718-37012815)
chr4 (77-114)||(46046443-46046480)
chr4 (52-116)||(9516913-9516977)
chr4 (77-133)||(15640711-15640766)
chr4 (60-116)||(31090372-31090428)
chr4 (77-116)||(3018022-3018061)
chr4 (13-116)||(9619243-9619346)
chr4 (77-116)||(31218309-31218348)
chr4 (77-116)||(31943960-31943999)
chr4 (77-135)||(9397026-9397083)
chr4 (19-116)||(15640985-15641083)
chr4 (77-114)||(9618993-9619030)
chr4 (77-114)||(13132267-13132304)
chr4 (79-116)||(38573980-38574017)
chr4 (20-109)||(43312227-43312316)
chr4 (77-114)||(46046752-46046789)
chr4 (79-116)||(48259834-48259871)
chr4 (79-116)||(48580196-48580233)
chr4 (60-116)||(18667601-18667657)
chr4 (19-130)||(31090058-31090169)
[»] chr2 (24 HSPs)
chr2 (19-128)||(33290049-33290157)
chr2 (19-134)||(23854682-23854796)
chr2 (77-116)||(26560883-26560922)
chr2 (19-116)||(30390470-30390567)
chr2 (77-133)||(17850582-17850637)
chr2 (52-116)||(26135828-26135892)
chr2 (61-116)||(13254748-13254803)
chr2 (21-116)||(19251742-19251836)
chr2 (20-115)||(30959943-30960037)
chr2 (62-130)||(13284726-13284793)
chr2 (51-115)||(21481013-21481077)
chr2 (60-116)||(22263504-22263560)
chr2 (77-116)||(26236138-26236177)
chr2 (19-114)||(39878115-39878210)
chr2 (60-131)||(42670714-42670784)
chr2 (58-116)||(17463103-17463161)
chr2 (19-116)||(26136087-26136184)
chr2 (19-116)||(17463361-17463458)
chr2 (19-116)||(19251482-19251578)
chr2 (19-116)||(23806222-23806319)
chr2 (77-133)||(15106393-15106448)
chr2 (80-116)||(23046718-23046754)
chr2 (80-116)||(23855025-23855061)
chr2 (77-133)||(26560551-26560606)
[»] chr1 (20 HSPs)
chr1 (19-128)||(16294217-16294325)
chr1 (19-116)||(48072231-48072328)
chr1 (19-116)||(52058022-52058119)
chr1 (60-116)||(17606315-17606371)
chr1 (19-116)||(33628960-33629057)
chr1 (19-116)||(39711085-39711180)
chr1 (19-116)||(39711342-39711439)
chr1 (77-133)||(17502057-17502112)
chr1 (20-116)||(29696576-29696671)
chr1 (77-116)||(17606634-17606673)
chr1 (77-116)||(18462297-18462336)
chr1 (77-116)||(24467640-24467679)
chr1 (60-115)||(42510326-42510381)
chr1 (52-114)||(17500782-17500844)
chr1 (52-134)||(34749408-34749489)
chr1 (19-116)||(8292815-8292912)
chr1 (19-116)||(30299243-30299339)
chr1 (19-116)||(39826061-39826158)
chr1 (12-133)||(39826309-39826429)
chr1 (60-116)||(43539658-43539714)
[»] chr8 (20 HSPs)
chr8 (19-118)||(30789517-30789615)
chr8 (51-103)||(22848548-22848600)
chr8 (19-116)||(5555139-5555236)
chr8 (19-116)||(10108381-10108478)
chr8 (77-116)||(7689851-7689890)
chr8 (77-116)||(42112996-42113035)
chr8 (61-116)||(42605766-42605821)
chr8 (19-116)||(10108640-10108737)
chr8 (19-116)||(14820306-14820402)
chr8 (19-116)||(14820564-14820661)
chr8 (20-109)||(21144776-21144865)
chr8 (52-104)||(2583343-2583395)
chr8 (20-116)||(21148207-21148303)
chr8 (77-116)||(5554880-5554919)
chr8 (77-116)||(18044155-18044194)
chr8 (61-116)||(43481627-43481682)
chr8 (77-116)||(43851676-43851715)
chr8 (77-115)||(10171471-10171509)
chr8 (35-116)||(26136696-26136777)
chr8 (88-116)||(17622901-17622929)
[»] scaffold0361 (1 HSPs)
scaffold0361 (77-116)||(4573-4612)
[»] chr3 (21 HSPs)
chr3 (77-116)||(9267302-9267341)
chr3 (19-116)||(9266986-9267083)
chr3 (19-116)||(14262047-14262144)
chr3 (19-116)||(16722002-16722099)
chr3 (19-116)||(52552958-52553055)
chr3 (20-116)||(14262307-14262403)
chr3 (19-130)||(5800875-5800984)
chr3 (77-116)||(35996003-35996042)
chr3 (77-135)||(35740810-35740867)
chr3 (52-133)||(1067709-1067789)
chr3 (19-116)||(14161882-14161979)
chr3 (31-116)||(19720344-19720429)
chr3 (19-116)||(30500311-30500407)
chr3 (79-115)||(14171599-14171635)
chr3 (77-132)||(14162198-14162252)
chr3 (77-116)||(14171914-14171953)
chr3 (57-116)||(17465675-17465734)
chr3 (77-116)||(19112775-19112814)
chr3 (19-116)||(49986798-49986895)
chr3 (67-116)||(17465378-17465427)
chr3 (52-116)||(45969926-45969990)
[»] scaffold0176 (1 HSPs)
scaffold0176 (60-116)||(15939-15995)
[»] scaffold0185 (1 HSPs)
scaffold0185 (51-116)||(3880-3945)
[»] scaffold0449 (2 HSPs)
scaffold0449 (21-116)||(7237-7332)
scaffold0449 (77-114)||(7528-7565)
[»] scaffold0220 (1 HSPs)
scaffold0220 (77-128)||(26479-26529)
[»] scaffold0117 (1 HSPs)
scaffold0117 (77-116)||(12310-12349)
[»] scaffold0352 (1 HSPs)
scaffold0352 (19-116)||(5948-6046)


Alignment Details
Target: chr6 (Bit Score: 150; Significance: 2e-79; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 12 - 272
Target Start/End: Original strand, 17142900 - 17143159
Alignment:
Q  12 aaaggaacaaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacga 111  Q
    |||||| |||||||||||||||||||||||| || |||||||||||| |||||||||||||    ||||||| || ||||||||||||||| ||| || |    
T  17142900 aaaggaccaaaagtggagaaatatgaaattattaggacctaatcaaatttttttattttactggaactaaaaccgaaattcgctaatattagaagaacca 17142999  T
Q  112 aaagacagtattaacccaaaaatattatagtggtaatgcaaatttgttatttccttccactagattcctttttatcccattgcttttaaactaag-aata 210  Q
      | |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |    
T  17143000 cga-acagtattaacccaaaaatattacggtggtaatgcaaatttgttatttccttccactacattcctttttatcccattgcttttaaactaagtaaga 17143098  T
Q  211 acatacatataactaaaatccttctactctcatttcatcctctacattgaactaactacact 272  Q
    | | ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  17143099 ata-acatataactaaaatccttctactctcatttcatcctcagcattgaactaactacact 17143159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 116
Target Start/End: Original strand, 26385602 - 26385641
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  26385602 actaaaatcggaattcgctaatattacagggacgaaaaga 26385641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 9481278 - 9481193
Alignment:
Q  31 aatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||||||||||   ||| ||||| ||||  ||| |||||||   ||||||| |||||||||||||||||||| |||||||||||    
T  9481278 aatatgaaattacagggacataatctaaatccttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaaga 9481193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 32017774 - 32017870
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  |||||||||||||   |||  |||| |||| |||| |||||||   ||||||| |||||||||||||||||||| |||||||||||    
T  32017774 caaaagtggaagaatatgaaattacagggacaaaatctaaatctttt-ttttacagggactaaaaccggaattcgctaatattacagggacgaaaaga 32017870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 3230165 - 3230217
Alignment:
Q  52 aatcaaaattttttattttacaaatactaaaatcggaattcgctaatattaca 104  Q
    |||| |||| ||||||||||||   ||||||||||||||||||||||||||||    
T  3230165 aatctaaatcttttattttacagggactaaaatcggaattcgctaatattaca 3230217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 24732002 - 24731946
Alignment:
Q  60 ttttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||| |||||||   ||||||| |||||||||||||||||||| |||||||||||    
T  24732002 tttttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaaga 24731946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 116
Target Start/End: Complemental strand, 10321783 - 10321744
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  10321783 actaaaaccggaattcgctaatattacagggacgaaaaga 10321744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 9854157 - 9854263
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaagaca 118  Q
    ||||||||||  ||||||||||||| | |||  |||| ||||| ||  ||||||| |  |||||| | |||||||||||||||||| |||| ||||| ||    
T  9854157 caaaagtggaagaatatgaaattacaaggacaaaatctaaattattatttttacaga--ctaaaaccagaattcgctaatattacagggacaaaaag-ca 9854253  T
Q  119 gtattaaccc 128  Q
    ||||||||||    
T  9854254 gtattaaccc 9854263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 24732208 - 24732304
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  |||||||||||||   |||  |||| |||| |||| |||||||   |||||| | ||||||||||||||||||| |||||||||||    
T  24732208 caaaagtggaagaatatgaaattacatggacaaaatctaaatctttttttttacagggactaaatt-ggaattcgctaatattacagggacgaaaaga 24732304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 33714531 - 33714494
Alignment:
Q  79 taaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  33714531 taaaaccggaattcgctaatattacagggacgaaaaga 33714494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 30618274 - 30618326
Alignment:
Q  61 tttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaa 113  Q
    ||||| ||||||||  |||||||||| ||||||||||||||| | ||||||||    
T  30618274 ttttttttttacaagaactaaaatcgaaattcgctaatattagagggacgaaa 30618326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 22571185 - 22571077
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaagaca 118  Q
    ||||||||||  |||||||||||||  |||  ||||| ||||||||| |||||||   ||||||||||||||||||||||||||||||||| ||||  ||    
T  22571185 caaaagtggaagaatatgaaattacagagatataatctaaatttttttttttacagggactaaaatcggaattcgctaatattacaaggac-aaaaatca 22571087  T
Q  119 gtattaaccc 128  Q
    ||||||||||    
T  22571086 gtattaaccc 22571077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 7126187 - 7126284
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  |||||||||||||   |||  |||| |||| |||| ||||||||| ||||||| |||||||||||||||||||| ||| |||||||    
T  7126187 caaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacaaagactaaaaccggaattcgctaatattacagggatgaaaaga 7126284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 24074411 - 24074314
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  |||||||||||||  ||||  |||| |||| |||| |||||||   ||||||| || ||||||||||||||||| |||||||||||    
T  24074411 caaaagtggaagaatatgaaattacagagacaaaatctaaatatttttttttacagggactaaaaccgaaattcgctaatattacatggacgaaaaga 24074314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 24837277 - 24837180
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  ||||||||||||| | |||  |||| |||| |||| |||||||   ||||||| |||||||||||| ||||||| |||||||||||    
T  24837277 caaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctattattacagggacgaaaaga 24837180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 23979171 - 23979286
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaagaca 118  Q
    ||||||||||  ||| |||||||||   |||  |||| |||| |||| |||||||   ||||||| |||||||||||||||||||| |||||||||||      
T  23979171 caaaagtggaagaatttgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaaga-g 23979269  T
Q  119 gtattaacccaaaaata 135  Q
    ||||| |||||||||||    
T  23979270 gtatttacccaaaaata 23979286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 20947041 - 20946933
Alignment:
Q  20 aaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgct--aatattacaaggacgaaaagac 117  Q
    |||| ||||| ||| |||||||||  ||||||||| ||||||  || |||||||| ||||||||||||||||||||   ||||||||||||| |||| |     
T  20947041 aaaaatggaggaatctgaaattacagagacctaattaaaattactt-ttttacaagtactaaaatcggaattcgcttatatattacaaggaccaaaa-at 20946944  T
Q  118 agtattaaccc 128  Q
    |||||||||||    
T  20946943 agtattaaccc 20946933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 6817230 - 6817134
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  ||| |||||||||   ||| ||||| |||| |||| |||||||   ||||||| |||||||| |||||||||||||||||||||||    
T  6817230 caaaagtggaagaatctgaaattacatggacataatctaaatctttt-ttttacagggactaaaaccggaattcactaatattacaaggacgaaaaga 6817134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 14144009 - 14143913
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  |||||||||||||   |||  |||| |||| |||| |||||||   ||||||| |||||||||||||||||||| |||||||||||    
T  14144009 caaaagtggaagaatatgaaattacagggacaaaatctaaatctttt-ttttacagggactaaaaccggaattcgctaatattacagggacgaaaaga 14143913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 27159272 - 27159321
Alignment:
Q  67 ttttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||  ||||||| || |||||||||||||||||||||||||||||    
T  27159272 ttttacaaggactaaaaccgaaattcgctaatattacaaggacgaaaaga 27159321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 29444902 - 29444817
Alignment:
Q  31 aatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||||| | ||| ||||| ||||  ||| |||||||   ||||||||| ||||||| |||||||||| |||||||||||    
T  29444902 aatatgaaattacaaggacataatctaaatccttttttttacagggactaaaatcagaattcgttaatattacagggacgaaaaga 29444817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 116
Target Start/End: Complemental strand, 7125968 - 7125929
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||||||||||||||||||||||||| | |||||||||    
T  7125968 actaaaatcggaattcgctaatattacaggaacgaaaaga 7125929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 116
Target Start/End: Complemental strand, 14411747 - 14411708
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  14411747 actaaaaccggaattcgctaatattacagggacgaaaaga 14411708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 116
Target Start/End: Complemental strand, 18336517 - 18336478
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||||||||||||||||||||||| | |||||||||||    
T  18336517 actaaaatcggaattcgctaatattatagggacgaaaaga 18336478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 114
Target Start/End: Original strand, 41001670 - 41001717
Alignment:
Q  67 ttttacaaatactaaaatcggaattcgctaatattacaaggacgaaaa 114  Q
    ||||||||  ||||||| |||||||||||||||||||| |||||||||    
T  41001670 ttttacaaggactaaaaccggaattcgctaatattacagggacgaaaa 41001717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 14144171 - 14144268
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  ||| |||||||||   |||  |||| |||| |||| |||||||   ||||||||||||||||| ||||||||||  ||||||||||    
T  14144171 caaaagtggaagaatttgaaattacagggacaaaatctaaatctttttttttacagggactaaaatcggaattcgttaatattacagtgacgaaaaga 14144268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 29445076 - 29445172
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  ||| ||||||||| | |||  |||| |||| |||| |||||||   |||||||  ||||||||||||||||||| |||||||||||    
T  29445076 caaaagtggaagaatctgaaattacaaggacaaaatctaaatctttttttttacagg-actaaaactggaattcgctaatattacagggacgaaaaga 29445172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 6817391 - 6817475
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattac 103  Q
    ||||||||||  |||||||||||||   |||  |||| ||||||||| ||||||| | ||||||||   ||||||||||||||||    
T  6817391 caaaagtggaagaatatgaaattacagggacaaaatctaaatttttttttttacagagactaaaattaaaattcgctaatattac 6817475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 24837472 - 24837536
Alignment:
Q  52 aatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||| |||| |||| |||||||   |||||||  ||||||||||||||||||| |||||||||||    
T  24837472 aatctaaatctttttttttacagggactaaaactggaattcgctaatattacagggacgaaaaga 24837536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 25772475 - 25772375
Alignment:
Q  15 ggaacaaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaa 114  Q
    ||||||||||||||  ||||||||||||| | |||  |||| |||| |||| ||||||| | |||||||||| ||||||||||||||||| |||||||||    
T  25772475 ggaacaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttt-ttttacagaaactaaaatcgaaattcgctaatattacagggacgaaaa 25772377  T
Q  115 ga 116  Q
    ||    
T  25772376 ga 25772375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 23275021 - 23274920
Alignment:
Q  30 aaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaagacagtattaaccca 129  Q
    |||| ||||||||| ||||| ||||| ||| ||||||||||| | | |||||||||| |||||||| ||||||||||||| |||||   |||||||||||    
T  23275021 aaatctgaaattac-aagacataatctaaactttttattttatagagactaaaatcgaaattcgctcatattacaaggaccaaaag-gggtattaaccca 23274924  T
Q  130 aaaa 133  Q
    ||||    
T  23274923 aaaa 23274920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 12006610 - 12006552
Alignment:
Q  58 aattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||||| |||||||   |||||||||||||||||||||||||||| |||||||||||    
T  12006610 aatttttttttttacagggactaaaatcggaattcgctaatattacagggacgaaaaga 12006552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 31851347 - 31851252
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||||||| |||||||||||||| | |||  |||| |||||||||  ||||||   |||||||||| ||||| ||||||||| |||||||||||||    
T  31851347 caaaagtggaaaaatatgaaattacaatgacagaatctaaatttttt--tttacaggaactaaaatcgaaattcactaatattaaaaggacgaaaaga 31851252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 1250476 - 1250573
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  ||||||||||||    |||  |||| |||| ||||| |||||| | |||||||  |||||||||||||||||||||||||||||||    
T  1250476 caaaagtggaagaatatgaaattaaagggacaaaatctaaatcttttagtttacagagactaaaactggaattcgctaatattacaaggacgaaaaga 1250573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 38879832 - 38879734
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaat-tttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  |||||||||||||   |||  |||| |||| ||||| |||||||   |||||||| ||||||||||||||||||| |||||||||||    
T  38879832 caaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacaggaactaaaattggaattcgctaatattacagggacgaaaaga 38879734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 6465962 - 6465868
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaa 114  Q
    ||||||||||  ||| ||||||||| |  || ||||| |||| |||| |||||||   ||||||| |||||||||||||||||||| |||||||||    
T  6465962 caaaagtggaagaatctgaaattacaagaacataatctaaatatttt-ttttacagggactaaaaccggaattcgctaatattacatggacgaaaa 6465868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 116
Target Start/End: Original strand, 10409701 - 10409740
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||||||||||||||||||||||||| ||| |||||||    
T  10409701 actaaaatcggaattcgctaatattacatggatgaaaaga 10409740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 116
Target Start/End: Original strand, 12006868 - 12006907
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||||||||||||||||||||||||| | |||||||||    
T  12006868 actaaaatcggaattcgctaatattacatgaacgaaaaga 12006907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 116
Target Start/End: Original strand, 24195200 - 24195239
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  24195200 actaaaatcagaattcgctaatattacagggacgaaaaga 24195239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 116
Target Start/End: Complemental strand, 28218228 - 28218189
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  28218228 actaaaaccggaattcgctaatattacagggacgaaaaga 28218189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 116
Target Start/End: Original strand, 28218491 - 28218530
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  28218491 actaaaaccggaattcgctaatattacagggacgaaaaga 28218530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 137
Target Start/End: Complemental strand, 20419632 - 20419527
Alignment:
Q  31 aatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaagacagtattaacccaa 130  Q
    |||||||||||||   |||  |||| |||| |||| |||||||   ||||||| |||||||||||||||||| | |||||||||||  ||||| ||||||    
T  20419632 aatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattatagggacgaaaaga-ggtatttacccaa 20419534  T
Q  131 aaatatt 137  Q
     ||||||    
T  20419533 taatatt 20419527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 23704710 - 23704673
Alignment:
Q  79 taaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  23704710 taaaaccggaattcgctaatattacagggacgaaaaga 23704673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 23704931 - 23705027
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  |||||||||||||   |||  |||| |||| |||| |||||||   ||||||| ||||||||||||||||||||  ||||||||||    
T  23704931 caaaagtggaagaatatgaaattacagggacaaaatctaaatctttt-ttttacagggactaaaaccggaattcgctaatattacagagacgaaaaga 23705027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 7658276 - 7658332
Alignment:
Q  60 ttttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||| ||||||| | ||||||| || |||||| |||||||||| |||||||||||    
T  7658276 tttttttttttacagagactaaaaccgaaattcgttaatattacagggacgaaaaga 7658332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 14795615 - 14795563
Alignment:
Q  62 ttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaa 114  Q
    |||| ||||||||| |||||||  |||||||||| ||||||||||||| ||||    
T  14795615 tttttttttacaaagactaaaactggaattcgctcatattacaaggactaaaa 14795563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 15242607 - 15242555
Alignment:
Q  62 ttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaa 114  Q
    |||| ||||||||| |||||||  |||||||||| ||||||||||||| ||||    
T  15242607 tttttttttacaaagactaaaactggaattcgctcatattacaaggactaaaa 15242555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 31852141 - 31852197
Alignment:
Q  60 ttttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||| ||||||||  ||||||| || |||||| |||||||||| |||||||||||    
T  31852141 tttttttttttacaatgactaaaaccgaaattcgttaatattacagggacgaaaaga 31852197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 48672344 - 48672288
Alignment:
Q  60 ttttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||| ||||||| | ||||||| || ||||| ||||||||||| |||||||||||    
T  48672344 tttttttttttacagagactaaaaccgaaattcactaatattacagggacgaaaaga 48672288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 9516718 - 9516621
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  ||||||||||||| | |||  |||| |||| |||| ||||||||  ||||||| |||||||||||||||||||| |||||||||||    
T  9516718 caaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacaaggactaaaaccggaattcgctaatattacagggacgaaaaga 9516621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 31944221 - 31944317
Alignment:
Q  20 aaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||||||  |||||||||||||   |||  |||| || | |||| ||||||| | ||||||| || |||||||||||||||||||||||||||||    
T  31944221 aaaagtggaagaatatgaaattacatggacaaaatctaattatttttttttacagagactaaaaccgaaattcgctaatattacaaggacgaaaaga 31944317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 116
Target Start/End: Complemental strand, 3273671 - 3273632
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  3273671 actaaaatcggaattcgctaatattacagggacgaaaaga 3273632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 41947126 - 41947221
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||||||| |||||||||||||| | |||  |||| || ||||||  |||| ||  ||||||| || ||||||||||||||||| |||||||||||    
T  41947126 caaaagtggaaaaatatgaaattacaaggacaaaatctaattttttt--tttaaaaggactaaaaccgaaattcgctaatattacagggacgaaaaga 41947221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 9396807 - 9396710
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||||||| |||| ||||||||    |||  |||| |||| |||| ||| ||| | |||||||||| ||||||||||||||||| |||||||||||    
T  9396807 caaaagtggaaaaatttgaaattatagggacaaaatctaaatcttttttttaacagagactaaaatcgaaattcgctaatattacagggacgaaaaga 9396710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 26252507 - 26252604
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  |||||||||||||   |||  |||| |||| |||| |||||||   |||||||  ||||||||||||||||||| |||||||||||    
T  26252507 caaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacaggaactaaaactggaattcgctaatattacagggacgaaaaga 26252604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 37012815 - 37012718
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  ||| |||||||||   |||  |||| |||| |||| ||||||||  ||| ||||  ||||||||||||||||||||||||||||||    
T  37012815 caaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacaaggactgaaattagaattcgctaatattacaaggacgaaaaga 37012718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 46046480 - 46046443
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaa 114  Q
    |||||||||||||||||||||||||||| |||||||||    
T  46046480 actaaaatcggaattcgctaatattacagggacgaaaa 46046443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 9516913 - 9516977
Alignment:
Q  52 aatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||| |||| |||| ||||||| | ||||||| || ||||||||||||||||| |||||||||||    
T  9516913 aatctaaatctttttttttacagagactaaaaccgaaattcgctaatattacagggacgaaaaga 9516977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 15640766 - 15640711
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaagacagtattaacccaaaaa 133  Q
    ||||||| |||||||||||||||||||| |||||||||||  || ||||||||||||    
T  15640766 actaaaaccggaattcgctaatattacagggacgaaaaga-ggtgttaacccaaaaa 15640711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 31090372 - 31090428
Alignment:
Q  60 ttttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||| |||||||   |||||||||| ||||||||||||||||| |||||||||||    
T  31090372 tttttttttttacagggactaaaatcgaaattcgctaatattacagggacgaaaaga 31090428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 116
Target Start/End: Complemental strand, 3018061 - 3018022
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  3018061 actaaaaccggaattcgctaatattacagggacgaaaaga 3018022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 116
Target Start/End: Original strand, 9619243 - 9619346
Alignment:
Q  13 aaggaacaaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaa 112  Q
    ||||| ||||||||||  ||||||||||||| | |||  |||| |||| |||| || ||||   ||||||| | |||||||||||||||||| |||| ||    
T  9619243 aaggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttctacagggactaaaaccagaattcgctaatattacagggacaaa 9619342  T
Q  113 aaga 116  Q
    ||||    
T  9619343 aaga 9619346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 116
Target Start/End: Original strand, 31218309 - 31218348
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  31218309 actaaaaccggaattcgctaatattacagggacgaaaaga 31218348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 116
Target Start/End: Complemental strand, 31943999 - 31943960
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  31943999 actaaaaccggaattcgctaatattacagggacgaaaaga 31943960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 135
Target Start/End: Original strand, 9397026 - 9397083
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaagacagtattaacccaaaaata 135  Q
    ||||||| ||||||| |||||||||||| ||||||||||| |||||| |||| ||||||    
T  9397026 actaaaaccggaatttgctaatattacagggacgaaaaga-agtatttaccctaaaata 9397083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 15640985 - 15641083
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaat-tttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  ||| |||||||||   ||| ||||| |||| ||||| |||||||   | ||||| |||||||| |||||||||||||||||||||||    
T  15640985 caaaagtggaagaatctgaaattacagggacataatctaaatcttttttttttacaggaattaaaaccggaattcactaatattacaaggacgaaaaga 15641083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 9619030 - 9618993
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaa 114  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  9619030 actaaaaccggaattcgctaatattacatggacgaaaa 9618993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 13132267 - 13132304
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaa 114  Q
    |||||||||| ||||||||||||||||| |||||||||    
T  13132267 actaaaatcgaaattcgctaatattacagggacgaaaa 13132304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 38574017 - 38573980
Alignment:
Q  79 taaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  38574017 taaaatcggaattcactaatattacatggacgaaaaga 38573980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 43312316 - 43312227
Alignment:
Q  20 aaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggac 109  Q
    |||||||||| ||| |||||||||   |||  |||  ||||||||| |||||||   ||||||||||||||| |||||||||||| ||||    
T  43312316 aaaagtggaggaatctgaaattacagggacagaatttaaatttttttttttacagggactaaaatcggaatttgctaatattacagggac 43312227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 46046752 - 46046789
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaa 114  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  46046752 actaaaaccggaattcgctaatattacagggacgaaaa 46046789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 48259871 - 48259834
Alignment:
Q  79 taaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  48259871 taaaaccggaattcgctaatattacagggacgaaaaga 48259834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 48580196 - 48580233
Alignment:
Q  79 taaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  48580196 taaaaccggaattcgctaatattacagggacgaaaaga 48580233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 18667601 - 18667657
Alignment:
Q  60 ttttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||| ||||||||  | |||||  ||||||||||||||||||| |||||||||||    
T  18667601 tttttttttttacaaggattaaaactggaattcgctaatattacagggacgaaaaga 18667657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 31090169 - 31090058
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaat-tttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaagac 117  Q
    ||||||||||  |||||||||||||   |||  |||| |||| ||||| |||||||   |||||||||| ||||| ||||||||||| |||| ||||||     
T  31090169 caaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacagggactaaaatcgaaattcactaatattacagggacaaaaaga- 31090071  T
Q  118 agtattaacccaa 130  Q
    |||||| ||||||    
T  31090070 agtatttacccaa 31090058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 33290157 - 33290049
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaagaca 118  Q
    ||||||||||| | ||||||||||| | |||  |||| |||||||||||||||||   |||||||  ||||||||||||||||||| |||| |||| |||    
T  33290157 caaaagtggaggagtatgaaattacaaggacagaatctaaattttttattttacagggactaaaactggaattcgctaatattacagggaccaaaa-aca 33290059  T
Q  119 gtattaaccc 128  Q
    ||||||||||    
T  33290058 gtattaaccc 33290049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 23854796 - 23854682
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaagaca 118  Q
    ||||||||||  |||||||||||||   |||  |||| |||| |||| |||||||   ||||||| || ||||||||||||||||| |||||||||||      
T  23854796 caaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccgaaattcgctaatattacagggacgaaaaga-g 23854698  T
Q  119 gtattaacccaaaaat 134  Q
    ||||||||||||||||    
T  23854697 gtattaacccaaaaat 23854682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 116
Target Start/End: Original strand, 26560883 - 26560922
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26560883 actaaaatcggaattcgctaatattacaaggacgaaaaga 26560922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 30390567 - 30390470
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  |||||||||||||   |||  |||| || |||||| |||||||   | |||||||||||||||||||||||||| |||||||||||    
T  30390567 caaaagtggaagaatatgaaattacagggacaaaatctaattttttttttttacagggattaaaatcggaattcgctaatattacatggacgaaaaga 30390470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 17850637 - 17850582
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaagacagtattaacccaaaaa 133  Q
    |||||||||||||||||||||||||||| |||||||||||  ||||| |||||||||    
T  17850637 actaaaatcggaattcgctaatattacagggacgaaaaga-ggtatttacccaaaaa 17850582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 26135892 - 26135828
Alignment:
Q  52 aatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||| |||| |||| |||||||   |||||||||||||||||||||||||||| |||||||||||    
T  26135892 aatctaaatctttttttttacagggactaaaatcggaattcgctaatattacagggacgaaaaga 26135828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 13254748 - 13254803
Alignment:
Q  61 tttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||| ||||||| | ||||||| |||||||||||||||||||| |||||||||||    
T  13254748 ttttttttttacagagactaaaaccggaattcgctaatattacagggacgaaaaga 13254803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 19251742 - 19251836
Alignment:
Q  21 aaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||  ||||||||||||| | |||  |||| |||| |||| |||||||   ||||||| |||||||| |||||||||||||||||||||||    
T  19251742 aaagtggaagaatatgaaattacaaggacagaatctaaatctttt-ttttacagggactaaaaccggaattcactaatattacaaggacgaaaaga 19251836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 30959943 - 30960037
Alignment:
Q  20 aaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaag 115  Q
    |||||||||| |||||||||||||   ||| ||||| ||| ||||| |||||||   ||||||| |||||||||||||||||||| |||| |||||    
T  30959943 aaaagtggaggaatatgaaattacagggacataatctaaacttttt-ttttacatggactaaaaccggaattcgctaatattacagggaccaaaag 30960037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 13284726 - 13284793
Alignment:
Q  62 ttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaagacagtattaacccaa 130  Q
    ||||||||||||   ||||||| || ||||||||||||||||| |||| ||||| ||||||||||||||    
T  13284726 ttttattttacagggactaaaaccgaaattcgctaatattacagggaccaaaag-cagtattaacccaa 13284793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 21481077 - 21481013
Alignment:
Q  51 taatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaag 115  Q
    ||||| ||||||||| ||||||||  |||||||  |||||||| ||||||||||||||| |||||    
T  21481077 taatctaaatttttttttttacaaggactaaaactggaattcgttaatattacaaggaccaaaag 21481013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 22263504 - 22263560
Alignment:
Q  60 ttttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||| ||||||| | ||||||| |||||||||||||||||||| | |||||||||    
T  22263504 tttttttttttacagagactaaaaccggaattcgctaatattacaggaacgaaaaga 22263560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 116
Target Start/End: Complemental strand, 26236177 - 26236138
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||| | ||||||||||||||||||||||||||||||    
T  26236177 actaaaaccagaattcgctaatattacaaggacgaaaaga 26236138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 39878210 - 39878115
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaa 114  Q
    ||||||||||  ||| |||||||||  | || ||||| |||| | || |||||||   ||||||| ||||||||||||||||||||||||| ||||    
T  39878210 caaaagtggaagaatctgaaattacagatacataatctaaatatctttttttacagggactaaaaccggaattcgctaatattacaaggacaaaaa 39878115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 42670784 - 42670714
Alignment:
Q  60 ttttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaagacagtattaacccaaa 131  Q
    |||||| |||||||   ||||||| |||||||||||| ||||||| |||||||||||  |||||||||||||    
T  42670784 tttttttttttacagggactaaaaccggaattcgctactattacagggacgaaaaga-ggtattaacccaaa 42670714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 17463161 - 17463103
Alignment:
Q  58 aattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||||| |||||||   ||||||| |||||||||||||||||| | |||||||||||    
T  17463161 aatttttttttttacagcgactaaaaccggaattcgctaatattatagggacgaaaaga 17463103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 26136087 - 26136184
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaat-tttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  ||||||||||||| | |||  |||| |||| ||||| |||||||   ||||||| || |||||| ||||||||||||||||||||||    
T  26136087 caaaagtggaagaatatgaaattacaatgacaaaatctaaatcttttttttttacagg-actaaaaccgaaattcgttaatattacaaggacgaaaaga 26136184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 17463361 - 17463458
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  |||||| ||||||   |||  |||| |||| |||| |||||||   ||||||| |||||||||||||||||||| || ||||||||    
T  17463361 caaaagtggaagaatatgcaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacaggggcgaaaaga 17463458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 19251578 - 19251482
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  |||||||||||||   |||  |||| |||| |||| |||||||   ||||||| || ||||||||||||||||| |||||||||||    
T  19251578 caaaagtggaagaatatgaaattacagggacaaaatctaaatctttt-ttttacagggactaaaaccgaaattcgctaatattacagggacgaaaaga 19251482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 23806222 - 23806319
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  |||||||||||||   |||  |||| |||| |||| |||||||   ||||||| || ||||||||||||||||| |||| ||||||    
T  23806222 caaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccgaaattcgctaatattacagggacaaaaaga 23806319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 133
Target Start/End: Original strand, 15106393 - 15106448
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaagacagtattaacccaaaaa 133  Q
    |||||||||| ||||||||||||||||  |||||||||||  ||||| |||||||||    
T  15106393 actaaaatcgaaattcgctaatattacggggacgaaaaga-ggtatttacccaaaaa 15106448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 23046754 - 23046718
Alignment:
Q  80 aaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  23046754 aaaaccggaattcgctcatattacaaggacgaaaaga 23046718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 23855025 - 23855061
Alignment:
Q  80 aaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||| |||||||||||||||||||| |||||||||||    
T  23855025 aaaaccggaattcgctaatattacagggacgaaaaga 23855061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 26560606 - 26560551
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaagacagtattaacccaaaaa 133  Q
    |||||||||| |||||| |||||||||| ||||||||||| | ||||||||| ||||    
T  26560606 actaaaatcgaaattcgttaatattacagggacgaaaagaga-tattaaccctaaaa 26560551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 16294217 - 16294325
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaagaca 118  Q
    ||||||||||| ||||||||||||| | |||  |||| |||||||||||||||||   |||||||||| |||| ||||||||||||  ||| |||| |||    
T  16294217 caaaagtggaggaatatgaaattacaaggacaaaatctaaattttttattttacagggactaaaatcgaaatttgctaatattacatagaccaaaa-aca 16294315  T
Q  119 gtattaaccc 128  Q
    ||||||||||    
T  16294316 gtattaaccc 16294325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 48072231 - 48072328
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  |||||||||||||   ||| ||||| |||| |||| ||||||||  ||||||| |||||||| |||||||||||| ||||||||||    
T  48072231 caaaagtggaagaatatgaaattacagggacataatctaaatatttttttttacaaggactaaaaccggaattcactaatattacaatgacgaaaaga 48072328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 52058119 - 52058022
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  ||| |||||||||   ||| || || |||| |||| ||||||| | ||||||| ||||||||| ||||||||||||||||||||||    
T  52058119 caaaagtggaagaatctgaaattacagggacatagtctaaatctttttttttacagaaactaaaaccggaattcgttaatattacaaggacgaaaaga 52058022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 17606371 - 17606315
Alignment:
Q  60 ttttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||| |||||||   |||||||||||||||||||||||||||| |||||||||||    
T  17606371 tttttttttttacagggactaaaatcggaattcgctaatattacagggacgaaaaga 17606315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 33628960 - 33629057
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  ||| |||||||||   |||  ||||||| |||||| |||||||   ||||||| |||||||||||||||||||| |||| ||||||    
T  33628960 caaaagtggaagaatctgaaattacagggacaaaatcaaattttttttttttacagggactaaaaccggaattcgctaatattacagggacaaaaaga 33629057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 39711180 - 39711085
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  ||||||||||||| | |||  |||| |||| |||| |||||||   ||||||| ||||||||||||||||||||| ||||||||||    
T  39711180 caaaagtggaagaatatgaaattacaaggacaaaatctaaatctttt-ttttacagggactaaaaccggaattcgctaatattacaa-gacgaaaaga 39711085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 39711342 - 39711439
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  |||||||||||||   |||  |||| |||| |||| |||||||   ||||||| | |||||||||||||||||| |||||||||||    
T  39711342 caaaagtggaagaatatgaaattacggggacaaaatctaaatctttttttttacagggactaaaaccagaattcgctaatattacagggacgaaaaga 39711439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 133
Target Start/End: Original strand, 17502057 - 17502112
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaagacagtattaacccaaaaa 133  Q
    ||||||| ||||||||||||||||||||||||| |||||  | ||||||||||||||    
T  17502057 actaaaaccggaattcgctaatattacaaggaccaaaagtga-tattaacccaaaaa 17502112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 29696671 - 29696576
Alignment:
Q  20 aaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||||||  |||||||||||||   |||  |||| |||| |||| ||||||| | ||||||| || ||||||||||||||||| |||||||||||    
T  29696671 aaaagtggaagaatatgaaattacggggacaaaatctaaatctttt-ttttacagagactaaaaccgaaattcgctaatattacagggacgaaaaga 29696576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 116
Target Start/End: Original strand, 17606634 - 17606673
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  17606634 actaaaaccggaattcgctaatattacagggacgaaaaga 17606673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 116
Target Start/End: Complemental strand, 18462336 - 18462297
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  18462336 actaaaaccggaattcgctaatattacagggacgaaaaga 18462297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 116
Target Start/End: Complemental strand, 24467679 - 24467640
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  24467679 actaaaattggaattcgctaatattacagggacgaaaaga 24467640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 42510326 - 42510381
Alignment:
Q  60 ttttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaag 115  Q
    |||||| ||||||||  ||||||| |||||||||||||||||||| |||| |||||    
T  42510326 tttttttttttacaaggactaaaaccggaattcgctaatattacagggaccaaaag 42510381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 17500844 - 17500782
Alignment:
Q  52 aatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaa 114  Q
    |||| ||| ||||| ||||||| | ||||||| |||||||||||||||||||| |||| ||||    
T  17500844 aatctaaacttttttttttacagagactaaaaccggaattcgctaatattacagggaccaaaa 17500782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 134
Target Start/End: Original strand, 34749408 - 34749489
Alignment:
Q  52 aatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaagacagtattaacccaaaaat 134  Q
    |||| |||| |||| ||||||||  ||||||||||||||||| ||||||||||  ||| ||||||  ||||| ||||||||||    
T  34749408 aatctaaatctttttttttacaaggactaaaatcggaattcgataatattacagagacaaaaaga-ggtatttacccaaaaat 34749489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 8292912 - 8292815
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  ||||||||||| |   |||  |||| |||| ||||||||||||   ||||||| ||| ||||||||||| |||| |||||||||||    
T  8292912 caaaagtggaagaatatgaaatttcagggacaaaatctaaatcttttattttacagggactaaaaccgggattcgctaatagtacagggacgaaaaga 8292815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 30299339 - 30299243
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  |||||||||||||   |||  |||| |||| |||| |||||||   |||||||||| | ||||||||||||||| |||||||||||    
T  30299339 caaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagg-actaaaatcgaagttcgctaatattacagggacgaaaaga 30299243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 39826158 - 39826061
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  ||| |||||||||   |||  |||| |||| |||| |||||||   |||||||||| ||||||||||||||| | |||||||||||    
T  39826158 caaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaatcgaaattcgctaatattatatggacgaaaaga 39826061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 39826309 - 39826429
Alignment:
Q  12 aaaggaacaaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacga 111  Q
    |||||| ||||||||||  ||| |||||||||   |||  |||| |||| ||||  ||||||   ||||||| || ||||||||||||||||| ||||||    
T  39826309 aaaggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccgaaattcgctaatattacatggacga 39826408  T
Q  112 aaagacagtattaacccaaaaa 133  Q
    |||||  ||||| |||||||||    
T  39826409 aaaga-ggtatttacccaaaaa 39826429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 43539658 - 43539714
Alignment:
Q  60 ttttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||| |||||||   ||||||| ||||||| |||||||||||| |||||||||||    
T  43539658 tttttttttttacaggaactaaaaccggaatttgctaatattacagggacgaaaaga 43539714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 30789615 - 30789517
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaagaca 118  Q
    ||||||||||| ||| |||||||||  ||||  |||| |||| |||| |||||||   |||||||||||||||||||||||||||| |||||||||||||    
T  30789615 caaaagtggaggaatctgaaattacagagacaaaatctaaatctttt-ttttacagggactaaaatcggaattcgctaatattacagggacgaaaagaca 30789517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 22848548 - 22848600
Alignment:
Q  51 taatcaaaattttttattttacaaatactaaaatcggaattcgctaatattac 103  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  22848548 taatctaaattttttattttacaaggactaaaatcggaattcgctaatattac 22848600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 5555139 - 5555236
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  |||||||||||||   |||  |||| |||| |||| ||||||| | ||||||| || ||||||||||||||||| |||||||||||    
T  5555139 caaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagagactaaaaccgaaattcgctaatattacagggacgaaaaga 5555236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 10108478 - 10108381
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  |||||||||||||   |||  |||| |||| |||| |||||||   ||||||| |||||||||||||||||||| |||||||||||    
T  10108478 caaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaaga 10108381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 116
Target Start/End: Original strand, 7689851 - 7689890
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  7689851 actaaaatcggaattcgctaatattacagggacgaaaaga 7689890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 116
Target Start/End: Complemental strand, 42113035 - 42112996
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  42113035 actaaaatcggaattcgctaatattacagggacgaaaaga 42112996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 42605821 - 42605766
Alignment:
Q  61 tttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||| ||||||| | ||||||||||||||||| |||||||||| |||||||||||    
T  42605821 ttttttttttacagaaactaaaatcggaattcgttaatattacatggacgaaaaga 42605766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 10108640 - 10108737
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  |||||||||||||   |||  |||| |||| |||| |||||||   ||||||| ||||||| |||||||||||| |||||||||||    
T  10108640 caaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaatttgctaatattacagggacgaaaaga 10108737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 14820402 - 14820306
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  |||||||||||||   |||  |||| |||| |||| |||||||   ||||||| |||||||||||||||||||| |||||||||||    
T  14820402 caaaagtggaagaatatgaaattacagggacaaaatctaaatctttt-ttttacaggaactaaaaccggaattcgctaatattacagggacgaaaaga 14820306  T

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Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 14820564 - 14820661
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  |||||||||||||   |||  |||| |||| |||| |||||||   ||||||| |||||||||||||||||||| |||| ||||||    
T  14820564 caaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggactaaaaga 14820661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 21144776 - 21144865
Alignment:
Q  20 aaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggac 109  Q
    |||| ||||| ||| ||||||||| | |||  |||| ||||||||||||||| |   ||||||||||||||||| |||||||||| ||||    
T  21144776 aaaaatggaggaatctgaaattacaaggacaaaatctaaattttttattttatagggactaaaatcggaattcgttaatattacagggac 21144865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 2583395 - 2583343
Alignment:
Q  52 aatcaaaattttttattttacaaatactaaaatcggaattcgctaatattaca 104  Q
    |||| |||| |||||||||||||  |||||||||| |||||||||||||||||    
T  2583395 aatctaaatcttttattttacaagaactaaaatcgaaattcgctaatattaca 2583343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 21148207 - 21148303
Alignment:
Q  20 aaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||||||  ||||||||||||| | |||  |||| || |||||| |||||||   ||||||| |||||||| |||||||||||  ||||||||||    
T  21148207 aaaagtggaagaatatgaaattacaaggacaaaatctaattttttttttttacagggactaaaaccggaattcactaatattacagagacgaaaaga 21148303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 116
Target Start/End: Complemental strand, 5554919 - 5554880
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  5554919 actaaaaccggaattcgctaatattacagggacgaaaaga 5554880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 116
Target Start/End: Original strand, 18044155 - 18044194
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  18044155 actaaaaccggaattcgctaatattacagggacgaaaaga 18044194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 43481627 - 43481682
Alignment:
Q  61 tttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||| ||||||| | ||||||| ||||||||||||||||||||  ||||||||||    
T  43481627 ttttttttttacagagactaaaaccggaattcgctaatattacagtgacgaaaaga 43481682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 116
Target Start/End: Complemental strand, 43851715 - 43851676
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  43851715 actaaaaccggaattcgctaatattacagggacgaaaaga 43851676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 115
Target Start/End: Original strand, 10171471 - 10171509
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaag 115  Q
    ||||||| |||||||||||||||||||| ||||||||||    
T  10171471 actaaaaccggaattcgctaatattacagggacgaaaag 10171509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 26136777 - 26136696
Alignment:
Q  35 tgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||| | |||  |||| ||||||||| |||||||   |||||||  ||||||||||||||||||| | |||||||||    
T  26136777 tgaaattacaaggacaaaatctaaatttttttttttacagggactaaaactggaattcgctaatattacaggaacgaaaaga 26136696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 116
Target Start/End: Complemental strand, 17622929 - 17622901
Alignment:
Q  88 aattcgctaatattacaaggacgaaaaga 116  Q
    |||||||||||||||||||||||||||||    
T  17622929 aattcgctaatattacaaggacgaaaaga 17622901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 116
Target Start/End: Complemental strand, 4612 - 4573
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4612 actaaaatcggaattcgctaatattacaaggacgaaaaga 4573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 116
Target Start/End: Original strand, 9267302 - 9267341
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  9267302 actaaaatcggaattcgctaatattacaaggacgaaaaga 9267341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 9267083 - 9266986
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  |||||||||||||   |||  |||| |||| |||| |||||||   ||||||| |||||||||||||||||||| |||||||||||    
T  9267083 caaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaaga 9266986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 14262144 - 14262047
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  ||| |||||||||   |||  |||| |||| |||| ||||||||  ||||||| |||||||||||||||||||| |||||||||||    
T  14262144 caaaagtggaagaatctgaaattacagggacaaaatctaaatatttttttttacaaggactaaaaccggaattcgctaatattacagggacgaaaaga 14262047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 16722099 - 16722002
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  ||| |||||||||   |||  |||| ||||||||| |||||||   ||||||| |||||||||||||||||||| |||||||||||    
T  16722099 caaaagtggaagaatctgaaattacatggacaaaatctaaatttttttttttacagtgactaaaaccggaattcgctaatattacagggacgaaaaga 16722002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 52552958 - 52553055
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  |||||||||||||  ||||  |||| |||| |||| |||||||   |||||||   ||||||||||||||||||||||||||||||    
T  52552958 caaaagtggaagaatatgaaattacagagacaaaatctaaatctttttttttacagggactaaaactagaattcgctaatattacaaggacgaaaaga 52553055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 14262307 - 14262403
Alignment:
Q  20 aaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||||||  |||||||||||||   |||  |||| |||| |||| |||||||   ||||||| |||||||||||||||||||| |||||||||||    
T  14262307 aaaagtggaacaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaaga 14262403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 5800875 - 5800984
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaagaca 118  Q
    ||||||||||  ||||||||||||| | |||  |||| |||| |||| |||||||   ||||||  |||||||||||||||||||| |||||||||||      
T  5800875 caaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacagggactaaac-cggaattcgctaatattacagggacgaaaaga-g 5800972  T
Q  119 gtattaacccaa 130  Q
    ||||||||||||    
T  5800973 gtattaacccaa 5800984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 116
Target Start/End: Original strand, 35996003 - 35996042
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  35996003 actaaaatcggaattcgctaatattacagggacgaaaaga 35996042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 135
Target Start/End: Complemental strand, 35740867 - 35740810
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaagacagtattaacccaaaaata 135  Q
    ||||||| |||||||||||||||||||| |||| |||||  ||||||||||||||||||    
T  35740867 actaaaaccggaattcgctaatattacagggaccaaaag-tagtattaacccaaaaata 35740810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 1067789 - 1067709
Alignment:
Q  52 aatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaagacagtattaacccaaaaa 133  Q
    |||| ||| ||||| ||||||||| || |||||| ||||||||| ||||||||||||| ||||||  ||||||||| |||||    
T  1067789 aatctaaacttttttttttacaaagaccaaaatcagaattcgctgatattacaaggaccaaaaga-ggtattaaccaaaaaa 1067709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 14161979 - 14161882
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  |||||||||||||   ||| ||||| |||| |||| ||||| |   |||||||  ||||||||||||||||||| |||||||||||    
T  14161979 caaaagtggaagaatatgaaattacagggacataatctaaatctttttttttataggaactaaaactggaattcgctaatattacagggacgaaaaga 14161882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 19720429 - 19720344
Alignment:
Q  31 aatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||||||||||   |||  |||| |||| |||| |||||||   ||||||| |||||||||||||||||||| |||||||||||    
T  19720429 aatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaaga 19720344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 30500311 - 30500407
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  |||||||||||||   |||  |||| ||||||||| |||||||   |||||||  ||||||||||||||||||| |||||||||||    
T  30500311 caaaagtggaacaatatgaaattacagggacaaaatctaaatttttt-ttttacagggactaaaactggaattcgctaatattacagggacgaaaaga 30500407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 115
Target Start/End: Complemental strand, 14171635 - 14171599
Alignment:
Q  79 taaaatcggaattcgctaatattacaaggacgaaaag 115  Q
    |||||||||||||||||||||||||| ||||||||||    
T  14171635 taaaatcggaattcgctaatattacagggacgaaaag 14171599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 14162198 - 14162252
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaagacagtattaacccaaaa 132  Q
    ||||||| |||||||||||||||||||| |||| ||||||  ||||||||||||||    
T  14162198 actaaaaccggaattcgctaatattacagggacaaaaaga-ggtattaacccaaaa 14162252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 116
Target Start/End: Original strand, 14171914 - 14171953
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  14171914 actaaaaccggaattcgctaatattacagggacgaaaaga 14171953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 116
Target Start/End: Original strand, 17465675 - 17465734
Alignment:
Q  57 aaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||| |||||||||||| | | |||||  | |||||||||||||||||||||||||||||    
T  17465675 aaatattttattttacagagattaaaactgaaattcgctaatattacaaggacgaaaaga 17465734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 116
Target Start/End: Complemental strand, 19112814 - 19112775
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  19112814 actaaaaccggaattcgctaatattacatggacgaaaaga 19112775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 49986798 - 49986895
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaattt-tttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||  ||||||||||||| |||||  |||| |||||| ||| |||||||   ||||||| || ||||||||||||||||  |||||||||||    
T  49986798 caaaagtggaagaatatgaaattac-aagacaaaatctaaatttcttttttttacaggaactaaaaccgaaattcgctaatattactgggacgaaaaga 49986895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 116
Target Start/End: Complemental strand, 17465427 - 17465378
Alignment:
Q  67 ttttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||||  |||||||||| |||||||||||||||| |||||| ||||||    
T  17465427 ttttacaggtactaaaatcagaattcgctaatattaaaaggacaaaaaga 17465378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 45969990 - 45969926
Alignment:
Q  52 aatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||| |||| |||| |||||||   ||||||| |||||||| ||||||||||| |||||||||||    
T  45969990 aatctaaatctttttttttacagggactaaaaccggaattcactaatattacagggacgaaaaga 45969926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 15939 - 15995
Alignment:
Q  60 ttttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    |||||| ||||||| | ||||||| |||||||||||||||||||| |||||||||||    
T  15939 tttttttttttacagagactaaaaccggaattcgctaatattacatggacgaaaaga 15995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 3945 - 3880
Alignment:
Q  51 taatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||| |||| |||| |||||||   ||||||| |||||||||||||||||||| |||||||||||    
T  3945 taatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaaga 3880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 7332 - 7237
Alignment:
Q  21 aaagtggagaaatatgaaattactaagacctaatcaaaattttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||  |||||||||||||   |||  |||| |||| |||| |||||||   ||||| | | ||||||||||||||||||||||||||||||    
T  7332 aaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacaggaactaacaccagaattcgctaatattacaaggacgaaaaga 7237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 7528 - 7565
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaa 114  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  7528 actaaaaccggaattcgctaatattacagggacgaaaa 7565  T

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Target: scaffold0220 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 26529 - 26479
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaagacagtattaaccc 128  Q
    ||||||||||||||||  ||||||||||||||| |||| |||||||||||||    
T  26529 actaaaatcggaattcagtaatattacaaggaccaaaa-acagtattaaccc 26479  T

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Target: scaffold0117 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 116
Target Start/End: Original strand, 12310 - 12349
Alignment:
Q  77 actaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  12310 actaaaaccggaattcgctaatattacagggacgaaaaga 12349  T

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Target: scaffold0352 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 5948 - 6046
Alignment:
Q  19 caaaagtggagaaatatgaaattactaagacctaatcaaaa-ttttttattttacaaatactaaaatcggaattcgctaatattacaaggacgaaaaga 116  Q
    ||||||||||| ||| |||||||||   |||  |||| ||| |||||| |||||||   ||||||||||||||||||||||||| || |||| ||||||    
T  5948 caaaagtggaggaatctgaaattacagggacagaatctaaactttttttttttacagggactaaaatcggaattcgctaatattgcagggaccaaaaga 6046  T

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