View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15188_low_26 (Length: 231)

Name: NF15188_low_26
Description: NF15188
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15188_low_26
NF15188_low_26
[»] chr5 (12 HSPs)
chr5 (29-217)||(10555387-10555576)
chr5 (29-217)||(33766493-33766682)
chr5 (29-217)||(42994485-42994667)
chr5 (112-217)||(23244294-23244399)
chr5 (29-124)||(23237751-23237846)
chr5 (103-217)||(23237049-23237163)
chr5 (104-217)||(33767269-33767382)
chr5 (119-217)||(42995280-42995378)
chr5 (103-217)||(10556174-10556290)
chr5 (168-217)||(14350517-14350566)
chr5 (177-214)||(27099551-27099588)
chr5 (182-215)||(42948183-42948216)
[»] chr4 (7 HSPs)
chr4 (29-217)||(21436114-21436303)
chr4 (103-217)||(21435408-21435522)
chr4 (103-217)||(24195590-24195705)
chr4 (115-217)||(15539844-15539946)
chr4 (81-157)||(24196350-24196426)
chr4 (116-214)||(11311405-11311503)
chr4 (116-217)||(11310714-11310815)
[»] chr6 (5 HSPs)
chr6 (81-217)||(25344854-25344990)
chr6 (119-217)||(25345548-25345646)
chr6 (116-214)||(29414477-29414575)
chr6 (116-217)||(29413724-29413825)
chr6 (178-214)||(21777854-21777890)
[»] chr7 (8 HSPs)
chr7 (29-217)||(20008958-20009128)
chr7 (42-217)||(20123145-20123317)
chr7 (102-217)||(4163365-4163480)
chr7 (118-217)||(4167119-4167218)
chr7 (99-217)||(29527133-29527251)
chr7 (103-217)||(29525115-29525229)
chr7 (103-217)||(20122587-20122701)
chr7 (109-217)||(20008248-20008356)
[»] chr3 (7 HSPs)
chr3 (32-217)||(263539-263725)
chr3 (99-201)||(40144996-40145098)
chr3 (103-217)||(264327-264441)
chr3 (183-217)||(48452923-48452957)
chr3 (138-215)||(40144815-40144892)
chr3 (178-214)||(29809277-29809313)
chr3 (181-217)||(33639658-33639694)
[»] chr2 (5 HSPs)
chr2 (109-217)||(26233857-26233965)
chr2 (32-217)||(26234729-26234914)
chr2 (102-217)||(19379021-19379136)
chr2 (181-215)||(8194280-8194314)
chr2 (116-216)||(44289605-44289705)
[»] chr1 (8 HSPs)
chr1 (81-217)||(17537013-17537149)
chr1 (117-214)||(16386265-16386362)
chr1 (116-214)||(1614857-1614955)
chr1 (42-133)||(5216814-5216905)
chr1 (116-214)||(39772027-39772125)
chr1 (116-217)||(39772675-39772776)
chr1 (103-164)||(48518554-48518615)
chr1 (181-217)||(19990284-19990320)
[»] chr8 (4 HSPs)
chr8 (138-217)||(18684315-18684394)
chr8 (138-217)||(18729880-18729959)
chr8 (115-164)||(8843889-8843938)
chr8 (116-214)||(42269378-42269476)
[»] scaffold0548 (2 HSPs)
scaffold0548 (116-214)||(6899-6997)
scaffold0548 (116-217)||(7587-7688)


Alignment Details
Target: chr5 (Bit Score: 162; Significance: 1e-86; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 29 - 217
Target Start/End: Complemental strand, 10555576 - 10555387
Alignment:
Q  29 tagttgtgtttataaa-ggtaaatattgatggagtcaaatgatgaaaattgtgattaatgtggtgagattggttaaggtaaatgaggtcacatgattatt 127  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10555576 tagttgtgtttataaaaggtaaatattgatggagtcaaatgatgaaaattgtaattaatgtggtgagattggttaaggtaaatgaggtcacatgattatt 10555477  T
Q  128 aataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagtcaatat 217  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  10555476 aataagcatcaaatctagtccattaaaattagataaattgaagggtgaggatgtggagtaactctttagacttactcttggagtcaatat 10555387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 29 - 217
Target Start/End: Complemental strand, 33766682 - 33766493
Alignment:
Q  29 tagttgtgtttataaa-ggtaaatattgatggagtcaaatgatgaaaattgtgattaatgtggtgagattggttaaggtaaatgaggtcacatgattatt 127  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33766682 tagttgtgtttataaaaggtaaatattgatggagtcaaatgatgaaaattgtaattaatgtggtgagattggttaaggtaaatgaggtcacatgattatt 33766583  T
Q  128 aataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagtcaatat 217  Q
    |||||||||||||| |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  33766582 aataagcatcaaatatagtccattaaaattagataaattgaagggtgaggatgtggagtaactctttagacttactcttggagtcaatat 33766493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 29 - 217
Target Start/End: Complemental strand, 42994667 - 42994485
Alignment:
Q  29 tagttgtgtttataaa-ggtaaatattgatggagtcaaatgatgaaaattgtgattaatgtggtgagattggttaaggtaaatgaggtcacatgattatt 127  Q
    |||||||||||||||| ||||||||||||||||||       |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  42994667 tagttgtgtttataaaaggtaaatattgatggagt-------tgaaaattgtaattaatgtggtgagattggttaaggtaaatgaggtcacatgattatt 42994575  T
Q  128 aataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagtcaatat 217  Q
    ||||||||||||||||||||| ||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  42994574 aataagcatcaaatctagtccgttaaaattagataaattgaagggtgaggatgtggagtaactctttagacttactcttggagtcaatat 42994485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 112 - 217
Target Start/End: Original strand, 23244294 - 23244399
Alignment:
Q  112 aggtcacatgattattaataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagt 211  Q
    ||||||||||||||| ||||||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  23244294 aggtcacatgattatcaataagcatcaaatctagttcattaaaattagataaattgaagggtgaggatgtggagtaactctttagacttactcttggagt 23244393  T
Q  212 caatat 217  Q
    ||||||    
T  23244394 caatat 23244399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 23237751 - 23237846
Alignment:
Q  29 tagttgtgtttataaa-ggtaaatattgatggagtcaaatgatgaaaattgtgattaatgtggtgagattggttaaggtaaatgaggtcacatgatt 124  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23237751 tagttgtgtttataaaaggtaaatattgatggagtcaaatgatgaaa-ttgtaattaatgtggtgagattggttaaggtaaatgaggtcacatgatt 23237846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 103 - 217
Target Start/End: Complemental strand, 23237163 - 23237049
Alignment:
Q  103 aggtaaatgaggtcacatgattattaataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttac 202  Q
    ||||| ||||| ||| |||||||||||||| |   |||||| |||||||||||||| ||||| || |||||||| |||||||||||||||||||||||||    
T  23237163 aggtagatgagatcatatgattattaataacccataaatcttgtccattaaatttagataaaatggagggtgaggatgtggagtaactctttagacttac 23237064  T
Q  203 tcttagagtcaatat 217  Q
    |||| ||||||||||    
T  23237063 tcttggagtcaatat 23237049  T

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Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 104 - 217
Target Start/End: Original strand, 33767269 - 33767382
Alignment:
Q  104 ggtaaatgaggtcacatgattattaataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttact 203  Q
    |||| ||||| ||| |||||||||||||| |   |||||| | |||||||||||| ||||| || |||||||| |||||||||||||||||| |||||||    
T  33767269 ggtagatgagatcatatgattattaataacctataaatcttggccattaaatttagataaaatggagggtgaggatgtggagtaactctttaaacttact 33767368  T
Q  204 cttagagtcaatat 217  Q
    ||| ||||||||||    
T  33767369 cttggagtcaatat 33767382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 217
Target Start/End: Original strand, 42995280 - 42995378
Alignment:
Q  119 atgattattaataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagtcaatat 217  Q
    |||||||||||||| |   |||||| |||||||||||||| ||||| || |||||||| |||||||||||||||||| ||||||| || ||||||||||    
T  42995280 atgattattaataaccgataaatcttgtccattaaatttagataaaatggagggtgaggatgtggagtaactctttaaacttactattggagtcaatat 42995378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 103 - 217
Target Start/End: Original strand, 10556174 - 10556290
Alignment:
Q  103 aggtaaatgaggtcacatgattattaataagcatcaaatctagtccattaaatttaaa--taaattgaagggtgagaatgtggagtaactctttagactt 200  Q
    ||||| ||||| ||| |||||||||||||| |   ||| || |||||||||||||| |  |||| || | |||||| |||||||||||||||||||||||    
T  10556174 aggtagatgagatcatatgattattaataacccataaaacttgtccattaaatttatagataaaatggaaggtgaggatgtggagtaactctttagactt 10556273  T
Q  201 actcttagagtcaatat 217  Q
    | |||| ||||||||||    
T  10556274 agtcttggagtcaatat 10556290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 14350517 - 14350566
Alignment:
Q  168 aagggtgagaatgtggagtaactctttagacttactcttagagtcaatat 217  Q
    ||||||||  |||||||||||||||||| | |||||||| ||||||||||    
T  14350517 aagggtgacgatgtggagtaactctttaaagttactcttcgagtcaatat 14350566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 27099588 - 27099551
Alignment:
Q  177 aatgtggagtaactctttagacttactcttagagtcaa 214  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  27099588 aatgtggagtaactctttagagttactcttggagtcaa 27099551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 42948183 - 42948216
Alignment:
Q  182 ggagtaactctttagacttactcttagagtcaat 215  Q
    ||||||||||||||||||||||||| ||||||||    
T  42948183 ggagtaactctttagacttactcttggagtcaat 42948216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 154; Significance: 8e-82; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 29 - 217
Target Start/End: Original strand, 21436114 - 21436303
Alignment:
Q  29 tagttgtgtttataaa-ggtaaatattgatggagtcaaatgatgaaaattgtgattaatgtggtgagattggttaaggtaaatgaggtcacatgattatt 127  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  21436114 tagttgtgtttataaaaggtaaatattgatggagtcaaatgatgaaaattgtaattaatgtggtgagattggttaaggtaaatggggtcacatgattatt 21436213  T
Q  128 aataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagtcaatat 217  Q
    |||||||||||||| |||||||||||| ||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  21436214 aataagcatcaaatttagtccattaaaattagataaattgaagggtgaggatgtggagtaactttttagacttactcttagagtcaatat 21436303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 103 - 217
Target Start/End: Complemental strand, 21435522 - 21435408
Alignment:
Q  103 aggtaaatgaggtcacatgattattaataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttac 202  Q
    ||||| ||||| ||| |||||||||||||| |   |||||| |||| ||||||||| ||||| || |||||||| |||||||||||||||||| |||||     
T  21435522 aggtagatgagatcatatgattattaataacccataaatcttgtcctttaaatttagataaaatggagggtgaggatgtggagtaactctttaaacttat 21435423  T
Q  203 tcttagagtcaatat 217  Q
    |||||||||||||||    
T  21435422 tcttagagtcaatat 21435408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 103 - 217
Target Start/End: Complemental strand, 24195705 - 24195590
Alignment:
Q  103 aggtaaatgaggtcacatgattattaataagcatcaaatctagtccattaaa-tttaaataaattgaagggtgagaatgtggagtaactctttagactta 201  Q
    ||||| ||||| |||||||||||||| ||||  | ||||||||||||||||| |||  ||||| || |||| ||| |||||||||||||||||||| |||    
T  24195705 aggtagatgagatcacatgattattagtaagatttaaatctagtccattaaactttgtataaaatggagggcgaggatgtggagtaactctttagagtta 24195606  T
Q  202 ctcttagagtcaatat 217  Q
    ||||| ||||||||||    
T  24195605 ctcttggagtcaatat 24195590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 217
Target Start/End: Complemental strand, 15539946 - 15539844
Alignment:
Q  115 tcacatgattattaataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagtcaa 214  Q
    ||||||||| |||||||||  | |||| || ||||||| ||||| ||||| ||||||||||| |||||||||||||||||| | |||||||| |||||||    
T  15539946 tcacatgataattaataagacttaaatataatccattagatttatataaaatgaagggtgaggatgtggagtaactctttatagttactcttggagtcaa 15539847  T
Q  215 tat 217  Q
    |||    
T  15539846 tat 15539844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 157
Target Start/End: Original strand, 24196350 - 24196426
Alignment:
Q  81 attaatgtggtgagattggttaaggtaaatgaggtcacatgattattaataagcatcaaatctagtccattaaattt 157  Q
    |||||| | |||||| | ||||| ||||||||||||||||||||  ||||||| || ||||||||||||||||||||    
T  24196350 attaatattgtgagaattgttaaagtaaatgaggtcacatgattggtaataagaattaaatctagtccattaaattt 24196426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 214
Target Start/End: Original strand, 11311405 - 11311503
Alignment:
Q  116 cacatgattattaataag-catcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagtcaa 214  Q
    |||||||||||||||||| ||| |||| |||||||||| ||| | ||||| | || |||| | ||||||||||||||||| || |||||||| |||||||    
T  11311405 cacatgattattaataagacat-aaatgtagtccattagattaagataaaattaatggtggggatgtggagtaactcttttgagttactcttggagtcaa 11311503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 217
Target Start/End: Complemental strand, 11310815 - 11310714
Alignment:
Q  116 cacatgattattaataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagtcaat 215  Q
    |||||||||||| |||||  | |||| || ||||||| ||| ||||||| | || ||||   |||||||||||||| ||||| |||||||| ||||||||    
T  11310815 cacatgattattgataagacttaaatgtaatccattagattaaaataaaattaaaggtggagatgtggagtaactccttagagttactcttggagtcaat 11310716  T
Q  216 at 217  Q
    ||    
T  11310715 at 11310714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 9e-60; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 81 - 217
Target Start/End: Complemental strand, 25344990 - 25344854
Alignment:
Q  81 attaatgtggtgagattggttaaggtaaatgaggtcacatgattattaataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatg 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||| |||    
T  25344990 attaatgtggtgagattggttaaggtaaatgaggtcacatgattattaataaccatcaaatctagtccattaaaattagataaattgaagggtgaggatg 25344891  T
Q  181 tggagtaactctttagacttactcttagagtcaatat 217  Q
    |||||||||||||||||||||||||| ||||||||||    
T  25344890 tggagtaactctttagacttactcttggagtcaatat 25344854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 217
Target Start/End: Original strand, 25345548 - 25345646
Alignment:
Q  119 atgattattaataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagtcaatat 217  Q
    |||||||||||||| |   |||||| || ||||||||||| ||||| || |||||||| |||||||||||||||||| |||||||||| ||||||||||    
T  25345548 atgattattaataacctataaatcttgttcattaaatttagataaaatggagggtgaggatgtggagtaactctttacacttactcttggagtcaatat 25345646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 214
Target Start/End: Original strand, 29414477 - 29414575
Alignment:
Q  116 cacatgattattaataag-catcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagtcaa 214  Q
    |||||||||||||||||| ||| |||| |||||||||| ||| | |||||   || |||| | |||||||||||||||||||| |||||||| |||||||    
T  29414477 cacatgattattaataagacat-aaatgtagtccattagattaagataaaactaatggtggggatgtggagtaactctttagagttactcttggagtcaa 29414575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 217
Target Start/End: Complemental strand, 29413825 - 29413724
Alignment:
Q  116 cacatgattattaataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagtcaat 215  Q
    |||||||||||| |||||  | |||| || | ||||| ||| ||||||| | || |||| | |||||||||||||  ||||| |||||||| ||||||||    
T  29413825 cacatgattattgataagacttaaatgtaatacattagattaaaataaaattaaaggtggggatgtggagtaacttcttagagttactcttggagtcaat 29413726  T
Q  216 at 217  Q
    ||    
T  29413725 at 29413724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 21777854 - 21777890
Alignment:
Q  178 atgtggagtaactctttagacttactcttagagtcaa 214  Q
    |||||||||||||||||||| |||||||| |||||||    
T  21777854 atgtggagtaactctttagagttactcttggagtcaa 21777890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 1e-49; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 29 - 217
Target Start/End: Original strand, 20008958 - 20009128
Alignment:
Q  29 tagttgtgtttataaa-ggtaaatattgatggagtcaaatgatgaaaattgtgattaatgtggtgagattggttaaggtaaatgaggtcacatgattatt 127  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  20008958 tagttgtgtttataaaaggtaaatattggtggagtcaaatgatgaaaattgtaattaatgtggtgagattggttaaggtaaatgaggtcacatgattatt 20009057  T
Q  128 aataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagtcaatat 217  Q
    |||||||||||                   | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  20009058 aataagcatca-------------------agataaattgaagggtgaggatgtggagtaactctttagacttactcttggagtcaatat 20009128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 42 - 217
Target Start/End: Original strand, 20123145 - 20123317
Alignment:
Q  42 aaaggtaaatattgatggagtcaaatgatgaaaattgtgattaatgtggtgagattggttaaggtaaatgaggtcacatgattattaataagcatcaaat 141  Q
    ||||||||||| |||| |||||||| ||   |||  || |||||| | |||||| |||||||||| |||||| ||||||||||||||||||| || ||||    
T  20123145 aaaggtaaataatgattgagtcaaaaga---aaacggtaattaatattgtgagaatggttaaggtgaatgagatcacatgattattaataagaattaaat 20123241  T
Q  142 ctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagtcaatat 217  Q
    ||||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  20123242 ctagtccattaaatttagataaaatggagggtgaggatgtggagtaactctttagacttactcttggagtcaatat 20123317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 102 - 217
Target Start/End: Complemental strand, 4163480 - 4163365
Alignment:
Q  102 aaggtaaatgaggtcacatgattattaataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagactta 201  Q
    ||||| |||||||||||||||||||||||||| || ||||||||||||||||||||| ||||| || |||||||| |||||||||| ||||||| |||||    
T  4163480 aaggtgaatgaggtcacatgattattaataagtattaaatctagtccattaaatttagataaaatggagggtgaggatgtggagtagctctttatactta 4163381  T
Q  202 ctcttagagtcaatat 217  Q
    ||||| ||||||||||    
T  4163380 ctcttggagtcaatat 4163365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 118 - 217
Target Start/End: Original strand, 4167119 - 4167218
Alignment:
Q  118 catgattattaataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagtcaatat 217  Q
    |||||||||||| ||| || ||||||||||||||||||||| ||||| || |||||||| |||||||||| ||||||| |||||||||| ||||||||||    
T  4167119 catgattattaaaaagaattaaatctagtccattaaatttagataaaatggagggtgaggatgtggagtagctctttatacttactcttggagtcaatat 4167218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 99 - 217
Target Start/End: Original strand, 29527133 - 29527251
Alignment:
Q  99 gttaaggtaaatgaggtcacatgattattaataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagac 198  Q
    ||||| ||||||||||||||||||||  ||||||  || |||||||||||||||||||| |||||| || |||||||  ||||||||||||||||||||     
T  29527133 gttaaagtaaatgaggtcacatgattggtaataaaaattaaatctagtccattaaattttaataaaatggagggtgacgatgtggagtaactctttagag 29527232  T
Q  199 ttactcttagagtcaatat 217  Q
    ||||| || ||||| ||||    
T  29527233 ttacttttggagtctatat 29527251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 103 - 217
Target Start/End: Complemental strand, 29525229 - 29525115
Alignment:
Q  103 aggtaaatgaggtcacatgattattaataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttac 202  Q
    ||||| ||||| |||||||||||||| ||||  | ||||||||||||||||| ||  ||||| || |||| ||| |||||||||||||||||||| ||||    
T  29525229 aggtagatgagatcacatgattattagtaagacttaaatctagtccattaaactttgataaaatggagggcgaggatgtggagtaactctttagagttac 29525130  T
Q  203 tcttagagtcaatat 217  Q
    |||| ||||||||||    
T  29525129 tcttggagtcaatat 29525115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 217
Target Start/End: Complemental strand, 20122701 - 20122587
Alignment:
Q  103 aggtaaatgaggtcacatgattattaataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttac 202  Q
    ||||| ||||| ||| |||||||||||||||    ||||||| ||||||||||||| ||||| || |||||||| || |||||||||| |||||| ||||    
T  20122701 aggtagatgagatcatatgattattaataagatataaatctaatccattaaatttagataaaatggagggtgaggatctggagtaactttttagatttac 20122602  T
Q  203 tcttagagtcaatat 217  Q
    |||| ||||||||||    
T  20122601 tcttggagtcaatat 20122587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 20008356 - 20008248
Alignment:
Q  109 atgaggtcacatgattattaataagcatc-aaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactctta 207  Q
    ||||| ||| |||||||||||||| |||  |||||| |||||||||||||| ||||| || || ||||| |||| ||||||||||||||||||||||||     
T  20008356 atgagatcatatgattattaataa-catataaatcttgtccattaaatttagataaaatggagagtgaggatgtagagtaactctttagacttactcttg 20008258  T
Q  208 gagtcaatat 217  Q
    ||||||||||    
T  20008257 gagtcaatat 20008248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 263725 - 263539
Alignment:
Q  32 ttgtgtttataaag-gtaaatattgatggagtcaaatgatgaaaattgtgattaatgtggtgagattggttaaggtaaatgaggtcacatgattattaat 130  Q
    |||||||||||||  | ||||||||||  ||||||| || ||||||  | |||||| | |||||| | ||||| ||||||||||||||||||||  ||||    
T  263725 ttgtgtttataaaaaggaaatattgatcaagtcaaaagaagaaaatcataattaatattgtgagaattgttaaagtaaatgaggtcacatgattggtaat 263626  T
Q  131 aagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagtcaatat 217  Q
    ||| || ||| ||| |||||||||||| |||||| || |||||||| |||||||||||||||||||| |||||||| ||||||||||    
T  263625 aagaattaaaactaatccattaaattttaataaaatggagggtgaggatgtggagtaactctttagagttactcttggagtcaatat 263539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 40144996 - 40145098
Alignment:
Q  99 gttaaggtaaatgaggtcacatgattattaataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagac 198  Q
    ||||| ||||||||| ||||||||||||||||||| || |||| ||||| |||||| ||| ||||||| |||||||   |||||||||||||||||||||    
T  40144996 gttaacgtaaatgagatcacatgattattaataagaattaaatttagtctattaaaattagataaattaaagggtggagatgtggagtaactctttagac 40145095  T
Q  199 tta 201  Q
    |||    
T  40145096 tta 40145098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 217
Target Start/End: Original strand, 264327 - 264441
Alignment:
Q  103 aggtaaatgaggtcacatgattattaataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttac 202  Q
    ||||| ||||| |||||||||||||| ||||  | ||||||||||||||||| ||  ||||| || ||||  || |||||||||||||||||||| ||||    
T  264327 aggtagatgagatcacatgattattagtaagacttaaatctagtccattaaactttgataaaatggagggcaaggatgtggagtaactctttagagttac 264426  T
Q  203 tcttagagtcaatat 217  Q
    |||| ||||||||||    
T  264427 tcttggagtcaatat 264441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 48452957 - 48452923
Alignment:
Q  183 gagtaactctttagacttactcttagagtcaatat 217  Q
    |||||||||||||||||||||||||||||||||||    
T  48452957 gagtaactctttagacttactcttagagtcaatat 48452923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 40144815 - 40144892
Alignment:
Q  138 aaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagtcaat 215  Q
    |||| ||||||||||| |||| ||||| |  ||||| || || ||||||||||||||||||||||||||  |||||||    
T  40144815 aaatttagtccattaattttagataaaatagagggttaggatttggagtaactctttagacttactcttgaagtcaat 40144892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 29809277 - 29809313
Alignment:
Q  178 atgtggagtaactctttagacttactcttagagtcaa 214  Q
    |||||||||||||||||||| |||||||| |||||||    
T  29809277 atgtggagtaactctttagaattactcttggagtcaa 29809313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 33639658 - 33639694
Alignment:
Q  181 tggagtaactctttagacttactcttagagtcaatat 217  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  33639658 tggagtaagtctttagacttactcttggagtcaatat 33639694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 26233965 - 26233857
Alignment:
Q  109 atgaggtcacatgattattaataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttag 208  Q
    ||||| || |||||||||||||||| || ||||||||||||||||||||| ||||| || |||||||| |||||||||| ||||||| |||||||||| |    
T  26233965 atgagatcccatgattattaataagaattaaatctagtccattaaatttagataaaatggagggtgaggatgtggagtagctctttatacttactcttgg 26233866  T
Q  209 agtcaatat 217  Q
    |||||||||    
T  26233865 agtcaatat 26233857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 217
Target Start/End: Original strand, 26234729 - 26234914
Alignment:
Q  32 ttgtgtttataaa-ggtaaatattgatggagtcaaatgatgaaaattgtgattaatgtggtgagattggttaaggtaaatgaggtcacatgattattaat 130  Q
    ||||||||||||| ||||||||||||| |||||||| ||  ||||  || ||||||   |||||||| |||||||| |||||||||||||||||||||||    
T  26234729 ttgtgtttataaaaggtaaatattgattgagtcaaaagaa-aaaacggtaattaattatgtgagattagttaaggtgaatgaggtcacatgattattaat 26234827  T
Q  131 aagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagtcaatat 217  Q
    ||| || ||||||| |||||||||||   ||||| |  | |||||| |||||||||| || |||| ||||||||||  |||||||||    
T  26234828 aagaattaaatctaatccattaaattctgataaaatagaaggtgaggatgtggagtagctttttatacttactcttgaagtcaatat 26234914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 217
Target Start/End: Original strand, 19379021 - 19379136
Alignment:
Q  102 aaggtaaatgaggtcacatgattattaataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagactta 201  Q
    |||| ||||||||||||||||| |||||||||  | ||||| ||||||||| ||| |  | || |||||||||| |||||||||||||| |||| |||||    
T  19379021 aaggaaaatgaggtcacatgataattaataagactaaaatcaagtccattagattaagttgaaatgaagggtgaaaatgtggagtaactatttaaactta 19379120  T
Q  202 ctcttagagtcaatat 217  Q
    |||||  |||||||||    
T  19379121 ctcttgaagtcaatat 19379136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 8194280 - 8194314
Alignment:
Q  181 tggagtaactctttagacttactcttagagtcaat 215  Q
    |||||||||||||||||||||||||| ||||||||    
T  8194280 tggagtaactctttagacttactcttggagtcaat 8194314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 216
Target Start/End: Complemental strand, 44289705 - 44289605
Alignment:
Q  116 cacatgattattaataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagtcaat 215  Q
    |||||||||||| |||||  | |||| || ||||||| ||| ||||||| | || ||||   |||||||||||||| ||| | |||||||| ||||||||    
T  44289705 cacatgattattgataagacttaaatgtaatccattagattaaaataaaattaaaggtggagatgtggagtaactccttaaagttactcttggagtcaat 44289606  T
Q  216 a 216  Q
    |    
T  44289605 a 44289605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 1e-21; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 81 - 217
Target Start/End: Complemental strand, 17537149 - 17537013
Alignment:
Q  81 attaatgtggtgagattggttaaggtaaatgaggtcacatgattattaataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatg 180  Q
    |||||| | |||||| ||||||||||| ||||| ||| ||||| ||||||||| || |||  || | || || ||||| ||||| ||||||||||| |||    
T  17537149 attaatattgtgagaatggttaaggtagatgagatcatatgataattaataagaattaaacttaatgcaatagatttatataaaatgaagggtgaggatg 17537050  T
Q  181 tggagtaactctttagacttactcttagagtcaatat 217  Q
    ||||||||||||||||| ||||| || ||||||||||    
T  17537049 tggagtaactctttagagttacttttggagtcaatat 17537013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 16386265 - 16386362
Alignment:
Q  117 acatgattattaataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagtcaa 214  Q
    |||||||||||||||||  | |||  |||||||||  ||| ||||||||| |||| ||  ||| ||||||||||||||||| ||||||||||||||||    
T  16386265 acatgattattaataagacttaaacgtagtccattggattaaaataaattcaaggatggaaatttggagtaactctttagagttactcttagagtcaa 16386362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 214
Target Start/End: Original strand, 1614857 - 1614955
Alignment:
Q  116 cacatgattattaataag-catcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagtcaa 214  Q
    |||||||||||||||||| ||| |||| |||||||||| ||| | |||||   || |||| | |||||||||||||||||||| |||||||| |||||||    
T  1614857 cacatgattattaataagacat-aaatgtagtccattagattaagataaaactaatggtggggatgtggagtaactctttagagttactcttggagtcaa 1614955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 133
Target Start/End: Complemental strand, 5216905 - 5216814
Alignment:
Q  42 aaaggtaaatattgatggagtcaaatgatgaaaattgtgattaatgtggtgagattggttaaggtaaatgaggtcacatgattattaataag 133  Q
    ||||||||||| |||| |||||||| |  |||||  || |||||| | |||| | |||||||||| |||||| |||||| ||||||||||||    
T  5216905 aaaggtaaataatgattgagtcaaaagtagaaaacggtaattaatattgtgaaaatggttaaggtgaatgagatcacattattattaataag 5216814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 214
Target Start/End: Complemental strand, 39772125 - 39772027
Alignment:
Q  116 cacatgattattaataag-catcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagtcaa 214  Q
    |||||||||||||||||| ||| |||| |||||||||| ||| | |||||   || |||| | ||||||||||||||||| || |||||||| |||||||    
T  39772125 cacatgattattaataagacat-aaatatagtccattagattaagataaaactaatggtggggatgtggagtaactcttttgagttactcttggagtcaa 39772027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 217
Target Start/End: Original strand, 39772675 - 39772776
Alignment:
Q  116 cacatgattattaataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagtcaat 215  Q
    |||||||||||| |||||  | |||| || ||||||| ||| ||||||| | || ||||   |||||||||||||| |||||  ||||||| ||||||||    
T  39772675 cacatgattattgataagacttaaatgtaatccattagattaaaataaaattaaaggtggagatgtggagtaactccttagagctactcttggagtcaat 39772774  T
Q  216 at 217  Q
    ||    
T  39772775 at 39772776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 48518554 - 48518615
Alignment:
Q  103 aggtaaatgaggtcacatgattattaataagcatcaaatctagtccattaaatttaaataaa 164  Q
    ||||| ||||| |||||| ||||||||||||  | ||||||| ||||||||||||| |||||    
T  48518554 aggtagatgagatcacattattattaataagacttaaatctaatccattaaatttagataaa 48518615  T

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Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 19990320 - 19990284
Alignment:
Q  181 tggagtaactctttagacttactcttagagtcaatat 217  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  19990320 tggagtaagtctttagacttactcttggagtcaatat 19990284  T

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Target: chr8 (Bit Score: 44; Significance: 3e-16; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 18684394 - 18684315
Alignment:
Q  138 aaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagtcaatat 217  Q
    |||| |||| ||||||||||| ||||| || |||||||| ||||||||||||| |||||||||| |||| ||||||||||    
T  18684394 aaatttagttcattaaatttagataaaatggagggtgaggatgtggagtaactttttagacttattcttggagtcaatat 18684315  T

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Target: chr8; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 18729959 - 18729880
Alignment:
Q  138 aaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagtcaatat 217  Q
    |||| |||| ||||||||||| ||||| || |||||||| ||||||||||||| |||||||||| |||| ||||||||||    
T  18729959 aaatttagttcattaaatttagataaaatggagggtgaggatgtggagtaactttttagacttattcttggagtcaatat 18729880  T

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Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 8843938 - 8843889
Alignment:
Q  115 tcacatgattattaataagcatcaaatctagtccattaaatttaaataaa 164  Q
    ||||||||||||||||||| || |||||||||||| |||||||| |||||    
T  8843938 tcacatgattattaataagaattaaatctagtccactaaatttagataaa 8843889  T

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Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 214
Target Start/End: Complemental strand, 42269476 - 42269378
Alignment:
Q  116 cacatgattattaataag-catcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagtcaa 214  Q
    |||||||||||||||||| ||| |||| |||||||||| ||| | |||||   || |||| | ||||||||||||||||| || |||||||| |||||||    
T  42269476 cacatgattattaataagacat-aaatgtagtccattagattaagataaaactaatggtggggatgtggagtaactcttttgagttactcttggagtcaa 42269378  T

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Target: scaffold0548 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0548
Description:

Target: scaffold0548; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 214
Target Start/End: Complemental strand, 6997 - 6899
Alignment:
Q  116 cacatgattattaataag-catcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagtcaa 214  Q
    |||||||||||||||||| ||| |||| |||||||||| ||| | ||||| | || |||| | ||||||||||||||||| || |||||||| |||||||    
T  6997 cacatgattattaataagacat-aaatgtagtccattagattaagataaaattaatggtggggatgtggagtaactcttttgagttactcttggagtcaa 6899  T

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Target: scaffold0548; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 217
Target Start/End: Original strand, 7587 - 7688
Alignment:
Q  116 cacatgattattaataagcatcaaatctagtccattaaatttaaataaattgaagggtgagaatgtggagtaactctttagacttactcttagagtcaat 215  Q
    |||||||||||| |||||  | |||| || ||||||| ||| ||||||| | || ||||   |||||||||||||| ||||| |||||||| ||||||||    
T  7587 cacatgattattgataagacttaaatgtaatccattagattaaaataaaattaaaggtggagatgtggagtaactccttagagttactcttggagtcaat 7686  T
Q  216 at 217  Q
    ||    
T  7687 at 7688  T

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