View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15188_low_17 (Length: 267)
Name: NF15188_low_17
Description: NF15188
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15188_low_17 |
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Alignment Details
Target: chr4 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 28035683 - 28035941
Alignment:
| Q |
1 |
tggtttgaaagcagagcgtctcaattctgcatgttctgctgccacagatgttatttccatcaaagccattgctgaataatgttgcacatcatctgtaccc |
100 |
Q |
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| T |
28035683 |
tggtttgaaagcagaacgtctcaattctgcatgttctgctgccacagatgttatttccatcaaagccattgctgaataatgttgcacatcatcagtaccc |
28035782 |
T |
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| Q |
101 |
ttttccaacaaaaccgcgaaacacaaaagagctcttgattctgtaattgtatgacaaatagtaacatttcttctacacaattgccataaagctctagctg |
200 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28035783 |
ttttccaacaaaaccgcaaaacacaaaagagctcttgattctgtaattgtatgacaaatagtaacatttcttctacacaattgccataaagctctagctg |
28035882 |
T |
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| Q |
201 |
ccattgctttcatttgtgcctttgtttcaggatcttcaaattctctccctttgctactc |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
28035883 |
ccattgctttcatttgtgcctttgtttcaggatcttcaaattctctccctttgatactc |
28035941 |
T |
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